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12821 commits

Author SHA1 Message Date
Dan Stillman
32be699862 Fix WebDAV downloads with non-ASCII characters in the password
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HTTP.download() built the Basic auth header with btoa(), which throws
on code points above 255, so every file download failed immediately
with a TypeError. Requests that go through XMLHttpRequest were
unaffected, since Necko builds the header itself, UTF-8 encoded.

https://forums.zotero.org/discussion/133454/synchronization-error-after-upgrading-to-10-0-1

(cherry picked from commit 3b93d33b35)
2026-08-27 10:53:47 -04:00
Dan Stillman
6befe6827d Fix corruption of non-ASCII characters in encrypted credentials
Mozilla's OSKeyStore.encrypt() encodes the string as UTF-8 before
encrypting, but its decrypt() returns the decrypted bytes as a binary
string without decoding them, so a WebDAV password containing non-ASCII
characters came back mojibake and authentication failed.

https://forums.zotero.org/discussion/133465/problem-login-into-webdav-server-with-10-0-1

(cherry picked from commit 0c9ba2d05c)
2026-08-27 10:53:44 -04:00
Mynacol
08f3e1e5dd Use versioned libc.so instead of /bin/ln on Linux (#6030)
* Fix js-ctypes-based symlinking on Linux by using `libc.so.6` instead of `libc.so` in `OS.File.unixSymlink()` and `Zotero.File.createSymlink()`
* Use that instead of `/bin/ln`, which doesn't exist on NixOS
* Replace `/bin/ln` with `Zotero.File.createSymlink()` in symlinked-database test

---------

Co-authored-by: Dan Stillman <dstillman@zotero.org>

(cherry picked from commit d153397151)
2026-08-27 10:53:42 -04:00
Dan Stillman
a5bff10865 Don't use FSEvents when storage isn't on a local volume
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FSEvents is backed by a per-volume journal that only local volumes
have. On a network mount the stream is created and started
successfully but never delivers events, so the watcher would report
that nothing had changed for as long as it was used. Check the volume
with statfs() and fall back to scanning.

(cherry picked from commit 5d20c692e8)
2026-08-26 10:37:48 -04:00
Dan Stillman
1ee75da2f7 Fix locally missing attachments never being downloaded
Since f21e1b2d32, a full local file scan no longer runs periodically and
on every manual sync, so locally missed attachments stayed marked for
upload and were skipped as unavailable instead of being downloaded.
"Reset File Sync History" marked every attachment for upload, including
files that had never been downloaded, so the forced download check added
in 404fc41b88 found nothing to download.

Missing files are now marked for download when the upload queue is
filled, and in at-sync-time mode they're downloaded in the same sync.
The reset marks them for download directly, and downloads are no longer
skipped just because there were no remote storage changes.

https://forums.zotero.org/discussion/133414/
(cherry picked from commit a1ea7037c2)
2026-08-26 10:37:44 -04:00
Dan Stillman
93b9106451 Fix dragging attachments to File Explorer
Firefox 140.14 in Zotero 10.0 made the drag transferable's data
principal null for chrome-initiated drags, so the file-promise stream
that File Explorer used couldn't be created and the drop failed with
"Unspecified error". On Windows the promise was just a file:// URL for
the attachment itself, so hand over the file directly instead, and
force a copy so that File Explorer doesn't move it out of storage.

https://forums.zotero.org/discussion/133399/
https://bugzilla.mozilla.org/show_bug.cgi?id=2054665

(cherry picked from commit 56eb77b704)
2026-08-25 15:26:32 -04:00
Dan Stillman
36749bd0bd Update locales from Transifex
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2026-08-24 11:14:30 -04:00
Dan Stillman
26ac397352 Fix stuck "Loading items" at startup
The collections tree selects a row as soon as it's initialized, which
raced with the items tree's initialization. If the collections tree won,
onCollectionSelected() threw on the missing items view and no items were
ever loaded.

