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1934 commits

Author SHA1 Message Date
Dan Stillman
536244c277 Local API: Decode + as a space in form-encoded requests
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File uploads that encoded spaces as + were stored with literal +
characters in the filename.

https://forums.zotero.org/discussion/134038/

(cherry picked from commit 9cbba8c4d2)
2026-10-06 11:34:49 -04:00
Dan Stillman
4d4c2c1412 Clear MDPI's Akamai bot challenge during Find Full Text
MDPI serves a JS proof-of-work interstitial in place of the article
page, so Find Full Text found nothing. Run the challenge in a hidden
browser when a page's meta refresh points to a registered challenge
host, then retry the page.

Also match meta refresh URL= case-insensitively, since MDPI's is
uppercase, and bound meta refreshes by the redirect limit.

https://forums.zotero.org/discussion/132837/
https://forums.zotero.org/discussion/134079/

(cherry picked from commit 09c3c8cd3d)
2026-10-06 10:51:37 -04:00
Dan Stillman
7b26a1a3fc Don't stall the Find Full Text queue on a failing download
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A file URL returning a server error was retried for up to an hour inside
the download, and a 429 or Retry-After was waited out there too. Since
the queue processes one item at a time, that blocked every other
selected item. Throttling now goes to Find Full Text's own per-domain
handling, as it did before 10.0, which also needed to read Retry-After
from a fetch Response and parse HTTP-date values.

https://forums.zotero.org/discussion/133703/

(cherry picked from commit cdf10bf62b)
2026-10-05 15:34:53 -04:00
Dan Stillman
a72ffd6549 Don't retry failing custom Find Full Text resolvers
A custom resolver returning a 429/5xx inherited Zotero.HTTP's default
retry policy, which could cause the whole queue to stall for up to an
hour -- or indefinitely for a Retry-After -- on a dead resolver, despite
the 5-second timeout on the request.

https://forums.zotero.org/discussion/133642/

(cherry picked from commit 9b769d3987)
2026-10-05 15:34:46 -04:00
Dan Stillman
f590efa63e Send cookies and Referer from HTTP.download()
Since the switch to fetch() in 0fe31b0f04 (Zotero 10.0.0), download
requests didn't use cookies, and the Referer header was silently dropped
as a forbidden header. Sites that check either -- e.g., IEEE Xplore,
which returns a 502 -- failed during Find Full Text.

https://forums.zotero.org/discussion/133703/

(cherry picked from commit 364181f4e7)
2026-10-05 14:19:45 -04:00
Dan Stillman
d31051f85b Don't match an item by a trashed child item in a search
A condition that matched a child item in the trash rolled up to its
parent when the search had a top-level (or other ancestor) result level,
or when "Include parent and child items of matching items" was checked.

https://forums.zotero.org/discussion/133836/
(cherry picked from commit d7751b93d8)
2026-09-29 11:40:57 -04:00
Dan Stillman
e775ded6aa Await saving of recognized parent item before moving attachment under it
A standalone PDF recognized by ISBN wasn't moved under the new parent
item, because the move was attempted before the item had been saved
and had an ID.

https://forums.zotero.org/discussion/133957/
(cherry picked from commit ebdc1287ac)
2026-09-29 11:40:53 -04:00
Dan Stillman
618341963d Local API: Fix object writes with API-client-supplied keys
Requests that included a key got a 400 with `'primaryData' not
loaded for item`

(cherry picked from commit 22a26bb483)
2026-09-23 13:29:46 -04:00
Dan Stillman
80bc5565e0 Pass a temp copy of dragged attachment files on Windows
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Allowing only 'copy' for file attachment drags kept File Explorer from
moving files out of 'storage' but locked the cursor at '+' even for
moves within Zotero. Instead, provide the file via a flavor data
provider that copies it to the temp directory when a target asks for it,
so the drag can allow 'copyMove' again and Explorer's move only touches
the copy. A copy's directory is removed once Explorer has moved the file
out of it, at the next drag, or with the temp directory at shutdown.

