mirror of
https://github.com/featurebasedb/featurebase.git
synced 2026-09-06 00:25:55 +00:00
This commit implements BSI with variable bit depth using a sign magnitudeto indicate whether a value is positive or negative. This also rearranges the existence bit to be the first bit instead of the last bit.
489 lines
11 KiB
Go
489 lines
11 KiB
Go
// Copyright 2017 Pilosa Corp.
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//
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// Licensed under the Apache License, Version 2.0 (the "License");
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// you may not use this file except in compliance with the License.
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// You may obtain a copy of the License at
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//
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// http://www.apache.org/licenses/LICENSE-2.0
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//
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// Unless required by applicable law or agreed to in writing, software
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// distributed under the License is distributed on an "AS IS" BASIS,
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// WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
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// See the License for the specific language governing permissions and
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// limitations under the License.
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package pilosa
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import (
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"encoding/json"
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"sort"
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"github.com/pilosa/pilosa/roaring"
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"github.com/pkg/errors"
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)
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// Row is a set of integers (the associated columns), and attributes which are
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// arbitrary key/value pairs storing metadata about what the row represents.
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type Row struct {
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segments []rowSegment
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// String keys translated to/from segment columns.
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Keys []string
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// Attributes associated with the row.
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Attrs map[string]interface{}
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}
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// NewRow returns a new instance of Row.
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func NewRow(columns ...uint64) *Row {
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r := &Row{}
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for _, i := range columns {
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r.SetBit(i)
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}
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return r
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}
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// IsEmpty returns true if the row doesn't contain any set bits.
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func (r *Row) IsEmpty() bool {
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if len(r.segments) == 0 {
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return true
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}
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for i := range r.segments {
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if r.segments[i].n > 0 {
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return false
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}
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}
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return true
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}
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// Merge merges data from other into r.
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func (r *Row) Merge(other *Row) {
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var segments []rowSegment
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itr := newMergeSegmentIterator(r.segments, other.segments)
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for s0, s1 := itr.next(); s0 != nil || s1 != nil; s0, s1 = itr.next() {
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// Use the other row's data if segment is missing.
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if s0 == nil {
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segments = append(segments, *s1)
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continue
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} else if s1 == nil {
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segments = append(segments, *s0)
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continue
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}
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// Otherwise merge.
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s0.Merge(s1)
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segments = append(segments, *s0)
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}
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r.segments = segments
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r.invalidateCount()
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}
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// intersectionCount returns the number of intersections between r and other.
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func (r *Row) intersectionCount(other *Row) uint64 {
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var n uint64
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itr := newMergeSegmentIterator(r.segments, other.segments)
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for s0, s1 := itr.next(); s0 != nil || s1 != nil; s0, s1 = itr.next() {
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// Ignore non-overlapping segments.
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if s0 == nil || s1 == nil {
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continue
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}
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n += s0.IntersectionCount(s1)
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}
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return n
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}
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// Intersect returns the itersection of r and other.
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func (r *Row) Intersect(other *Row) *Row {
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var segments []rowSegment
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itr := newMergeSegmentIterator(r.segments, other.segments)
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for s0, s1 := itr.next(); s0 != nil || s1 != nil; s0, s1 = itr.next() {
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// Ignore non-overlapping segments.
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if s0 == nil || s1 == nil {
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continue
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}
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segments = append(segments, *s0.Intersect(s1))
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}
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return &Row{segments: segments}
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}
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// Any returns true if row contains any bits.
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func (r *Row) Any() bool {
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for _, s := range r.segments {
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if s.data.Any() {
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return true
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}
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}
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return false
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}
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// Xor returns the xor of r and other.
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func (r *Row) Xor(other *Row) *Row {
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var segments []rowSegment
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itr := newMergeSegmentIterator(r.segments, other.segments)
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for s0, s1 := itr.next(); s0 != nil || s1 != nil; s0, s1 = itr.next() {
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if s1 == nil {
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segments = append(segments, *s0)
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continue
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} else if s0 == nil {
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segments = append(segments, *s1)
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continue
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}
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segments = append(segments, *s0.Xor(s1))
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}
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return &Row{segments: segments}
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}
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// Union returns the bitwise union of r and other.
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func (r *Row) Union(other *Row) *Row {
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var segments []rowSegment
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itr := newMergeSegmentIterator(r.segments, other.segments)
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for s0, s1 := itr.next(); s0 != nil || s1 != nil; s0, s1 = itr.next() {
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if s1 == nil {
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segments = append(segments, *s0)
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continue
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} else if s0 == nil {
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segments = append(segments, *s1)
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continue
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}
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segments = append(segments, *s0.Union(s1))
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}
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return &Row{segments: segments}
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}
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// Difference returns the diff of r and other.