https://forums.zotero.org/discussion/133379/
https://forums.zotero.org/discussion/133380/
2026-08-24 10:39:10 -04:00
Dan Stillman
50976f4bbd Retry note saves that time out waiting for the database
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Any error while saving a note prompted the user to restart Zotero, even
a transaction timeout caused by a long-running operation elsewhere.
Nothing has been written when the wait times out, so retry, unless newer
note content has been handed to the editor in the meantime.

https://forums.zotero.org/discussion/133298/

(cherry picked from commit f2a42bec15)
2026-08-21 16:43:29 -04:00
Dan Stillman
e192f10672 Don't hold the database to optimize the full-text index
Editing a note flagged it stale, and the background drain indexed it and
then ran an FTS5 'optimize' -- a single statement that rewrites the
content index and can hold the shared database for over a minute --
because the queue was empty again. Note saves waiting on the connection
hit the transaction timeout and told the user to restart Zotero.

Merge the index in bounded steps instead, so no statement runs long
enough to keep other queries waiting, and only after enough items have
been indexed to be worth it.

https://forums.zotero.org/discussion/133298/

(cherry picked from commit 070ae8b615)
2026-08-21 16:41:17 -04:00
Dan Stillman
6680877c88 Open the database only once when callers arrive concurrently
_getConnectionAsync() checked for an existing connection and then awaited
several filesystem operations before assigning one, so callers arriving in
that window each opened their own. Only the last was kept, and the rest
stayed open and unreachable, holding a mozStorage thread apiece until
shutdown.

(cherry picked from commit e8055dfdf2)
2026-08-21 16:38:53 -04:00
Dan Stillman
9a558f49cf Stop observing idle after the database is closed permanently
A permanently closed connection kept its idle observer, so it went on
being notified and attempting backups for the life of the process. This
affects plugin databases, which are closed permanently when the plugin
shuts down.

(cherry picked from commit 9e45191b22)
2026-08-21 16:38:39 -04:00
Dan Stillman
352562ec71 Register the DB backup idle observer only once per connection
The observer was added on every open with no matching removal, so each
reopen left behind another registration that received its own idle
notification. On macOS, where the periodic backup closes and reopens the
connection, the registrations accumulated and multiplied the work done
on each idle.

Addresses #6027

(cherry picked from commit 7243648ed7)
2026-08-21 16:29:23 -04:00
Dan Stillman
92d2a1b7ff Don't back up an unchanged database
currentDBTime and lastBackupTime became Date objects when the backup was
made asynchronous in 2014, so comparing them with == has tested object
identity and returned false ever since. The interval check that follows
measures from the backup file's mtime, which a copy inherits from the
database file, so an unchanged database was backed up on every idle.

Fixes #6027

(cherry picked from commit 85e1cbc75c)
2026-08-21 16:29:23 -04:00
Dan Stillman
95a6d8821e Fix Any Field searches at a non-item result level
Any Field expands to a generic 'field' condition, which the cross-level
code treated as matching only on top-level items. At an attachment
result level it therefore matched attachments whose parent item had the
value, instead of attachments with the value themselves. Since the
condition stands in for every field, it's now treated as matching at any
level those fields live at.

(cherry picked from commit ad98e84d24)
2026-08-21 12:56:53 -04:00
Dan Stillman
8bc2d48319 Don't prompt to save an unchanged saved search
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https://forums.zotero.org/discussion/133302/zotero-10-questions-about-search
(cherry picked from commit 0ee3e4052e)
2026-08-20 15:40:08 -04:00
Dan Stillman
ecf033eae1 Show in-window message in style preview instead of progress popup
Since 30b5bf4bb9, the popup opens as a dependent window of the main
window, so it appeared behind the Style Preview window and, on Windows,
brought the main window to the front.

https://forums.zotero.org/discussion/133296/
(cherry picked from commit e1759daa00)
2026-08-19 10:56:06 -04:00
Dan Stillman
145c78d587 Use offline database backups on network filesystems on Linux
The online backup API writes the backup file through SQLite's default
VFS, whose locking can hang on network filesystems -- its lock upgrades
conflict with the SMB byte-range lock mapping on CIFS mounts and retry
forever -- so fall back to an offline backup, which copies the file
with the connection closed. Extends getFileSystemInfo() to Linux using
statfs f_type magic numbers.

