Commit graph

1903 commits

Author SHA1 Message Date
Dan Stillman
1ff2f640eb Remove Zotero for Firefox data directory migration code
The new-install branch in DataDirectory.init() read prefs.js from the
default Firefox profile to detect a pre-2017 dataDir setting, and the
read was unwrapped, making prefs.js access errors fatal at startup [1].
We could add a try/catch, but after nine years, it's probably safe to
just remove the migration. If anyone is returning from >9 years in the
wilderness and they still want old unsynced Zotero data, they can
manually move their data to the default location.

[1] https://forums.zotero.org/discussion/131176/installation-error-accessing-mozillas-pref-js-see-msg-pls
2026-04-27 16:04:52 -04:00
Adomas Venčkauskas
777d01b5c2 Item Tree: Column visibility logic improvements
Columns now have properties: `enabledIn`, `disabledIn` and `defaultIn`,
corresponding to column picker availability and default visibility. The
properties now filter based on attached collection view type instead of
visibilityGroup.

Visibility groups are for views where we want distinct column sets to
persist, like the feeds view.

Collection type properties are used to specify which columns are
available for a given type, regardless of whether it's in a different
visibility group or not.
2026-04-27 14:44:39 -04:00
Adomas Venčkauskas
5ca1fbb167 Item tree refactor megacommit
Split ItemTree megaclass into:
- ItemTree - concerned with drawing the virtualized table container and
  column interaction
- ItemTreeRowProvider - provides rows and issues notifications for
  render updates
- ItemTreeRow and subclasses - contains row-specific data and rendering
  logic
- CollectionViewItemTree and its accompanying classes - a version of
  ItemTree that renders items attached to a given Collection or
  CollectionView (CollectionTreeRow).

Various improvements in logic and rendering, separation of concerns.
2026-04-27 14:44:39 -04:00
Abe Jellinek
d7920e320b cookieContextId -> userContextId 2026-04-23 15:34:28 -04:00
Abe Jellinek
f0474fa250 Add support for clearing challenge in browser during translation 2026-04-23 15:34:28 -04:00
Adomas Venčkauskas
9abd13fd22 Fix ZoteroPane tests failing intermittently 2026-04-22 10:16:05 +03:00
Dan Stillman
c52a6151dc Fix ZoteroPane.viewAttachment() tests after HTTP.download() rewrite
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2026-04-17 15:36:21 -04:00
Dan Stillman
ce424c6b67 Fix attachment tests after HTTP.download() rewrite
Add a spy on Zotero.HTTP.download and update call-count assertions to
split between request() and download() calls. Previously download()
delegated to request(), so a single requestStub tracked everything.
2026-04-17 15:21:25 -04:00
Abe Jellinek
cc76207a23
Remove CookieSandbox, add new utility for cookie isolation (#5853) 2026-04-17 14:23:04 -04:00
Tom Najdek
32e43cb8f1
Fix tag paste to include existing field text at cursor position (#5873) 2026-04-17 14:20:52 -04:00
Dan Stillman
0fe31b0f04 Rewrite HTTP.download() to stream via fetch() + ReadableStream
- Replace XHR-based download with fetch() + response.body streaming,
  writing chunks to disk via IOUtils instead of buffering the entire
  response in memory
- Separate out the retry and URL-parsing logic so it can be reused
  between request() and download()
- Split the ZFS download code into a request() with `followRedirects:
  false` to get the metadata headers and a separate download() to
  download the file

Fixes #5476, Downloading of large files is broken
2026-04-17 14:17:40 -04:00
Dan Stillman
c2c66795d2 Add some extra asserts to debug test flakiness in CI 2026-04-17 10:47:04 -04:00
windingwind
55672ba933
Fix removal logic for menu added by MenuManager (#5886)
Add the registered main key to menu class list so that they can be found when plugin is removed.
Add test for the fix.
2026-04-17 10:13:36 -04:00
Dan Stillman
d2d4451165 Fix WebDAV tests for Account pane rename
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2026-04-14 23:56:23 -04:00
Dan Stillman
a9fe8e3b62 Fix Account preferences tests
And update suite name
2026-04-14 22:46:37 -04:00
Dan Stillman
acfb7c7915 Rename zotero-prefpane-sync ID to zotero-prefpane-account
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2026-04-14 16:10:50 -04:00
Dan Stillman
7334080693 Rename sync preference files to account 2026-04-14 16:10:50 -04:00
Dan Stillman
56ef61e45b Store vacuum.lastTime as seconds, not milliseconds
Also drop the default pref, since this is just internal state
2026-04-13 12:39:51 -04:00
Dan Stillman
16b63a97dd Remove concurrent backup tests
These tested racing an offline backup against an in-progress online
backup, which wouldn't happen in practice (schema backups run at startup
before the idle observer, and someone is very unlikely to perform a DB
integrity check immediately after returning from an idle that triggered
a backup). The tests relied on fragile timing and a shared tmp file,
causing failures on Linux after the WAL checkpoint change. The tests
were already skipped on macOS after switching to APFS clones.
2026-04-10 13:35:57 -04:00
Dan Stillman
b27c4cb023 Enable SQLite WAL mode and add periodic VACUUM INTO
- Switch journal mode from DELETE to WAL for better write performance.
  With EXCLUSIVE locking mode, SQLite uses heap memory for the WAL
  index, avoiding an -shm file. Set synchronous=NORMAL (matching what
  Mozilla uses for Places). Checkpoint WAL on database close so the
  .sqlite file has all data (for copies or backups).
- Add periodic database compaction on idle (after DB backup) using
  VACUUM INTO and do an atomic file swap back to zotero.sqlite if no
  writes occurred during the operation. Check if vacuuming is needed
  based on time interval (default 14 days) and freelist ratio (default
  10% threshold).
- Disable auto_vacuum, which causes fragmentation and is unnecessary
  with periodic VACUUM
- Remove the VACUUM call from the integrity check, which was always just
  an awkward hack to let people trigger a VACUUM without having an
  explicit button