(cherry picked from commit acc4fd5ad2)
2026-09-16 22:44:29 -04:00
Dan Stillman
c59734e974 Fix dragging file attachments to and from parent items on Windows
Since 56eb77b704, drags of file attachments allow only 'copy' so that
File Explorer doesn't move the file out of storage, but the trees set
dropEffect to 'move' in onDragOver() for drops within Zotero, and OLE
refuses a drop whose dropEffect isn't among the drag's allowed effects.
Have setDropEffect() fall back to an allowed effect and have onDrop()
act on the effect the tree chose, kept in
Zotero.DragDrop.currentDropEffect, rather than on the drop event's
dropEffect.

https://forums.zotero.org/discussion/133765/
(cherry picked from commit bdb656ad5c)
2026-09-16 22:44:29 -04:00
Dan Stillman
b7a1d6c2bf Fix WebDAV auth for passwords containing '%' followed by two hex digits
fd812070b6 made _parseURI() decode the URL credentials so that
download() could build its own Basic Auth header from the decoded
values, but request() passed the decoded credentials to xmlhttp.open(),
which percent-decodes them again, so a password like "example%41pass"
was sent as "exampleApass". Re-encode the credentials before passing
them to open().

Fixes #6048

(cherry picked from commit 1d4b8bc89a)
2026-09-16 10:07:21 -04:00
Dan Stillman
2b36770f40 Handle overlong filenames in getClosestDirectory()
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relinkAttachment() calls getClosestDirectory() before showing the file
picker, and a too-long filename caused the OS.File.stat() in
getClosestDirectory() to throw, which prevented the file picker from
appearing after clicking Locate.

https://forums.zotero.org/discussion/133685/

(cherry picked from commit ab34e9031a)
2026-09-10 10:15:33 -04:00
Dan Stillman
f9624af1b6 Start HiddenBrowser loads from the parent process
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Firefox ESR 140.15 rejects loads from a content process for URLs that
process couldn't load on its own, including blob: URLs created by chrome
code. Full-text indexing loads HTML attachments through such a URL, so
indexing crashed Zotero with "Illegal load attempt of blob: URL from
web". Loads started by the parent are exempt, so start the load there
and use the child actor only to disable content retargeting.

https://forums.zotero.org/discussion/133661/

(cherry picked from commit e03920890a)
2026-09-08 17:15:24 -04:00
Dan Stillman
9244cbe50a Detect database corruption reported by a transaction's commit
We only ever checked for corruption errors from transactions in
queryAsync(), so a corruption error raised by the COMMIT that mozStorage
runs itself bypassed the check. A 10.0 schema upgrade -- which heavily
exercises the database -- that failed due to corruption showed "Database
upgrade error" and a single Sqlite.sys.mjs frame instead of the prompt
offering to restore from a backup.

Two users reported this, but it's not clear what triggered it --
corruption usually occurs during a statement, which we did catch. There
may have been some statement transaction whose corruption error was
caught and ignored rather than being left to abort the transaction,
causing SQLite to then block the commit. That's what the test does, and
it fails without the fix.

https://forums.zotero.org/discussion/133611/

(cherry picked from commit bdaecbb5cc)
2026-09-08 16:18:39 -04:00
Dan Stillman
a5b4b4d20d Tell the user to set up syncing again if credentials can't be decrypted
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If the keystore's secret is replaced -- say, after a keyring reset --
the stored value won't be able to be decrypted again, so tell them to
try logging in again instead of trying to fix their keyring.

https://forums.zotero.org/discussion/133603/

(cherry picked from commit fc17dcd24a)
2026-09-04 18:13:27 -04:00
Dan Stillman
d62b044386 Shim removed selection methods when a single row is selected
Plugins written for earlier versions call methods like
CollectionTree#getSelectedSearch(), which now throw. We did this
intentionally to make old code more obviously broken, even with single
selection, so developers would fix their code, but we're not yet
blocking plugins that illegitimately declared compatibility with a
future version, so some haven't been updated and are breaking Zotero.
With a single row selected, the pre-10 functions can technically
continue to work, so for now, restore them and just warn and name the
plugin instead of throwing. They still need to throw if multiple rows
are selected, since plugins that haven't been updated can't safely act
on a selection that might span collections or libraries.

