Commit graph

1498 commits

Author SHA1 Message Date
gitnexus-release-bot[bot]
3a642341e2 release: v1.6.10-rc.45 2026-07-17 16:54:35 +00:00
Gergő Magyar
ed8ab1c246
fix(scope-resolution): resolve callable reference flows (#2437) (#2522)
Some checks are pending
CodeQL / Analyze (python) (push) Waiting to run
CodeQL / Analyze (javascript-typescript) (push) Waiting to run
Gitleaks / gitleaks (push) Waiting to run
Publish / Classify release event (push) Waiting to run
Publish / RC guard (marker + release-PR skip) (push) Blocked by required conditions
Publish / ci (push) Blocked by required conditions
Publish / Publish to npm (push) Blocked by required conditions
Publish / Build & Push RC Docker images (push) Blocked by required conditions
Scorecard / Scorecard analysis (push) Waiting to run
Trivy Image Scan / Trivy (gitnexus-cli) (push) Waiting to run
Trivy Image Scan / Trivy (gitnexus-web) (push) Waiting to run
* docs(plans): add provider-hook value-refs plan (#2437)

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* docs(plans): deepen #2437 plan to USES + property-dispatch design

Design revised after prior-art research (Kythe ref vs ref/call, Joern
METHOD_REF, Feldthaus field-based call graphs, CodeQL impliedReceiverStep):
registration sites emit reference-class USES, invocation is recovered by a
field-based property-dispatch pass synthesizing CALLS at member-call sites.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* feat(scope-resolution): model provider-hook value references (#2437)

Functions referenced as object-literal property values (provider hooks like
emitScopeCaptures: emitCppScopeCaptures) previously produced no edge at all,
so impact/context reported a false-safe 0 upstream dependents.

Two coordinated halves, per prior art (Kythe ref vs ref/call, Joern
METHOD_REF, Feldthaus ICSE'13 field-based call graphs, CodeQL
impliedReceiverStep):

- Registration -> USES: new ReferenceKind 'value-ref'; TS/JS queries capture
  pair values and shorthand properties (with @reference.property-key);
  emitted as a reference-class USES edge, reason 'scope-resolution:
  value-ref'. Resolution is callable-gated so plain values emit nothing.
- Dispatch -> CALLS: new shared pass emitPropertyDispatchCalls synthesizes
  CALLS (reason 'property-dispatch', confidence 0.7, per-key fan-out cap 32
  calibrated on this repo's 16-provider hook tables) from member-call sites
  to every function registered under the same property key.

Deviation from plan: the pass owns value-ref resolution entirely via the
post-finalize findCallableBindingInScope walker — the shared registries only
see pre-finalize local bindings, so imported hooks (the c-cpp.ts case) were
unresolvable through lookupForSite; Reference.propertyKey passthrough
dropped as unnecessary.

SCHEMA_BUMP 13 -> 14: ParsedFile gains value-ref sites + propertyKey.

Verified end-to-end: impact(emitCppScopeCaptures, upstream) now reports 8
impacted / HIGH with extractParsedFile (true dispatch caller) at d=1 via
property-dispatch and the c-cpp.ts registration via USES.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* test(scope-resolution): cover value-ref registration and property dispatch (#2437)

Integration: same-file/cross-file/aliased/shorthand registrations emit USES;
non-callable and destructuring values emit nothing; dispatch sites gain
property-dispatch CALLS (incl. JS twins and per-language partitioning);
fan-out-capped keys are dropped entirely; factory-call values unchanged.
Unit: capture-shape pins for @reference.value-ref + @reference.property-key.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* fix(scope-resolution): surface dropped property-dispatch keys in stats (#2437)

Review finding: skippedKeys was returned but discarded — a hook table
larger than the fan-out cap silently reopened the #2437 gap for those
keys. Log dropped keys and fold value-ref USES + dispatch CALLS into
referenceEdgesEmitted.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* docs(plans): add callable reference-flow implementation plan

* fix(scope-resolution): close property-dispatch review gaps

* feat(scope-resolution): add callable flow facts

* feat(scope-resolution): resolve callable value flow

* feat(scope-resolution): resolve callable references across providers

* fix: harden callable reference flow resolution

* fix(scope-resolution): preserve callable binding semantics

* docs(plans): add pr-2522-review-fixes plan

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* fix(storage): bump INCREMENTAL_SCHEMA_VERSION for callable-value-flow edges

Callable-value-flow CALLS/USES edges (#2437) can connect two files whose
content did not change, but the incremental write set only covers changed
files — a top-up against a pre-v7 index would silently omit the new edges
for every unchanged file pair, indefinitely. Force the one-time full
re-analyze (review finding 1, #2522).

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* fix(storage): sanitize callable-flow sites per-site at load, log drops

The load-time validator rejected the WHOLE ParsedFile when one site was
malformed or over-bound, with no logging — and C++ legitimately emits
empty-string parameterTypes entries ('' = unknown, the
ReferenceSite.argumentTypes convention) for cv-only/ERROR-recovered types,
so real repos fell into a permanent, silent warm-cache-miss reparse loop
through the #1983-sensitive main-thread path (review finding 7, #2522).

