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1761 commits

Author SHA1 Message Date
Gergő Magyar
609c28859b
Merge branch 'main' into fix/skill-evolution-gate 2026-08-02 16:38:34 +01:00
Gergo Magyar
a522a4fbc2 fix(eval): stop failing the benchmark when main's version bumps
PINNED_GITNEXUS_VERSION did not select a runtime — the sandbox already
mounts gitnexus/dist built from the checkout by the workflow's own
`npm run build`, so the benchmark has always run main, not a release. The
constant only asserted that the checkout's package.json said "1.6.9" and
raised SandboxError otherwise.

That makes it a tripwire aimed at the wrong thing. main is 1.6.9 today,
so it passes; the next release bumps it and every skill-evolution run
hard-fails until someone edits this line — discovered on a Saturday, on a
lane that runs unattended once a week, after the box has already been
started and the proposer session paid for.

What the constant was guarding is still guarded, and better: the sandbox
canary now checks the version reported from inside the sandbox against
the checkout's own package.json, so it still proves the mounted runtime
is the one this checkout built, without a literal that has to be
maintained in lockstep with releases. The digest bindings in
promotion.json (sandbox_dependency_content_digest, graph and oracle
digests) remain what actually pins the substrate a candidate was measured
against.

The remaining check keeps package.json readable and versioned, so a
malformed runtime still fails closed.
2026-08-02 15:37:30 +00:00
Gergő Magyar
010a7d806a
fix(schema): declare the full scope-resolution relation cross product (#2792) (#2793)
* fix(schema): declare the full scope-resolution relation cross product (#2792)

`RELATION_SCHEMA` was hand-listed, and every prior fix added only the
FROM/TO pair named in a crash report — `Const→Method` in #2769, the
Swift/Rust member pairs before it. So `analyze` kept aborting at
`assertDeclaredPair` on the next codebase whose edges happened to land on
a different pair; #2792 reports `Class→Variable` on Java.

Audit the surface instead of the symptom. `buildGraphNodeLookup` skips
any node whose label is not in `isLinkableLabel`, so the lookup holds
only linkable-labelled nodes — and both endpoints of every graph-bridge
edge resolve through that lookup. The emittable surface is therefore
exactly:

  FROM  LINKABLE_LABELS + File   (the module-level caller fallback)
  TO    LINKABLE_LABELS + CALL_TARGET_TYPES

`isCallerAnchorLabel` is a strict subset of linkable and contributes
nothing on top. `CALL_TARGET_TYPES` contributes `Delegate`, which
`tryEmitEdgeWithExplicitTargetId` can emit without going through the
lookup at all.

Generate that 14x14 block into the DDL rather than listing it: 223 -> 322
declared pairs, and no future pair from these sets can be missing by
construction. The containment/inheritance/DI/route/cluster/PDG pairs stay
hand-declared — no single predicate describes them.

Both label sets live in the ingestion layer, which `core/lbug` must not
import, so schema.ts carries twin lists. test/unit/schema-pair-coverage.ts
derives the requirement from the originals and fails CI when either set
grows without the pairs landing here — the piecemeal loop this fix ends.

Measured before widening: at 322 pairs the cost is inside noise
(1.09s vs 1.12s per 300 anchored queries on a 32-table DB), but the full
32x32 cross product is ~1.8x on untyped-endpoint anchored queries. The
audited subset is the right scope, not "declare everything".

INCREMENTAL_SCHEMA_VERSION 34 -> 35: LadybugDB fixes endpoint pairs when
the rel table is created, so a pre-v35 database physically cannot store
these edges.

Closes #2792

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* fix(schema): declare the non-bridge structural pairs COBOL and Vue emit

The generated scope-resolution block closed the half of RELATION_SCHEMA a
label predicate can describe. The hand-declared half was still stale: with
#2791's Function->Variable fix applied, `analyze` continued to abort on this
repo's own test/fixtures/lang-resolution with

  Relationship label pair Module→Property is not declared

A full sweep (assertDeclaredPair patched to log-and-skip, run over the whole
fixture corpus) found 13 undeclared pairs over 106 edges. This branch already
covered 3 of them via the cross product; the remaining 10 come from emitters
outside the graph bridge:

  - cobol-processor.ts mints Module / Namespace / Record / Property /
    CodeElement and wires them with CONTAINS, CALLS and ACCESSES (9 pairs)
  - vue-sfc-extractor.ts emits BINDS_EVENT_HANDLER from a handler Function to
    the child component's File, the only edge whose target is a File (1 pair)

CodeElement, Namespace, Record and File are in neither scope-bridge label set,
so neither the generated block nor schema-pair-coverage.test.ts can reach them.

Adds test/integration/structural-pair-coverage.test.ts, which derives the
requirement from a corpus instead of a predicate: it runs the real pipeline
over the non-bridge fixtures and requires every FROM/TO pair they produce to
be declared. Mutation-checked — dropping `FROM Function TO File` fails it with
exactly Function|File.

Verified: cobol-app, vue-basic and php-transitive-traits now index instead of
aborting; the full lang-resolution corpus completes at 10,876 nodes / 18,517
edges; scrypster/muninndb at 0b7a4272 (the #2789 repro) completes at 20,069
nodes / 71,580 edges, matching #2791 exactly, so this supersedes that PR.

* refactor(test): simplify the structural pair coverage guard

Cleanup pass over the previous commit. No behaviour change to the schema.

- reuse `FIXTURES` and `runPipelineFromRepo` from resolvers/helpers.ts instead
  of re-deriving the fixture root and importing pipeline.js directly
- gate on `distWorkerExists()` like every other integration test that passes
  `workerUrlForTest`, so a missing dist skips rather than fails
- run the three fixtures with `it.concurrent.each`; they share nothing and the
  cost is almost all worker spawn plus grammar load, which overlaps well
  (tests phase 21-24s -> 5.6s measured)
- replace the sentinel-in-a-Set filter with a plain `.filter()` chain, matching
  the sibling unit test, and move the declared/table lookups off the per-edge
  path onto the deduped set
- move the pure string pin out of the integration tier into
  schema-pair-coverage.test.ts, where the identical construct already lives, so
  it needs no build and survives fixture deletion
- trim the schema and test prose that restated the code, and correct the
  BINDS_EVENT_HANDLER attribution: it is emitted by
  languages/vue/scope-resolver.ts, not vue-sfc-extractor.ts
- amend the v35 comment to mention the 10 structural pairs it now also stamps

Still mutation-checked: dropping `FROM Function TO File` now fails both the
integration sweep and the unit pin with exactly Function|File. 89 tests green.

* fix(schema): generate the attachment pair surface and close four analyze aborts

Review of the generated scope-bridge cross product found four `analyze`
hard-aborts still live at head, each reproduced end-to-end on the default
user path (`analyze --index-only --skip-git`):

  Method→Annotation   Spring `@Bean` + `@ConditionalOnMissingBean` (Java + Kotlin)
  Method→File         Vue Options-API `methods:` handler bound to a child event
  Namespace→Record    COBOL `DECLARATIVES` / `USE AFTER STANDARD ERROR ON <file>`
  Class→Tool          `@mcp.tool()` applied to a class

All four are pre-existing on main, and both existing guards were structurally
blind to them: the unit guard derives from LINKABLE_LABELS ∪ CALL_TARGET_TYPES
(none of Annotation/Tool/Record/File-as-target is a member) and the corpus
guard ran three fixtures that exercise none of these emitters. All 16 tests
passed while all four crashes were live.

The PR's model — "bridge endpoint × structural endpoint" — does not fit:
Namespace→Record is structural on both sides. The property that does hold is
that the ANCHOR is a lookup result, not a literal at the emit site, so the
emitter cannot constrain its label. That gives a second closed-form rule:

  DEFINITION_ANCHOR_LABELS × ATTACHMENT_TARGET_LABELS

DEFINITION_ANCHOR_LABELS is derived from NODE_TABLES by subtraction, so a new
node table joins automatically. 332 → 450 declared pairs.

Sized against a committed harness (gitnexus/bench/schema-pairs), real
@ladybugdb/core, identical data: 450 costs 0.93–1.05× of 332 on untyped-endpoint
anchored queries — inside noise — versus 1.22–1.43× at 641 and 2.03–2.34× at
1024. The harness reproduces the known #2792 cliff, which is what makes the 450
figure trustworthy.

Also in this change:

- Delete the 161 hand-declared pairs the rules already generate (233 → 72).
  The declared set is byte-identical at 450; those lines were load-bearing
  shadow, because the generator suppresses anything already declared
  structurally, so narrowing a rule later would silently keep pairs alive.
  A new guard fails CI if a hand-declared pair is ever re-added inside a rule.
- Import LINKABLE_LABELS / CALL_TARGET_TYPES instead of hand-copying them.
  The twins' stated justification ("the ingestion layer must not be imported
  here") is false: csv-generator.ts and lbug-adapter.ts, siblings in the same
  directory, already do, and no rule in AGENTS.md / ARCHITECTURE.md /
  CONTRIBUTING.md / GUARDRAILS.md states otherwise.
- Resolve `resolveStreamGraphEmit` after the guards that rebind `options.force`,
  not at function entry. It gates on `force`, and every freshness guard runs
  ~360 lines later, so the v34→v35 bump would have pushed every existing index
  down the non-streamed emit path — losing the #2680 memory streaming added for
  the #2649 kernel-scale OOM, for exactly the population most likely to be
  memory-constrained.
- `UndeclaredRelationPairError` now carries the relationship type, both node ids
  and the source file, with a matching CLI branch. The old message named only
  the abstract label pair, which a user could not act on. Found through the
  cause chain, since pipeline-phases/runner.ts rewraps every phase failure.
- Share one classifier (`relPairKeyFor`) across the router, both emit sinks and
  the corpus guard, which previously hand-mirrored the router's skip rule; one
  cause-chain walker in lib/utils.ts; one exported pair-matching regex.
- Corpus guard: four new fixtures reproducing the aborts, per-fixture sentinel
  pairs so a fixture that stops emitting fails loudly instead of passing
  vacuously on an empty graph.

The per-edge path stays allocation-free: the failure context is passed
positionally and the message is built only inside the throw.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_0182jkjQqzACkJKYw4MLDnhX

* test(bench): re-baseline the COBOL capture fingerprint for the new fixture

`bench/scope-capture` globs `lang-resolution/cobol-*`, so the
`cobol-declaratives` fixture added in 81daf370e (to reproduce the
`Namespace→Record` analyze abort) joined that corpus and shifted the
fingerprint — 14 → 15 files.

Verified corpus-only, not a capture change: with that one fixture moved
aside the fingerprint is byte-identical to the prior baseline
(d45bb091…), and 81daf370e touches no COBOL capture code. The new value
reproduces CI's reported hash exactly. Scaling 0.677 < 1.5 budget.

`bench/scope-capture/measure.mjs --check` → PASS (15 languages).

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_0182jkjQqzACkJKYw4MLDnhX

---------

Co-authored-by: Gergo Magyar <gergomagyar0@gmail.com>
Co-authored-by: Claude Opus 5 (1M context) <noreply@anthropic.com>
2026-08-02 16:26:25 +01:00
Gergő Magyar
74409a37f6
perf(cpp): index qualified namespace members once per pipeline run (#2788) (#2794)
* perf(cpp): index qualified namespace members once per pipeline run (#2788)

`resolveCppQualifiedNamespaceMember` walked every parsed file — rebuilding a
per-file `scopesById` map each time — once per qualified `ns::member()` call
site, so the scope-resolution emit phase cost O(callsites x scopes). On a
1,473-file C++ repo that was 25.3 min of a 33-min analyze, with 75% of total
self-time in this one function. Its inner `findMemberInNamespaceTransitive`
compounded it: each recursion step filtered `scopesById.values()` by parent,
O(scopes^2) per file on its own.