(cherry picked from commit ad1bec62f2)
2026-08-19 09:41:57 -04:00
Martynas Bagdonas
e01e6ef9f5 Fix annotations not appearing when imported while reader is opening
Fixes https://forums.zotero.org/discussion/133270/bug-embedded-pdf-annotations-and-highlights-fail-to-render-in-zotero-reader

(cherry picked from commit db1216d3e2)
2026-08-19 09:20:53 -04:00
Dan Stillman
2913397bf2 Fix doubled Index Statistics numbers after searching in preferences
The preferences search feature moves label value attributes into text
content for highlighting, so stats refreshes that set the value
attribute rendered the new number in front of the stale text.

https://forums.zotero.org/discussion/comment/516909/#Comment_516909
(cherry picked from commit b6837a3a57)
2026-08-18 17:43:01 -04:00
Dan Stillman
59a3568213 Fix database access on network filesystems on macOS and Linux
On macOS, SQLite chooses locking methods based on the filesystem
containing the database, and network filesystems (e.g., SMB, NFS),
read-only volumes, and filesystems without byte-range locking get
methods without shared-memory support, which WAL requires. Opening a
database with an adjacent WAL file on those crashes -- Mozilla's VFS
wrapper hides the missing shared-memory methods from SQLite's WAL
support check -- so the first Zotero 10 run converted the database to
WAL and every launch after that segfaulted during connection
initialization.

On macOS, mirror SQLite's method selection and use a rollback journal
when shared memory isn't available, converting an existing WAL database
before opening it: an empty WAL by reverting the header format versions
in place, and a non-empty WAL by replaying it into a temporary copy on
local disk that replaces the database file only after passing an
integrity check. A WAL file next to an already-converted database
(e.g., from an interrupted conversion) goes through the same
conversion. Also use openNotExclusive during integrity checks and
corruption recovery, which otherwise fail on SMB shares with an I/O
error from the exclusive open lock.

This corrects 22055d92b7, which passed openNotExclusive on all
platforms for an open failure described as affecting macOS and Linux,
and expected locking_mode=EXCLUSIVE to keep the WAL index in heap
memory with no -shm file. Neither claim held up: mozStorage opens the
WAL while initializing the connection, before any pragma can run, so
the index uses shared memory unless the exclusive VFS is in use, and
the exclusive open works on Linux CIFS mounts -- where non-exclusive
access instead made SQLite's lock-upgrade sequence trip over the SMB
byte-range lock mapping, leaving startup hung and the database never
created. So pass openNotExclusive only on macOS. On Linux this restores
unix-excl, which performs all locking under a single held lock and
keeps the WAL index in heap memory; Windows has no distinct exclusive
VFS and is unaffected.

https://forums.zotero.org/discussion/133258/

(cherry picked from commit bba85a3939)
2026-08-18 17:24:44 -04:00
Dan Stillman
667d0e3804 Update locales from Transifex 2026-08-17 09:43:25 -04:00
Maximilian Schmidt
a1be174c28 Fix zero local data object versions (#6016)
(cherry picked from commit b8fdee865a)
2026-08-13 11:23:49 -04:00
Dan Stillman
1e77a4bd7e Update locales from Transifex 2026-08-13 10:16:25 -04:00
Abe Jellinek
744aba091a Reader: Add support code for popup position persistence
(cherry picked from commit ad7159834c)
2026-08-11 17:03:43 -04:00
Dan Stillman
443a5825ba Fix leading space in creator autocomplete values
the all-creators mode (fieldmode 2) concatenated
firstname || ' ' || lastname, so a two-field creator without a first
name produced ' last', which advanced search fields inserted with the
space.