Now: '' entries are valid in type arrays; a malformed/over-bound site drops
only itself (counted, warned once per load); only non-array garbage —
evidence the serialization itself is untrustworthy — rejects the file.
Deviation from plan §6 wording: validator-side tolerance replaces emit-side
clamps — smaller diff, same asymmetry closed at the single chokepoint.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* fix(scope-resolution): keep declarations in the union for reassigned callable cells

The binding-lookup suppression for fact-constrained cells was wholesale:
reassigning a declared function through its own name (greet = other;
greet()) deferred the call to the solver, which then refused the lexical
lookup that resolves the declaration — an unresolvable RHS yielded zero
CALLS for a call that resolved pre-flow (review finding 8, #2522).

Suppression now applies only to cells bound by FORMAL facts — its actual
purpose (a parameter whose grammar emits no declaration binding must not
adopt a same-named outer function). Copy/alias/store/load destinations keep
their declaration as an inclusion seed (Andersen-style union).

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* fix(scope-resolution): count forfeited deferred sites in the budget-bailout warning

On work-budget exhaustion the deferred invoke sites end the run with zero
CALLS — free-call fallback and reference emission already skipped them —
but the warning said 'ordinary graph emission remains untouched', which is
false for exactly those sites. The warning context now carries the
unresolved deferred-site count and the comment states the real cost
(review finding: budget-bailout honesty, #2522).

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* feat(scope-resolution): surface dropped property-dispatch keys in stats and warn payload

The over-cap warning carried only a count; the dropped key NAMES were
discarded and RunScopeResolutionStats had no field, so the PR-body claim
'includes them in resolver statistics' was unimplemented (review finding,
#2522; reviewer ask on the fan-out cap). The warn payload now names up to
20 dropped keys and the stats carry propertyDispatchSkippedKeys.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* refactor(scope-resolution): drop producer-less ownerQualifiedName from formal sites

No capture emitter anywhere produces @callable-flow.owner-qualified-name —
the solver branch consuming it was unreachable in production, yet the field
was typed, parsed, validated, and unit-tested with hand-built input (review
finding 16, #2522; YAGNI). Re-add with a real producer if C++ qualified
member declarators ever need it.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* refactor(scope-resolution): drop dead callable-flow knobs

CallableFlowPassingMode 'callable-object' had no producer and no consumer
distinguishing it, and CallableFlowCaptureOptions.extractCallArguments had
no language providing it (unlike its live sibling extractCallCallee) —
review finding 17, #2522 (YAGNI). The invocation-kind 'callable-object'
is a different, live concept and stays.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* fix(ingestion): bind subscripted callable cells to the container, not the index

terminalIdentifier iterates children in reverse, so tbl[i] = handler seeded
the INDEX variable's cell (polluting a same-named formal) and tbl[i](7)
looked up the callee under i in a different scope — no join, no CALLS edge
for the classic function-pointer-array dispatch (review finding 12, #2522).
Subscript nodes now recurse into their container field only, in both
bindingIdentifier and terminalIdentifier, across the fielded grammars
(C/C++/JS/TS/Python/Go/Java).

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* fix(ingestion): make cross-function file-scope callable bindings resolvable

Two stacked gaps killed the canonical C callback-registration pattern
(fp assigned in init(), called in run()) — the exact #2437 false-safe this
PR exists to fix (review finding H1, #2522):

1. isVisibleValueBinding only consulted assignment regions and formals, so
   a call in a function OTHER than the assigning one emitted no invoke
   fact. A declared callable-typed binding is now a value binding wherever
   its declaration is visible (visibleCallableSignature).
2. The C scope query had no @declaration.variable pattern for function-
   pointer declarators — void (*fp)(int); created no scope-tree binding,
   so the seed (init) and invoke (run) cells canonicalized to different
   keys and never joined. Both bare and initialized forms now bind.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* fix(c): detect variadic parameters via the named variadic_parameter node

tree-sitter-c materializes '...' as a named variadic_parameter node; the
anonymous-token checks never matched, so variadic function-pointer
signatures were emitted with a wrong fixed arity and no '...' sentinel
(review finding, #2522). C++ is unaffected ('...' stays an anonymous token
there); the token checks remain for such grammars.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* fix(ingestion): emit invoke facts for field-stored callable member calls

The C ops-vtable pattern (o->run = handler; o->run(1)) captured the store
but never the call — the member path in emitCallFacts bailed for languages
without protocol methods, and the value-binding index recorded the member
store under the OBJECT's name ('o'), not the member's ('run') (review
finding 11/M3, #2522). Member destinations now also record their terminal
member name, and a member call whose name-cell has a visible store emits an
indirect invoke — gated on the store so plain accessor calls (map.get)
stay inert.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* fix(cpp): disambiguate (obj->*ptr)() ERROR recovery by token order

tree-sitter-cpp groups the recovered '->*' two ways depending on
error-recovery cost (identifier lengths): [identifier, ERROR '->*m'] or
[ERROR 'obj->*', identifier]. The recovery assumed the first shape, so the
second silently swapped receiver/member and dropped the call site — the
committed test passed only by name luck (review finding H2, #2522). The
identifier's position relative to '->*' inside the ERROR now decides roles.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* fix(cpp): class members are never file-local in hasFileLocalCallableLinkage

The name-keyed file-local set is populated from every static declaration,
so an in-class 'static void make();' (external linkage — in-class static
means no-instance) and any member sharing a name with a static free
function were over-marked, refusing legitimate cross-file
declaration/definition joins (review finding 13/M2, #2522). Method and
Constructor defs now bypass the name-set, per the hook's own linkage-only
contract.