This is the same bug #1990 fixed in the sibling ADL path (`pickCppAdlCandidates`
-> `AdlCandidateIndex`), so it gets the same fix: a `QualifiedNsMemberIndex`
(receiver simple name -> member simple name -> callable defs) built lazily once
per `parsedFiles` identity and reset by `clearCppInlineNamespaces`, which runs
from `cppScopeResolver.loadResolutionConfig` at the start of every pass. Per
call site the work drops to two Map lookups.

Ordering is preserved exactly — file-major, `parsed.scopes` declaration order,
a namespace's own `ownedDefs` before its inline-namespace children, depth-first
— because the caller takes `allHits[0]` for the single-hit case and
`narrowOverloadCandidates` is first-wins. Non-inline nested namespaces are
still not descended into, and same-name hits across inline children still
report `'ambiguous'` (#1564).

Measured with `PROF_SCOPE_RESOLUTION=1 analyze --force --index-only` on a
synthetic corpus (`namespace ns_i { inline namespace v1 { ... } }` plus 20
`ns_j::fn()` call sites per file):

| files | emit before | emit after |
|-------|-------------|------------|
| 100   | 153ms       | 16ms       |
| 200   | 704ms       | 24ms       |
| 400   | 3,293ms     | 42ms       |
| 800   | 16,898ms    | 78ms       |

Before, doubling the file count quadrupled emit; now it doubles. At 800 files
total scope resolution goes 17.2s -> 394ms.

Output is unchanged, verified rather than assumed: a full graph dump (sorted
nodes + relationships) from a baseline build at the parent commit and from this
one are byte-identical on all 134 `cpp-*` fixtures merged into a single repo
(1573 nodes / 1997 relationships) and on the 400-file synthetic corpus.
`test/integration/resolvers/cpp.test.ts` passes 334/334.

#1990 shipped its ADL fix without a scaling gate, which is how the bug class
came straight back here, so this adds one: `bench/cpp-qualified-ns` measures
`(t_large/t_small)/(1600/400)` — 0.93-1.21 indexed versus 3.45 for the old
per-call-site scan — alongside a fingerprint over every
`receiver::member -> outcome` the corpus resolves, and CI runs it with
`--check`. `test/unit/cpp-qualified-ns-index.test.ts` covers the cache
invalidation the index introduces.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* fix(cpp): address tri-review findings on the qualified-namespace index (#2788)

Multi-engine review of this PR (Claude swarm + ce-code-review, Codex
gpt-5.6-sol swarm + ce + adversarial) returned two P1s and five smaller
findings. All are fixed here.

P1 — the index defeated the pipeline's post-language memory release.
`scope-resolution/pipeline/phase.ts` evicts each language's files and then
calls `forceGc()`, on a stated premise that "This language's ParsedFiles are
now unreachable", sizing C/C++ at ~17-20GB on the Linux kernel. The
module-level `let qualifiedNsIndexSource` falsified that: it pinned the whole
`parsedFiles` array, and the index held defs reaching into those files'
scopes, until the *next* C++ pass cleared it — which in a single analyze never
comes. C++ is 7th of 16 in SCOPE_RESOLVERS, so the set survived nine later
language passes plus emit. Replaced with a
`WeakMap<readonly ParsedFile[], QualifiedNsMemberIndex>`, the pattern already
used by `moduleScopeIndexByPass` in `cpp/file-local-linkage.ts`.
`clearCppInlineNamespaces` still swaps in a fresh WeakMap, because the index
has a second input (`inlineNamespaceScopeIds`) the key cannot observe.
Measured with `--expose-gc`: 61.2MB retained after the caller drops the array
before, 0.1MB after.

The ADL twin (`adl.ts`) has the same pattern, so the hazard predates this PR —
but `pickCppAdlCandidates` returns early before `ensureAdlIndex` on
`noAdlSites`/empty `argInfoBySite`, so it rarely arms, whereas a qualified
`ns::member()` index arms on almost every C++ workspace. Moving the ADL twin
to a WeakMap is left as a follow-up.

P1 — the new bench could not see the regression class it exists to gate.
`callSites()` drew every receiver from `ns_${...}`, so the receiver lookup
never missed; production is the opposite, since Case 1.5 in
`receiver-bound-calls.ts` is reached by every plain-identifier receiver call
and misses on most. A rescan reintroduced only on the receiver-bucket-absent
path scored 1.279 and PASSED the old bench. The corpus now mirrors production
(~1 in 5 receivers name a declared namespace) and adds a namespace reopened
across files, a same-name inline nest, a member declared at both namespace and
inline-child level, and call sites carrying a real `Callsite` so
`narrowOverloadCandidates`/`cppConversionRank`/
`isOverloadAmbiguousAfterNormalization` are inside the fingerprinted surface at
all. That same rescan now measures 4.538 and FAILS; defeating the dedup now
fails the fingerprint arm where it previously passed byte-identical. The
fingerprint moved once, deliberately, for the corpus expansion — recorded in
`_rebaseline_2788_review`, explicitly not precedent.

Also fixed:

- Unbounded recursion aborted analyze. `collectNamespaceMembers` recursed per
  inline child with no bound and threw an uncontained `RangeError` at inline
  depth 8000 (`phase.ts`'s try has a `finally`, no `catch`), and a receiver
  *miss* paid full recursion where the deleted walker skipped on a name
  mismatch. An explicit work-stack alone would only have converted that into
  an OOM at depth 6000, because the eager table was quadratic in memory too:
  for a depth-D chain it legitimately holds D(D+1)/2 entries, since `v2::foo()`
  is a valid receiver at every level. Replaced with a lazily-queried node graph
  (per-scope own-member buckets plus direct child links, resolved on demand and
  memoized per receiver+member). Build is now linear; depth 100000 costs 133ms
  where 8000 previously threw.
- "#1990 shipped without a scaling gate" was false. #1990 did ship
  `test/integration/cpp-adl-benchmark.test.ts` (f1b843838). Corrected in the
  bench header and the CI step comment. The accurate point is narrower and
  stronger: that bench asserts `callsResolved === 0`, so it never drives the
  qualified-receiver path, and it is `skipIf(!GITNEXUS_BENCH)` while the only
  step setting that variable lists neither C++ bench — so it has never run in
  CI. Wiring it in is a follow-up.
- "Ordering is load-bearing" was not a live property: `allHits[0]` is only
  reached at length 1, and both tail branches return `'ambiguous'`. Order is
  still preserved for byte-identity with the pre-#2788 walker; the comment now
  says that instead, and the test named for ordering is renamed to the
  parent/inline-child visibility it actually asserts.
- "Same contract as `ensureAdlIndex`" overstated parity — the sibling ships a
  `validateAdlSeqCoverage` guard because it reads
  `seqByNodeId.get(...) ?? 0`, which can silently collapse candidates. This
  index has no analogous defaulting read, so no guard is added; the comment now
  says why.
- Two coverage gaps closed, both mutation-verified: cross-file merge of one
  namespace reopened in two files (no existing test covered it — confirmed by
  making each file clobber the previous and watching only the new test fail),
  and the same-name inline nest whose dedup, when defeated, flips a resolved
  def to `'ambiguous'`.
- `resolveCppQualifiedNamespaceMember`'s JSDoc now names both production call
  sites, including the callsite-less `resolveAdlCandidates` path.
- Memoized candidate buckets are frozen, so a future in-place sort in
  `overload-narrowing.ts` throws instead of silently corrupting later
  resolutions now that the array is shared across call sites.
- `_scaling_note`'s "measured 0.93-1.21" band did not reproduce; it is now the
  honestly observed 1.28-1.45, with the small arm widened to ~14ms (halves the
  spread) and a triage line saying a scaling failure is a timing signal to
  re-run, unlike the deterministic fingerprint arm.

Verification: 840,000 differential probes against the pre-#2788 walker
extracted from base, 0 mismatches, plus 48,000 candidate-order comparisons,
0 mismatches. cpp resolver integration suite 334/334. Unit suite 10/10.
tsc, eslint, prettier clean. Bench --check PASS.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* fix(bench): escape the NUL separator so measure.mjs stays a text file

The fingerprint key separator was written as a literal NUL byte instead of the
`\u0000` escape. Git classifies any file containing a NUL as binary, so the
whole bench showed as `Bin` with no diff on GitHub and could not be reviewed —
the same defect this branch already fixed once before the tri-review.

Escaping it is byte-for-byte equivalent at runtime (both produce U+0000), so
the committed fingerprint is unchanged and `--check` still passes.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* refactor(cpp): quality cleanups from a four-angle review of the #2788 series

Reuse, simplification, efficiency and altitude passes over the diff. No
resolution behaviour changes: the bench fingerprint is unchanged and the C++
resolver integration suite still passes in full.

Efficiency

- The `Object.freeze` added in the review-fix commit to close an aliasing
  residual costs 4.6x on the narrowing path — V8 moves frozen arrays to
  PACKED_FROZEN_ELEMENTS, off the fast path for the `.filter`/`.map`/`.some`
  runs `narrowOverloadCandidates` does at every multi-candidate call site.
  The hazard it guards is already a compile error (both the memo and the
  parameter are `readonly SymbolDefinition[]`), so it is now a dev-only
  tripwire. Gated on `isSemanticModelValidatorEnabled()` — the repo's opt-IN
  form used by `phase.ts` and `validate-bindings-immutability.ts` — not
  `adl.ts`'s opt-out `NODE_ENV !== 'production'`, which would keep paying the
  cost in CLI runs where `NODE_ENV` is unset. Large bench arm 100.3 -> 70.6ms.
- The index build scanned every scope in every file twice; pass 1 now collects
  `[scope, node]` pairs for pass 2 to iterate. 800k scopes 14.40 -> 8.21ms.
- `simpleNameOf` uses `lastIndexOf('.')` + `slice` instead of
  `split('.').pop()` (83 -> 24 ns/call), semantics verified byte-equivalent
  over 12 edge cases including `undefined`, `''`, `'a.'`, `'.b'` and `'a..b'`.
- The per-call `hookCtx` literal is hoisted to a module const.
- The bench's fingerprint pass resolved 960k call sites to produce 5,800
  distinct outcomes; it now dedups on the key it already builds. Bench wall
  time 2.4 -> 1.9s, fingerprint byte-identical.

Reuse

- `bucketOwnMembers` used an inlined `Function | Method | Constructor` compare;
  it now calls the canonical `isOverloadableCallable`. `graph-bridge/ids.ts`
  already carries a note that inlining this list recreated twin-list drift once.

Altitude

- `adl.ts` had the same retention defect this series just fixed next door: a
  module-level `let adlIndex` + `let adlIndexSource` strongly pinning the whole
  `parsedFiles` array until the next C++ pass, which in a single analyze never
  comes. Converted to the same `WeakMap` shape. Measured with `--expose-gc`:
  89.11MB retained after the caller drops the array before, 0.17MB after. Six
  file-local helpers now take the index as a parameter; no exported signature
  changed.
- The index's freshness depended on `clearCppInlineNamespaces()` being called
  from another file, guarded only by a warning paragraph. An epoch bumped in
  both `populateCppInlineNamespaceScopes` and the clear is now stored with the
  memo, so a missed clear degrades to a rebuild instead of a stale answer —
  confirmed by driving inline state mid-pass without the clear. Roughly line
  neutral, since it replaces most of the paragraph.
- `test/integration/cpp-adl-benchmark.test.ts` is wired into the
  `GITNEXUS_BENCH` step. It is `skipIf`-gated and was absent from that step's
  explicit file list, so #1990's ADL emit-scaling guard had never executed in
  CI. It passes; ~50s added to a 25-minute job. `cpp-pipeline-benchmark.test.ts`
  is deliberately NOT wired: it costs 115s for guards covering generic
  per-language pipeline scaling that nothing here touches.

