mirror of
https://github.com/featurebasedb/featurebase.git
synced 2026-09-06 08:35:55 +00:00
CSV exports can now be done with the pilosactl application: $ pilosactl -d mydb -f myframe -o MYFILE.csv If `-o` is not specified then the CSV is written to STDOUT. The exporter combines all slices for the db/frame to into a single concatenated CSV file.
661 lines
18 KiB
Go
661 lines
18 KiB
Go
package pilosa_test
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import (
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"bytes"
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"flag"
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"io/ioutil"
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"math"
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"os"
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"reflect"
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"testing"
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"github.com/davecgh/go-spew/spew"
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"github.com/umbel/pilosa"
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)
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// Test flags
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var (
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FragmentPath = flag.String("fragment", "", "fragment path")
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)
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// SliceWidth is a helper reference to use when testing.
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const SliceWidth = pilosa.SliceWidth
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// Ensure a fragment can set a bit and retrieve it.
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func TestFragment_SetBit(t *testing.T) {
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f := MustOpenFragment("d", "f", 0)
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defer f.Close()
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// Set bits on the fragment.
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if _, err := f.SetBit(120, 1, nil, 0); err != nil {
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t.Fatal(err)
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} else if _, err := f.SetBit(120, 6, nil, 0); err != nil {
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t.Fatal(err)
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} else if _, err := f.SetBit(121, 0, nil, 0); err != nil {
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t.Fatal(err)
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}
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// Verify counts on bitmaps.
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if n := f.Bitmap(120).Count(); n != 2 {
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t.Fatalf("unexpected count: %d", n)
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} else if n := f.Bitmap(121).Count(); n != 1 {
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t.Fatalf("unexpected count: %d", n)
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}
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// Close and reopen the fragment & verify the data.
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if err := f.Reopen(); err != nil {
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t.Fatal(err)
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} else if n := f.Bitmap(120).Count(); n != 2 {
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t.Fatalf("unexpected count (reopen): %d", n)
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} else if n := f.Bitmap(121).Count(); n != 1 {
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t.Fatalf("unexpected count (reopen): %d", n)
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}
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}
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// Ensure a fragment can clear a set bit.
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func TestFragment_ClearBit(t *testing.T) {
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f := MustOpenFragment("d", "f", 0)
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defer f.Close()
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// Set and then clear bits on the fragment.
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if _, err := f.SetBit(1000, 1, nil, 0); err != nil {
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t.Fatal(err)
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} else if _, err := f.SetBit(1000, 2, nil, 0); err != nil {
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t.Fatal(err)
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} else if _, err := f.ClearBit(1000, 1); err != nil {
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t.Fatal(err)
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}
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// Verify count on bitmap.
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if n := f.Bitmap(1000).Count(); n != 1 {
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t.Fatalf("unexpected count: %d", n)
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}
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// Close and reopen the fragment & verify the data.
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if err := f.Reopen(); err != nil {
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t.Fatal(err)
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} else if n := f.Bitmap(1000).Count(); n != 1 {
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t.Fatalf("unexpected count (reopen): %d", n)
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}
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}
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// Ensure a fragment can snapshot correctly.
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func TestFragment_Snapshot(t *testing.T) {
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f := MustOpenFragment("d", "f", 0)
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defer f.Close()
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// Set and then clear bits on the fragment.
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if _, err := f.SetBit(1000, 1, nil, 0); err != nil {
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t.Fatal(err)
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} else if _, err := f.SetBit(1000, 2, nil, 0); err != nil {
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t.Fatal(err)
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} else if _, err := f.ClearBit(1000, 1); err != nil {
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t.Fatal(err)
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}
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// Snapshot bitmap and verify data.
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if err := f.Snapshot(); err != nil {
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t.Fatal(err)
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} else if n := f.Bitmap(1000).Count(); n != 1 {
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t.Fatalf("unexpected count: %d", n)
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}
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// Close and reopen the fragment & verify the data.
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if err := f.Reopen(); err != nil {
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t.Fatal(err)
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} else if n := f.Bitmap(1000).Count(); n != 1 {
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t.Fatalf("unexpected count (reopen): %d", n)
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}
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}
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// Ensure a fragment can iterate over all bits in order.
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func TestFragment_ForEachBit(t *testing.T) {
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f := MustOpenFragment("d", "f", 0)
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defer f.Close()
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// Set bits on the fragment.