Deviation from plan step 13: the regression is a unit-level contract pin
rather than an end-to-end join test — C++ merges out-of-line member
definitions onto the member node by qualified identity, so the graph shape
cannot discriminate the join refusal for members.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* fix(cpp): classify parameter passing mode from the declarator chain only

A whole-subtree scan for reference_declarator inverted copy vs alias:
void reg(void (*cb)(int& out)) marked the by-value pointer cb as
'reference' because of the NESTED parameter's int&, making the solver
back-propagate formal targets into every caller's argument cell — alias
semantics for a copy (review finding 14/M5, #2522). The chain walk never
descends into nested parameter lists; a reference anywhere ON the chain
(int& x, void (*&cb)(int)) still aliases.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* fix(ruby): bare identifiers are calls, not callable references

Ruby parses a receiver-less zero-arg method call identically to a variable
read, so 'action = process' — which CALLS process and stores its return —
seeded action with the callable and minted a wrong CALLS edge from any
dispatch through it, confirmed end-to-end (review finding 15/HIGH, #2522).
New provider knob bareNamesAreCalls: a bare name that is not a provably
local value binding and not an explicit reference form (method(:x),
lambda/proc) emits no flow fact, on both the assignment and argument paths.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* fix(go): pair multi-value := positionally instead of cross-wiring

The shared field fallback took the FIRST LHS identifier and the LAST RHS
identifier of Go's expression_list pair, cross-wiring 'a, b := f, g' and
synthesizing a garbage comma-joined qualified name — the real relationships
were silently dropped (review finding 16, #2522). extractAssignment may now
return multiple pairs; Go pairs list entries positionally and emits nothing
for a length mismatch (multi-return call RHS).

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* fix(java): drop get/test from callableProtocolMethods

'get' and 'test' collide with ubiquitous non-functional-interface APIs
(Map/List/Optional/Future.get), so every ordinary container access emitted
a spurious callable-object invoke fact — high-volume misleading graph facts
with a cross-wiring risk on receiver-name reuse (review finding 17, #2522).
Supplier.get/Predicate.test dispatch is deliberately traded away until the
check can gate on the receiver's declared type.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* fix(rust): pin the qualified-name no-degrade guard as a hard invariant

Rust's scoped_identifier callable-reference capture over-includes unit enum
variants and associated constants (Shape::Square seeds as if callable);
they stay edge-free only because resolveSeedCandidates refuses to degrade
an unresolved qualified name to a simple-name lookup (review finding 18,
#2522). Capture-side type filtering would false-negative on tuple-variant
constructors, so the guard IS the contract: documented as a hard invariant
(Go's mis-shaped multi-value forms also rely on it) and pinned end-to-end.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* fix(php): remove nonexistent optional_parameter node type

tree-sitter-php has no 'optional_parameter' — defaults ride on
simple_parameter — so the entry was dead weight the #1920 literal gate
does not cover for capture-option Sets (review finding 19, #2522).

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* fix(cobol): detect procedure pointers on fixed-format sources

Two stacked defects made the feature a no-op on classic sequence-numbered
fixed format (review finding 20/H3, #2522):
1. parseDataItemClauses' USAGE alternation knew POINTER but not
   PROCEDURE-POINTER/FUNCTION-POINTER, so the dataItems filter was dead.
2. The raw-line fallback scanned UNCLEANED text, where the sequence number
   satisfied the leading digits and the LEVEL NUMBER got captured as the
   pointer name. It now scans preprocessed lines and requires a letter-
   initial name (COBOL data names must contain a letter).
161 COBOL preprocessor/copy-expander tests stay green; free-format matrix
case unchanged.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* fix(cobol): skip comment lines in SET seed/copy scans

A commented-out SET (indicator-column '*'/'/' or free-format '*>')
produced a live seed and a false CALLS edge from dead code (review
finding 21/M1, #2522). The scan now skips indicator-column comment lines
and strips inline '*>' tails before matching.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* docs(architecture): document callable-flow-only mode and skipped-key reporting

The Callable-value flow section omitted scopeResolutionEdgeMode:
'callable-flow-only' — a real emit-pipeline branch that suppresses all
ordinary emission for standalone providers (review finding 22, #2522) —
and predated the skipped-key names/stats surfacing.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* docs(scope-resolution): correct value-ref resolution attribution and stale pdg-gating comments

The value-ref contract comment claimed MethodRegistry resolution — the
mechanism is the post-finalize findCallableBindingInScope walker owned by
emitPropertyDispatchCalls (resolveReferenceSites skips these sites). Three
'only under --pdg' calleeIdSink comments were falsified by the #2437 gating
change (callee-id-sink.ts's header was updated; these copies were missed).
Review finding 23, #2522.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* test(ingestion): direct unit coverage for synthesizeCallableFlowCaptures