Simplification

- Deleted a comment referencing a `inlineChildrenByParent` map that only ever
  existed inside this branch's own first commit, so "the legacy map" pointed a
  reader at code that never shipped.
- Dropped three unreachable `undefined` guards (`strict: false`, no
  `noUncheckedIndexedAccess`), keeping the load-bearing `visited` check.
- Compressed the `rootsByReceiver` doc from 17 lines to 7 — it was the longest
  comment in the file and guarded the least consequential property — the
  `validateAdlSeqCoverage` paragraph from 7 lines to 3, and turned three
  restatements of the uncaught-throw and dedup arguments into pointers.
- Test fixtures: dropped the dead `'Module'` union arm, added a one-line `ns()`
  builder for the nine hand-written scope literals, and moved the file to
  `test/unit/scope-resolution/cpp/` where every other C++ scope-resolution unit
  test lives. 403 -> 337 lines, same 10 tests, and the cross-file mutation check
  still fails exactly one test.

Not done, and why: merging this index into `AdlCandidateIndex` (they key on
different names with different inline-transparency depth — a refactor with
correctness risk, not a cleanup); `ScopeTree.getChildren` (trades in-memory
`parsed.scopes` for store hits on a hot path); a shared `cpp/` util for the five
pre-existing `simpleName` copies; sharing fixtures across the bench/test
boundary (no precedent in this repo); and an exact-count arm for the bench,
which is a gate redesign worth its own change.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

---------

Co-authored-by: Gergo Magyar <gergomagyar0@gmail.com>
Co-authored-by: Claude Opus 5 (1M context) <noreply@anthropic.com>
2026-08-02 15:52:33 +01:00
Gergo Magyar
f484e2cf34 fix(eval): drain with read1 so progress surfaces before the child exits
The live proof run showed the driver's own lines streaming correctly and
every one of the sweep's 24 cell lines sharing one timestamp
(12:05:29.96) four hours after the sweep began — the exact symptom
echo_stdout was added to remove, still present for the phase that
actually takes the fifteen hours.

`_drain` read with `pipe.read(8192)`. On a BufferedReader that blocks
until it has all 8192 bytes or the pipe closes; it does not return short
reads. A sweep emits a couple of short lines per ~45-minute cell and
never fills 8 KB, so everything sat in the buffer until the process
exited. The tail and the capture were unaffected — they only need the
bytes eventually — which is why nothing caught it before.

The existing echo test could not have: its child wrote one line and
exited immediately, so EOF made `read` return. The new test makes the
child refuse to exit until the echoed line has been observed, so an
implementation that only flushes at EOF deadlocks and fails on the
timeout instead of passing on a technicality. Verified it fails with
`read` and passes with `read1`.
2026-08-02 12:12:08 +00:00
Gergo Magyar
a5251d6b08 docs(ci): record why the runner box must not restart services mid-job
A run spans ~15h and apt-daily-upgrade.timer fires daily around 06:34, so
every scheduled run crosses it. On 2026-08-02 unattended-upgrades upgraded
openssl at 07:54:02 and needrestart restarted the Actions runner five
seconds later. The job went to Canceled 14s after that, and a cancelled
job skips even `if: always()` — so the evidence artifact died with it,
which is the one outcome the rest of this workflow's budget nesting exists
to prevent.

This is a plausible contributor to the unexplained mid-run failures in the
July dispatch cluster, none of which left an artifact behind either.

The box config itself is applied out-of-band like the rest of the instance
setup; the checklist now carries the requirement so a rebuilt box does not
silently reintroduce it.
2026-08-02 08:25:27 +00:00
Gergo Magyar
2fbd5ee515 fix(ci): make the task repo resolve the ref its tasks name
Every task in tasks.scenarios.yaml names `ref: main`, and resolving it is
the first thing task binding does. actions/checkout only creates a local
ref for the ref it checked out, so `main^{commit}` resolves on a main run
and dies with "unknown revision" on any other — which is what a
workflow_dispatch from a branch hits, before a single session starts.

The step that points the benchmark at the checkout now also makes that
checkout able to answer for the refs the tasks name. On a main run the
fetch is a no-op.
2026-08-02 07:07:15 +00:00
Gergo Magyar
21eee1e20e test(eval): prove one cell's timeout cannot reap a sibling's process tree
`run_managed` reaps by process group, and cells only ever ran one at a
time before `--workers`. Nothing exercised what happens when a `killpg`
fires while other owned trees are alive — a leaked or shared pgid would
take the siblings down with it, and the sweep would read that as two
more excluded runs, which is exactly what the promotion gate refuses to
decide on.

Three real cells run concurrently: one times out and is force-killed
while the other two are mid-flight with descendants of their own. The
test asserts the victim's descendant never escapes and both siblings
still finish with their output intact.

This is the part of the concurrency change reachable without a real
sandbox — bubblewrap needs unprivileged user namespaces, which the
container this was written in denies, so the bwrap canaries stay skipped
here and run in the named Ubuntu CI job.
2026-08-02 06:53:23 +00:00
Gergő Magyar
56fc7936d2
Merge branch 'main' into fix/skill-evolution-gate 2026-08-01 22:42:41 +01:00
Gergő Magyar
911151e230
fix(resolution): resolve Go pointer-receiver calls, and report the program boundary instead of hedging (#2766) (#2782)
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2026-08-01 22:42:18 +01:00
Gergo Magyar
b5bcdb6c48 fix(eval): redact the token from the one failure line that now reaches CI
`ManagedProcessError.__str__` embeds up to 1000 raw bytes of stderr_tail
(process_control.py:72-73), and run_cell printed it verbatim. That line
was inert until this branch: nothing ever printed the sweep subprocess's
stdout, on success or failure. `echo_stdout` streams it live into the job
log, so the print became a sink — and the only one of its kind here that
skipped `redact_text`, which results.jsonl and every transcript already
apply to exactly this field, for exactly this reason.

GitHub masks the registered secret, but masking only catches that literal
value; it is not the guarantee the other sinks have.

The test drives a ManagedProcessError carrying the token in stderr_tail
and asserts it never reaches stdout — verified to fail without the fix.

Also from the same pass: bind `result_indexes[0]` once in run_claude, and
give the workflow contract test a `findStep` helper instead of five
copies of the same `steps.find` predicate.
2026-08-01 20:11:00 +00:00
Karl Lehenbauer
639eb04b31
fix(swift): preprocess indented conditional directives so class bodies survive parsing (#2771)
* fix(swift): preprocess indented conditional directives so class bodies survive parsing

* fix(swift): make conditional-directive blanking comment-, string- and brace-aware (#2771)

Addresses the review findings on PR #2771. The transform fired
unconditionally, which turned valid Swift into parse errors while missing the
most common shape it was written for.

- The blank/keep decision now consults `blockCommentDepth`, so `  #endif */` —
  the result of commenting out a conditional block — keeps its comment
  terminator. Previously `hasError` went raw=false -> preprocessed=true and the
  rest of the file was swallowed.
- The decision keys on the scanner's brace depth instead of indentation. A
  column-0 `#if` inside a class body is blanked (6 of 7 body shapes previously
  still lost the enclosing declaration) and an indented file-scope directive is
  not — matching what the doc comment already claimed. Bare-CR line endings,
  NBSP/ideographic indentation and a leading BOM are recognized too.
- A group is blanked only when every branch is brace-balanced. An `#if`/`#else`
  that splits a declaration header leaves one unmatched `{` once both branches
  survive, which collapsed five top-level nodes into one and gave unrelated
  types fabricated `NetworkClient.` qualified names. Such a group now degrades
  to the pre-fix behavior.
- Multiline strings honour `\"""` escapes, and a plain `"""` closes even when a
  `#` follows it, so the scanner no longer wedges in string state and silently
  stops blanking for the rest of the file.
- The pound run is counted once per position and skipped. It was quadratic:
  10.6s for one 64k-`#` line, well inside the 512 KB walker limit.
- Extended regex literals (`#/.../#`) no longer open a phantom block comment.
- Directive-free files return early, matching `stripUeMacros`.

Worker parity: `emitSwiftScopeCaptures` and `emitCppScopeCaptures` re-apply
their provider's `preprocessSource` on the parse-cache-miss path — Dart already
did this — and the embedding parse in `ensureAndParse` applies the hook as
well. Before this the worker and the scope-capture/embedding halves analyzed
different programs, turning a consistent degradation into cold-run/warm-run
non-determinism. A new parity test pins the equivalence for every provider that
defines the hook.

SCHEMA_BUMP 37 -> 38: this changes parse semantics, the chunk key hashes raw
on-disk bytes, and `preprocessSource` runs after the key is computed — so a
same-package-version warm cache would replay pre-fix Swift results verbatim,
including across `--force`.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* refactor(ingestion): apply preprocessSource once in the scope bridge (#2771)

Follow-up cleanup on the review fixes. The previous commit re-applied each
provider's `preprocessSource` inside `emitSwiftScopeCaptures` and
`emitCppScopeCaptures`, mirroring what Dart already did — three copies of the
same rule, and a contract that asked every future emitter to remember it.

`extractParsedFile` is the single funnel every `emitScopeCaptures` caller
passes through (parse worker, scope-resolution run, Vue script extraction), and
it already receives the provider. Applying the hook there on the cache-miss
path covers all three languages and every future one, names no language in
shared code, and drops Dart's unconditional transform on the cache-hit path.
Verified the three emitters use `sourceText` for nothing but the parse, so the
substitution is output-identical — which the parity test asserts directly.

Also from the cleanup pass:

- the parity test derives its language list from the provider registry, so a
  new provider adopting the hook fails until it adds a fixture
- `ensureAndParse` resolves the provider from the language it already computed,
  instead of a second extension table (`getProviderForFile`)
- the preprocessor returns `sourceText` unchanged when no group was blanked,
  which is the common case for files whose only directives are top-level
- `split(/(\r\n|\n|\r)/)` replaces the hand-rolled line splitter, and the
  per-group brace bookkeeping is two scalars instead of an array
- the hint regex is derived from the line regex so the two cannot drift
- unit assertions compare the WHOLE preprocessed file against the expected
  blanking, replacing per-line spot checks; the pipeline tests share one
  `runFixture` helper and `getNodesForFile` in the resolver test helpers
- `LanguageProvider.preprocessSource` documents the real call sites and says
  plainly that the set is not closed — `populateRangeBindings` still hands
  language helpers raw text

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* chore(autofix): apply prettier + eslint fixes via /autofix command

---------

Co-authored-by: Gergő Magyar <gergomagyar@icloud.com>
Co-authored-by: Gergo Magyar <gergomagyar0@gmail.com>
Co-authored-by: Claude Opus 5 (1M context) <noreply@anthropic.com>
Co-authored-by: github-actions[bot] <41898282+github-actions[bot]@users.noreply.github.com>
2026-08-01 20:10:58 +00:00
Gergo Magyar
8076b98fcc refactor(ci): address the evidence path directly instead of threading it
The upload step needs a path that does not depend on the sweep step
surviving. It did not need shared state to get one: `runner.temp` is
available in a step, only not in a job-level `env:`, so each of the three
consumers can name `${RUNNER_TEMP}/wfevolve` itself. That deletes the
env var and the step that published it — the previous fix swapped one
threading channel for a sturdier one where no channel was required.

Also from the same review pass:

- `announce`/`keep` drop their default-argument capture of `task["id"]`
  and `per_arm`. Late binding only bites a closure invoked after the loop
  moves on; these are called synchronously inside `sweep_task_cells`,
  which blocks until every wave completes. The trick was guarding against
  a race that cannot happen here, while implying to the next reader that
  it can.
- `_stub_cell_dependencies` returns the list its teardown appends to
  rather than taking it as an out-parameter, dropping the boilerplate
  from every call site.
- The workflow's `WORKERS` comment points at the `--workers` help text
  instead of restating it, so the rationale has one home.
2026-08-01 19:34:57 +00:00
azizur100389
d268f351d3
fix(group): preserve manifest-only impact crossings (#2784)
* fix(group): preserve manifest-only impact crossings

Keep proven manifest cross-repo hits when the far endpoint has no concrete graph symbol, avoiding a guaranteed failed UID fan-out.

