From b73fe145d15627fa1ce59e760398e5715ff4ff99 Mon Sep 17 00:00:00 2001
From: Julian Onions <julian.onions@gmail.com>
Date: Thu, 15 Nov 2007 17:15:56 +0000
Subject: [PATCH] Bioinformatics journal format

---
 csl/bioinformatics.csl | 138 +++++++++++++++++++++++++++++++++++++++++
 1 file changed, 138 insertions(+)
 create mode 100644 csl/bioinformatics.csl

diff --git a/csl/bioinformatics.csl b/csl/bioinformatics.csl
new file mode 100644
index 0000000000..0944556798
--- /dev/null
+++ b/csl/bioinformatics.csl
@@ -0,0 +1,138 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<style xmlns="http://purl.org/net/xbiblio/csl" xml:lang="en" class="in-text" >
+  <info>
+    <title>Bioinformatics Journal</title>
+    <id>http://www.zotero.org/styles/bioinformatics</id>
+    <link>http://www.zotero.org/styles/bioinformatics</link>
+    <author>
+      <name>Julian Onions</name>
+      <email>julian.onions@gmail.com</email>
+    </author>
+    <category term="author-date"/>
+    <category term="biology"/>
+    <updated></updated>
+    <summary>The Bioinformatics Journal style.</summary>
+    <source>http://www.oxfordjournals.org/bioinformatics/for_authors/general.html</source>
+  </info>
+  <macro name="editor">
+    <names variable="editor" delimiter=",">
+      <name name-as-sort-order="all" sort-separator="," and="text" initialize-with="." delimiter=", "/>
+      <label form="short" prefix=" (" text-transform="lowercase" suffix=")"/>
+    </names>
+  </macro>
+  <macro name="author">
+    <names variable="author">
+      <name name-as-sort-order="all" and="text" sort-separator="," initialize-with="."
+	    delimiter=", "/>
+      <label form="short" prefix=" " suffix="." text-transform="lowercase"/>
+      <substitute>
+	<names variable="editor"/>
+	<text variable="title"/>
+      </substitute>
+    </names>
+  </macro>
+  <macro name="author-short">
+    <names variable="author">
+      <name form="short" and="text" delimiter=", " initialize-with=". "/>
+      <substitute>
+	<names variable="editor"/>
+	<names variable="translator"/>
+	<text variable="title"/>
+      </substitute>
+    </names>
+  </macro>
+  <macro name="access">
+    <group>
+      <text value="Available at:" suffix=" "/>
+      <text variable="URL"/>
+      <group prefix=" [" suffix="]">
+	<text term="accessed" text-transform="capitalize" suffix=" "/>
+	<date variable="accessed">
+	  <date-part name="month" suffix=" "/>
+	  <date-part name="day" suffix=", "/>
+	  <date-part name="year"/>
+	</date>
+      </group>
+    </group>
+  </macro>
+  <macro name="title">
+    <text variable="title"/>
+  </macro>
+  <macro name="publisher">
+    <group delimiter=", ">
+      <text variable="publisher"/>
+      <text variable="publisher-place"/>
+    </group>
+  </macro>
+  <macro name="year-date">
+    <date variable="issued">
+      <date-part name="year"/>
+    </date>
+  </macro>
+  <citation>
+    <option name="et-al-min" value="3"/>
+    <option name="et-al-use-first" value="1"/>
+    <option name="disambiguate-add-year-suffix" value="true"/>
+    <option name="disambiguate-add-names" value="true"/>
+    <option name="disambiguate-add-givenname" value="true"/>
+    <option name="collapse" value="year"/>
+    <layout prefix="(" suffix=")" delimiter="; ">
+      <group delimiter=", ">
+	<group delimiter=" ">
+	  <text macro="author-short"/>
+	  <text macro="year-date"/>
+	</group>
+	<text variable="locator"/>
+      </group>
+    </layout>
+  </citation>
+  <bibliography>
+    <option name="hanging-indent" value="true"/>
+    <option name="et-al-min" value="3"/>
+    <option name="et-al-use-first" value="1"/>
+    <sort>
+      <key macro="author"/>
+      <key variable="title"/>
+    </sort>
+    <layout suffix=".">
+      <text macro="author"/>
+      <date variable="issued" prefix=" (" suffix=")">
+	<date-part name="year"/>
+      </date>
+      <choose>
+	<if type="book">
+	  <group delimiter=" " prefix=" ">
+	    <text macro="title"/>
+	    <text variable="edition" suffix=" ed."/>
+	    <text macro="editor" />
+	    <text macro="publisher" />
+	  </group>
+	</if>
+	<else-if type="chapter">
+	  <text macro="title" prefix=" " suffix="."/>
+	  <group class="container" prefix=" " delimiter=", " suffix=".">
+	    <text term="in" text-transform="capitalize"/>
+	    <text macro="editor"/>
+	    <text variable="container-title" font-style="italic"/>
+	    <text variable="collection-title" prefix=" " suffix="."/>
+	  </group>
+	  <group suffix=".">
+	    <text macro="publisher" prefix=" "/>
+	    <group prefix=", ">
+	      <label variable="page" suffix=". " form="short"/>
+	      <text variable="page"/>
+	    </group>
+	  </group>
+	</else-if>
+	<else>
+	  <text macro="title" prefix=" " suffix="."/>
+	  <group class="container" delimiter=", " prefix=" " suffix=".">
+	    <text variable="container-title" form="short" font-style="italic"/>
+	    <text variable="volume" />
+	    <text variable="page"/>
+	  </group>
+	</else>
+      </choose>
+    </layout>
+  </bibliography>
+</style>