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if _, err := f.SetBit(100, 20, nil, 0); err != nil {
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t.Fatal(err)
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} else if _, err := f.SetBit(2, 38, nil, 0); err != nil {
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t.Fatal(err)
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} else if _, err := f.SetBit(2, 37, nil, 0); err != nil {
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t.Fatal(err)
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}
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// Iterate over bits.
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var result [][2]uint64
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if err := f.ForEachBit(func(bitmapID, profileID uint64) error {
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result = append(result, [2]uint64{bitmapID, profileID})
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return nil
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}); err != nil {
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t.Fatal(err)
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}
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// Verify bits are correct.
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if !reflect.DeepEqual(result, [][2]uint64{{2, 37}, {2, 38}, {100, 20}}) {
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t.Fatalf("unexpected result: %#v", result)
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}
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}
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// Ensure a fragment can return the top n results.
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func TestFragment_Top(t *testing.T) {
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f := MustOpenFragment("d", "f", 0)
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defer f.Close()
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// Set bits on the bitmaps 100, 101, & 102.
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f.MustSetBits(100, 1, 3, 200)
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f.MustSetBits(101, 1)
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f.MustSetBits(102, 1, 2)
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// Retrieve top bitmaps.
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if pairs, err := f.Top(pilosa.TopOptions{N: 2}); err != nil {
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t.Fatal(err)
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} else if len(pairs) != 2 {
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t.Fatalf("unexpected count: %d", len(pairs))
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} else if pairs[0] != (pilosa.Pair{Key: 100, Count: 3}) {
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t.Fatalf("unexpected pair(0): %v", pairs[0])
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} else if pairs[1] != (pilosa.Pair{Key: 102, Count: 2}) {
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t.Fatalf("unexpected pair(1): %v", pairs[1])
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}
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}
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// Ensure a fragment can filter bitmaps when retrieving the top n bitmaps.
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func TestFragment_Top_Filter(t *testing.T) {
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f := MustOpenFragment("d", "f", 0)
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defer f.Close()
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// Set bits on the bitmaps 100, 101, & 102.
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f.MustSetBits(100, 1, 3, 200)
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f.MustSetBits(101, 1)
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f.MustSetBits(102, 1, 2)
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// Assign attributes.
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f.BitmapAttrStore.SetAttrs(101, map[string]interface{}{"x": uint64(10)})
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f.BitmapAttrStore.SetAttrs(102, map[string]interface{}{"x": uint64(20)})
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// Retrieve top bitmaps.
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if pairs, err := f.Top(pilosa.TopOptions{
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N: 2,
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FilterField: "x",
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FilterValues: []interface{}{uint64(10), uint64(15), uint64(20)},
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}); err != nil {
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t.Fatal(err)
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} else if len(pairs) != 2 {
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t.Fatalf("unexpected count: %d", len(pairs))
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} else if pairs[0] != (pilosa.Pair{Key: 102, Count: 2}) {
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t.Fatalf("unexpected pair(0): %v", pairs[0])
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} else if pairs[1] != (pilosa.Pair{Key: 101, Count: 1}) {
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t.Fatalf("unexpected pair(1): %v", pairs[1])
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}
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}
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// Ensure a fragment can return top bitmaps that intersect with an input bitmap.
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func TestFragment_TopN_Intersect(t *testing.T) {
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f := MustOpenFragment("d", "f", 0)
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defer f.Close()
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// Create an intersecting input bitmap.
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src := pilosa.NewBitmap(1, 2, 3)
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// Set bits on various bitmaps.
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f.MustSetBits(100, 1, 10, 11, 12) // one intersection
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f.MustSetBits(101, 1, 2, 3, 4) // three intersections
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f.MustSetBits(102, 1, 2, 4, 5, 6) // two intersections
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f.MustSetBits(103, 1000, 1001, 1002) // no intersection
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// Retrieve top bitmaps.
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if pairs, err := f.Top(pilosa.TopOptions{N: 3, Src: src}); err != nil {
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t.Fatal(err)
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} else if !reflect.DeepEqual(pairs, []pilosa.Pair{
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{Key: 101, Count: 3},
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{Key: 102, Count: 2},
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{Key: 100, Count: 1},
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}) {
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t.Fatalf("unexpected pairs: %s", spew.Sdump(pairs))
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}
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}
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// Ensure a fragment can return top bitmaps that have many bits set.