https://forums.zotero.org/discussion/133565/

(cherry picked from commit 5697ee0af7)
2026-09-02 22:20:46 -04:00
Dan Stillman
f908bcadfa Fix "false" in Added By/Modified By columns for trashed collections
The row values were computed with `row.isItem && …`, so collection and
search rows in the trash got the boolean `false`, which the table then
rendered as the text "false".

https://forums.zotero.org/discussion/133560/

(cherry picked from commit 08ed64f17f)
2026-09-02 12:18:47 -04:00
Dan Stillman
ec128e020a Fix sync error due to invalid attachment filename
A stored-file path of 'storage:/' -- left behind by the 128 schema step,
which skipped paths with no basename -- triggered an
NS_ERROR_FILE_UNRECOGNIZED_PATH that aborted the whole
checkForUpdatedFiles() loop, so no files synced in the library. Skip an
attachment that throws instead of failing the whole library.

Also apply the setter's directory-path rule in getFilePath[Async]() to
avoid errors elsewhere.

https://forums.zotero.org/discussion/133523/synchronize-issue

(cherry picked from commit 661843b03f)
2026-09-01 22:57:41 -04:00
Dan Stillman
b66bf5198f Show recently used collections in the Add to Collection menu
Collections are now tracked as they're selected, added to, or dropped
on, and the five most recent usable targets are listed above the
full collection hierarchy by full path.

(cherry picked from commit 631a0e3081)
2026-09-01 22:01:58 -04:00
Dan Stillman
36dc88ce08 Fix error using a CSL 0.8 style
transformToDocument() needs a load group, which it takes from the source
document or from the window that created the XSLTProcessor. Neither of
those has existed since 0f2690eb75 in Zotero 8 stopped taking
XSLTProcessor from the hidden window, so the CSL 0.8 → 1.0 upgrade threw
NS_ERROR_FAILURE. In Word, this showed as "Zotero encountered an error
while updating your document."

https://forums.zotero.org/discussion/133543/

(cherry picked from commit 4a8a88dd41)
2026-09-01 15:49:23 -04:00
Dan Stillman
501ecc895c Fix the startup error shown when the database can't be written to
Regression from b27c4cb023 in 10.0, which added pragma commands that
write to the database. If those failed because the database was
read-only, we would show a raw SQLite error instead of the message about
permissions.

https://forums.zotero.org/discussion/133521/error-for-zotero-10-for-mac

(cherry picked from commit 984a72a3d9)
2026-08-31 14:29:58 -04:00
Dan Stillman
b18ecd3310 Revoke the server API key if it can't be stored locally
The login session creates a key on the server before we try to store it,
so each attempt that failed to save the key left an active key behind.

(cherry picked from commit 30425e024d)
2026-08-31 12:43:47 -04:00
Dan Stillman
cc408d0a72 Report the real cause of an OS keystore failure
Every failure shows "User canceled OS unlock entry" no matter what went
wrong. Test the store for the actual state, and give callers a message
describing what couldn't be accessed.

(cherry picked from commit ace9fa0227)
2026-08-31 12:43:47 -04:00
Dan Stillman
799c05c598 Don't show credential dialogs during automatic syncs
Both the keystore fallback prompt and the migration alert are reachable
from the credential read paths that a sync uses, so don't show if it's
an automatic sync.