* fix(group): verify manifest-only neighbor repos

Keep manifest-only crossings from bypassing neighbor repository resolution so unavailable repos still surface as truncated fan-out.

* fix(group): distinguish boundary-only impact crossings

Keep manifest-only boundaries visible without treating unattempted fan-out as completed impact or escalating risk, and cover service scope, deduplication, and real bridge persistence.

---------

Co-authored-by: Gergő Magyar <gergomagyar@icloud.com>
2026-08-01 20:24:06 +01:00
Gergo Magyar
d18dbd4143 fix(ci): publish the evidence path from a step, not a job-level env
`${{ runner.temp }}` does not exist in a job-level `env:` block — the
runner context is only available to steps — so OUT_ROOT would have
resolved to a bare `/wfevolve` at the filesystem root. The sweep would
have failed writing there, and the upload would have pointed at nothing.
actionlint caught it; this repo lints workflows for exactly this reason.

The property that mattered is kept: the path is fixed before anything can
fail, rather than read from the sweep step's outputs — that being the
step whose death is the reason the upload matters. The first step now
publishes it to GITHUB_ENV, which every later step sees, including the
`if: always()` upload after a killed sweep.

The contract test pins the step's position and its exact line, so the
context cannot creep back into the job block.
2026-08-01 18:53:51 +00:00
Gergő Magyar
c05c56ffc9
Merge branch 'main' into fix/skill-evolution-gate 2026-08-01 19:50:33 +01:00
Gergo Magyar
edb24da1e8 feat(ci): expose benchmark cell concurrency to the evolution lane
`--workers` reaches the sweep from evolve.py and from a workflow_dispatch
input. Both default to 1, so nothing about the scheduled lane changes:
the runner is sized for one cell at a time, and a cell starved of CPU
drifts toward its session timeout, which the gate counts as an excluded
run and refuses to decide on.

generation_timeout_seconds is left alone deliberately — it is a
worst-case sum-of-every-timeout bound (843h at current settings), already
far looser than any real run, and concurrency only makes it looser.

Raising the input is gated on the runner resize; the contract test pins
the default so the lane cannot start running 3-way on a 2-vCPU box by
accident.
2026-08-01 18:48:19 +00:00
Gergo Magyar
63d29c384f feat(eval): run a task's benchmark cells in waves instead of one at a time
18 cells at ~48 min each, strictly serial, is 97.4% of a generation's
14.7h. The cells are independent — the wall clock was a scheduling
choice, not a measurement requirement.

`--workers` (default 1) runs the cells of one task concurrently; tasks
stay sequential, so the sanitized graph snapshot each task already builds
before its cells stays a single-writer affair. Threads, not processes:
cells are subprocess-bound and `run_managed` keeps every piece of
ownership state local to its own call, so nothing is shared to race on.

Waves, not one fan-out. The outage breaker counts CONSECUTIVE systemic
failures, and "consecutive" means nothing in completion order — folding
as futures landed would make the trip point flaky between identical runs.
Each wave is folded in submission order once complete, and the next wave
starts only if the breaker held, so the breaker overruns by at most
`workers - 1` cells (the ones already in flight) rather than by a whole
task.

`--workers 1` calls the cell directly rather than using a pool of one.
That is not an optimisation: an async KeyboardInterrupt is delivered only
to the main thread, so a cell on a worker thread is outside the reach of
the ownership cleanup that kills its sandboxed process tree. The default
therefore stays exactly what it is today, Ctrl-C included, and above 1
the flag's help says what is given up.

All bookkeeping stays on the main thread — the results.jsonl append, the
per-arm accumulation, the progress prints, the streak fold. No lock is
needed anywhere, the progress counter cannot race, prints do not
interleave, and results.jsonl keeps its canonical order.

Every future is read. An exception a cell did not expect stays parked
inside its Future until something asks for it; unread, a harness bug
would become a silently missing run instead of a crash.
2026-08-01 18:48:19 +00:00
Gergo Magyar
b30f530698 refactor(eval): make a benchmark cell a callable instead of loop-body scope
The sweep's innermost body — clone, sandbox, sessions, verify, oracle,
teardown — was ~260 lines of `main()`'s scope, reachable only by running
the whole sweep. Nothing tested it, and it could not run anywhere except
that loop.

`run_cell(ctx, run_idx, arm)` now owns one (run, arm) cell and returns
its row; `TaskCellContext` is a frozen dataclass holding the per-task
inputs a cell reads, so a cell depends on named fields rather than on
whatever `main()` happens to have in scope. The try/except/finally moves
verbatim, exception whitelist unchanged: a harness bug still escapes
rather than being recorded as an ordinary infra-error and averaged into
the evidence.

The task asset snapshot is now prepared once per task, next to the graph
snapshot, instead of lazily inside whichever cell reached it first.
`TaskAssetCache` is a plain dict (task_assets.py:222-226,340), so the
lazy build was a read-then-write race waiting for a caller that is not
strictly serial. One behavior delta: when that preparation fails, every
cell of the task now reports the same wrapped RuntimeError, where before
the first cell reported the original OSError/SandboxError/ValueError.

The loop keeps all the bookkeeping — progress counter, prints, the
results.jsonl append, per-arm accumulation, the outage streak. Behavior
is otherwise unchanged; this is the seam, not the concurrency.

Six new tests cover it, the first coverage this body has ever had: the
row's task/arm/run/digest bindings, each of the five expected failure
kinds still removing the clone, an unexpected KeyError escaping while
cleanup still runs, cleanup failure overriding the primary outcome, and a
failed per-task snapshot failing every cell closed.
2026-08-01 18:48:18 +00:00
dependabot[bot]
a6aae8142d
chore(deps)(deps): bump brace-expansion from 5.0.7 to 5.0.9 in /gitnexus (#2786)
Bumps [brace-expansion](https://github.com/juliangruber/brace-expansion) from 5.0.7 to 5.0.9.
- [Release notes](https://github.com/juliangruber/brace-expansion/releases)
- [Commits](https://github.com/juliangruber/brace-expansion/compare/v5.0.7...v5.0.9)

---
updated-dependencies:
- dependency-name: brace-expansion
  dependency-version: 5.0.9
  dependency-type: indirect
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2026-08-01 18:00:21 +00:00
Gergő Magyar
48a03464de
Merge branch 'main' into fix/skill-evolution-gate 2026-08-01 18:44:36 +01:00
Gergo Magyar
01be282667 fix(ci): make the evolution lane survive its own deadlines and remember prior runs
An end-to-end pass over the lane — instance start, job, artifacts,
promotion — found three ways it loses work that has already been paid for.

**Evidence died with the job.** Three budgets have to nest: EventBridge
keeps the box up 24h from ~02:45, the job timeout was also 1440min, and
the sweep had no budget of its own. A job-level timeout CANCELS the job,
so the upload step never runs; and since the box stops 24h after it
starts while a scheduled run can begin well after the cron (the
2026-08-01 run was queued 65min late), the box always won that race —
the runner would simply vanish mid-step. The job now gets 21h, the sweep
step 19h, so a wedged generation fails the step, keeps the job alive, and
still uploads. The nesting is asserted in the contract test.

**The upload could be skipped.** Its path came from an output the sweep
step wrote — the same step whose death is the reason the upload matters.
OUT_ROOT is now a job-level env constant known before anything runs, and
the upload is unconditional: results.jsonl and transcripts are appended
as the sweep goes, so a killed generation still holds the evidence that
explains why it died.

**The lane was memoryless.** `--seed-results` is how a run sees what
already lost (summarize_gate feeds the prior promotion.json to the
proposer), and with the default --generations 1 there is no earlier
generation in-process to supply it — the workflow never passed it, so
every Saturday proposed from a blank slate and could re-propose the same
rejected candidate forever. The lane now seeds from the last successful
run's artifact, best-effort: a first run, an expired artifact, a missing
gh, or a failed download proceeds without it rather than costing a
generation.

Also guards the silent-promotion path: `.claude/skills/*` is gitignored
with a hand-maintained per-skill allowlist, and `git status --porcelain`
— how the workflow detects an applied promotion — is blind to ignored
paths. A candidate skill missing from that allowlist would report "No
promotion this run" after the gate said promote. A test now asserts every
CANDIDATE_SKILLS entry is visible in all three shipped trees.
2026-08-01 17:42:48 +00:00
ivangegovdve-sudo
565287528d
fix(ci): stop CI Report dying silently when the tests job fails (#2728)
* fix(ci): stop CI Report dying silently when the tests job fails

The "Build report" step in ci-report.yml runs under
`bash --noprofile --norc -e -o pipefail`. It located its inputs with

    UNIT_SUMMARY=$(find "$DIR/test-reports" -name ... 2>/dev/null | head -1)

`coverage-merge` in ci-tests.yml is `needs: tests` with no `if: always()`,
so any failing shard skips it and the `test-reports` artifact is never
uploaded. `find` then runs against a directory that does not exist and
exits 1; `-o pipefail` carries that status through `| head -1`, the
command substitution hands it to the assignment, and `-e` kills the step.

The death is invisible: `2>/dev/null` discards find's error and the whole
report is built into `$GITHUB_OUTPUT`, so the step logs nothing and just
reports "Process completed with exit code 1". "Comment on PR" is then
skipped, so the CI Report workflow fails and posts nothing on exactly the
PRs whose tests failed — when the report is most useful. The
"Coverage data unavailable" fallback already existed for this case but
was unreachable, because the script died ~160 lines before it.

Route the four lookups through a `find_first` helper that returns empty
when the root is absent. Verified by extracting the step body and running
it against both artifact layouts: with `test-reports` present the output
is byte-identical to the previous script (1335 bytes), and with it absent
the step now exits 0 and emits the coverage-unavailable report instead of
exiting 1 with an empty $GITHUB_OUTPUT.

Observed on 32 of the last 100 failed runs; correlation with the tests
job's conclusion was 6/6 failure and 4/4 success in the sampled runs.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* fix(ci): let the prebuild assertion report a missing .node

`Build prebuild` deletes `$pkgdir/prebuilds` before running prebuildify,
so a run that emits nothing without failing leaves `find` searching a path
that no longer exists.  Under the step's `shell: bash` (`-e -o pipefail`)
that `find` exits 1 and kills the step before the `test -n "$out"` guard
below it — the guard written to explain exactly this case never runs, and
the job dies with a bare "Process completed with exit code 1".

Same shape as the `ci-report.yml` fix in this PR: a lookup that exits
non-zero on an absent root pre-empts the fallback beneath it.  `|| true`
hands the empty result to the guard, which still fails the build, now with
`::error::prebuildify produced no .node`.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 5 (1M context) <noreply@anthropic.com>
Co-authored-by: Gergő Magyar <gergomagyar@icloud.com>
Co-authored-by: Gergo Magyar <gergomagyar0@gmail.com>
2026-08-01 18:31:49 +01:00
Gergo Magyar
5f51c9ed80 refactor(eval): fold the review cleanups into the evolution fixes
- `_na` moves next to `measured_cost` in runner_sessions, the function
  whose None it renders, so the proposer-progress line stops
  reimplementing it inline.
- `evaluate_candidate` derives `ungated_tasks` from the `gated` flag
  already on each row instead of accumulating a parallel list, and
  reports the carve-out as one aggregate line rather than one per task:
  `reasons` is truncated to three entries when it is fed back to the
  proposer (summarize_gate), and a growing set of unsolvable tasks must
  not crowd out why the candidate actually won or lost.
- run_claude cuts the event window at the result event, so "nothing after
  the result is evidence" is a property of what the readers below can see
  rather than an assumption that a `system` event never carries a
  tool_use block.
- The teardown test builds its stream with the existing `event_stream`
  fixture instead of re-joining the prefix by hand.
2026-08-01 17:18:43 +00:00
Gergo Magyar
2c399a0039 fix(eval): stop letting a task neither arm can solve veto every promotion
The gate demanded that the candidate resolve every valid run of every
selected task, regardless of how the incumbent scored. inv-feature-list-
repos-filter fails its hidden oracle on 100% of runs in both arms, so the
quality floor could never be met while it stayed in the set — and its
cost comparison (which ranks who spent more while failing the same
oracle) also fed the per-task regression cap and the median. One task
outside both arms' capability was silently vetoing every future
promotion.

