mirror of
https://github.com/featurebasedb/featurebase.git
synced 2026-08-28 02:44:59 +00:00
4396 lines
110 KiB
Go
4396 lines
110 KiB
Go
// Copyright 2017 Pilosa Corp.
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//
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// Licensed under the Apache License, Version 2.0 (the "License");
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// you may not use this file except in compliance with the License.
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// You may obtain a copy of the License at
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//
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// http://www.apache.org/licenses/LICENSE-2.0
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//
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// Unless required by applicable law or agreed to in writing, software
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// distributed under the License is distributed on an "AS IS" BASIS,
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// WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
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// See the License for the specific language governing permissions and
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// limitations under the License.
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// Package roaring implements roaring bitmaps with support for incremental changes.
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package roaring
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import (
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"encoding/binary"
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"fmt"
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"hash/fnv"
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"io"
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"math/bits"
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"sort"
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"unsafe"
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"github.com/pkg/errors"
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)
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const (
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// MagicNumber is an identifier, in bytes 0-1 of the file.
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MagicNumber = uint32(12348)
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// storageVersion indicates the storage version, in bytes 2-3.
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storageVersion = uint32(0)
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// cookie is the first four bytes in a roaring bitmap file,
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// formed by joining MagicNumber and storageVersion
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cookie = MagicNumber + storageVersion<<16
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// headerBaseSize is the size in bytes of the cookie and key count at the
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// beginning of a file.
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headerBaseSize = 4 + 4
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// runCountHeaderSize is the size in bytes of the run count stored
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// at the beginning of every serialized run container.
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runCountHeaderSize = 2
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// interval16Size is the size of a single run in a container.runs.
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interval16Size = 4
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// bitmapN is the number of values in a container.bitmap.
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bitmapN = (1 << 16) / 64
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maxContainerVal = 0xffff
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// maxContainerKey is the key representing the last container in a full row.
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// It is the full bitmap space (2^64) divided by container width (2^16).
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maxContainerKey = (1 << 48) - 1
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)
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const (
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containerArray byte = iota + 1 // slice of bit position values
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containerBitmap // slice of 1024 uint64s
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containerRun // container of run-encoded bits
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)
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// map used for a more descriptive print
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var containerTypeNames = map[byte]string{
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containerArray: "array",
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containerBitmap: "bitmap",
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containerRun: "run",
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}
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type Containers interface {
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// Get returns nil if the key does not exist.
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Get(key uint64) *Container
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// Put adds the container at key.
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Put(key uint64, c *Container)
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// PutContainerValues updates an existing container at key.
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// If a container does not exist for key, a new one is allocated.
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// TODO(2.0) make n int32
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PutContainerValues(key uint64, typ byte, n int, mapped bool)
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// Remove takes the container at key out.
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Remove(key uint64)
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// GetOrCreate returns the container at key, creating a new empty container if necessary.
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GetOrCreate(key uint64) *Container
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// Clone does a deep copy of Containers, including cloning all containers contained.
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Clone() Containers
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// Last returns the highest key and associated container.
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Last() (key uint64, c *Container)
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// Size returns the number of containers stored.
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Size() int
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// Iterator returns a Contiterator which after a call to Next(), a call to Value() will
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// return the first container at or after key. found will be true if a
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// container is found at key.
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Iterator(key uint64) (citer ContainerIterator, found bool)
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Count() uint64
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// Reset clears the containers collection to allow for recycling during snapshot
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Reset()
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// Repair will repair the cardinality of any containers whose cardinality were corrupted
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// due to optimized operations.
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Repair()
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}
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type ContainerIterator interface {
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Next() bool
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Value() (uint64, *Container)
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}
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// Bitmap represents a roaring bitmap.
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type Bitmap struct {
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Containers Containers
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// Number of bit change operations written to the writer. Some operations
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// contain multiple values, each of those counts the number of values rather
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// than counting as one operation.
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opN int
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// Writer where operations are appended to.
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OpWriter io.Writer
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}
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// NewBitmap returns a Bitmap with an initial set of values.
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func NewBitmap(a ...uint64) *Bitmap {
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b := &Bitmap{
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Containers: newSliceContainers(),
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}
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b.AddN(a...)
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return b
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}
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// NewFileBitmap returns a Bitmap with an initial set of values, used for file storage.