(cherry picked from commit 57c8c81872)
2026-08-31 12:43:47 -04:00
Dan Stillman
89a24224c0 Fall back to saving credentials without OS keystore encryption
Some Linux systems have no Secret Service running, and if users can't
change that (e.g., a managed system), storing an API key fails and login
never completes. Offer to store credentials unencrypted instead, and try
to encrypt them on a later read if the keystore becomes usable.

https://forums.zotero.org/discussion/133418/

(cherry picked from commit 892898040b --
with modifications, since 10.0's login manager calls are synchronous)
2026-08-31 12:43:21 -04:00
Dan Stillman
32be699862 Fix WebDAV downloads with non-ASCII characters in the password
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HTTP.download() built the Basic auth header with btoa(), which throws
on code points above 255, so every file download failed immediately
with a TypeError. Requests that go through XMLHttpRequest were
unaffected, since Necko builds the header itself, UTF-8 encoded.

https://forums.zotero.org/discussion/133454/synchronization-error-after-upgrading-to-10-0-1

(cherry picked from commit 3b93d33b35)
2026-08-27 10:53:47 -04:00
Dan Stillman
6befe6827d Fix corruption of non-ASCII characters in encrypted credentials
Mozilla's OSKeyStore.encrypt() encodes the string as UTF-8 before
encrypting, but its decrypt() returns the decrypted bytes as a binary
string without decoding them, so a WebDAV password containing non-ASCII
characters came back mojibake and authentication failed.

https://forums.zotero.org/discussion/133465/problem-login-into-webdav-server-with-10-0-1

(cherry picked from commit 0c9ba2d05c)
2026-08-27 10:53:44 -04:00
Mynacol
08f3e1e5dd Use versioned libc.so instead of /bin/ln on Linux (#6030)
* Fix js-ctypes-based symlinking on Linux by using `libc.so.6` instead of `libc.so` in `OS.File.unixSymlink()` and `Zotero.File.createSymlink()`
* Use that instead of `/bin/ln`, which doesn't exist on NixOS
* Replace `/bin/ln` with `Zotero.File.createSymlink()` in symlinked-database test

---------

Co-authored-by: Dan Stillman <dstillman@zotero.org>

(cherry picked from commit d153397151)
2026-08-27 10:53:42 -04:00
Dan Stillman
a5bff10865 Don't use FSEvents when storage isn't on a local volume
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FSEvents is backed by a per-volume journal that only local volumes
have. On a network mount the stream is created and started
successfully but never delivers events, so the watcher would report
that nothing had changed for as long as it was used. Check the volume
with statfs() and fall back to scanning.

(cherry picked from commit 5d20c692e8)
2026-08-26 10:37:48 -04:00
Dan Stillman
1ee75da2f7 Fix locally missing attachments never being downloaded
Since f21e1b2d32, a full local file scan no longer runs periodically and
on every manual sync, so locally missed attachments stayed marked for
upload and were skipped as unavailable instead of being downloaded.
"Reset File Sync History" marked every attachment for upload, including
files that had never been downloaded, so the forced download check added
in 404fc41b88 found nothing to download.

Missing files are now marked for download when the upload queue is
filled, and in at-sync-time mode they're downloaded in the same sync.
The reset marks them for download directly, and downloads are no longer
skipped just because there were no remote storage changes.

https://forums.zotero.org/discussion/133414/
(cherry picked from commit a1ea7037c2)
2026-08-26 10:37:44 -04:00
Dan Stillman
50976f4bbd Retry note saves that time out waiting for the database
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Any error while saving a note prompted the user to restart Zotero, even
a transaction timeout caused by a long-running operation elsewhere.
Nothing has been written when the wait times out, so retry, unless newer
note content has been handed to the editor in the meantime.

https://forums.zotero.org/discussion/133298/

(cherry picked from commit f2a42bec15)
2026-08-21 16:43:29 -04:00
Dan Stillman
e192f10672 Don't hold the database to optimize the full-text index
Editing a note flagged it stale, and the background drain indexed it and
then ran an FTS5 'optimize' -- a single statement that rewrites the
content index and can hold the shared database for over a minute --
because the queue was empty again. Note saves waiting on the connection
hit the transaction timeout and told the user to restart Zotero.

Merge the index in bounded steps instead, so no statement runs long
enough to keep other queries waiting, and only after enough items have
been indexed to be worth it.

https://forums.zotero.org/discussion/133298/

(cherry picked from commit 070ae8b615)
2026-08-21 16:41:17 -04:00
Dan Stillman
95a6d8821e Fix Any Field searches at a non-item result level
Any Field expands to a generic 'field' condition, which the cross-level
code treated as matching only on top-level items. At an attachment
result level it therefore matched attachments whose parent item had the
value, instead of attachments with the value themselves. Since the
condition stands in for every field, it's now treated as matching at any
level those fields live at.