(cherry picked from commit c87328ada9)
2026-08-07 11:04:50 -04:00
Dan Stillman
14fd49985e Update English strings for Transifex
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2026-08-06 19:22:06 -04:00
Dan Stillman
0337dda217 Update locales from Transifex 2026-08-06 19:21:23 -04:00
Dan Stillman
2b7057a12e Skip startup full-text index purge and optimize when unnecessary
purgeOrphanedContent() ran on every startup, unlike the other
data-object purges, which are gated on the purge.* prefs.
startQueueDrain() also ran an FTS5 'optimize' even when the queues were
empty.

Gate the former on purge.items and the latter on having indexed
something.

(cherry picked from commit 8f6dc583b8)
2026-08-06 15:07:44 -04:00
Dan Stillman
06329d3379 Name annotation types by type alone in the Advanced Search
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The menu labeled Annotation Type listed "Highlight annotation" and "Image
Annotation", from the strings the reader announces annotations with. Use
the short names, which existed for two of the six.

(cherry picked from commit 3af8cea1af)
2026-08-05 15:15:03 -04:00
Dan Stillman
ec5419f80e Search: Allow binding a group whose conditions match at any level
Binding is meaningful for a condition that matches at every level -- a
tag bound to an attachment means the tag is on the attachment -- but a
group carrying one lost the binding as soon as the search was
serialized, so "items with an attachment tagged foo" couldn't be built.

(cherry picked from commit 9da57a9fe3)
2026-08-05 15:15:03 -04:00
Dan Stillman
49055c7c63 Include numeric cell values in row accessibility labels
The row label builder skipped values that weren't strings, so a numeric
cell -- a note count, or a pre-1000 year (which is parsed with
parseInt()) -- announced only its column
name.

Also switch to formatColumnName() while we're here, so row labels
resolve the column name the same way the header does.

(cherry picked from commit b83342d8e0)
2026-08-05 15:15:03 -04:00
Dan Stillman
b613875117 Fix clearing the previous sort column's persisted direction
The guard tested the newly clicked column's settings entry while the
delete targeted the previously sorted column's, so the old direction
survived when the new column had no entry, and clicking threw when the
old column had none.

(cherry picked from commit 2f90893e59)
2026-08-05 15:15:03 -04:00
Dan Stillman
89a064f607 Fix system-handler detection for PDFs/EPUBs on Windows 11
Windows 11 now stores default-app choices for protected file types
(e.g., .pdf) in a new UserChoiceLatest registry key [1], so the manual
registry lookup returned a stale value -- typically Edge -- instead of
the user's actual choice. Resolve the handler via nsIMIMEService, which
queries the effective association from the OS shell, and return false
for Microsoft Store apps, which have no launchable executable, so that
the file is opened via ShellExecute (albeit without a page number).

https://forums.zotero.org/discussion/133026/default-pdf-reader-stuck-on-edge

[1] https://kolbi.cz/blog/2025/04/20/userchoicelatest-microsofts-new-protection-for-file-type-associations/

(cherry picked from commit 8052b8f9e2)
2026-08-05 11:58:13 -04:00
Dan Stillman
fdd3434349 Update English strings for Transifex 2026-08-03 11:12:15 -04:00
Dan Stillman
c9d5aa3c8e Use general strings for file renaming prompt buttons
The invalid-template prompt had its own strings for "Go Back" and
"Reset to Default".
2026-08-03 11:08:55 -04:00
Adomas Venčkauskas
9c03a93e00
Fix tree multi-selection collapse/expand behaviour (#5983)
Closes #5974.

Additional fixes for broken item tree behaviour when multiple items are
selected, and changing focus with ctrl/cmd-arrow keys.

Aligned Collection Tree/Virtualized Tree collapse/expand behaviour when
multiple containers are selected, one of them is focused, and arrow key
left-right is pressed, to the behaviour in Item Tree - now all of them
are collapsed/expanded.