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func TestFragment_TopN_Intersect_Large(t *testing.T) {
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if testing.Short() {
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t.Skip("short mode")
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}
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f := MustOpenFragment("d", "f", 0)
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defer f.Close()
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// Create an intersecting input bitmap.
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src := pilosa.NewBitmap(
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980, 981, 982, 983, 984, 985, 986, 987, 988, 989,
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990, 991, 992, 993, 994, 995, 996, 997, 998, 999,
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)
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// Set bits on bitmaps 0 - 999. Higher bitmaps have higher bit counts.
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for i := uint64(0); i < 1000; i++ {
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for j := uint64(0); j < i; j++ {
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f.MustSetBits(i, j)
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}
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}
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// Retrieve top bitmaps.
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if pairs, err := f.Top(pilosa.TopOptions{N: 10, Src: src}); err != nil {
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t.Fatal(err)
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} else if !reflect.DeepEqual(pairs, []pilosa.Pair{
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{Key: 999, Count: 19},
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{Key: 998, Count: 18},
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{Key: 997, Count: 17},
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{Key: 996, Count: 16},
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{Key: 995, Count: 15},
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{Key: 994, Count: 14},
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{Key: 993, Count: 13},
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{Key: 992, Count: 12},
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{Key: 991, Count: 11},
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{Key: 990, Count: 10},
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}) {
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t.Fatalf("unexpected pairs: %s", spew.Sdump(pairs))
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}
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}
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// Ensure a fragment can return top bitmaps when specified by ID.
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func TestFragment_TopN_BitmapIDs(t *testing.T) {
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f := MustOpenFragment("d", "f", 0)
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defer f.Close()
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// Set bits on various bitmaps.
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f.MustSetBits(100, 1, 2, 3)
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f.MustSetBits(101, 4, 5, 6, 7)
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f.MustSetBits(102, 8, 9, 10, 11, 12)
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// Retrieve top bitmaps.
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if pairs, err := f.Top(pilosa.TopOptions{BitmapIDs: []uint64{100, 101, 200}}); err != nil {
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t.Fatal(err)
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} else if !reflect.DeepEqual(pairs, []pilosa.Pair{
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{Key: 101, Count: 4},
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{Key: 100, Count: 3},
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}) {
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t.Fatalf("unexpected pairs: %s", spew.Sdump(pairs))
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}
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}
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// Ensure fragment can return a checksum for its blocks.
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func TestFragment_Checksum(t *testing.T) {
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f := MustOpenFragment("d", "f", 0)
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defer f.Close()
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// Retrieve checksum and set bits.
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orig := f.Checksum()
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if _, err := f.SetBit(1, 200, nil, 0); err != nil {
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t.Fatal(err)
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} else if _, err := f.SetBit(pilosa.HashBlockSize*2, 200, nil, 0); err != nil {
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t.Fatal(err)
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}
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// Ensure new checksum is different.
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if chksum := f.Checksum(); bytes.Equal(chksum, orig) {
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t.Fatalf("expected checksum to change: %x", chksum, orig)
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}
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}
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// Ensure fragment can return a checksum for a given block.
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func TestFragment_Blocks(t *testing.T) {
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f := MustOpenFragment("d", "f", 0)
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defer f.Close()
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// Retrieve initial checksum.
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var prev []pilosa.FragmentBlock
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// Set first bit.
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if _, err := f.SetBit(0, 0, nil, 0); err != nil {
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t.Fatal(err)
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}
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blocks := f.Blocks()
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if blocks[0].Checksum == nil {
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t.Fatalf("expected checksum: %x", blocks[0].Checksum)
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}
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prev = blocks
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// Set bit on different bitmap.
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if _, err := f.SetBit(20, 0, nil, 0); err != nil {
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t.Fatal(err)
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}
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blocks = f.Blocks()
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if bytes.Equal(blocks[0].Checksum, prev[0].Checksum) {
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t.Fatalf("expected checksum to change: %x", blocks[0].Checksum)
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}
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prev = blocks
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// Set bit on different profile.
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if _, err := f.SetBit(20, 100, nil, 0); err != nil {
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t.Fatal(err)
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}
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blocks = f.Blocks()
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if bytes.Equal(blocks[0].Checksum, prev[0].Checksum) {
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t.Fatalf("expected checksum to change: %x", blocks[0].Checksum)
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}
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}
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// Ensure fragment returns an empty checksum if no data exists for a block.