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// By default, this is a copy of NewBitmap, but is replaced with B+Tree in server/enterprise.go
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var NewFileBitmap func(a ...uint64) *Bitmap = NewBTreeBitmap
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// Clone returns a heap allocated copy of the bitmap.
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// Note: The OpWriter IS NOT copied to the new bitmap.
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func (b *Bitmap) Clone() *Bitmap {
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if b == nil {
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return nil
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}
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// Create a copy of the bitmap structure.
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other := &Bitmap{
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Containers: b.Containers.Clone(),
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}
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return other
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}
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// Add adds values to the bitmap. TODO(2.0) deprecate - use the more general
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// AddN (though be aware that it modifies 'a' in place).
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func (b *Bitmap) Add(a ...uint64) (changed bool, err error) {
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changed = false
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for _, v := range a {
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// Create an add operation.
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op := &op{typ: opTypeAdd, value: v}
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// Write operation to op log.
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if err := b.writeOp(op); err != nil {
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return false, err
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}
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// Apply to the in-memory bitmap.
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if b.DirectAdd(v) {
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changed = true
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}
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}
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return changed, nil
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}
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// AddN adds values to the bitmap, appending them all to the op log in a batched
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// write. It returns the number of changed bits.
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func (b *Bitmap) AddN(a ...uint64) (changed int, err error) {
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if len(a) == 0 {
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return 0, nil
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}
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changed = b.DirectAddN(a...) // modifies a in-place
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if b.OpWriter != nil {
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op := &op{
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typ: opTypeAddBatch,
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values: a[:changed],
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}
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if err := b.writeOp(op); err != nil {
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b.DirectRemoveN(op.values...) // reset data since we're returning an error
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return 0, errors.Wrap(err, "writing to op log")
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}
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}
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return changed, nil
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}
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// DirectAddN sets multiple bits in the bitmap, returning how many changed. It
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// modifies the slice 'a' in place such that once it's complete a[:changed] will
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// be list of changed bits. It is more efficient than repeated calls to
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// DirectAdd for semi-dense sorted data because it reuses the container from the
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// previous value if the new value has the same highbits instead of looking it
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// up each time. TODO: if Containers implementations cached the last few
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// Container objects returned from calls like Get and GetOrCreate, this
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// optimization would be less useful.
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func (b *Bitmap) DirectAddN(a ...uint64) (changed int) {
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return b.directOpN((*Container).add, a...)
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}
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// DirectRemoveN behaves analgously to DirectAddN.
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func (b *Bitmap) DirectRemoveN(a ...uint64) (changed int) {
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return b.directOpN((*Container).remove, a...)
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}
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// directOpN contains the logic for DirectAddN and DirectRemoveN. Theoretically,
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// it could be used by anything that wanted to apply a boolean-returning
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// container level operation across a list of values and return the number of
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// trues while modifying the list of values in place to contain the
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// true-returning values in order.
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func (b *Bitmap) directOpN(op func(c *Container, v uint16) bool, a ...uint64) (changed int) {
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hb := uint64(0xFFFFFFFFFFFFFFFF) // impossible sentinel value
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var cont *Container
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for _, v := range a {
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if newhb := highbits(v); newhb != hb {
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hb = newhb
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cont = b.Containers.GetOrCreate(hb)
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}
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if op(cont, lowbits(v)) {
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a[changed] = v
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changed++
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}
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}
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return changed
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}
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// DirectAdd adds a value to the bitmap by bypassing the op log. TODO(2.0)
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// deprecate in favor of DirectAddN.
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func (b *Bitmap) DirectAdd(v uint64) bool {
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cont := b.Containers.GetOrCreate(highbits(v))
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return cont.add(lowbits(v))
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}
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// Contains returns true if v is in the bitmap.
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func (b *Bitmap) Contains(v uint64) bool {
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c := b.Containers.Get(highbits(v))
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if c == nil {
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return false
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}
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return c.Contains(lowbits(v))
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}
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// Remove removes values from the bitmap (writing to the op log if available).
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// TODO(2.0) deprecate - use the more general RemoveN (though be aware that it
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// modifies 'a' in place).
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func (b *Bitmap) Remove(a ...uint64) (changed bool, err error) {
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changed = false
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for _, v := range a {
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// Create an add operation.
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op := &op{typ: opTypeRemove, value: v}
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// Write operation to op log.