(cherry picked from commit ad98e84d24)
2026-08-21 12:56:53 -04:00
Dan Stillman
8bc2d48319 Don't prompt to save an unchanged saved search
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https://forums.zotero.org/discussion/133302/zotero-10-questions-about-search
(cherry picked from commit 0ee3e4052e)
2026-08-20 15:40:08 -04:00
Dan Stillman
8d68f6cb89 Skip symlink tests on filesystems without symlink support
CIFS mounts can't create real symlinks without special mount options,
so skip the symlinked-database and broken-symlink tests when a created
symlink doesn't exist or isn't visible as one.

(cherry picked from commit 4e532a17a2)
2026-08-19 09:41:57 -04:00
Dan Stillman
59a3568213 Fix database access on network filesystems on macOS and Linux
On macOS, SQLite chooses locking methods based on the filesystem
containing the database, and network filesystems (e.g., SMB, NFS),
read-only volumes, and filesystems without byte-range locking get
methods without shared-memory support, which WAL requires. Opening a
database with an adjacent WAL file on those crashes -- Mozilla's VFS
wrapper hides the missing shared-memory methods from SQLite's WAL
support check -- so the first Zotero 10 run converted the database to
WAL and every launch after that segfaulted during connection
initialization.

On macOS, mirror SQLite's method selection and use a rollback journal
when shared memory isn't available, converting an existing WAL database
before opening it: an empty WAL by reverting the header format versions
in place, and a non-empty WAL by replaying it into a temporary copy on
local disk that replaces the database file only after passing an
integrity check. A WAL file next to an already-converted database
(e.g., from an interrupted conversion) goes through the same
conversion. Also use openNotExclusive during integrity checks and
corruption recovery, which otherwise fail on SMB shares with an I/O
error from the exclusive open lock.

This corrects 22055d92b7, which passed openNotExclusive on all
platforms for an open failure described as affecting macOS and Linux,
and expected locking_mode=EXCLUSIVE to keep the WAL index in heap
memory with no -shm file. Neither claim held up: mozStorage opens the
WAL while initializing the connection, before any pragma can run, so
the index uses shared memory unless the exclusive VFS is in use, and
the exclusive open works on Linux CIFS mounts -- where non-exclusive
access instead made SQLite's lock-upgrade sequence trip over the SMB
byte-range lock mapping, leaving startup hung and the database never
created. So pass openNotExclusive only on macOS. On Linux this restores
unix-excl, which performs all locking under a single held lock and
keeps the WAL index in heap memory; Windows has no distinct exclusive
VFS and is unaffected.

https://forums.zotero.org/discussion/133258/

(cherry picked from commit bba85a3939)
2026-08-18 17:24:44 -04:00
Maximilian Schmidt
a1be174c28 Fix zero local data object versions (#6016)
(cherry picked from commit b8fdee865a)
2026-08-13 11:23:49 -04:00
Dan Stillman
443a5825ba Fix leading space in creator autocomplete values
the all-creators mode (fieldmode 2) concatenated
firstname || ' ' || lastname, so a two-field creator without a first
name produced ' last', which advanced search fields inserted with the
space.

(cherry picked from commit c87328ada9)
2026-08-07 11:04:50 -04:00
Dan Stillman
ec5419f80e Search: Allow binding a group whose conditions match at any level
Binding is meaningful for a condition that matches at every level -- a
tag bound to an attachment means the tag is on the attachment -- but a
group carrying one lost the binding as soon as the search was
serialized, so "items with an attachment tagged foo" couldn't be built.

(cherry picked from commit 9da57a9fe3)
2026-08-05 15:15:03 -04:00
Adomas Venčkauskas
9c03a93e00
Fix tree multi-selection collapse/expand behaviour (#5983)
Closes #5974.