A task both arms measured cleanly — at least min_runs valid runs, zero
exclusions — and that neither ever resolved carries no signal about the
candidate. It is now reported in the decision (`gated: false`, plus an
`ungated_tasks` list and a named reason) and left out of the floor, the
regression cap, and the median. It still runs, and its failures still
feed the proposer as evidence: an unsolved task is the loop's target,
not its veto.

The floor is unchanged everywhere it has signal. A candidate that goes
2/3 where the incumbent goes 1/3 is still rejected as unreliable, and a
generation where NO task resolved anywhere is now `insufficient_evidence`
rather than an efficiency verdict over runs that all failed.

promotion.json goes to schema_version 4 — task rows changed meaning, and
a stale v3 binding must not be applied under the new rule.
2026-08-01 17:07:14 +00:00
Gergo Magyar
5a017f2722 feat(eval): report evolution progress while the generation is still running
Run 29907431284 printed its whole 14h45m of output at one timestamp
(00:02:59.32) as the process exited: stdout is a pipe, so CPython
block-buffered it, and there was no way to tell a live run from a wedged
one. Three changes make the lane observable in the Actions log:

- PYTHONUNBUFFERED for the driver (workflow step) and for the benchmark
  subprocess (its env is an explicit minimal dict and inherits nothing),
  so lines reach the log when they are written.
- run_managed grows `echo_stdout`, a passthrough that streams a child's
  stdout to stderr as it arrives while leaving the bounded tail intact.
  evolve.py enables it for the benchmark sweep — the multi-hour phase,
  whose per-run lines previously surfaced only as a tail, and only on
  failure. It stays off everywhere else: a Claude session's stdout is the
  evidence stream and is written out only after redaction.
- The sweep now announces each cell as it starts (`3/18, 47m elapsed`)
  and reports `took=` and `error_kind=` when it finishes, so an excluded
  run — the thing that actually blocks promotion — is visible live
  instead of only in results.jsonl. evolve.py also reports the proposer's
  duration, turns, and cost once the proposal lands.
2026-08-01 17:01:03 +00:00
Gergő Magyar
e1df209367
Merge branch 'main' into fix/skill-evolution-gate 2026-08-01 17:54:38 +01:00
Gergo Magyar
bb09ce28e0 fix(eval): stop discarding completed benchmark sessions as unverifiable
The evolution loop has not been able to promote anything since it went
online. Run 29907431284 (the last green run) reached the gate and threw
away 5 of its 18 runs, and the gate requires zero excluded runs in both
paired arms — so the generation could never produce a verdict on merit.

Two causes, both in the session layer:

1. Claude Code drains background-task bookkeeping after the final result
   event (`background_tasks_changed`, `task_updated`, `task_notification`,
   all `type: "system"`). The parent-stream check required the result to
   be the literal last event, so three sessions that had exited 0 with a
   complete result and usage payload were recorded as session errors.
   Trailing `system` events carry no tool_use/tool_result/usage payload
   and cannot forge skill or cost evidence; anything else after the
   result still fails closed.

2. The 3600s per-session ceiling killed two `workflow` incumbent runs on
   inv-bug-pdg-note mid-verification. Successful `workflow` rows in the
   same run finished in ~1600-2600s across both sessions, so the ceiling
   moves to 5400s and now lives in one shared constant instead of two
   argparse defaults that could drift apart.

Also marks the activation checklist against reality: the secrets, the
Environment, the runner, and the validation dispatch are all in place;
the repository variable GITNEXUS_EVOLUTION_ENABLED is the one remaining
gap, and until it is set the Saturday cron skips the job in seconds while
the EventBridge schedule still starts the runner for the day.
2026-08-01 16:45:48 +00:00
MyShining
1147646518
feat(spring): model AOP transactions, caching, and security (#2783)
* feat(spring): model AOP advice and proxy behavior

* fix(spring): address AOP review findings

---------

Co-authored-by: Shining <xuenning@qiyi.com>
2026-08-01 17:22:12 +01:00
ChunxueLi
99291891b7
feat: make MAX_CALLABLE_VALUE_TARGETS configurable via env (#2725)
* feat(scope-resolution): make MAX_CALLABLE_VALUE_TARGETS configurable via env

The branch's original commit was a whole-file snapshot taken at a stale base
and never touched the constant, so the env read was missing and the branch's
own test failed. Implemented here, matching the sibling
GITNEXUS_MAX_PROPERTY_DISPATCH_FANOUT knob.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* test(callable-value-flow): add env override tests

* docs(callable-value-flow): document GITNEXUS_MAX_CALLABLE_VALUE_TARGETS env

Adds a Troubleshooting subsection to README.md and a commented entry to
gitnexus/.env.example for the new per-callable-site dispatch-target cap
(default 32), following the maintainer's review request to document the
knob alongside its implementation.

---------

Co-authored-by: Gergo Magyar <gergomagyar0@gmail.com>
Co-authored-by: Claude Opus 5 (1M context) <noreply@anthropic.com>
Co-authored-by: Ubuntu <ubuntu@localhost.localdomain>
Co-authored-by: Gergő Magyar <gergomagyar@icloud.com>
2026-08-01 12:42:36 +01:00
Karl Lehenbauer
bebb1d2367
fix(schema): declare Swift member-containment pairs in CONTAINS DDL (#2769)
* fix(schema): declare Swift member-containment pairs in CONTAINS DDL

* fix(schema): declare remaining Rust impl/trait and JS/TS object-literal HAS_METHOD pairs; guard streamed emit sinks against undeclared pairs (PR #2769 review)

* refactor(schema): share one declared-pairs constant across router and sinks

DECLARED_REL_PAIRS was being computed independently in three places
(csv-generator.ts, graph-emit-sink.ts, pdg-emit-sink.ts) from the same
static RELATION_SCHEMA parse. Export the existing constant from
csv-generator.ts (already imported by both sinks) instead.

assertDeclaredPair now takes the pre-built pairKey rather than the two
labels, since every caller (RelPairRouter.route, both sinks' addRelationship)
needs that same key immediately after for its own Map/stream lookup on the
per-streamed-edge hot path — avoids rebuilding the template string twice
per edge.

Also drops two schema.test.ts assertions that duplicated coverage already
in the more narrowly-named regression tests below them, and trims the v32
ladder comment to point at assertDeclaredPair's docstring instead of
re-explaining the same failure mechanism.

* fix(schema): use replaceAll for the pair-arrow error message (CodeQL)

.replace(str, ...) only touches the first match; CodeQL flags that as
incomplete string escaping regardless of the caller's invariant that
pairKey contains exactly one '|'. replaceAll is equivalent here and
silences the alert.

---------

Co-authored-by: Gergo Magyar <gergomagyar0@gmail.com>
2026-08-01 12:35:37 +01:00
ChunxueLi
c238085676
feat: make MAX_PROPERTY_DISPATCH_FANOUT configurable via env (#2726)
* feat(scope-resolution): make MAX_PROPERTY_DISPATCH_FANOUT configurable via env

* test(property-dispatch): add env override tests

* docs(scope-resolution): document GITNEXUS_MAX_PROPERTY_DISPATCH_FANOUT in README and .env.example

Add a dedicated troubleshooting subsection and .env.example entry for the
GITNEXUS_MAX_PROPERTY_DISPATCH_FANOUT environment variable, matching the
format used by the sibling GITNEXUS_MAX_CALLABLE_VALUE_TARGETS knob.

Closes maintainer request: "Could you please document this in the readme
plus the .env.example?"

---------

Co-authored-by: Ubuntu <ubuntu@localhost.localdomain>
2026-08-01 12:18:07 +01:00
Void Freud
0f78179e7f
fix(jvm): enforce proximity-bounded sibling injection (#2732)
* fix(jvm): bound same-package sibling injection

* docs(jvm): document sibling injection cap

* fix(jvm): mark truncated sibling sets incomplete and bound the merge

Review follow-ups on the sibling injection cap (#2732):

- The cap silently produced a third visibility state. Before it, a file was
  either fully visible (package under 500 files) or fully incomplete; once
  `injectedIds.size` hit the cap, real siblings were dropped while
  `isVisibilityIncomplete` still returned `false`. That flag gates wildcard
  attribution in seven Spring passes (`bean-candidates.ts:199` and the java/
  kotlin bean-metadata, conditionals, config-bindings and DI resolvers), so
  201-500-file packages — exactly this cap's population — resolved wildcard
  annotations against a truncated sibling set with no log signal. Truncation
  now marks the file incomplete and analyze warns once with the affected file
  count.

- The cap only bounded `bindingAugmentations`; the two `typeBindings` merges
  below it still absorbed every sibling, so a class excluded from the binding
  set could still steer receiver/variable type inference through
  `scope.typeBindings`. Both halves now use the same bounded sibling set, and
  the merge iterates that set directly rather than filtering a full rescan, so
  the cap bounds the work as well as the result.

- Path segments are split once per bucket instead of on every pairwise
  proximity comparison — that comparison runs O(files²) per package.

- `JvmPackageFact` was re-declared locally instead of imported from
  `package-facts.js`, where the canonical declaration still serves both
  languages' facades and capture side-channels. Nothing kept the copies in
  sync. Restored the import.

- README/.env.example: `GITNEXUS_MAX_INJECTED_SIBLINGS` does not lift the
  fixed 500-file package skip (including at `0`), and truncation disables
  wildcard attribution for the affected files. Both are now stated.

* test(jvm): restore the language-facade coverage and pin the cap's behaviour

The cap rewrite replaced the per-language harness with generic fixtures,
dropping the Java/Kotlin capture-side-channel and facade coverage (package fact
extraction, the 500-file skip, fail-closed on a file that produced no
ParsedFile) and leaving a proximity fixture whose candidates were already in
order — so it could not tell a working sort from plain truncation of the input.

Restores that harness and adds cap-specific cases on top, driven through the
shared JVM factory. The fixture interleaves near and distant siblings, so the
retained set is only reachable by a working proximity sort. Covers: the exact
capped set, truncation marking the file visibility-incomplete, type bindings
bounded by the same sibling set, the unbounded `0` override staying complete,
and the documented default of 200 applying when the variable is unset.

Each new case fails against the pre-fix implementation.

---------

Co-authored-by: Gergő Magyar <gergomagyar@icloud.com>
Co-authored-by: Gergo Magyar <gergomagyar0@gmail.com>
2026-08-01 09:38:10 +01:00
Void Freud
7ee0df9e55
fix: serialize global registry transactions across processes (#2716)
* fix: serialize global registry mutations

* fix: serialize global registry mutations

* fix: keep registry reads lock-free

* test(registry): document cross-platform lock coverage

* fix(registry): isolate the registry lock's namespace, timeout and diagnostics

Review follow-ups on the global registry lock (#2716):

- The lock took `getGlobalDir()` itself, which is byte-identical to a repo's
  index slot when that repo is rooted at the user's home directory (a real
  dotfiles layout). `runFullAnalysis` holds the per-repo lock across its whole
  pipeline and `acquireIndexLock` is not reentrant, so `registerRepo` /
  `adoptFlatBranchLabel` self-deadlocked until the wait ceiling and then failed
  the analyze. The registry now locks a private `<globalDir>/registry-lock`
  namespace no index slot can ever resolve to.