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if err := b.writeOp(op); err != nil {
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return false, err
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}
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// Apply operation to the bitmap.
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if op.apply(b) {
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changed = true
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}
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}
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return changed, nil
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}
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// RemoveN behaves analagously to AddN.
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func (b *Bitmap) RemoveN(a ...uint64) (changed int, err error) {
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if len(a) == 0 {
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return 0, nil
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}
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changed = b.DirectRemoveN(a...) // modifies a in-place
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if b.OpWriter != nil {
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op := &op{
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typ: opTypeRemoveBatch,
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values: a[:changed],
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}
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if err := b.writeOp(op); err != nil {
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b.DirectAddN(op.values...) // reset data since we're returning an error
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return 0, errors.Wrap(err, "writing to op log")
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}
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}
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return changed, nil
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}
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func (b *Bitmap) remove(v uint64) bool {
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c := b.Containers.Get(highbits(v))
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if c == nil {
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return false
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}
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// TODO - do nil check inside c.remove?
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return c.remove(lowbits(v))
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}
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// Max returns the highest value in the bitmap.
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// Returns zero if the bitmap is empty.
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func (b *Bitmap) Max() uint64 {
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if b.Containers.Size() == 0 {
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return 0
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}
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hb, c := b.Containers.Last()
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lb := c.max()
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return hb<<16 | uint64(lb)
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}
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// Count returns the number of bits set in the bitmap.
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func (b *Bitmap) Count() (n uint64) {
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return b.Containers.Count()
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}
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// Any returns "b.Count() > 0"... but faster than doing that.
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func (b *Bitmap) Any() bool {
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iter, _ := b.Containers.Iterator(0)
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// TODO (jaffee) I'm not sure if it's possible/legal to have an empty
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// container, so this loop may be totally unnecessary. In theory, any empty
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// container should be removed from the bitmap though.
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for iter.Next() {
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_, c := iter.Value()
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if c.n > 0 {
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return true
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}
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}
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return false
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}
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// Size returns the number of bytes required for the bitmap.
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func (b *Bitmap) Size() int {
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numbytes := 0
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citer, _ := b.Containers.Iterator(0)
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for citer.Next() {
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_, c := citer.Value()
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numbytes += c.size()
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}
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return numbytes
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}
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// CountRange returns the number of bits set between [start, end).
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func (b *Bitmap) CountRange(start, end uint64) (n uint64) {
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if b.Containers.Size() == 0 {
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return
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}
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skey := highbits(start)
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ekey := highbits(end)
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citer, found := b.Containers.Iterator(highbits(start))
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// If range is entirely in one container then just count that range.
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if found && skey == ekey {
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citer.Next()
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_, c := citer.Value()
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return uint64(c.countRange(int32(lowbits(start)), int32(lowbits(end))))
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}
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for citer.Next() {
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k, c := citer.Value()
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if k < skey {
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// TODO remove once we've validated this stuff works
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panic("should be impossible for k to be less than skey")
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}
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if k == skey {
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n += uint64(c.countRange(int32(lowbits(start)), maxContainerVal+1))
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continue
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}
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if k < ekey {
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n += uint64(c.n)
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continue
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}
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if k == ekey {
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n += uint64(c.countRange(0, int32(lowbits(end))))
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break
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}
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if k > ekey {
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break
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}
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}
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return n
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}
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// Slice returns a slice of all integers in the bitmap.
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func (b *Bitmap) Slice() []uint64 {
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var a []uint64
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itr := b.Iterator()
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itr.Seek(0)
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for v, eof := itr.Next(); !eof; v, eof = itr.Next() {
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a = append(a, v)
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}
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return a
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}
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// SliceRange returns a slice of integers between [start, end).
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func (b *Bitmap) SliceRange(start, end uint64) []uint64 {
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var a []uint64
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itr := b.Iterator()
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itr.Seek(start)
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for v, eof := itr.Next(); !eof && v < end; v, eof = itr.Next() {
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a = append(a, v)
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}
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return a
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}
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// ForEach executes fn for each value in the bitmap.
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func (b *Bitmap) ForEach(fn func(uint64)) {
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itr := b.Iterator()
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itr.Seek(0)
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for v, eof := itr.Next(); !eof; v, eof = itr.Next() {
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fn(v)
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}
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}
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// ForEachRange executes fn for each value in the bitmap between [start, end).