The 1,100-line shared synthesizer had no test naming it — only downstream
consumers were covered (review finding 24, #2522). Pins seed/invoke/
formal/argument emission, subscript container binding, store-gated member
invokes, produced-value guards, and the bareNamesAreCalls knob over a
minimal options object so assertions target the synthesizer's own
semantics.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* test(resolvers): deepen shallow-language coverage; fix Kotlin/Swift reassignment gaps it exposed

Adds the COBOL SET x TO y copy-branch scenario and conditional-assignment
scenarios for Kotlin, C#, Swift, and Dart (10 languages previously had one
generic case each — review finding 25, #2522). The new scenarios exposed
two real capture gaps, fixed here:
- tree-sitter-kotlin's 'assignment' node is fieldless, so nested
  reassignments (chosen = ::target inside a block) produced no flow facts;
  Kotlin's extractAssignment now decomposes it positionally.
- tree-sitter-swift fields its assignment as target:/result:, neither in
  the shared fallback's field lists; both added.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* test(infra): literal-validation gate for callable-capture option Sets

The #1920 gate validates query literals and exported configs but not the
module-private *_CALLABLE_CAPTURE_OPTIONS Sets consumed by the shared
synthesizer — a typo'd node type silently captures nothing (PHP shipped a
dead 'optional_parameter'; review finding 26, #2522). Every <key>NodeTypes
Set literal is now validated against its language's grammar; name-carrying
sets (callableProtocolMethods, memberPointerOperators) are deliberately
outside the contract.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* test(storage): centralize corrupt-fixture casts into makeStoreEntry

The callable-flow store tests scattered 'as unknown as' double-casts per
fixture (review finding 27, #2522; standing no-as-any rule). One typed
helper now owns the single controlled escape hatch for building malformed
serialization-boundary payloads.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* chore(bench): refresh capture fingerprints after review fixes

python-scope: the committed baseline (8d5c3699) never matched this
branch's code — CI's benchmarks arm was red on the PR head (review
finding 2/HIGH, #2522); regenerated (a99e69ab), scaling 1.04 in budget.
scope-capture: ruby/cpp/swift/java/kotlin drifted from the review-fix
commits (bare-name suppression, passing modes + ->* recovery, assignment
fields, protocol narrowing, positional assignment); all 14 languages
re-verified PASS with ratios <= 1.18 against the 1.5 budget.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* chore(docs): untrack docs/plans working documents

docs/ is gitignored (local working docs); the plan files were force-added
past the ignore. Untracked from the index only — they stay on disk.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* test(golden): regenerate captures goldens after callable-flow review fixes

The per-language digest guards (csharp/go/php/python/ruby/rust/swift)
locked the pre-fix capture output; the review-fix series intentionally
changed it — store-gated member invokes, subscript container binding,
Ruby bare-name suppression, Swift assignment fields, positional pairing.
Regenerated with UPDATE_GOLDEN=1; clean verification run 59/59; all other
parity/golden guards (pipeline-graph, spring-route, python parity) pass
untouched at 33/33.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* fix(ingestion): prototypes are callees, not callable value cells

The cross-function visibility fix indexed EVERY signature-bearing
declaration as a value binding — including plain function/method
prototypes (void f(int);). Every call to a declared function then became
an indirect invoke, and with emitCanonicalInvokeReference (C/C++) minted a
free-call reference that resolved through the registry, bypassing the
precise passes' two-phase/ambiguity/subobject suppression — eight phantom
CALLS edges in the cpp resolver suite on CI.

Only declarations whose binding identifier sits under a pointer/
parenthesized declarator (callable-typed variables like void (*fp)(int);)
create value cells now. cpp resolver suite 331/331; callable-value-flow +
C/C++ suites 181/181 (the cross-function fp regression still passes); cpp
fingerprint rebaselined, both bench gates PASS.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

---------

Co-authored-by: Claude Fable 5 <noreply@anthropic.com>
2026-07-17 17:20:02 +01:00
dependabot[bot]
3c36ab906b
chore(deps)(deps): bump @langchain/anthropic in /gitnexus-web (#2526)
Bumps [@langchain/anthropic](https://github.com/langchain-ai/langchainjs) from 1.3.29 to 1.5.1.
- [Release notes](https://github.com/langchain-ai/langchainjs/releases)
- [Commits](https://github.com/langchain-ai/langchainjs/commits/@langchain/anthropic@1.5.1)

---
updated-dependencies:
- dependency-name: "@langchain/anthropic"
  dependency-version: 1.5.1
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: Gergő Magyar <gergomagyar@icloud.com>
2026-07-17 13:55:12 +01:00
dependabot[bot]
4d85fe1f19
chore(deps)(deps-dev): bump @types/node in /gitnexus-web (#2528)
Bumps [@types/node](https://github.com/DefinitelyTyped/DefinitelyTyped/tree/HEAD/types/node) from 25.9.1 to 25.9.5.
- [Release notes](https://github.com/DefinitelyTyped/DefinitelyTyped/releases)
- [Commits](https://github.com/DefinitelyTyped/DefinitelyTyped/commits/HEAD/types/node)