---------

Co-authored-by: Dan Stillman <dstillman@zotero.org>
2026-07-31 13:25:01 -04:00
Martynas Bagdonas
a7cae87be8
Improve undo/redo in the note editor (#3398)
- Fix "redo" command not enabled in the note editor
- Centralize note editor undo and redo commands
- Update note editor submodule

Co-authored-by: Tom Najdek <tom@doppnet.com>
2026-07-31 14:22:53 +02:00
Dan Stillman
4ec5ba9c27 Don't fail translation on open-access lookup error 2026-07-30 20:59:07 -04:00
Dan Stillman
7abcf23ef7 Move PMC lookup after open-access lookup
The PMC lookup in #5906 was added before the OA lookup, but the OA
lookup often returns a PMC URL of its own (including, at least now, for
the DOI given in the PR), with a direct file URL rather than a page to
scrape, so try it first and fall back to the PMCID-derived URL only when
it turns up nothing.
2026-07-30 20:56:28 -04:00
Dan Stillman
8bebaf0ead Fix open-access lookup for PMCID items during in-app translation
Since #5906, the 'oa' resolver list can start with a plain URL object
for items with a PMCID, but _getOpenAccessPDFURLs() and
saveOpenAccessAttachment() called resolvers[0](), which threw for those
items -- skipping the lookup silently in the first case and failing the
save in the second.
2026-07-30 20:55:16 -04:00
Dan Stillman
80658e928e Handle download challenge on PubMed Central
PMC now returns a proof-of-work challenge page in place of the PDF.
2026-07-30 16:49:59 -04:00
Dan Stillman
4388f6da20 Drop redundant charset extraction in blobToText()
readAsText() already reads the charset from the blob's type when no
encoding is passed, so pulling it out first had no effect. The regex
was also missing a quantifier and captured a single character, which
readAsText() discarded as an unrecognized label.
2026-07-30 15:49:43 -04:00
Dan Stillman
9ed00c843d Don't update read status when using Show File
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Show File triggered a file 'open' notification, so revealing a file
moved its item to the top of Recently Read. Use a separate 'reveal'
event, which file syncing still observes to queue a modification check.

https://forums.zotero.org/discussion/133006/
2026-07-30 13:43:41 -04:00
Dan Stillman
08880f7a0e Update citeproc.js to include Juris-M/citeproc-js#286
Ignore unknown style-level attributes instead of failing to load the
style, so that additive style-level attributes can be adopted in future
CSL versions without breaking deployed processors [1].

[1] https://discourse.citationstyles.org/t/faster-csl-specification-updates/2050
2026-07-30 09:43:01 -04:00
Tom Najdek
c39f16891f Extend the template engine and add template validation (#5989)
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- Fix multiple potential scenarios causing a template engine crash
 - Add support for specifying string literals in the template engine
 - Validate `if/else/elseif` order and matching clause closures
 - Validate to ensure every `{{` is properly closed with a matching `}}`
 - When a template is invalid, display a warning, do not offer batch-renaming tools, do not update synced setting
 - When a template is invalid, prompt the user to fix or reset the template when

Closes #5965
2026-07-29 13:30:12 -04:00
Tom Najdek
efcfaec5d4 Move templating engine to a standalone, lazy-loaded module (#5989) 2026-07-29 13:30:03 -04:00
Dan Stillman
dc6d55a137 Remove collectionTreeRow from the plugin menu context
Menu plugins reading it acted on one arbitrary row of the selection.
Reading it now throws and names collectionTreeRows, which the context
has already provided since multi-collection selection landed.

The context now copies property descriptors rather than values, since
copying values would evaluate the throwing collectionTreeRow getter for
every menu.
2026-07-29 13:22:58 -04:00
Dan Stillman
783da0e66e Don't offer Remove from Collection if saved search is selected
Collections and saved searches can be selected together, and the
search's items don't need to be in any of the collections, which would
result in search-only items being moved to the trash.
2026-07-29 13:12:47 -04:00
Dan Stillman
1d97f6448e Replace ItemTree#collectionTreeRow with a validated view mode
The view-wide branches (trash, duplicates, feeds, Recently Read) read
the first selected row, which multi-collection selection preserved with
a getter rather than updating. setCollectionTreeRows() now derives the
kind of view the selection adds up to, throwing if the rows disagree,
and those branches test it.
2026-07-29 13:12:47 -04:00