featurebase/rbf
Seebs ad30a926f4 Giant Commit: drop a bunch of stuff we don't use.
These commits are hard to disentagle, and doing them separately means
re-modifying the same chunks of code several times before removing it,
and similar things.

Basically:
(1) Drop the bolt backend storage.
(2) Drop the blue-green wrapper that compares two backends.
(3) Drop unused or barely-used Tx API components from all the
remaining backends.
(4) Minor related cleanup to simplify things related to these.

The boltdb backend existed only to verify RBF. The blue-green wrapper
was mostly used to verify RBF, but in practice we had to do a lot
of working around that, and it introduced a lot of special cases.

Types removed:

IteratorFinder: Used only to implement the roaring iterator
on top of boltdb, and to complicate the way it worked in roaring.
Reverted the complications. Also unexport NewSliceContainers
which is used only for that outside of roaring's internals.

PortMapper from cluster_internal_test.go: Used only for a test
we removed early this year. Never used for anything else.

RawRoaringData: Totally unused.

TxStore: Totally unused.

Functions removed from Tx API, and sometimes corresponding
members were removed from structs:

* Dump: debugging code, I don't think I found any actually reachable
  paths to it.
* Group: only used for debugging TxGroup stuff
* IncrementOpN: only used by fragment, fragment can increment its
  own opN.
* Options: unused?
* Pointer: debugging only
* Readonly: used only to decide how to handle Tx in a TxGrp,
  but we never add a non-readonly Tx to a TxGrp. Removed also all
  the corresponding write-aware stuff.
* RoaringBitmapReader: Used exactly once, can just be a bm.WriteTo.
* Sn (and OpenSnList): Unused
* UnionInPlace: unused and conceptually-invalid; it didn't write
  to storage and shouldn't have, and was just "create a bitmap
  then call union-in-place", which we can do directly.
* UseRowCache: just checked storage.UseRowCache.

Other things removed:

The SetRequiredForAtomicWriteTx and ClearRequiredForAtomicWriteTx
functions go away, since nothing now seems to be using them? Same
for holder_internal_test's `testHasBit` and `testMustNotHaveBit`,
which were unused.

The DBPerShard "DeleteDBPath" and "HasData" functions and related
parts were mostly unused; took out the parts that were never
actually being reached.

Changed the API of one function to simplify special cases and
remove things:
* ImportRoaringBits had a special "data" argument which gave it
  subtly different semantics for RBF and roaring (for roaring, it
  could produce a roaring bitmap *with ops log*), didn't seem to
  be adding much. Removed corresponding "readStorageFromArchive"
  which is not otherwise used.

Also took out various debugging/dumping functions that were unused
and may have bitrotted.

Dropped a test from txfactory_internal_test, and the "pjobs"
code, because those two were the only things that needed Barrier
and thus idem, which lets us drop two more dependencies. We already
have errgroup for grouping things which want to terminate as
soon as one of them errors, approximately. To do better we'd have
to have context-threading, really.

Unbroke the WriteFragment test for non-roaring tests and made it
not roaring-only.
2021-10-26 12:30:25 -05:00
..
cfg introduce storage.Config 2021-01-20 22:05:38 -06:00
array.go FeatureBase Renaming: changing go.mod module name for featurebase 2021-07-19 09:20:30 -07:00
cursor.go FeatureBase Renaming: changing go.mod module name for featurebase 2021-07-19 09:20:30 -07:00
cursor_internal_test.go Giant Commit: drop a bunch of stuff we don't use. 2021-10-26 12:30:25 -05:00
cursor_test.go FeatureBase Renaming: changing go.mod module name for featurebase 2021-07-19 09:20:30 -07:00
cursorx.go Giant Commit: drop a bunch of stuff we don't use. 2021-10-26 12:30:25 -05:00
db.go Giant Commit: drop a bunch of stuff we don't use. 2021-10-26 12:30:25 -05:00
db_test.go FeatureBase Renaming: changing go.mod module name for featurebase 2021-07-19 09:20:30 -07:00
dot.go debugstats and rbf tooling for enhanced debugging/diagnostics 2020-12-08 22:47:40 +00:00
helpers_test.go missing license 2020-07-17 09:05:53 -05:00
ingest_test.go FeatureBase Renaming: changing go.mod module name for featurebase 2021-07-19 09:20:30 -07:00
page_map.go rbf: use an inlined immutable.Map<uint32, int64> for the PageMap 2020-11-20 00:49:41 +00:00
rbf.go FeatureBase Renaming: changing go.mod module name for featurebase 2021-07-19 09:20:30 -07:00
rbf_test.go FeatureBase Renaming: changing go.mod module name for featurebase 2021-07-19 09:20:30 -07:00
README.md fix a typo in the RBF spec 2021-03-10 14:25:38 -05:00
tx.go Giant Commit: drop a bunch of stuff we don't use. 2021-10-26 12:30:25 -05:00
tx_test.go Giant Commit: drop a bunch of stuff we don't use. 2021-10-26 12:30:25 -05:00
util.go Giant Commit: drop a bunch of stuff we don't use. 2021-10-26 12:30:25 -05:00
util_test.go FeatureBase Renaming: changing go.mod module name for featurebase 2021-07-19 09:20:30 -07:00