---
updated-dependencies:
- dependency-name: "@types/node"
  dependency-version: 25.9.5
  dependency-type: direct:development
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: Gergő Magyar <gergomagyar@icloud.com>
2026-07-17 13:54:44 +01:00
dependabot[bot]
06ba512046
chore(deps)(deps-dev): bump @babel/parser in /gitnexus (#2531)
Bumps [@babel/parser](https://github.com/babel/babel/tree/HEAD/packages/babel-parser) from 8.0.0 to 8.0.4.
- [Release notes](https://github.com/babel/babel/releases)
- [Changelog](https://github.com/babel/babel/blob/main/CHANGELOG.md)
- [Commits](https://github.com/babel/babel/commits/v8.0.4/packages/babel-parser)

---
updated-dependencies:
- dependency-name: "@babel/parser"
  dependency-version: 8.0.4
  dependency-type: direct:development
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2026-07-17 13:24:15 +01:00
dependabot[bot]
22905bb2a7
chore(deps)(deps-dev): bump @babel/traverse in /gitnexus (#2532)
Bumps [@babel/traverse](https://github.com/babel/babel/tree/HEAD/packages/babel-traverse) from 8.0.0 to 8.0.4.
- [Release notes](https://github.com/babel/babel/releases)
- [Changelog](https://github.com/babel/babel/blob/main/CHANGELOG.md)
- [Commits](https://github.com/babel/babel/commits/v8.0.4/packages/babel-traverse)

---
updated-dependencies:
- dependency-name: "@babel/traverse"
  dependency-version: 8.0.4
  dependency-type: direct:development
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2026-07-17 13:24:01 +01:00
dependabot[bot]
0b777979d8
chore(deps)(deps-dev): bump @babel/types in /gitnexus (#2534)
Bumps [@babel/types](https://github.com/babel/babel/tree/HEAD/packages/babel-types) from 8.0.0 to 8.0.4.
- [Release notes](https://github.com/babel/babel/releases)
- [Changelog](https://github.com/babel/babel/blob/main/CHANGELOG.md)
- [Commits](https://github.com/babel/babel/commits/v8.0.4/packages/babel-types)

---
updated-dependencies:
- dependency-name: "@babel/types"
  dependency-version: 8.0.4
  dependency-type: direct:development
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2026-07-17 13:23:47 +01:00
dependabot[bot]
11c9d791e4
chore(deps): bump github/codeql-action/init from 4.36.2 to 4.37.0 (#2504)
Bumps [github/codeql-action/init](https://github.com/github/codeql-action) from 4.36.2 to 4.37.0.
- [Release notes](https://github.com/github/codeql-action/releases)
- [Changelog](https://github.com/github/codeql-action/blob/main/CHANGELOG.md)
- [Commits](8aad20d150...99df26d4f1)

---
updated-dependencies:
- dependency-name: github/codeql-action/init
  dependency-version: 4.37.0
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: Gergő Magyar <gergomagyar@icloud.com>
2026-07-17 13:23:26 +01:00
dependabot[bot]
64e9ef8484
chore(deps)(deps): bump @langchain/ollama in /gitnexus-web (#2527)
Bumps [@langchain/ollama](https://github.com/langchain-ai/langchainjs) from 1.2.7 to 1.3.0.
- [Release notes](https://github.com/langchain-ai/langchainjs/releases)
- [Commits](https://github.com/langchain-ai/langchainjs/compare/langchain@1.2.7...@langchain/ollama@1.3.0)

---
updated-dependencies:
- dependency-name: "@langchain/ollama"
  dependency-version: 1.3.0
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2026-07-17 13:22:37 +01:00
dependabot[bot]
90b5098b24
chore(deps)(deps): bump @langchain/core in /gitnexus-web (#2530)
Bumps [@langchain/core](https://github.com/langchain-ai/langchainjs) from 1.2.1 to 1.2.2.
- [Release notes](https://github.com/langchain-ai/langchainjs/releases)
- [Commits](https://github.com/langchain-ai/langchainjs/compare/@langchain/core@1.2.1...@langchain/core@1.2.2)

---
updated-dependencies:
- dependency-name: "@langchain/core"
  dependency-version: 1.2.2
  dependency-type: direct:production
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2026-07-17 13:22:18 +01:00
dependabot[bot]
42c4d91cd4
chore(deps)(deps-dev): bump vitest from 4.1.9 to 4.1.10 in /gitnexus-web (#2533)
Bumps [vitest](https://github.com/vitest-dev/vitest/tree/HEAD/packages/vitest) from 4.1.9 to 4.1.10.
- [Release notes](https://github.com/vitest-dev/vitest/releases)
- [Changelog](https://github.com/vitest-dev/vitest/blob/main/docs/releases.md)
- [Commits](https://github.com/vitest-dev/vitest/commits/v4.1.10/packages/vitest)

---
updated-dependencies:
- dependency-name: vitest
  dependency-version: 4.1.10
  dependency-type: direct:development
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2026-07-17 13:21:52 +01:00
dependabot[bot]
e2e9254938
chore(deps): bump github/codeql-action/upload-sarif (#2535)
Bumps the codeql-action group with 1 update: [github/codeql-action/upload-sarif](https://github.com/github/codeql-action).