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func (b *Bitmap) ForEachRange(start, end uint64, fn func(uint64)) {
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itr := b.Iterator()
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itr.Seek(start)
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for v, eof := itr.Next(); !eof && v < end; v, eof = itr.Next() {
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fn(v)
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}
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}
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// OffsetRange returns a new bitmap with a containers offset by start.
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func (b *Bitmap) OffsetRange(offset, start, end uint64) *Bitmap {
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if lowbits(offset) != 0 {
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panic("offset must not contain low bits")
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}
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if lowbits(start) != 0 {
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panic("range start must not contain low bits")
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}
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if lowbits(end) != 0 {
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panic("range end must not contain low bits")
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}
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off := highbits(offset)
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hi0, hi1 := highbits(start), highbits(end)
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citer, _ := b.Containers.Iterator(hi0)
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other := NewBitmap()
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for citer.Next() {
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k, c := citer.Value()
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if k >= hi1 {
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break
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}
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other.Containers.Put(off+(k-hi0), c)
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}
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return other
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}
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// container returns the container with the given key.
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func (b *Bitmap) container(key uint64) *Container {
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return b.Containers.Get(key)
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}
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// IntersectionCount returns the number of set bits that would result in an
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// intersection between b and other. It is more efficient than actually
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// intersecting the two and counting the result.
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func (b *Bitmap) IntersectionCount(other *Bitmap) uint64 {
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var n uint64
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iiter, _ := b.Containers.Iterator(0)
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jiter, _ := other.Containers.Iterator(0)
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i, j := iiter.Next(), jiter.Next()
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ki, ci := iiter.Value()
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kj, cj := jiter.Value()
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for i && j {
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if ki < kj {
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i = iiter.Next()
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ki, ci = iiter.Value()
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} else if ki > kj {
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j = jiter.Next()
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kj, cj = jiter.Value()
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} else {
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n += uint64(intersectionCount(ci, cj))
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i, j = iiter.Next(), jiter.Next()
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ki, ci = iiter.Value()
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kj, cj = jiter.Value()
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}
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}
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return n
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}
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// Intersect returns the intersection of b and other.
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func (b *Bitmap) Intersect(other *Bitmap) *Bitmap {
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output := NewBitmap()
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iiter, _ := b.Containers.Iterator(0)
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jiter, _ := other.Containers.Iterator(0)
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i, j := iiter.Next(), jiter.Next()
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ki, ci := iiter.Value()
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kj, cj := jiter.Value()
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for i && j {
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if ki < kj {
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i = iiter.Next()
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ki, ci = iiter.Value()
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} else if ki > kj {
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j = jiter.Next()
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kj, cj = jiter.Value()
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} else { // ki == kj
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output.Containers.Put(ki, intersect(ci, cj))
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i, j = iiter.Next(), jiter.Next()
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ki, ci = iiter.Value()
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kj, cj = jiter.Value()
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}
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}
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return output
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}
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// Union returns the bitwise union of b and others as a new bitmap.
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func (b *Bitmap) Union(others ...*Bitmap) *Bitmap {
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if len(others) == 1 {
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output := NewBitmap()
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b.unionIntoTargetSingle(output, others[0])
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return output
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}
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output := b.Clone()
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output.UnionInPlace(others...)
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return output
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}
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// UnionInPlace returns the bitwise union of b and others, modifying
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// b in place.
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func (b *Bitmap) UnionInPlace(others ...*Bitmap) {
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b.unionInPlace(others...)
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}
|
|
|
|
func (b *Bitmap) unionIntoTargetSingle(target *Bitmap, other *Bitmap) {
|
|
iiter, _ := b.Containers.Iterator(0)
|
|
jiter, _ := other.Containers.Iterator(0)
|
|
i, j := iiter.Next(), jiter.Next()
|
|
ki, ci := iiter.Value()
|
|
kj, cj := jiter.Value()
|
|
for i || j {
|
|
if i && (!j || ki < kj) {
|
|
target.Containers.Put(ki, ci.Clone())
|
|
i = iiter.Next()
|
|
ki, ci = iiter.Value()
|
|
} else if j && (!i || ki > kj) {
|
|
target.Containers.Put(kj, cj.Clone())
|
|
j = jiter.Next()
|
|
kj, cj = jiter.Value()
|
|
} else { // ki == kj
|
|
target.Containers.Put(ki, union(ci, cj))
|
|
i, j = iiter.Next(), jiter.Next()
|
|
ki, ci = iiter.Value()
|
|
kj, cj = jiter.Value()
|
|
}
|
|
}
|
|
}
|
|
|
|
// unionInPlace stores the union of b and others into b. The others will
|
|
// be left unchanged.