- The lock inherited the index lock's 10-minute default timeout, sized for
  multi-minute analyze runs. `gitnexus augment` — documented to cold-start in
  under 500ms and shelled out from editor tool-use hooks — reaches it through
  `listRegisteredRepos({ validate: true })`. Registry transactions are
  sub-second, so they now get their own 5s ceiling.

- Contention was silent: no `log`/`onWaitStart` was wired, and the primitive's
  own texts attribute a wait to "another gitnexus analyze", which misnames a
  registry holder. A registry-specific line is emitted on wait start instead.

- On timeout the transaction now proceeds unlocked with a warning rather than
  throwing. The lost-update race it guards was unguarded before this branch, so
  degrading to the old best-effort behaviour beats failing `analyze`/`list`/
  `index` outright — none of which wrap these calls in a handler — on a wedged
  lock.

- `adoptFlatBranchLabel`'s recursive `fs.rm` no longer runs inside the lock;
  only the closing re-read/mutate/write does, mirroring `clean.ts`, which
  deletes the branch directory before calling the locked `removeBranchIndex`.
  A slow delete no longer blocks every registry operation on the machine.

* test(registry): cover the remaining locked mutators and the colliding layout

Three of the five functions the registry lock wraps had no overlap coverage, so
a future narrowing of the lock would go unnoticed. Adds:

- overlapping `removeBranchIndex` calls on two branches of one entry,
- an overlapping `unregisterRepo` / `registerRepo` pair on distinct repos,
- a registration issued while an index lock is held on the global directory,
  which reproduces the home-rooted self-contention the lock namespace fix
  addresses.

Each fails without the corresponding fix: the two overlap tests lose an update
when `withRegistryLock` is bypassed, and the collision test sees the wait
announcement and the degraded-write warning once the lock namespace is reverted
to `getGlobalDir()`. The collision test asserts on those log records rather
than on elapsed time, so it stays deterministic on a slow runner.

* perf(registry): keep the validation walk out of the registry lock

`listRegisteredRepos({ validate: true })` held the global lock across its
read-only validation walk — an `fs.access` per entry, slow on a network mount
or a large registry — even though the common case prunes nothing and writes
nothing. That is the same lock `gitnexus augment` takes on every editor tool
call, so unrelated registry work serialized behind a walk that never touched
the file.

The walk now runs unlocked; the lock is taken only when an entry is provably
gone, and the prune is applied to a snapshot re-read inside it, so a
registration that lands during the walk is no longer clobbered by a stale
write. Same shape as the `adoptFlatBranchLabel` split.

---------

Co-authored-by: Gergő Magyar <gergomagyar@icloud.com>
Co-authored-by: Gergo Magyar <gergomagyar0@gmail.com>
2026-08-01 08:47:14 +01:00
Gergő Magyar
064832f50c
fix(mcp): resolve false FTS-missing warnings in the query tool (#2773)
* fix(mcp): surface resolved repo/branch/indexed-at in the FTS-degraded warning

Turns the generic "FTS indexes missing" message into a diagnostic
that reveals what this MCP session actually resolved, so a CLI/MCP
mismatch or stale-connection theory is visible in the warning text
itself instead of requiring a separate debugging round-trip (#2767).

* fix(mcp): stop swallowing real FTS query errors behind the missing-index message

queryFTSViaExecutor previously collapsed 'index genuinely missing' and
'a real query/connection error occurred' into the same silent null,
so a real failure could masquerade as the generic FTS-degraded
message with no diagnostic trail — even when it happened on only
some of the per-table queries while others succeeded. Classifies the
failure (mirroring queryFTS's own check for this exact cypher call),
always logs a non-benign error server-side regardless of overall
outcome, and surfaces it (redacted) in the client warning only when
every table failed (#2767).

* fix(mcp): give --repair-fts a dedicated freshness signal for warm readers

--repair-fts intentionally never restamps indexedAt (it doesn't
regenerate the graph), so a long-lived MCP session's pool staleness
check had no explicit signal that a repair happened, only the
incidental file-identity delta. Reuses the existing (forensic-only)
capabilities.fts.status field: repair-fts now stamps just that
sub-field (everything else byte-identical), and ensureInitialized
compares it as a third, independent reinit trigger alongside the
existing stamp/identity checks, seeded at cold init too so a fresh
process's first warm check doesn't false-trigger (#2767).

* test(mcp): warm session picks up an out-of-band --repair-fts rebuild (#2767)

New end-to-end integration test: a real writable LadybugDB session
builds an index WITHOUT FTS, a real LocalBackend observes 'FTS
indexes missing' through the real pool, a separate writable session
performs the exact repair-fts writes (real createSearchFTSIndexes +
the #2767 capability-only meta stamp), and the SAME still-warm
backend re-queries successfully without a restart — closing the one
end-to-end gap no existing test covered.

Running this against the real engine surfaced a second real message
shape for a missing FTS index ("doesn't have an index with name X",
not just "does not exist") that the U2 classifier didn't recognize —
fixed classifyFtsQueryError to match both, with a regression test
pinning the exact observed string.

* fix(review): address code-review findings on the #2767 FTS fix

- Anchor classifyFtsQueryError to the exception class (mirroring
  isBenignDropFtsIndexError) instead of a bare substring search, so a
  real, differently-classed error that happens to echo the benign
  phrase in its body (e.g. an echoed user query) can't be
  misclassified as a benign missing-index (adversarial review).
- Re-read the on-disk meta immediately before the --repair-fts
  capability stamp write instead of reusing the pre-rebuild snapshot,
  so a concurrent writer (e.g. the HTTP server's background embedding
  checkpoint job) landing mid-repair isn't silently reverted.
- Surface a client-facing partial-result warning (mirroring the
  existing enrichmentDegraded convention) when some FTS tables
  succeed but at least one hits a real error, instead of only logging
  it server-side.
- Update RepoMeta.capabilities' stale 'no programmatic readers'
  docstring now that ensureInitialized reads capabilities.fts.status.
- Widen the warm-session integration test's polling deadline for more
  margin over the production 5s staleness-check throttle.

* fix(ci): drop the cold-init loadMeta call ensureInitialized never needed

It stole the mocked loadMeta call an unrelated upstream PDG test
depends on (test/integration/impact-pdg-statement-precise.test.ts
queues a single mockResolvedValueOnce for its own PDG-config read;
the extra call consumed that slot before the PDG code ran, so it
fell through to the mock's null default and epistemic came back
undefined instead of 'pdg-intra-procedural'). Cold init now leaves
lastObservedFtsStatus unseeded — the cost is at most one redundant
initLbug call on the first warm check, which no-ops via a single
fs.stat when nothing actually changed, not a real reopen.

* fix(review): address tri-review findings on the #2767 FTS fix

Fixes two P1s (misleading repair-fts advice on real query errors;
embedding-checkpoint job silently reverting the capabilities.fts stamp
for up to its 30-minute lifetime), five P2/P3s (stale indexedAt in
warnings, extension-unavailable noise, mismatched log severity, a
table-missing vs index-missing conflation confirmed against a live
LadybugDB, and a reinit-watermark latching bug), and the four residual
items already self-disclosed in this PR's description (shared FTS
error classifier, consolidated per-pool observed-state map, a
redactPaths whitespace gap, and an isolated ftsCapsChanged test).

A /simplify pass afterward caught one more real bug: the
extension-unavailable short-circuit only guarded the MCP pool path,
so the CLI-path fix above it started surfacing spurious non-benign
errors for the same expected degraded state the pool path stays
silent on — now both paths agree.

Co-Authored-By: Claude Sonnet 5 <noreply@anthropic.com>

---------

Co-authored-by: Gergo Magyar <gergomagyar0@gmail.com>
Co-authored-by: Claude Sonnet 5 <noreply@anthropic.com>
2026-08-01 08:42:51 +01:00
azizur100389
84f584449d
fix(python): resolve classes through module imports (#2770) 2026-08-01 06:02:47 +01:00
dependabot[bot]
51095c19f8
chore(deps): bump actions/setup-python from 6.3.0 to 7.0.0 (#2757)
Some checks are pending
Gitleaks / gitleaks (push) Waiting to run
CodeQL / Analyze (javascript-typescript) (push) Waiting to run
CodeQL / Analyze (python) (push) Waiting to run
Publish / Classify release event (push) Waiting to run
Publish / RC guard (marker + release-PR skip) (push) Blocked by required conditions
Publish / ci (push) Blocked by required conditions
Publish / Publish to npm (push) Blocked by required conditions
Publish / Build & Push RC Docker images (push) Blocked by required conditions
Scorecard / Scorecard analysis (push) Waiting to run
Trivy Image Scan / Trivy (gitnexus-cli) (push) Waiting to run
Trivy Image Scan / Trivy (gitnexus-web) (push) Waiting to run
Bumps [actions/setup-python](https://github.com/actions/setup-python) from 6.3.0 to 7.0.0.
- [Release notes](https://github.com/actions/setup-python/releases)
- [Commits](ece7cb06ca...5fda3b95a4)

---
updated-dependencies:
- dependency-name: actions/setup-python
  dependency-version: 7.0.0
  dependency-type: direct:production
  update-type: version-update:semver-major
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2026-07-31 13:05:18 +01:00
azizur100389
454d383416
fix(ingestion): join multi-line closure bindings on initializer startLine (#2735) (#2762)
* fix(ingestion): join multi-line closure bindings on initializer startLine

Graph-node captures sit on the outer binding wrapper while scope-resolution
anchors on the inner callable; the line-only position join missed when those
split across lines and fail-closed dropped the real CALLS edge (#2735).

* fix(ingestion): unwrap Ruby call+block for multi-line lambda joins

Cover Kotlin/Ruby/Dart multi-line closure CALLS in integration tests, and
dig Ruby's call/block field so do-end bindings join on the block start line.

* style(ingestion): format closure join changes

* fix(ingestion): make closure position join language agnostic
2026-07-31 11:58:47 +01:00
dependabot[bot]
d99d828a52
chore(deps)(deps): bump express-rate-limit in /gitnexus (#2764)
Bumps [express-rate-limit](https://github.com/express-rate-limit/express-rate-limit) from 8.6.0 to 8.6.1.
- [Release notes](https://github.com/express-rate-limit/express-rate-limit/releases)
- [Commits](https://github.com/express-rate-limit/express-rate-limit/compare/v8.6.0...v8.6.1)

---
updated-dependencies:
- dependency-name: express-rate-limit
  dependency-version: 8.6.1
  dependency-type: direct:production
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <support@github.com>
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Co-authored-by: Gergő Magyar <gergomagyar@icloud.com>
2026-07-31 10:42:37 +01:00
dependabot[bot]
e0dc0c2d5e
chore(deps): bump release-drafter/release-drafter from 7.5.1 to 7.6.0 (#2756)
Bumps [release-drafter/release-drafter](https://github.com/release-drafter/release-drafter) from 7.5.1 to 7.6.0.
- [Release notes](https://github.com/release-drafter/release-drafter/releases)
- [Commits](4d75298e00...eada3c96a6)

---
updated-dependencies:
- dependency-name: release-drafter/release-drafter
  dependency-version: 7.6.0
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

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Co-authored-by: Gergő Magyar <gergomagyar@icloud.com>
2026-07-31 10:34:51 +01:00
dependabot[bot]
909f2f85b6
chore(deps): bump the codeql-action group across 1 directory with 3 updates (#2755)
Bumps the codeql-action group with 3 updates in the / directory: [github/codeql-action/init](https://github.com/github/codeql-action), [github/codeql-action/analyze](https://github.com/github/codeql-action) and [github/codeql-action/upload-sarif](https://github.com/github/codeql-action).