Updates `github/codeql-action/upload-sarif` from 4.36.2 to 4.37.0
- [Release notes](https://github.com/github/codeql-action/releases)
- [Changelog](https://github.com/github/codeql-action/blob/main/CHANGELOG.md)
- [Commits](8aad20d150...99df26d4f1)

---
updated-dependencies:
- dependency-name: github/codeql-action/upload-sarif
  dependency-version: 4.37.0
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: codeql-action
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2026-07-17 13:21:25 +01:00
dependabot[bot]
0656099332
chore(deps): bump docker/metadata-action from 6.1.0 to 6.2.0 (#2536)
Bumps [docker/metadata-action](https://github.com/docker/metadata-action) from 6.1.0 to 6.2.0.
- [Release notes](https://github.com/docker/metadata-action/releases)
- [Commits](80c7e94dd9...dc80280410)

---
updated-dependencies:
- dependency-name: docker/metadata-action
  dependency-version: 6.2.0
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2026-07-17 13:21:05 +01:00
dependabot[bot]
731ab6f512
chore(deps): bump marocchino/sticky-pull-request-comment (#2537)
Bumps [marocchino/sticky-pull-request-comment](https://github.com/marocchino/sticky-pull-request-comment) from 3.0.4 to 3.0.5.
- [Release notes](https://github.com/marocchino/sticky-pull-request-comment/releases)
- [Commits](0ea0beb66e...5770ad5eb8)

---
updated-dependencies:
- dependency-name: marocchino/sticky-pull-request-comment
  dependency-version: 3.0.5
  dependency-type: direct:production
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2026-07-17 13:20:48 +01:00
dependabot[bot]
dc993a6d43
chore(deps): bump github/codeql-action/analyze from 4.36.2 to 4.37.0 (#2506)
* chore(deps): bump github/codeql-action/analyze from 4.36.2 to 4.37.0

Bumps [github/codeql-action/analyze](https://github.com/github/codeql-action) from 4.36.2 to 4.37.0.
- [Release notes](https://github.com/github/codeql-action/releases)
- [Changelog](https://github.com/github/codeql-action/blob/main/CHANGELOG.md)
- [Commits](8aad20d150...99df26d4f1)

---
updated-dependencies:
- dependency-name: github/codeql-action/analyze
  dependency-version: 4.37.0
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>

* ci(codeql): keep action steps in lockstep

Co-authored-by: azizur100389 <azizur100389@gmail.com>

---------

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: azizur100389 <azizur100389@gmail.com>
2026-07-17 11:40:51 +01:00
dependabot[bot]
527ea5fc7a
chore(deps)(deps-dev): bump @babel/types in /gitnexus (#2518) 2026-07-17 05:26:54 +01:00
dependabot[bot]
e8fdc2e2ab
chore(deps)(deps-dev): bump @babel/generator in /gitnexus (#2519) 2026-07-17 04:42:39 +01:00
dependabot[bot]
91955e6576
chore(deps)(deps-dev): bump @babel/traverse in /gitnexus (#2520)
Some checks are pending
CodeQL / Analyze (javascript-typescript) (push) Waiting to run
CodeQL / Analyze (python) (push) Waiting to run
Gitleaks / gitleaks (push) Waiting to run
Publish / Classify release event (push) Waiting to run
Publish / RC guard (marker + release-PR skip) (push) Blocked by required conditions
Publish / ci (push) Blocked by required conditions
Publish / Publish to npm (push) Blocked by required conditions
Publish / Build & Push RC Docker images (push) Blocked by required conditions
Scorecard / Scorecard analysis (push) Waiting to run
Trivy Image Scan / Trivy (gitnexus-cli) (push) Waiting to run
Trivy Image Scan / Trivy (gitnexus-web) (push) Waiting to run
Bumps [@babel/traverse](https://github.com/babel/babel/tree/HEAD/packages/babel-traverse) from 7.29.7 to 8.0.0.
- [Release notes](https://github.com/babel/babel/releases)
- [Changelog](https://github.com/babel/babel/blob/main/CHANGELOG.md)
- [Commits](https://github.com/babel/babel/commits/v8.0.0/packages/babel-traverse)

---
updated-dependencies:
- dependency-name: "@babel/traverse"
  dependency-version: 8.0.0
  dependency-type: direct:development
  update-type: version-update:semver-major
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2026-07-16 22:51:51 +01:00
dependabot[bot]
795f81127b
chore(deps)(deps-dev): bump tsx from 4.23.0 to 4.23.1 in /gitnexus (#2517)
Bumps [tsx](https://github.com/privatenumber/tsx) from 4.23.0 to 4.23.1.
- [Release notes](https://github.com/privatenumber/tsx/releases)
- [Changelog](https://github.com/privatenumber/tsx/blob/master/release.config.cjs)
- [Commits](https://github.com/privatenumber/tsx/compare/v4.23.0...v4.23.1)

---
updated-dependencies:
- dependency-name: tsx
  dependency-version: 4.23.1
  dependency-type: direct:development
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2026-07-16 21:54:48 +01:00
dependabot[bot]
d27b1ab8c4
chore(deps)(deps-dev): bump @babel/parser in /gitnexus (#2521)
Bumps [@babel/parser](https://github.com/babel/babel/tree/HEAD/packages/babel-parser) from 7.29.7 to 8.0.0.
- [Release notes](https://github.com/babel/babel/releases)
- [Changelog](https://github.com/babel/babel/blob/main/CHANGELOG.md)
- [Commits](https://github.com/babel/babel/commits/v8.0.0/packages/babel-parser)