Additional fixes for broken item tree behaviour when multiple items are
selected, and changing focus with ctrl/cmd-arrow keys.

Aligned Collection Tree/Virtualized Tree collapse/expand behaviour when
multiple containers are selected, one of them is focused, and arrow key
left-right is pressed, to the behaviour in Item Tree - now all of them
are collapsed/expanded.

---------

Co-authored-by: Dan Stillman <dstillman@zotero.org>
2026-07-31 13:25:01 -04:00
Martynas Bagdonas
a7cae87be8
Improve undo/redo in the note editor (#3398)
- Fix "redo" command not enabled in the note editor
- Centralize note editor undo and redo commands
- Update note editor submodule

Co-authored-by: Tom Najdek <tom@doppnet.com>
2026-07-31 14:22:53 +02:00
Dan Stillman
7abcf23ef7 Move PMC lookup after open-access lookup
The PMC lookup in #5906 was added before the OA lookup, but the OA
lookup often returns a PMC URL of its own (including, at least now, for
the DOI given in the PR), with a direct file URL rather than a page to
scrape, so try it first and fall back to the PMCID-derived URL only when
it turns up nothing.
2026-07-30 20:56:28 -04:00
Dan Stillman
8bebaf0ead Fix open-access lookup for PMCID items during in-app translation
Since #5906, the 'oa' resolver list can start with a plain URL object
for items with a PMCID, but _getOpenAccessPDFURLs() and
saveOpenAccessAttachment() called resolvers[0](), which threw for those
items -- skipping the lookup silently in the first case and failing the
save in the second.
2026-07-30 20:55:16 -04:00
Dan Stillman
9ed00c843d Don't update read status when using Show File
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Show File triggered a file 'open' notification, so revealing a file
moved its item to the top of Recently Read. Use a separate 'reveal'
event, which file syncing still observes to queue a modification check.

https://forums.zotero.org/discussion/133006/
2026-07-30 13:43:41 -04:00
Tom Najdek
c39f16891f Extend the template engine and add template validation (#5989)
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- Fix multiple potential scenarios causing a template engine crash
 - Add support for specifying string literals in the template engine
 - Validate `if/else/elseif` order and matching clause closures
 - Validate to ensure every `{{` is properly closed with a matching `}}`
 - When a template is invalid, display a warning, do not offer batch-renaming tools, do not update synced setting
 - When a template is invalid, prompt the user to fix or reset the template when

Closes #5965
2026-07-29 13:30:12 -04:00
Tom Najdek
efcfaec5d4 Move templating engine to a standalone, lazy-loaded module (#5989) 2026-07-29 13:30:03 -04:00
Dan Stillman
dc6d55a137 Remove collectionTreeRow from the plugin menu context
Menu plugins reading it acted on one arbitrary row of the selection.
Reading it now throws and names collectionTreeRows, which the context
has already provided since multi-collection selection landed.

The context now copies property descriptors rather than values, since
copying values would evaluate the throwing collectionTreeRow getter for
every menu.
2026-07-29 13:22:58 -04:00
Dan Stillman
783da0e66e Don't offer Remove from Collection if saved search is selected
Collections and saved searches can be selected together, and the
search's items don't need to be in any of the collections, which would
result in search-only items being moved to the trash.
2026-07-29 13:12:47 -04:00
Dan Stillman
1d97f6448e Replace ItemTree#collectionTreeRow with a validated view mode
The view-wide branches (trash, duplicates, feeds, Recently Read) read
the first selected row, which multi-collection selection preserved with
a getter rather than updating. setCollectionTreeRows() now derives the
kind of view the selection adds up to, throwing if the rows disagree,
and those branches test it.
2026-07-29 13:12:47 -04:00
Dan Stillman
5d1a2cba32 Remove the singular collection tree selection getters
Multi-collection selection left .collectionTreeRow and similar in place
to reduce breakage, but that would just leave plugins and other callers
potentially broken when multiple rows were selected. All singular
getters now throw and say what to use instead. getSelectedLibraryIDs()
was added to replace getSelectedLibraryID().
2026-07-29 13:12:47 -04:00