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func TestFragment_Blocks_Empty(t *testing.T) {
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f := MustOpenFragment("d", "f", 0)
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defer f.Close()
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// Set bits on a different block.
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if _, err := f.SetBit(100, 1, nil, 0); err != nil {
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t.Fatal(err)
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}
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// Ensure checksum for block 1 is blank.
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if blocks := f.Blocks(); len(blocks) != 1 {
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t.Fatalf("unexpected block count: %d", len(blocks))
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} else if blocks[0].ID != 1 {
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t.Fatalf("unexpected block id: %d", blocks[0].ID)
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}
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}
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// Ensure a fragment's cache can be persisted between restarts.
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func TestFragment_LRUCache_Persistence(t *testing.T) {
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f := MustOpenFragment("d", "f", 0)
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defer f.Close()
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// Set bits on the fragment.
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for i := uint64(0); i < 1000; i++ {
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if _, err := f.SetBit(i, 0, nil, 0); err != nil {
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t.Fatal(err)
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}
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}
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// Verify correct cache type and size.
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if cache, ok := f.Cache().(*pilosa.LRUCache); !ok {
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t.Fatalf("unexpected cache: %T", f.Cache())
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} else if cache.Len() != 1000 {
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t.Fatalf("unexpected cache len: %d", cache.Len())
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}
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// Reopen the fragment.
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if err := f.Reopen(); err != nil {
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t.Fatal(err)
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}
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// Re-verify correct cache type and size.
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if cache, ok := f.Cache().(*pilosa.LRUCache); !ok {
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t.Fatalf("unexpected cache: %T", f.Cache())
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} else if cache.Len() != 1000 {
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t.Fatalf("unexpected cache len: %d", cache.Len())
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}
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}
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// Ensure a fragment's cache can be persisted between restarts.
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func TestFragment_RankCache_Persistence(t *testing.T) {
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f := MustOpenFragment("d", "f.n", 0)
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defer f.Close()
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// Set bits on the fragment.
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for i := uint64(0); i < 1000; i++ {
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if _, err := f.SetBit(i, 0, nil, 0); err != nil {
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t.Fatal(err)
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}
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}
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// Verify correct cache type and size.
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if cache, ok := f.Cache().(*pilosa.RankCache); !ok {
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t.Fatalf("unexpected cache: %T", f.Cache())
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} else if cache.Len() != 1000 {
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t.Fatalf("unexpected cache len: %d", cache.Len())
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}
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// Reopen the fragment.
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if err := f.Reopen(); err != nil {
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t.Fatal(err)
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}
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// Re-verify correct cache type and size.
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if cache, ok := f.Cache().(*pilosa.RankCache); !ok {
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t.Fatalf("unexpected cache: %T", f.Cache())
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} else if cache.Len() != 1000 {
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t.Fatalf("unexpected cache len: %d", cache.Len())
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}
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}
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// Ensure a fragment can be copied to another fragment.
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func TestFragment_WriteTo_ReadFrom(t *testing.T) {
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f0 := MustOpenFragment("d", "f", 0)
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defer f0.Close()
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// Set and then clear bits on the fragment.
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if _, err := f0.SetBit(1000, 1, nil, 0); err != nil {
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t.Fatal(err)
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} else if _, err := f0.SetBit(1000, 2, nil, 0); err != nil {
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t.Fatal(err)
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} else if _, err := f0.ClearBit(1000, 1); err != nil {
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t.Fatal(err)
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}
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// Verify cache is populated.
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if n := f0.Cache().Len(); n != 1 {
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t.Fatalf("unexpected cache size: %d", n)
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}
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// Write fragment to a buffer.
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var buf bytes.Buffer
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wn, err := f0.WriteTo(&buf)
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if err != nil {
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t.Fatal(err)
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}
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// Read into another fragment.
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f1 := MustOpenFragment("d", "f", 0)
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if rn, err := f1.ReadFrom(&buf); err != nil {
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t.Fatal(err)
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} else if wn != rn {
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t.Fatalf("read/write byte count mismatch: wn=%d, rn=%d", wn, rn)
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}
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// Verify cache is in other fragment.
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if n := f1.Cache().Len(); n != 1 {
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t.Fatalf("unexpected cache size: %d", n)
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}
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// Verify data in other fragment.