Closes #652
2026-04-10 13:19:32 -04:00
Dan Stillman
f82efc766d Fix Added/Modified By visibility when switching between library types
The `_getColumns()` column cache key didn't account for library type, so
switching between personal and group libraries reused cached columns
from the previous library type. This caused `groupLibrariesOnly` columns
(Added By, Modified By) to be missing in group libraries or incorrectly
shown in personal libraries.

Additionally, `VirtualizedTable.componentDidUpdate()` only recreated its
internal `Columns` object when the id prop changed, not when the columns
prop changed, so even with correct column rebuilding in `ItemTree`, the
table wouldn't pick up the new column list.

https://forums.zotero.org/discussion/130521/added-by-column-missing
2026-04-09 11:29:02 -04:00
Abe Jellinek
4b14ca9af4
Set Recently Read threshold relative to most recent item (#5878)
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And persist cutoff within session
2026-04-07 14:10:18 -04:00
Dan Stillman
3f0de027a2 Auto-resolve lastRead sync conflicts by picking the most recent value 2026-04-07 10:29:25 -04:00
Dan Stillman
67288047f3 Use APFS cloning for file copies on macOS
Add Zotero.File.copyFile(), which uses clonefile() on APFS with a
fallback to IOUtils.copy(), and use it for all significant file copies.
APFS is detected and cached for each parent folder via
Zotero.File.isAPFS(), which uses statfs().

On APFS, all database backups now use the offline (close/clone/reopen)
path instead of the SQLite online backup API. Cloning is nearly
instant, and backup files share disk blocks via copy-on-write, saving
potentially gigabytes of space.

Closes #5330
2026-04-03 14:33:21 -04:00
Dan Stillman
d5ee350081 Disable snapshot saving in feed item translation itest
To try to fix intermittent CI errors
2026-04-03 09:58:47 -04:00
Dan Stillman
5a347f4be5 Update style test for NLM/Vancouver style changes 2026-04-02 16:11:47 -04:00
abaevbog
c6a95fd5b7
citation dlg: fix CI test breakage (#5870)
- prevent the focus handler from resetting the cached
items in search handler
- wait for search to finish after changing dialog type
in "should not display empty note child rows" test
2026-04-02 11:27:43 -04:00
abaevbog
6f5f221db0
citation dlg: no irrelevant child rows in itemTree (#5863)
Pass filterChildItems to itemTree from citationDialog
to filter out unwanted child rows before adding them
in toggleOpenState.

In annotations mode, do not add child notes and
attachments without annotations
In add-note mode, only keep child notes that have content
2026-04-01 14:05:40 -04:00
Bogdan Abaev
0e7ed13a43 citation dlg: variable min-width for list/library
- Allow different min-width for list vs library layouts.
In library mode, we need at least 1000px to have a functional
itemTree, especially when sidepane is present. But for list
mode, 1000px is very wide, so min-width should be 800px.
Increased min-height of itemTree from 200px to 400px
- When the dialog closes, store the width/height of
the current dialog's layout. Then, when the dialog opens
next time in that layout, set window's width/height based on last saved
params. That way, one can open a citation dialog in list
mode at 800px, then open annotations dialog (always library mode)
at 1000px, and then have the citation dialog in list mode open
again at its intended 800px.
- If one switches from library to list mode, add a smooth
window resizing animation to shrink diagonally from current width
to 800px. If one switches from list to library mode,
window smoothly resizes to 1000px min-width. This is
not applied to linux where win resizing behavior is a bit jumpy.
2026-03-31 14:53:11 -04:00
Tom Najdek
f3ecf285b3
Fix flakiness in "should shift-tab across the zotero pane" test 2026-03-31 01:38:28 +02:00
Tom Najdek
2ad4618efb
Exclude ©, ®, and ™ from emoji detection regex 2026-03-29 17:51:27 +02:00
Abe Jellinek
fb8389d654
Read Aloud: Persist last-read position in synced setting (#5860) 2026-03-27 15:22:02 -04:00
Dan Stillman
391e8497a6 Handle per-object 403 on settings upload and reset to remote version
If the server returns a write report with 403 for admin-only settings,
mark successful settings as synced and reset rejected settings to
their remote values by re-downloading from the server.