Updates `github/codeql-action/init` from 4.37.0 to 4.37.3
- [Release notes](https://github.com/github/codeql-action/releases)
- [Changelog](https://github.com/github/codeql-action/blob/main/CHANGELOG.md)
- [Commits](99df26d4f1...e4fba868fa)

Updates `github/codeql-action/analyze` from 4.37.0 to 4.37.3
- [Release notes](https://github.com/github/codeql-action/releases)
- [Changelog](https://github.com/github/codeql-action/blob/main/CHANGELOG.md)
- [Commits](99df26d4f1...e4fba868fa)

Updates `github/codeql-action/upload-sarif` from 4.37.0 to 4.37.3
- [Release notes](https://github.com/github/codeql-action/releases)
- [Changelog](https://github.com/github/codeql-action/blob/main/CHANGELOG.md)
- [Commits](99df26d4f1...e4fba868fa)

---
updated-dependencies:
- dependency-name: github/codeql-action/analyze
  dependency-version: 4.37.3
  dependency-type: direct:production
  update-type: version-update:semver-patch
  dependency-group: codeql-action
- dependency-name: github/codeql-action/init
  dependency-version: 4.37.3
  dependency-type: direct:production
  update-type: version-update:semver-patch
  dependency-group: codeql-action
- dependency-name: github/codeql-action/upload-sarif
  dependency-version: 4.37.3
  dependency-type: direct:production
  update-type: version-update:semver-patch
  dependency-group: codeql-action
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: Gergő Magyar <gergomagyar@icloud.com>
2026-07-31 10:34:35 +01:00
dependabot[bot]
e8e572fbff
chore(deps)(deps): bump i18next from 26.3.0 to 26.3.6 in /gitnexus-web (#2751)
Bumps [i18next](https://github.com/i18next/i18next) from 26.3.0 to 26.3.6.
- [Release notes](https://github.com/i18next/i18next/releases)
- [Changelog](https://github.com/i18next/i18next/blob/master/CHANGELOG.md)
- [Commits](https://github.com/i18next/i18next/compare/v26.3.0...v26.3.6)

---
updated-dependencies:
- dependency-name: i18next
  dependency-version: 26.3.6
  dependency-type: direct:production
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: Gergő Magyar <gergomagyar@icloud.com>
2026-07-31 10:34:16 +01:00
MyShining
de84ad6297
feat(spring): index @Bean factories and @Resource injection (#2740)
* feat(spring): index Bean factories and Resource injection

* fix(spring): address Bean and Resource review findings

* refactor(lbug): keep relation pair parsing in router

* test(lbug): preserve schema exports in WAL mocks

* test(cache): align schema bump pin

---------

Co-authored-by: Shining <xuenning@qiyi.com>
Co-authored-by: Gergo Magyar <gergomagyar0@gmail.com>
2026-07-31 10:33:42 +01:00
dependabot[bot]
5ed9617ff4
chore(deps)(deps): bump @langchain/core in /gitnexus-web (#2749)
Bumps [@langchain/core](https://github.com/langchain-ai/langchainjs) from 1.2.2 to 1.2.3.
- [Release notes](https://github.com/langchain-ai/langchainjs/releases)
- [Commits](https://github.com/langchain-ai/langchainjs/compare/@langchain/core@1.2.2...@langchain/core@1.2.3)

---
updated-dependencies:
- dependency-name: "@langchain/core"
  dependency-version: 1.2.3
  dependency-type: direct:production
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: Gergő Magyar <gergomagyar@icloud.com>
Co-authored-by: Abhigyan Patwari <126312502+abhigyanpatwari@users.noreply.github.com>
2026-07-31 08:59:03 +00:00
dependabot[bot]
c1ee62854a
chore(deps)(deps-dev): bump @babel/types in /gitnexus-web (#2750)
Bumps [@babel/types](https://github.com/babel/babel/tree/HEAD/packages/babel-types) from 8.0.0 to 8.0.4.
- [Release notes](https://github.com/babel/babel/releases)
- [Changelog](https://github.com/babel/babel/blob/main/CHANGELOG.md)
- [Commits](https://github.com/babel/babel/commits/v8.0.4/packages/babel-types)

---
updated-dependencies:
- dependency-name: "@babel/types"
  dependency-version: 8.0.4
  dependency-type: direct:development
  update-type: version-update:semver-patch
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2026-07-31 08:32:45 +00:00
dependabot[bot]
59ea1ce2c8
chore(deps)(deps-dev): bump @types/node in /gitnexus (#2763)
Bumps [@types/node](https://github.com/DefinitelyTyped/DefinitelyTyped/tree/HEAD/types/node) from 26.1.1 to 26.1.2.
- [Release notes](https://github.com/DefinitelyTyped/DefinitelyTyped/releases)
- [Commits](https://github.com/DefinitelyTyped/DefinitelyTyped/commits/HEAD/types/node)

---
updated-dependencies:
- dependency-name: "@types/node"
  dependency-version: 26.1.2
  dependency-type: direct:development
  update-type: version-update:semver-patch
...

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2026-07-31 07:58:11 +01:00
dependabot[bot]
c0f2eb594e
chore(deps)(deps-dev): bump @vitejs/plugin-react in /gitnexus-web (#2753)
Bumps [@vitejs/plugin-react](https://github.com/vitejs/vite-plugin-react/tree/HEAD/packages/plugin-react) from 6.0.2 to 6.0.4.
- [Release notes](https://github.com/vitejs/vite-plugin-react/releases)
- [Changelog](https://github.com/vitejs/vite-plugin-react/blob/main/packages/plugin-react/CHANGELOG.md)
- [Commits](https://github.com/vitejs/vite-plugin-react/commits/plugin-react@6.0.4/packages/plugin-react)

---
updated-dependencies:
- dependency-name: "@vitejs/plugin-react"
  dependency-version: 6.0.4
  dependency-type: direct:development
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2026-07-31 07:57:50 +01:00
dependabot[bot]
7890798192
chore(deps)(deps-dev): bump @types/node in /gitnexus-web (#2752)
Bumps [@types/node](https://github.com/DefinitelyTyped/DefinitelyTyped/tree/HEAD/types/node) from 25.9.5 to 26.0.1.
- [Release notes](https://github.com/DefinitelyTyped/DefinitelyTyped/releases)
- [Commits](https://github.com/DefinitelyTyped/DefinitelyTyped/commits/HEAD/types/node)

---
updated-dependencies:
- dependency-name: "@types/node"
  dependency-version: 26.0.1
  dependency-type: direct:development
  update-type: version-update:semver-major
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2026-07-31 07:57:31 +01:00
Gergő Magyar
27ab37c432
feat(resolution): type receiver chains from AST structure across all 14 languages (#2708) + epistemic lower-bound (#2744) (#2747) 2026-07-31 07:12:57 +01:00
Gergő Magyar
9c24e3459e
fix(rust): qualify items by their enclosing mod chain so same-named ones stay distinct (#2742) (#2745)
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* fix(rust): let the qualified-call filter see inline modules

The negative filter added in #2741 builds its set of known module names from
FILE PATHS, so an inline `mod x { … }` — which appears in no path — was absent
from it. Every module-qualified call into an inline module was therefore
rejected before any candidate channel ran, which is a hole in that optimisation
rather than in the resolution logic it guards.

The per-pass index now unions the file-derived names with inline module names
taken from the scope model: a `mod` declaration binds a `Namespace` def locally
in the declaring scope, and that binding is the only place an inline module's
name exists. Collected in the same walk that already builds the module → scope
map, so it costs no extra pass.

Found while fixing #2742, where a correctly resolved call into `mod inner { … }`
still could not reach its target.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01J5nWP4BFeBSjbQ3uqAjtxV

* fix(scope-resolution): try the namespace-prefixed node key before the bare one

`resolveDefGraphId` looked up the plain `qualifiedName` key first and only
retried with the `namespacePrefix`-qualified key afterwards. For the defs that
carry a prefix the qualified name is a bare TAIL, so the plain key happily
matched a same-named item at a different namespace depth in the same file and
returned it before the more specific retry was ever reached.

The namespace-prefixed key is strictly the more specific of the two, so it is
now tried first. Where no such node exists the lookup falls through to exactly
the previous order, which keeps the #1982 behaviour this retry was added for.

Without this, a call into `mod inner { fn dispatch }` resolved to the correct
definition and then mapped it onto the crate-root `fn dispatch` node — the
self-loop #2742 describes.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01J5nWP4BFeBSjbQ3uqAjtxV

* fix(rust): qualify items by their enclosing mod chain so same-named ones stay distinct (#2742)

Node identity is `<label>:<file>:<qualifiedName>` and carried no module path, so
an inline `mod inner { fn dispatch }` and a crate-root `fn dispatch` in the same
file collapsed onto `Function:<file>:dispatch`, first-wins. Resolution already
picked the right definition — the target simply was not representable, so a
correct resolution still rendered as a self-loop and `impact` reported the real
callee as unreached.

The mechanism already existed: `qualifyRustImplTargetByModScope` has walked
`mod_item` ancestors for impl targets since #1982. Generalised to
`qualifyByEnclosingModScope` and applied to free items, so
`mod inner { fn dispatch }` becomes `Function:<file>:inner.dispatch`. Keyed
purely on the `mod_item` node type, exactly as the impl qualifier already was,
so it is a no-op for every language whose grammar has no such node.

Two constraints found by tests rather than by reading, both now encoded:

  - The helper normalised `::` to `.` unconditionally. With no enclosing `mod`
    that rewrote a top-level `impl a::Inner` from `a::Inner` to `a.Inner` and
    moved its node id away from the one the HAS_METHOD owner edge emits,
    breaking the #1975 scoped-impl ownership. It now returns raw text untouched
    when there are no mod segments, which also makes the change strictly
    additive for every id that has no enclosing module.

  - Qualification is scoped to items with no enclosing class/impl. A method
    already carries its owner's name, and that owner's id is mod-scoped by the
    impl qualifier, so qualifying the method again breaks the same byte-for-byte
    agreement. Same-named methods on same-named types in sibling modules
    therefore still collapse — a narrower residual than the free-item case fixed
    here, and one belonging to the owner edge rather than to this path.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01J5nWP4BFeBSjbQ3uqAjtxV

* fix(storage): bump schema versions for the mod-qualified Rust node ids (#2742)

`INCREMENTAL_SCHEMA_VERSION` 24 -> 25 and `SCHEMA_BUMP` 31 -> 32.

Node ids change for every Rust item inside any `mod` block, and
`#[cfg(test)] mod tests` makes that close to every Rust repository. A pre-v25
index therefore holds ids an incremental top-up cannot reconcile — the old nodes
would simply be stranded — so the reuse gate has to force a full re-analyze. The
qualified name is computed in the parse worker, so a warm parse cache would
likewise replay the old unqualified ids and keep the collapse.

This branch originally claimed v24; #2708 took that number and merged first, so
it is renumbered to v25 here. That is exactly the collision the v29 note in
parse-cache.ts warns about, and re-checking against origin/main at rebase time
rather than at branch time is what caught it. #2708 did not touch `SCHEMA_BUMP`,
so 32 is free.

The version-pin test moves with the bump by design, including the new pre-v25
row in the reuse-gate table.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01J5nWP4BFeBSjbQ3uqAjtxV

* fix(rust): stop mod-qualifying container ids while their owner edges stay bare (#2745 review)

#2742 re-keyed Rust node ids by the enclosing `mod` chain. The mint moved; the
owner-edge anchor did not. `findEnclosingClassInfo` mints a member's owner id
from the container's BARE `nameNode.text` and only follows a qualified shape when
the provider sets `classExtractor.qualifiedNodeId`, which Rust does not.

So every `struct` / `trait` / `enum` / `impl` declared directly inside a `mod`
got a node id that none of its member edges pointed at. Five lines of idiomatic
Rust were enough:

    pub mod engine { pub struct Config { pub retries: usize } }

    NODE     Struct:src/lib.rs:engine.Config
    DANGLING HAS_PROPERTY Struct:src/lib.rs:Config -> Property:src/lib.rs:Config.retries

The rows are discarded by the IGNORE_ERRORS COPY retry, so the struct silently
lost every field. A trait impl inside a `mod` additionally dropped its
METHOD_IMPLEMENTS edge outright.