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if a := f1.Bitmap(1000).Bits(); !reflect.DeepEqual(a, []uint64{2}) {
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t.Fatalf("unexpected bits: %+v", a)
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}
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// Close and reopen the fragment & verify the data.
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if err := f1.Reopen(); err != nil {
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t.Fatal(err)
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} else if n := f1.Cache().Len(); n != 1 {
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t.Fatalf("unexpected cache size (reopen): %d", n)
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} else if a := f1.Bitmap(1000).Bits(); !reflect.DeepEqual(a, []uint64{2}) {
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t.Fatalf("unexpected bits (reopen): %+v", a)
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}
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}
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/*
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func BenchmarkFragment_BlockChecksum_Fill1(b *testing.B) { benchmarkFragmentBlockChecksum(b, 0.01) }
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func BenchmarkFragment_BlockChecksum_Fill10(b *testing.B) { benchmarkFragmentBlockChecksum(b, 0.10) }
|
|
func BenchmarkFragment_BlockChecksum_Fill50(b *testing.B) { benchmarkFragmentBlockChecksum(b, 0.50) }
|
|
|
|
func benchmarkFragmentBlockChecksum(b *testing.B, fillPercent float64) {
|
|
f := MustOpenFragment("d", "f", 0)
|
|
defer f.Close()
|
|
|
|
// Fill fragment.
|
|
bitmapIDs, profileIDs := GenerateImportFill(pilosa.HashBlockSize, fillPercent)
|
|
if err := f.Import(bitmapIDs, profileIDs); err != nil {
|
|
b.Fatal(err)
|
|
}
|
|
|
|
b.ResetTimer()
|
|
b.ReportAllocs()
|
|
|
|
// Calculate block checksum.
|
|
for i := 0; i < b.N; i++ {
|
|
f.InvalidateChecksums()
|
|
|
|
if chksum := f.BlockChecksum(0); chksum == nil {
|
|
b.Fatal("expected checksum")
|
|
}
|
|
}
|
|
}
|
|
*/
|
|
|
|
func BenchmarkFragment_Blocks(b *testing.B) {
|
|
if *FragmentPath == "" {
|
|
b.Skip("no fragment specified")
|
|
}
|
|
|
|
// Open the fragment specified by the path.
|
|
f := pilosa.NewFragment(*FragmentPath, "d", "f", 0)
|
|
if err := f.Open(); err != nil {
|
|
b.Fatal(err)
|
|
}
|
|
defer f.Close()
|
|
|
|
// Reset timer and execute benchmark.
|
|
b.ResetTimer()
|
|
for i := 0; i < b.N; i++ {
|
|
if a := f.Blocks(); len(a) == 0 {
|
|
b.Fatal("no blocks in fragment")
|
|
}
|
|
}
|
|
}
|
|
|
|
func BenchmarkFragment_IntersectionCount(b *testing.B) {
|
|
f := MustOpenFragment("d", "f", 0)
|
|
defer f.Close()
|
|
f.MaxOpN = math.MaxInt32
|
|
|
|
// Generate some intersecting data.
|
|
for i := 0; i < 10000; i += 2 {
|
|
if _, err := f.SetBit(1, uint64(i), nil, 0); err != nil {
|
|
b.Fatal(err)
|
|
}
|
|
}
|
|
for i := 0; i < 10000; i += 3 {
|
|
if _, err := f.SetBit(2, uint64(i), nil, 0); err != nil {
|
|
b.Fatal(err)
|
|
}
|
|
}
|
|
|
|
// Snapshot to disk before benchmarking.
|
|
if err := f.Snapshot(); err != nil {
|
|
b.Fatal(err)
|
|
}
|
|
|
|
// Start benchmark
|
|
b.ResetTimer()
|
|
for i := 0; i < b.N; i++ {
|
|
if n := f.Bitmap(1).IntersectionCount(f.Bitmap(2)); n == 0 {
|
|
b.Fatalf("unexpected count: %d", n)
|
|
}
|
|
}
|
|
}
|
|
|
|
// Fragment is a test wrapper for pilosa.Fragment.
|
|
type Fragment struct {
|
|
*pilosa.Fragment
|
|
BitmapAttrStore *AttrStore
|
|
}
|
|
|
|
// NewFragment returns a new instance of Fragment with a temporary path.