Roaring B-tree Format

The RBF format represents a Roaring bitmap whose containers are stored in the leafs of a b-tree. This allows the bitmap to be efficiently queried & updated.

File Format

The RBF file is divided into equal 8KB pages. Each page after the meta page is numbered incrementally from 1 to 2^31.

Pages can be one of the following types:

  • Meta page: contains header information.
  • Branch page: contains pointers to lower branch & leaf pages.
  • Leaf page: contains array and RLE container data.
  • Bitmap page: contains bitmap container data.

All integer values are little endian encoded.

Page header

Every page type except the bitmap page contains the following header:

[4] page number
[4] flags (indicates the type of the page)

Meta page

The meta page contains the following header:

[4]  magic (\xFFRBF)
[4]  flags
[4]  page count
[8]  wal ID
[4]  root records pgno
[4]  freelist pgno

Root Records page

A list of all b-tree names & their respective root page numbers are stored in root record pages. Once a bitmap root is created, it is never moved so the root record pages only need to be rewritten when creating, renaming, or deleting a b-tree. If records exceed the size of a page then they are overflowed to additional pages.

[4] page number
[4] flags
[4] overflow pgno
[*] bitmap records

Each bitmap record is represented as:

[4] pgno
[2] name size
[*] name

All bitmap records are loaded into memory when the file is opened.

Branch page

The branch page contains the following header:

[4] page number
[4] flags
[2] cell count
[*] cell index (2 * cell count)
[*] padding for 4-byte alignment

Each cell is formatted as:

[8] highbits
[4] flags
[4] page number

Leaf page

The leaf page contains the following header:

[4] page number
[4] flags
[2] cell count
[*] cell index (2 * cell count)

The leaf page contains a series of cells with the header of:

[8] highbits
[4] flag
[4] child count
[*] array or RLE data

Bitmap page

The data for the bitmap page takes up the entire 8KB.

Proof of Concept Notes

The following are notes made that are temporary for the RBF format. This will change as development progresses:

  • Transaction support is deferred
  • WAL support is deferred

Pattern of branch splits when adding data in ascending sorted order.

In this example, fan-out is restricted to 2 to make the drawings easy and the splits obvious. The data leaves are only allowed one roaring.Container key (ckey) in this example.

Each frame adds the next datum: A,B,C,D,E,... in order.

The letter represent data leaves, while numbers represent branch pages. The one exception is the first frame where the root is a leaf with data. Every frame after has normal branch at the root.

NB: there are only three places pages get written on addition: a) writeRoot b) putLeafCell c) putBranchCells


add A: root 3 A

add B: root 3 4 5 A B

add C: this sequence of updates occurs

  1. putLeafCell writes leaf B to page 5

  2. putLeafCell writes leaf C to page 6

  3. putBranchCells writes branch page 7 with children 4,5

  4. putBranchCells writes branch page 8 with child 6

  5. writeRoot writes branch cells to pgno 3, children: 7,8

    root 3 7 8 4 5 6 A B C


add D: root
3 7 8 4 5 6 9 A B C D


add E: root 3 12 13 7 8 11 4 5 6 9 10 A B C D E

add F: root 3 12 13 7 8 11 4 5 6 9 10 14 A B C D E F

add G: root 3 12 13 7 8 11 16 4 5 6 9 10 14 15 A B C D E F G

add H: root 3 12 13 7 8 11 16 4 5 6 9 10 14 15 17 A B C D E F G H

add I: root 3 21 22 12 13 20 7 8 11 16 19 4 5 6 9 10 14 15 17 18 A B C D E F G H I