|
|
//
|
|
// This function performs an n-way union of n bitmaps. It performs this in an
|
|
// optimized manner looping through all the bitmaps and performing unions one
|
|
// container at a time. As a result, instead of generating many intermediary
|
|
// containers for each union operation for a given container key, only one
|
|
// new container needs to be allocated (or re-used) regardless of how many bitmaps
|
|
// participate in the union. This significantly reduces allocations. In addition,
|
|
// because we perform the unions one container at a time across all the bitmaps, we
|
|
// can calculate summary statistics that allow us to make more efficient decisions
|
|
// up front. For instance, if we have a non-bitmap target container, but we
|
|
// expect more than ArrayMaxSize bits, we can convert to bitmap preemptively.
|
|
// This will sometimes be wrong (we can't really tell how many bits we'll have
|
|
// after a union) but is probably close enough to be useful. This will save
|
|
// some reallocations for cases where several consecutive ops have array
|
|
// representations, and we expect to have to convert to a bitmap eventually;
|
|
// we don't allocate larger and larger array slices before doing that.
|
|
//
|
|
// An additional optimization that this function makes is that it recognizes that even when
|
|
// CPU support is present, performing the popcount() operation isn't free. Imagine a scenario
|
|
// where 10 bitset containers are being unioned together one after the next. If every
|
|
// bitset<->bitset union operation needs to keep the containers' cardinality up to date, then
|
|
// the algorithm will waste a lot of time performing intermediary popcount() operations that
|
|
// will immediately be invalidated by the next union operation. As a result, we allow the cardinality
|
|
// of containers to degrade when we perform the in-place union operations, and then when the algorithm
|
|
// completes we "repair" all the containers by performing the popcount() operation one time. This means
|
|
// that we only ever have to do O(1) popcount operations per container instead of O(n) where n is the
|
|
// number of containers with the same key that are being unioned together.
|
|
//
|
|
// The algorithm works by iterating through all of the containers in all of the bitmaps concurrently.
|
|
// At every "tick" of the outermost loop, we increment our pointer into the bitmaps list of containers
|
|
// by 1 (if we haven't reached the end of the containers for that bitmap.)
|
|
//
|
|
// We then loop through all of the "current" values(containers) for all of the bitmaps
|
|
// and for each container with a specific key that we encounter, we scan forward to see if any of the
|
|
// other bitmaps have a container for the same key. If so, we calculate some summary statistics and
|
|
// then use that information to make a decision about how to union all of the containers with the same
|
|
// key together, perform the union, mark the unioned containers as "handled" and then move on to the next
|
|
// batch of containers that share the same key.
|
|
//
|
|
// We repeat this process until every single bitmaps current container has been "handled". Then we start the
|
|
// outer loop over again and the process repeats until we've iterated through every container in every bitmap
|
|
// and unioned everything into a single target bitmap.
|
|
//
|
|
// The diagram below shows the iteration state of four different bitmaps as the algorithm progresses them.
|
|
// The diagrams should BE interpreted from left -> right, top -> bottom. The X's represent a container in
|
|
// the bitmap at a specific key, ^ symbol represents the bitmaps current container iteration position,
|
|
// and the - symbol represents a container that is at the current iteration position, but has been marked as "handled".