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func (r *Row) Difference(other *Row) *Row {
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var segments []rowSegment
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itr := newMergeSegmentIterator(r.segments, other.segments)
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for s0, s1 := itr.next(); s0 != nil || s1 != nil; s0, s1 = itr.next() {
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if s0 == nil {
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continue
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} else if s1 == nil {
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segments = append(segments, *s0)
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continue
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}
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segments = append(segments, *s0.Difference(s1))
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}
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return &Row{segments: segments}
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}
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// Shift returns the bitwise shift of r by n bits.
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// Currently only positive shift values are supported.
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func (r *Row) Shift(n int64) (*Row, error) {
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if n < 0 {
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return nil, errors.New("cannot shift by negative values")
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} else if n == 0 {
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return r, nil
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}
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work := r
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var segments []rowSegment
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for i := int64(0); i < n; i++ {
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segments = segments[:0]
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for _, segment := range work.segments {
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shifted, err := segment.Shift()
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if err != nil {
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return nil, errors.Wrap(err, "shifting row segment")
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}
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segments = append(segments, *shifted)
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}
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work = &Row{segments: segments}
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}
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return work, nil
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}
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// SetBit sets the i-th column of the row.
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func (r *Row) SetBit(i uint64) (changed bool) {
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return r.createSegmentIfNotExists(i / ShardWidth).SetBit(i)
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}
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// clearBit clears the i-th column of the row.
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func (r *Row) clearBit(i uint64) (changed bool) { // nolint: unparam
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s := r.segment(i / ShardWidth)
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if s == nil {
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return false
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}
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return s.ClearBit(i)
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}
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// Segments returns a list of all segments in the row.
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func (r *Row) Segments() []rowSegment {
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return r.segments
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}
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// segment returns a segment for a given shard.
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// Returns nil if segment does not exist.
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func (r *Row) segment(shard uint64) *rowSegment {
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if i := sort.Search(len(r.segments), func(i int) bool {
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return r.segments[i].shard >= shard
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}); i < len(r.segments) && r.segments[i].shard == shard {
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return &r.segments[i]
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}
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return nil
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}
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func (r *Row) createSegmentIfNotExists(shard uint64) *rowSegment {
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i := sort.Search(len(r.segments), func(i int) bool {
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return r.segments[i].shard >= shard
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})
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// Return exact match.
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if i < len(r.segments) && r.segments[i].shard == shard {
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return &r.segments[i]
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}
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// Insert new segment.
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r.segments = append(r.segments, rowSegment{data: *roaring.NewBitmap()})
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if i < len(r.segments) {
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copy(r.segments[i+1:], r.segments[i:])
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}
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r.segments[i] = rowSegment{
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data: *roaring.NewBitmap(),
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shard: shard,
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writable: true,
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}
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return &r.segments[i]
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}
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// invalidateCount updates the cached count in the row.
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func (r *Row) invalidateCount() {
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for i := range r.segments {
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r.segments[i].InvalidateCount()
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}
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}
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// Count returns the number of columns in the row.
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func (r *Row) Count() uint64 {
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var n uint64
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for i := range r.segments {
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n += r.segments[i].Count()
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}
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return n
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}
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// MarshalJSON returns a JSON-encoded byte slice of r.
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func (r *Row) MarshalJSON() ([]byte, error) {
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var o struct {
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Attrs map[string]interface{} `json:"attrs"`
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Columns []uint64 `json:"columns"`
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Keys []string `json:"keys,omitempty"`
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}
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o.Columns = r.Columns()
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o.Keys = r.Keys
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o.Attrs = r.Attrs
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if o.Attrs == nil {
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o.Attrs = make(map[string]interface{})
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}
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return json.Marshal(&o)
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}
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// Columns returns the columns in r as a slice of ints.
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func (r *Row) Columns() []uint64 {
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a := make([]uint64, 0, r.Count())
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for i := range r.segments {
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a = append(a, r.segments[i].Columns()...)
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}
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return a
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}
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// rowSegment holds a subset of a row.
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// This could point to a mmapped roaring bitmap or an in-memory bitmap. The
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// width of the segment will always match the shard width.
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type rowSegment struct {
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// Shard this segment belongs to
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shard uint64
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// Underlying raw bitmap implementation.
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// This is an mmapped bitmap if writable is false. Otherwise
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// it is a heap allocated bitmap which can be manipulated.
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data roaring.Bitmap
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writable bool
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// Bit count
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n uint64
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}
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// Merge adds chunks from other to s.