The same gap put `impl a::Inner` inside a `mod` back on the #1975 rake that
`qualifyByEnclosingModScope`'s own docblock warns about. The impl-target branch
deliberately fires only for an UNSCOPED `type_identifier`; the new gate had no
such restriction and picked up the scoped targets that branch had just excluded,
minting `Impl:<file>:outer.a.Inner` against an anchor still reading
`Impl:<file>🅰️:Inner`.

The member side was already excluded via `!enclosingClassInfo`. This adds the
owner side, gated on `MEMBER_OWNER_NODE_TYPES` — derived from
`CLASS_CONTAINER_TYPES`, which is already the single source of "this node type
owns member edges" and already carries an INVARIANT note binding it to
`CONTAINER_TYPE_TO_LABEL`. A language adding a container therefore cannot gain a
mismatched id shape here without also failing that invariant. Keyed purely on
tree-sitter node types, so no language name enters shared ingestion.

`union_item` is listed too: its fields are captured as Property but it is not a
recognized owner, so they carry no HAS_PROPERTY edge and cannot dangle — it is
here so a union's id keeps the same shape as the struct beside it.

Containers still collapse across sibling modules, exactly as before this fix.
That residual belongs to the owner edge, and is not worked around here.

Regression tests use the UNFILTERED `findDanglingEdges(result)`. Every other
dangling assertion in `rust.test.ts` passes `['HAS_METHOD']`, which is precisely
why the HAS_PROPERTY breakage shipped with a green suite. They assert the NODE
id rather than only the edge's anchor, because the anchor was already bare while
the bug was live — an edge-only assertion passes in both builds. All four fail
when the new gate clause alone is reverted.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_019GvVxWt1ShhEP8CiMj3b6Z

* fix(rust): resolve modules nested inside an inline mod (#2745 review)

The #2730 self-loop survived one `mod` deeper:

    pub mod outer {
        pub mod tools { pub fn dispatch() {} }
        pub fn dispatch() { tools::dispatch(); }
    }

    CALLS outer.dispatch -> outer.dispatch          <- the #2730 symptom
    NODE  outer.tools.dispatch                      <- correct target, unlinked

Two gates were blind to a nested inline module, so the hook refused and the shared
lexical tier bound the call to the enclosing same-name `dispatch`:

`knownModuleNames` was collected by walking `moduleScopeByFile`, which maps a file
to its ROOT `Module` scope only. A `mod` nested inside an inline `mod` binds in the
parent module's scope, so the walk saw depth-1 inline modules and missed every
nested one — `tools` never entered the set and the negative filter rejected the
qualifier before any candidate ran.

`declaresSubmodule` had the same root-only assumption, so even with the name known
the candidate `outer::tools` was never yielded.

Both now read the def index. Names come from every `Namespace` def; inline module
PATHS are derived from the members' `namespacePrefix` rather than from the `mod`
defs, because a `mod` def carries no nesting information of its own — inside
`mod outer { mod tools { … } }` the inner def is `qualifiedName: 'tools'` with NO
`namespacePrefix`, while every def within it is stamped `outer.tools`. A
`Namespace` scope also owns its OWN def rather than its children's, so the scope
tree cannot answer this either: the `mod outer` scope lists `outer`, never `tools`.

Restricted to non-empty prefixes, so this stays a DECLARATION check. Including
file-derived modules would let an undeclared or `cfg`-gated file on disk outrank a
real `use` binding — the regression #2741's review already fixed once. File-backed
submodules therefore keep going through the binding check.

A module with no defs at all is absent from the set, which is harmless: it has no
member for a qualified call to resolve to.

Cost is one pass over an already-resident def index, memoized per resolution pass
on the existing WeakMap — the same order of work as the binding walk it replaces,
and it subsumes it. `isLocalNamespaceBinding` was going to single-source the
duplicated "locally declared submodule" predicate the review flagged; deriving
paths from members removed the second copy outright instead.

Regression fixture covers depth 2 and depth 3, so the fix is depth-agnostic rather
than depth-2 special-cased.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_019GvVxWt1ShhEP8CiMj3b6Z

* fix(rust): let an imported type outrank a same-named module (#2745 review)

Widening the negative filter to inline `mod` names let a type-qualified call
through whenever a module happened to share the type's name. The
crate-root-relative candidate then captured it:

    // src/lib.rs
    pub mod Buffer { pub fn with_capacity() -> usize { 111 } }
    // src/b.rs
    use crate::c::Buffer;                        // the real target lives in c.rs
    pub fn call() -> usize { Buffer::with_capacity() }

    base: (no CALLS edge — unresolved)
    PR:   CALLS b::call -> Function:src/lib.rs:Buffer.with_capacity   <- fabricated

`ids.ts` states the doctrine this broke: a missing edge is the correct failure
direction for a graph whose consumers include `impact`; a fabricated caller is not.
The base produced the missing edge and the PR produced the fabricated one.

That third candidate is the loosest of the three — a guess at a crate-root-relative
path the caller never wrote, kept for 2015-edition style. In Rust 2018 a bare first
segment resolves in the CALLER's module, so a local binding for that segment
settles the question: it is now skipped when the head names anything non-module in
the caller's own module. Candidates 1 and 2 are untouched, and they run first, so
the legitimate `use crate::tools;` path is unaffected.

The binding lookup goes through `lookupBindingsAt`. A first attempt read
`Scope.bindings` directly and the guard never fired: a `use` binding is finalize
OUTPUT and absent from the scope's own local table, which is exactly the
imported-type case being guarded. Contract I8 in `contract/scope-resolver.ts`
requires that channel anyway.

The regression test asserts the forbidden TARGET rather than an empty edge set, and
separately asserts the module member still exists as a node — otherwise the test
would pass just as well if the call went unresolved for some unrelated reason, or
if the module node disappeared entirely.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_019GvVxWt1ShhEP8CiMj3b6Z

* fix(scope-resolution): try the namespace-prefixed name on the TAGGED keys too (#2745 review)

`resolveDefGraphId` gained a namespace-prefixed retry for the plain qualified key
in this PR, but the five tagged keys above it — template constraints, parameter
types, parameter shape, arity, template arguments — kept composing from the bare
`qualifiedName`.

For a namespace- or `mod`-qualified def those keys are simply dead:
`node-lookup.ts` registers them under the QUALIFIED name (`inner.dispatch#0`)
while this side built `dispatch#0`. The keys exist to separate overloads, so a
mod-scoped overload set was relying on whichever later key happened to catch it.

Verified as a miss rather than a mis-hit before changing anything — an end-to-end
run with a crate-root decoy of the same name and arity binds correctly — so this
is hygiene, not a live bug. Worth doing while the code is open rather than leaving
five keys dead and the behaviour dependent on fallback order.

Both name forms now go through one `lookupTagged` helper, most specific first, so
a sixth tagged key cannot be added with the bare form only. That also removes the
five hand-repeated `qualifiedKey(...)` / `nodeLookup.get(...)` pairs.

Also pins the C++ `EXTENDS` retarget this PR's reorder produces.
`cpp-two-phase-dependent-base-cross-ns-deep` declares a global `Inner` decoy
alongside `ns:🅰️🅱️:Inner`; the base's `qualifiedName` is a bare `Inner` with the
path on `namespacePrefix`, so only the prefixed key separates them, and only if it
runs first. The improvement was riding unasserted in a Rust-scoped PR.

The captures golden covers every `rust-*` fixture, so the three fixtures added by
this review series drift it; regenerated with UPDATE_GOLDEN=1.

Verified: 785 tests across cpp / csharp / rust resolvers and the
callable-id-lockstep unit test.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_019GvVxWt1ShhEP8CiMj3b6Z

* fix(rust): keep a mod declared inside a fn from hoisting above the callable (#2745 review)

`fn wrapper() { mod helper { fn dispatch } }` minted
`Function:<file>:helper.wrapper.dispatch@2:8` — the mod segment composed OUTSIDE
the enclosing-callable prefix, inverting the real nesting.

Nothing dangled: the `@line:col` suffix already makes a function-local callable's
id unique, which is also why the mod segment adds no identity in this position. The
path simply read as a lie about the source. It is now skipped rather than
reordered — interleaving two qualifier passes to fix the order would be real
machinery for a shape whose ids are already unique.

Also folds in the three documentation and structure findings from the same review:

- The 4-clause gate is extracted to a named `qualifiesByEnclosingModScope`, matching
  the two conditions directly above it in the same function, which were already
  named consts.
- `qualifyByEnclosingModScope`'s docblock documented only the impl-target contract
  even though the generalized name has had a second, looser caller since #2742. It
  now states both, and says which gate belongs to which — that gap is what let the
  #1975 scoped-impl regression through in the first place.
- The "cheap rejection BEFORE any index work" comment was no longer true:
  `passIndexFor` walks the def index on its first call in a pass. Corrected rather
  than left to mislead the next reader into thinking the filter is free. What it
  still buys — skipping the per-site candidate search, the part that scales with
  the workspace — is stated instead.

Verified: 279 tests across the Rust resolver suite and the Rust scope-resolution
unit tests. Captures golden regenerated for the extended fixture.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_019GvVxWt1ShhEP8CiMj3b6Z

* test(storage): move main's SCHEMA_BUMP pin to 32 for the mod-qualified ids (#2745 review)

`#2736` added a pin asserting `SCHEMA_BUMP === 31` on main, which arrived on this
branch through the merge of main while `0062a5c2` had already bumped the constant
to 32. Neither side conflicted textually — the pin and the constant live in
different files — so the merge was clean and the test failed instead.

That is the pin working as designed: it exists so a bump cannot ride along
unnoticed, and this is the fifth time a SCHEMA_BUMP collision has been caught by a
guard rather than by review. Updated to 32 with the reason recorded inline.

`INCREMENTAL_SCHEMA_VERSION` needs no second bump: 25 was introduced by this
unmerged branch, so no released index carries it, and its own pin in
`call-summary-schema-version.test.ts` is already consistent.

Verified: 119 tests across the parse-cache, schema-version, incremental-orchestration
and the two identity suites that arrived with the merge.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_019GvVxWt1ShhEP8CiMj3b6Z

* test(bench): rebaseline the Rust capture fingerprint for the three new fixtures (#2745 review)

CI caught what I missed:

    [scope-capture --check] FAIL: rust: capture fingerprint drift
      (got 05acbaca..., expected 90fda086...)   fixture_count 202

`bench/scope-capture` fingerprints the whole `rust-*` fixture corpus, so the three
fixtures added by this review series drift it. I rebaselined the
`rust-captures-golden` snapshot and stopped there — a new fixture is a call site of
BOTH, and updating only one is how this reached CI red.

This is the same class as PR #2743's headline finding, from the other direction: an
id-shape change makes every synthetic corpus a call site, and the author fixed the
unit-test fixture and missed the bench. Here it is a fixture-count change rather
than an id-shape change, and the review that flagged the #2743 lead as "REFUTED,
bench/ has no Rust node-id corpus" was right about node ids and wrong about the
corpus fingerprint. Noted for the next author in the baseline entry itself.

Verified as pure corpus growth rather than a capture-logic shift: removing ONLY the
three new fixture directories and re-running reproduces the prior fingerprint
exactly (196 fixtures, capture_groups_fp 3432), and restoring them gives the new
one (202, 3556). `emitRustScopeCaptures` is untouched by this series. Scaling 1.022
local / 1.057 CI, well inside the 1.5 budget.

`bench/python-scope` globs `python-*` only and is unaffected; no other bench walks
the Rust corpus. `--check` now PASSes for all 15 languages.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_019GvVxWt1ShhEP8CiMj3b6Z

---------

Co-authored-by: Gergo Magyar <gergomagyar0@gmail.com>
Co-authored-by: Claude Opus 5 (1M context) <noreply@anthropic.com>
2026-07-30 17:08:00 +01:00