|
|
//
|
|
// ---------------------------- | ---------------------------- | ----------------------------
|
|
// Bitmap 1 |___X____________X__________| | |___X____________X__________| | |___X____________X__________|
|
|
// ^ | _ |
|
|
// ---------------------------- | ---------------------------- | ----------------------------
|
|
// Bitmap 2 |_______X________X______X___| | |_______X_______________X___| | |_______X_______________X___|
|
|
// ^ | ^ |
|
|
// ---------------------------- | ---------------------------- | ----------------------------
|
|
// Bitmap 3 |_______X___________________| | |_______X___________________| | |_______X___________________|
|
|
// ^ | ^ |
|
|
// ---------------------------- | ---------------------------- | ----------------------------
|
|
// Bitmap 4 |___X_______________________| | |___X_______________________| | |___X_______________________|
|
|
// ^ | _ |
|
|
// ------------------------------------------------------------------------------------------------------------------------
|
|
// ---------------------------- | ---------------------------- | ----------------------------
|
|
// Bitmap 1 |___X____________X__________| | |___X____________X__________| | |___X____________X__________|
|
|
// _ | ^ | _
|
|
// ---------------------------- | ---------------------------- | ----------------------------
|
|
// Bitmap 2 |_______X_______________X___| | |_______X_______________X___| | |_______X_______________X___|
|
|
// _ | ^ | ^
|
|
// ---------------------------- | ---------------------------- | ----------------------------
|
|
// Bitmap 3 |_______X___________________| | |_______X___________________| | |_______X___________________|
|
|
// _ | |
|
|
// ---------------------------- | ---------------------------- | ----------------------------
|
|
// Bitmap 4 |___X_______________________| | |___X_______________________| | |___X_______________________|
|
|
// _
|
|
func (b *Bitmap) unionInPlace(others ...*Bitmap) {
|
|
var (
|
|
requiredSliceSize = len(others)
|
|
// To avoid having to allocate a slice everytime, if the number of bitmaps
|
|
// being unioned is small enough we can just use this stack-allocated array.
|
|
staticHandledIters = [20]handledIter{}
|
|
bitmapIters handledIters
|
|
target = b
|
|
)
|
|
|
|
if requiredSliceSize <= 20 {
|
|
bitmapIters = staticHandledIters[:0]
|
|
} else {
|
|
bitmapIters = make(handledIters, 0, requiredSliceSize)
|
|
}
|
|
|
|
for _, other := range others {
|
|
otherIter, _ := other.Containers.Iterator(0)
|
|
if otherIter.Next() {
|
|
bitmapIters = append(bitmapIters, handledIter{
|
|
iter: otherIter,
|
|
hasNext: true,
|
|
handled: false,
|
|
})
|
|
}
|
|
}
|
|
|
|
// Loop until we've exhausted every iter.
|
|
hasNext := true
|
|
for hasNext {
|
|
// Loop until every iters current value has been handled.
|
|
for i, iIter := range bitmapIters {
|
|
if !iIter.hasNext || iIter.handled {
|
|
// Either we've exhausted this iter (it has no more containers), or
|
|
// we've already handled the current container by unioning it with
|
|
// one of the containers we encountered earlier.
|
|
continue
|
|
}
|
|
|
|
iKey, iContainer := iIter.iter.Value()
|
|
expectedN := int64(0)
|
|
|
|
// determine whether we have a target to union into.
|
|
tContainer := target.Containers.Get(iKey)
|
|
// if the target's full, short-circuit out.
|
|
if tContainer != nil {
|
|
if tContainer.n == maxContainerVal+1 {
|
|
bitmapIters.markItersWithKeyAsHandled(i, iKey)
|
|
continue
|
|
}
|
|
expectedN = int64(tContainer.n)
|
|
}
|
|
// Check i and later iters for any max-range containers, and
|
|
// find out how many there are.
|
|
summaryStats := bitmapIters[i:].calculateSummaryStats(iKey)
|
|
if summaryStats.hasMaxRange {
|
|
// One (or more) of the containers represented the maximum possible
|
|
// range that a container can store, so instead of calculating a
|
|
// union we can generate an RLE container that represents the entire
|
|
// range.
|
|
tContainer = NewContainerRun([]interval16{{start: 0, last: maxContainerVal}})
|
|
target.Containers.Put(iKey, tContainer)
|
|
bitmapIters.markItersWithKeyAsHandled(i, iKey)
|
|
continue
|
|
}
|
|
expectedN += summaryStats.n
|
|
var itersToUnion handledIters
|
|
// Overview: We know that we have at least one "other" container
|
|
// to union in, and we may have a target container already. We want
|
|
// to shortcut easy cases ("no target container, exactly one
|
|
// other container").
|
|
if tContainer == nil {
|
|
// No existing target container.
|
|
if summaryStats.c == 1 {
|
|
// There's no target and we have only one container, we
|
|
// can just clone it instead of unioning.