|
|
func NewFragment(db, frame string, slice uint64) *Fragment {
|
|
file, err := ioutil.TempFile("", "pilosa-fragment-")
|
|
if err != nil {
|
|
panic(err)
|
|
}
|
|
file.Close()
|
|
|
|
f := &Fragment{
|
|
Fragment: pilosa.NewFragment(file.Name(), db, frame, slice),
|
|
BitmapAttrStore: MustOpenAttrStore(),
|
|
}
|
|
f.Fragment.BitmapAttrStore = f.BitmapAttrStore.AttrStore
|
|
return f
|
|
}
|
|
|
|
// MustOpenFragment creates and opens an fragment at a temporary path. Panic on error.
|
|
func MustOpenFragment(db, frame string, slice uint64) *Fragment {
|
|
f := NewFragment(db, frame, slice)
|
|
if err := f.Open(); err != nil {
|
|
panic(err)
|
|
}
|
|
return f
|
|
}
|
|
|
|
// Close closes the fragment and removes all underlying data.
|
|
func (f *Fragment) Close() error {
|
|
defer os.Remove(f.Path())
|
|
defer os.Remove(f.CachePath())
|
|
defer f.BitmapAttrStore.Close()
|
|
return f.Fragment.Close()
|
|
}
|
|
|
|
// Reopen closes the fragment and reopens it as a new instance.
|
|
func (f *Fragment) Reopen() error {
|
|
path := f.Path()
|
|
if err := f.Fragment.Close(); err != nil {
|
|
return err
|
|
}
|
|
|
|
f.Fragment = pilosa.NewFragment(path, f.DB(), f.Frame(), f.Slice())
|
|
f.Fragment.BitmapAttrStore = f.BitmapAttrStore.AttrStore
|
|
if err := f.Open(); err != nil {
|
|
return err
|
|
}
|
|
return nil
|
|
}
|
|
|
|
// MustSetBits sets bits on a bitmap. Panic on error.
|
|
// This function does not accept a timestamp or quantum.
|
|
func (f *Fragment) MustSetBits(bitmapID uint64, profileIDs ...uint64) {
|
|
for _, profileID := range profileIDs {
|
|
if _, err := f.SetBit(bitmapID, profileID, nil, 0); err != nil {
|
|
panic(err)
|
|
}
|
|
}
|
|
}
|
|
|
|
// MustClearBits clears bits on a bitmap. Panic on error.
|
|
func (f *Fragment) MustClearBits(bitmapID uint64, profileIDs ...uint64) {
|
|
for _, profileID := range profileIDs {
|
|
if _, err := f.ClearBit(bitmapID, profileID); err != nil {
|
|
panic(err)
|
|
}
|
|
}
|
|
}
|
|
|
|
// BitmapAttrStore provides simple storage for attributes.
|
|
type BitmapAttrStore struct {
|
|
attrs map[uint64]map[string]interface{}
|
|
}
|
|
|
|
// NewBitmapAttrStore returns a new instance of BitmapAttrStore.
|
|
func NewBitmapAttrStore() *BitmapAttrStore {
|
|
return &BitmapAttrStore{
|
|
attrs: make(map[uint64]map[string]interface{}),
|
|
}
|
|
}
|
|
|
|
// BitmapAttrs returns the attributes set to a bitmap id.
|
|
func (s *BitmapAttrStore) BitmapAttrs(id uint64) (map[string]interface{}, error) {
|
|
return s.attrs[id], nil
|
|
}
|
|
|
|
// SetBitmapAttrs assigns a set of attributes to a bitmap id.
|
|
func (s *BitmapAttrStore) SetBitmapAttrs(id uint64, m map[string]interface{}) {
|
|
s.attrs[id] = m
|
|
}
|
|
|
|
// GenerateImportFill generates a set of bits pairs that evenly fill a fragment chunk.
|
|
func GenerateImportFill(bitmapN int, pct float64) (bitmapIDs, profileIDs []uint64) {
|
|
ipct := int(pct * 100)
|
|
for i := 0; i < SliceWidth*bitmapN; i++ {
|
|
if i%100 >= ipct {
|
|
continue
|
|
}
|
|
|
|
bitmapIDs = append(bitmapIDs, uint64(i%SliceWidth))
|
|
profileIDs = append(profileIDs, uint64(i/SliceWidth))
|
|
}
|
|
return
|
|
}
|