---
updated-dependencies:
- dependency-name: "@babel/parser"
  dependency-version: 8.0.0
  dependency-type: direct:development
  update-type: version-update:semver-major
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2026-07-16 21:51:25 +01:00
Parafee41
8292b2bee4
test(cli): lock native load guard for lazy actions (#2442) 2026-07-16 15:22:20 +01:00
Parafee41
f45e89e6b6
fix(embeddings): make batch inserts retry-safe (#2453)
* fix(embeddings): make batch inserts retry-safe

* fix(types): cover optional transformers dependency

* Fix embedding restore test expectation

* test(embeddings): count checkpoint creates

---------

Co-authored-by: Gergő Magyar <gergomagyar@icloud.com>
2026-07-16 15:21:03 +01:00
Parafee41
b85f1ace7a
fix(mcp): avoid api impact schema combinators (#2489)
Co-authored-by: Gergő Magyar <gergomagyar@icloud.com>
2026-07-16 15:20:22 +01:00
azizur100389
a333d94a00
feat(wiki): allow explicit HTTP LLM hosts (#2491)
* feat(wiki): allow explicit HTTP LLM hosts

Keep wiki LLM HTTP endpoints fail-closed by default while adding a narrow exact-host opt-in for LAN/self-hosted models.

Co-authored-by: Cursor <cursoragent@cursor.com>

* fix(wiki): simplify insecure LLM flag name

Rename the wiki HTTP opt-in flag to --allow-insecure-connection per review feedback.

Co-authored-by: Cursor <cursoragent@cursor.com>

* fix(wiki): simplify insecure connection env

Rename the wiki HTTP allowlist environment variable and align validation errors with the CLI flag naming.

Co-authored-by: Cursor <cursoragent@cursor.com>

---------

Co-authored-by: Cursor <cursoragent@cursor.com>
Co-authored-by: Gergő Magyar <gergomagyar@icloud.com>
2026-07-16 13:53:58 +01:00
azizur100389
3dd553b345
feat(taint): expand TS/JS sink model (#2490)
* feat(taint): expand TS/JS sink model

Co-authored-by: Cursor <cursoragent@cursor.com>

* test(taint): cover TS sink disambiguation end-to-end

Add a real-pipeline integration test proving the expanded TS/JS taint sinks only emit findings for intended imported and receiver-conventional symbols.

Co-authored-by: Cursor <cursoragent@cursor.com>

---------

Co-authored-by: Cursor <cursoragent@cursor.com>
Co-authored-by: Gergő Magyar <gergomagyar@icloud.com>
2026-07-16 13:11:57 +01:00
Gergo Magyar
573a777ef5 ci(tests): widen the Windows shard watchdog and keep exit diagnostics (#2449)
The busiest Windows platform shard reached 14m57s against the 15 minute
watchdog on the rc.19 green run and has timed out once since. CI now
sets GITNEXUS_CROSS_PLATFORM_TIMEOUT_MINUTES=20 (the job timeout stays
25), the stale comfortably-under comment reflects reality, and the
runner always logs status, signal, spawn code and elapsed time so the
next status-null death is diagnosable.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
2026-07-16 12:29:01 +01:00
Gergo Magyar
42de243e9a ci(release): sync plugin manifests on every version bump (#2445)
The RC path bumped only gitnexus/package.json, so every v1.6.10-rc tag
through rc.28 shipped the four plugin manifest surfaces frozen at 1.6.9
and failed its own unit suite. The npm version lifecycle script now
runs a fail-closed sync whenever npm version executes, in CI or on a
maintainer's laptop; publish.yml verifies the result and stages the
surfaces into the detached release commit, and the stable path refuses
to publish a tag whose manifests drifted. The sync is textual so a
release commit carries a one-line change per surface instead of
reformatting churn.