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// Chunks in s are overwritten if they exist in other.
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func (s *rowSegment) Merge(other *rowSegment) {
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s.ensureWritable()
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itr := other.data.Iterator()
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for v, eof := itr.Next(); !eof; v, eof = itr.Next() {
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s.SetBit(v)
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}
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}
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// IntersectionCount returns the number of intersections between s and other.
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func (s *rowSegment) IntersectionCount(other *rowSegment) uint64 {
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return s.data.IntersectionCount(&other.data)
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}
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// Intersect returns the itersection of s and other.
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func (s *rowSegment) Intersect(other *rowSegment) *rowSegment {
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data := s.data.Intersect(&other.data)
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return &rowSegment{
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data: *data,
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shard: s.shard,
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n: data.Count(),
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}
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}
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// Union returns the bitwise union of s and other.
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func (s *rowSegment) Union(other *rowSegment) *rowSegment {
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data := s.data.Union(&other.data)
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return &rowSegment{
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data: *data,
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shard: s.shard,
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n: data.Count(),
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}
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}
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// Difference returns the diff of s and other.
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func (s *rowSegment) Difference(other *rowSegment) *rowSegment {
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data := s.data.Difference(&other.data)
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return &rowSegment{
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data: *data,
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shard: s.shard,
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n: data.Count(),
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}
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}
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// Xor returns the xor of s and other.
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func (s *rowSegment) Xor(other *rowSegment) *rowSegment {
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data := s.data.Xor(&other.data)
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return &rowSegment{
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data: *data,
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shard: s.shard,
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n: data.Count(),
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}
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}
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// Shift returns s shifted by 1 bit.
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func (s *rowSegment) Shift() (*rowSegment, error) {
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//TODO deal with overflow
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data, err := s.data.Shift(1)
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if err != nil {
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return nil, errors.Wrap(err, "shifting roaring data")
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}
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return &rowSegment{
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data: *data,
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shard: s.shard,
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n: data.Count(),
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}, nil
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}
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// SetBit sets the i-th column of the row.
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func (s *rowSegment) SetBit(i uint64) (changed bool) {
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s.ensureWritable()
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changed, _ = s.data.Add(i)
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if changed {
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s.n++
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}
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return changed
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}
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// ClearBit clears the i-th column of the row.
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func (s *rowSegment) ClearBit(i uint64) (changed bool) {
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s.ensureWritable()
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changed, _ = s.data.Remove(i)
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if changed {
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s.n--
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}
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return changed
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}
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// InvalidateCount updates the cached count in the row.
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func (s *rowSegment) InvalidateCount() {
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s.n = s.data.Count()
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}
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// Columns returns a list of all columns set in the segment.
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func (s *rowSegment) Columns() []uint64 {
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a := make([]uint64, 0, s.Count())
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itr := s.data.Iterator()
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for v, eof := itr.Next(); !eof; v, eof = itr.Next() {
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a = append(a, v)
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}
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return a
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}
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// Count returns the number of set columns in the row.
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func (s *rowSegment) Count() uint64 { return s.n }
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// ensureWritable clones the segment if it is pointing to non-writable data.
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func (s *rowSegment) ensureWritable() {
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if s.writable {
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return
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}
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s.data = *s.data.Clone()
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s.writable = true
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}
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// mergeSegmentIterator produces an iterator that loops through two sets of segments.
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type mergeSegmentIterator struct {
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a0, a1 []rowSegment
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}
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// newMergeSegmentIterator returns a new instance of mergeSegmentIterator.
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func newMergeSegmentIterator(a0, a1 []rowSegment) mergeSegmentIterator {
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return mergeSegmentIterator{a0: a0, a1: a1}
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}
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// next returns the next set of segments.
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func (itr *mergeSegmentIterator) next() (s0, s1 *rowSegment) {
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// Find current segments.
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if len(itr.a0) > 0 {
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s0 = &itr.a0[0]
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}
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if len(itr.a1) > 0 {
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s1 = &itr.a1[0]
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}
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// Return if either or both are nil.
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if s0 == nil && s1 == nil {
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return
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} else if s0 == nil {
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itr.a1 = itr.a1[1:]
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return
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} else if s1 == nil {
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itr.a0 = itr.a0[1:]
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return
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}
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// Otherwise determine which is first.
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if s0.shard < s1.shard {
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itr.a0 = itr.a0[1:]
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return s0, nil
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} else if s0.shard > s1.shard {
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itr.a1 = itr.a1[1:]
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return s1, nil
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}
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// Return both if shards are equal.
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itr.a0, itr.a1 = itr.a0[1:], itr.a1[1:]
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return s0, s1
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}
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