Merge main into feat/php-laravel-support, resolving conflicts in:
- csv-generator.ts: add description column to streaming CSV architecture
- kuzu-adapter.ts: add description to COPY queries and insert/merge ops
- schema.ts: add description STRING to all code element tables, FROM Method TO Property
- parse-worker.ts: integrate PHP built-ins and Eloquent extraction with sub-batch worker
- import-processor.ts: integrate PHP PSR-4 resolution with ImportResolutionContext
- package-lock.json: regenerate from main's 1.3.3 base with tree-sitter-php
Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
2MB limit caused FTS crash on large codebases. 512KB is safe and only
skips generated/vendored files.
Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
- Raise MAX_FILE_SIZE from 512KB to 2MB to capture more real source files
- Replace verbose per-warning output with single summary line
- Soften skip message wording ("likely generated/vendored")
Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
Skill folder names determine invocation paths in Claude Code plugins
(e.g. plugin:gitnexus:gitnexus-cli). Generic names like "cli" or
"debugging" could collide with other plugins, so prefix them all with
gitnexus- for clarity.
Updated across plugin dirs, main package source files, ai-context.ts
generator, setup.ts installer, and all CLAUDE.md/AGENTS.md routing tables.
Skill names should match folder names since the plugin namespace
(gitnexus:) already provides context. Avoids redundant display like
gitnexus:gitnexus-cli → now gitnexus:cli.
- Fix imports from eval.agents/eval.environments to relative (agents/environments)
- Add hatch wheel config for correct package discovery
- Extract git diff patch from container for SWE-bench submission
- Use sys.executable instead of hardcoded "python" for venv compat
- Upgrade claude-haiku config to 4.5
- Add minimax-m2.1 model config
Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
- Impact tool now returns risk score, affected processes/modules, and summary
- Cypher tool formats results as markdown tables for LLM readability
- Context tool includes module (functional area) field
- Semantic search skips model init when embeddings are disabled
- Setup: wrap npx in cmd /c on Windows for .cmd script compatibility
- Embedder: silence stderr during ONNX model load to protect MCP stdio
- API: use executeCypher directly to avoid double formatting
- Add community integrations section to READMEs
Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
Bundle MCP server config (.mcp.json), fix hook to use spawnSync with npx
fallback and read stderr (KuzuDB stdout workaround), wire plugin.json with
hooks/mcpServers paths, add guide skill with tools/resources/schema reference,
add AMP-compatible mcp.json to all skill dirs, and slim CLAUDE.md generator
by moving reference content into the guide skill.
Laravel projects commonly use traits (HasFactory, SoftDeletes, etc.) on classes
and methods that reference model properties. These relation pairs were missing
from the CodeRelation table, causing edges to be dropped during indexing.
Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
- Add description STRING column to all code element schemas (Function, Class,
Interface, Method, CodeElement, and all CODE_ELEMENT_BASE types including Property)
- Add generateMultiLangNodeCSV() to write Struct, Enum, Trait, Property, etc.
nodes to KuzuDB (previously they existed in-memory only, never reached the DB)
- Update generateAllCSVs() to generate CSVs for all 19 multi-language types
- Fix getCopyQuery() to use correct column list per table type:
- Multi-language tables: id,name,filePath,startLine,endLine,content,description
- Core tables: id,name,filePath,startLine,endLine,isExported,content,description
- Update batchInsertNodesToKuzu and insertNodeToKuzu to include description field
Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
- Replace static_call_expression -> scoped_call_expression (php_only name)
- Replace class_implements -> class_interface_clause
- Use [(name) (qualified_name)] alternatives in heritage patterns to match
both simple names (Controller) and fully-qualified names (App\Models\User)
All patterns verified against tree-sitter-php node-types.json and live parse.
Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
- Copy tree-sitter-php_only.wasm to public/wasm/php/tree-sitter-php.wasm
- Register PHP WASM path in web parser-loader languageFileMap
Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
Add tree-sitter-php ^0.23.0 to gitnexus/package.json. Package exports
{ php, php_only } grammars; we use php_only for pure PHP files.
Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
Uncomment PHP = 'php' in both CLI and web SupportedLanguages enums.
Add .php, .phtml, .php3/.4/.5/.8 extension detection to getLanguageFromFilename()
in both packages.
Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
SingleBar from cli-progress doesn't have a .log() method (that's
MultiBar-only), causing a crash when any code calls console.log
during the pipeline.
Fixes#53
Thanks to @TranDatk for reporting in #56.
Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
Worktree directories were committed as gitlink submodule references,
causing CI failures during checkout. Remove them from tracking and
add .claude/worktrees/ to .gitignore to prevent recurrence.
Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
Add public executeCypher(repoName, query) method to LocalBackend,
bypassing the callTool string dispatch and resolving the repo handle
directly. Update buildGraph in api.ts to call it instead of going
through callTool('cypher', ...) on every query.
- Add https://gitnexus.vercel.app to CORS allowed origins so the
deployed site can connect to the local backend server.
- Replace naive createHttpTextSearch (substring matching via Cypher)
with createHttpHybridSearch that calls /api/search for full
BM25 + semantic + RRF hybrid search on the server.
- Set isEmbeddingReady to false in backend mode (no local embedder),
which also fixes {{QUERY_VECTOR}} handling — the existing error
path in tools.ts now correctly returns a helpful message.
- Set isBM25Ready to true (available via server's hybrid search).
- Removes the Cypher injection bug (wrong escape char) since the
function that contained it was replaced entirely.
Add HTTP wrapper functions (executeQuery, textSearch) to the ingestion
worker and a new initializeBackendAgent method that creates the agent
with HTTP-backed tool closures instead of local KuzuDB. useAppState
detects backend mode and routes agent initialization accordingly.
The WASM worker DB is never initialized in backend mode, so
startEmbeddings() now returns early. Also hides the embedding
status button in the header when using the local backend.
- Fix field name mismatch in /api/repo (repoPath -> path)
- Add setProgress(null) on successful backend repo load
- Prevent DropZone tab auto-switch from re-triggering
- Make isDatabaseReady() return true in backend mode
- Increase fetchGraph timeout to 60s for large repos
- Replace dynamic import with static import for runCypherQuery
Replace direct single-repo KuzuDB access with LocalBackend, the same
backend the MCP server uses. The serve command now works with ALL
indexed repos via the global registry instead of only the CWD repo.
New/updated endpoints:
- GET /api/repos (list all indexed repos)
- GET /api/repo?name=X (repo metadata)
- GET /api/graph?repo=X (full knowledge graph)
- POST /api/query (raw Cypher via backend)
- POST /api/search (process-grouped search via backend)
- GET /api/file?repo=X&path=Y (file read with path traversal protection)
- GET /api/processes?repo=X, /api/process?repo=X&name=Y
- GET /api/clusters?repo=X, /api/cluster?repo=X&name=Y