Design follows the proposal by @100yenadmin in #2445, moved onto the
standard npm version hook.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
2026-07-16 12:29:01 +01:00
Gergő Magyar
3ee1e2cb60
Merge pull request #2513 from electricsheephq/upstream/file-embedding-delete-regression
test(embeddings): cover File-row deletion
2026-07-16 12:07:18 +01:00
Eva
5e3531133d test(embeddings): cover File-row deletion 2026-07-16 17:51:46 +07:00
Gergő Magyar
c4fb511a0a
Merge pull request #2512 from abhigyanpatwari/merge/eva-fixes-2
fix: land cache, CLI, and embeddings series (#2476 #2470 #2455 #2468)
2026-07-16 11:43:02 +01:00
Gergo Magyar
36d25b5a70 test(cli): pin the non-zero exit for not-found context payloads
The skip-git ignore test asserted the error payload while relying on
exit 0; since the output() guard an error payload also exits 1, so the
test now captures the payload from the exec failure and pins both.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
2026-07-16 10:11:32 +00:00
Gergo Magyar
5869dde31d fix(embeddings): make HTTP generation resumable (#2468) 2026-07-16 10:00:50 +00:00
Gergo Magyar
e814c5a10d fix(embeddings): include File rows in the incremental delete sweeps
The zero-symbol File fallback from #2455 writes File embedding rows,
but the filePath-scoped delete sweeps joined through EMBEDDABLE_LABELS
only. Docs repos accumulated duplicate rows on re-analyze and deleted
files left orphans. Free for code repos: no File rows exist to match.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
2026-07-16 10:00:26 +00:00
Gergo Magyar
de5321ed24 fix(embeddings): fall back to text-bearing file nodes (#2455) 2026-07-16 09:58:38 +00:00
Gergo Magyar
e20e326290 fix(cli): fail every tool command loudly on backend error payloads
Moves the #2469 guard from cypherCommand into output() so all seven
tool commands that print backend results share the exit semantics.
Adds query and context regression cases.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
2026-07-16 09:58:14 +00:00
Gergo Magyar
639aab6af0 fix(cli): fail cypher errors loudly (#2470) 2026-07-16 09:56:09 +00:00
Gergo Magyar
ee7161ef0d fix(cache): degrade when the durable generation reset fails
An fs failure while resetting a chunk generation now warns and
continues like the neighboring durable-store paths instead of failing
the analyze. Workers recreate the directory on write.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
2026-07-16 09:55:44 +00:00
Gergo Magyar
dc15de9dec fix(cache): bound parsedfile generations (#2476) 2026-07-16 09:51:46 +00:00
dependabot[bot]
318754e781
chore(deps)(deps): bump axios from 1.16.1 to 1.18.1 in /gitnexus-web (#2499)
Bumps [axios](https://github.com/axios/axios) from 1.16.1 to 1.18.1.
- [Release notes](https://github.com/axios/axios/releases)
- [Changelog](https://github.com/axios/axios/blob/v1.x/CHANGELOG.md)
- [Commits](https://github.com/axios/axios/compare/v1.16.1...v1.18.1)

---
updated-dependencies:
- dependency-name: axios
  dependency-version: 1.18.1
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2026-07-16 10:30:53 +01:00
dependabot[bot]
43a6f6828f
chore(deps)(deps-dev): bump @vercel/node in /gitnexus-web (#2502)
Bumps [@vercel/node](https://github.com/vercel/vercel/tree/HEAD/packages/node) from 5.8.22 to 5.8.23.
- [Release notes](https://github.com/vercel/vercel/releases)
- [Changelog](https://github.com/vercel/vercel/blob/main/packages/node/CHANGELOG.md)
- [Commits](https://github.com/vercel/vercel/commits/@vercel/node@5.8.23/packages/node)

---
updated-dependencies:
- dependency-name: "@vercel/node"
  dependency-version: 5.8.23
  dependency-type: direct:development
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2026-07-16 10:30:21 +01:00
Gergő Magyar
2e2db8b7c9
Merge pull request #2511 from abhigyanpatwari/merge/eva-series-2026-07
feat: land determinism and MCP policy series (#2458 #2482 #2464 #2465 #2478 #2480 #2462 #2460)
2026-07-16 10:26:43 +01:00
Gergo Magyar
c836801c4a feat(mcp): add deterministic response budgets (#2460)
Composed with the read-only and repository policies in the CallTool
handler: read-only assert, then budget resolution, then scoped dispatch
with the transport arg stripped.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
2026-07-16 08:59:05 +00:00
Gergo Magyar
f49ca472fa feat(mcp): normalize impact and context parameter aliases (#2462) 2026-07-16 08:55:49 +00:00
Gergo Magyar
490e74a901 fix(scope): stabilize graph lookup collisions (#2480) 2026-07-16 08:55:23 +00:00
Gergo Magyar
b685ba4cc8 test(communities): rebaseline pipeline-pdg goldens for projection order
The C#, Java and Go flag-off digests shift with the canonical community
projection from #2478 stacked on the walker sort from #2482. Regenerated
via vitest -u; mini-repo pipeline golden was already correct.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
2026-07-16 08:55:09 +00:00
Gergo Magyar
193db519a5 fix(communities): canonicalize projection order (#2478) 2026-07-16 08:50:51 +00:00
Gergo Magyar
48a145a47f feat(mcp): enforce repository allowlist and default (#2465)
Merged with the read-only policy: both filters compose in server.ts.
Review hardening: assertResourceUri compares the opaque host case
insensitively (GITNEXUS://GROUP bypass) and gains the fail-closed
fallback for unparseable URIs; the backend proxy now also intercepts
queryClusters/queryProcesses/queryClusterDetail/queryProcessDetail;
scrubGroupDescription is shared from read-only-policy.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
2026-07-16 08:50:07 +00:00
Gergo Magyar
aa0d6ee0a3 fix(mcp): reject group-only args at read-only dispatch
crossDepth and subgroup are inert outside @group routing, but rejecting
them keeps the scrubbed schema and the dispatch contract in agreement.
Also documents that resource content scrubbing is cosmetic.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
2026-07-16 08:43:30 +00:00
Gergo Magyar
a7775de993 feat(mcp): add fail-closed read-only mode (#2464) 2026-07-16 08:42:32 +00:00
Gergo Magyar
6b013e7d30 fix(scan): lock in Rust publish order and guard PHP suffix roots
Adds the missing #2481 Rust regression test (importer before definer),
fails closed when a PHP namespace suffix matches directories under
different roots, and points the baselines note at #2481/#2482.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
2026-07-16 08:42:07 +00:00