Needed for #5862
2026-03-26 15:54:28 -04:00
Dan Stillman
0e8b195c5a Add tests for image annotation placeholder in notes 2026-03-24 12:09:15 -04:00
Dan Stillman
322b764091 Show email addresses in sync settings
Fetch emails from /keys response and login session result, persist them
in the local database, and display them in the sync settings for both
logged-in and logged-out-but-linked states.

Also unify the separate logged-out-linked and logged-in containers into
a single layout that toggles elements based on login state.

Requires dataserver and stream-server changes
2026-03-24 12:09:08 -04:00
Dan Stillman
5ac56ae717 Fix removing from Recently Read in read-only group libraries 2026-03-24 11:51:37 -04:00
Dan Stillman
2522be0c17 Add test for removing group item from Recently Read on settings sync 2026-03-24 11:36:43 -04:00
Dan Stillman
a3909af5ab Clear lastRead in Item#fromJSON() when absent from API response
When the server returns an attachment without lastRead (because it was
cleared), fromJSON was not clearing the local value since it only
processes fields present in the JSON. Add explicit check after field
processing to clear lastRead when absent.
2026-03-24 11:36:43 -04:00
abaevbog
81591eb890
ItemTree: + expands all rows one level at a time (#5797)
On + keypress, expand the rows down one level, instead of
expanding all rows at once. If some rows are expanded
and some are collapsed, expand to the deepest level
currently visible.
E.g. if some regular items are already expanded,
expand only remaining collapsed regular items. If there
is a row with expanded attachments, expand all rows.

On - keypress, collapse the rows up one level to be consistent.

https://forums.zotero.org/discussion/129596/optional-annotations-in-item-list
https://forums.zotero.org/discussion/130365/expand-all-shift-in-zoteros-behavior-changed
2026-03-23 15:25:30 -04:00
Bogdan Abaev
6bec3c817e Citation dialog: allow to insert annotations (#5356) 2026-03-23 15:00:22 -04:00
abaevbog
5823247df9
itembox: fix lost focus on tab from invalid DOI (#5856)
Fix lost focus on tab from DOI field after it is updated
from a valid to an invalid value.

https://github.com/zotero/zotero/pull/5850#discussion_r2976238955
2026-03-23 13:43:23 -04:00
Dan Stillman
fd7cc84f6b Fix quicksearch in Recently Read to match parent items
Add includeParents to the Recently Read search so parent items are
included in the search scope alongside their child attachments.
2026-03-23 11:22:01 -04:00
Abe Jellinek
8af91b0147
Bump lastRead when reader is closed (#5852) 2026-03-21 13:41:54 -04:00
Dan Stillman
ba3c3a506f Add test for preserving synced on lastRead setting download 2026-03-20 17:03:23 -04:00
Dan Stillman
eb3a136ccd Use new batch setting deletion API endpoint
Use DELETE /settings?settingKey=key1,key2 instead of individual DELETE
per key, with batching matching uploadDeletionBatchSize.
2026-03-20 15:43:03 -04:00
Dan Stillman
98d911f6b1 Add "Switch Accounts" flow for logged-out-but-linked state
When a user logs out without removing local data, the sync pane now
shows a third UI state with the linked username, a "Log In" button
(constrained to the same account), and a "Switch Accounts…" button
that shows a hard confirmation dialog requiring the user to type
"remove local data" before proceeding. On confirmation, local data
is reset and the app restarts, reopening the account preferences.
2026-03-20 13:11:52 -04:00
Dan Stillman
35713fefd0 Upload setting deletions during sync
Deleted settings were written to syncDeleteLog but never uploaded. Add
dedicated setting deletion upload in _startUpload() using individual
DELETE requests per setting, since the API doesn't support batch setting
deletion.
2026-03-20 11:25:27 -04:00
Dan Stillman
3ebd26acc0 Fix saving lastRead in read-only library from synced setting
The same skipEditCheck fix from 5dc9705294 but for the synced setting
handler, which updates lastRead when a lastRead setting arrives via
sync for a group attachment.
2026-03-20 11:25:27 -04:00
Dan Stillman
1d31ed2508 Fix sync runner test for updated login error button text 2026-03-19 15:48:16 -04:00
Dan Stillman
1502214b5d Web-based login flow
Replaces the login form with a "Log In" button that creates a dataserver
login session and opens the website for logging in. The client polls for
session completion every few seconds and also watches for a notification
from the streaming server.
2026-03-19 15:07:53 -04:00