|
|
statsHit("unionInPlace/reuse")
|
|
target.Containers.Put(iKey, iContainer.Clone())
|
|
bitmapIters[i].handled = true
|
|
continue
|
|
}
|
|
// We have at least two other containers. We can union
|
|
// everything together. We can union everything but
|
|
// the first other container into a clone of the
|
|
// first other container, but for some cases, that will
|
|
// result in cloning a non-bitmap, then converting it
|
|
// to a bitmap, and this will be expensive...
|
|
if expectedN >= 512 && iContainer.typ != containerBitmap {
|
|
// copying the non-bitmap, then converting it,
|
|
// is expensive.
|
|
statsHit("unionInPlace/newBitmap")
|
|
tContainer = NewContainerBitmap(0, nil)
|
|
itersToUnion = bitmapIters[i:]
|
|
} else {
|
|
// either N will be small or iContainer is a
|
|
// bitmap, so we can skip one union op by copying it.
|
|
statsHit("unionInPlace/clone")
|
|
tContainer = iContainer.Clone()
|
|
itersToUnion = bitmapIters[i+1:]
|
|
}
|
|
} else {
|
|
// we have an existing target container. If we're
|
|
// going to end up wanting it to be a bitmap, we
|
|
// convert it preemptively, because union into a
|
|
// bitmap is nearly always faster.
|
|
itersToUnion = bitmapIters[i:]
|
|
if expectedN >= 512 && tContainer.typ != containerBitmap {
|
|
statsHit("unionInPlace/convertToBitmap")
|
|
switch tContainer.typ {
|
|
case containerArray:
|
|
tContainer.arrayToBitmap()
|
|
case containerRun:
|
|
tContainer.runToBitmap()
|
|
}
|
|
}
|
|
}
|
|
|
|
// Now we union all remaining containers with this key
|
|
// together.
|
|
for j, iter := range itersToUnion {
|
|
jKey, jContainer := iter.iter.Value()
|
|
|
|
if iKey == jKey {
|
|
tContainer.unionInPlace(jContainer)
|
|
// "iter" is a local copy from the range
|
|
// loop, not the actual slice member.
|
|
itersToUnion[j].handled = true
|
|
}
|
|
}
|
|
|
|
// Now that we've calculated a container that is a union of all the containers
|
|
// with the same key across all the bitmaps, we store it in the list of containers
|
|
// for the target.
|
|
target.Containers.Put(iKey, tContainer)
|
|
}
|
|
|
|
hasNext = bitmapIters.next()
|
|
}
|
|
|
|
// Performing the popcount() operation with every union is wasteful because
|
|
// its likely the value will be invalidated by the next union operation. As
|
|
// a result, when we're performing all of our in-place unions we allow the value of
|
|
// n (container cardinality) to fall out of sync, and then at the very end we perform
|
|
// a "Repair" to recalculate all the container values. That way we never popcount()
|
|
// an entire bitmap container more than once per bulk union operation.
|
|
target.Containers.Repair()
|
|
}
|
|
|
|
// Difference returns the difference of b and other.
|
|
func (b *Bitmap) Difference(other *Bitmap) *Bitmap {
|
|
output := NewBitmap()
|
|
|
|
iiter, _ := b.Containers.Iterator(0)
|
|
jiter, _ := other.Containers.Iterator(0)
|
|
i, j := iiter.Next(), jiter.Next()
|
|
ki, ci := iiter.Value()
|
|
kj, cj := jiter.Value()
|
|
for i || j {
|
|
if i && (!j || ki < kj) {
|
|
output.Containers.Put(ki, ci.Clone())
|
|
i = iiter.Next()
|
|
ki, ci = iiter.Value()
|
|
} else if j && (!i || ki > kj) {
|
|
j = jiter.Next()
|
|
kj, cj = jiter.Value()
|
|
} else { // ki == kj
|
|
output.Containers.Put(ki, difference(ci, cj))
|
|
i, j = iiter.Next(), jiter.Next()
|
|
ki, ci = iiter.Value()
|
|
kj, cj = jiter.Value()
|
|
}
|
|
}
|
|
return output
|
|
}
|
|
|
|
// Xor returns the bitwise exclusive or of b and other.
|
|
func (b *Bitmap) Xor(other *Bitmap) *Bitmap {
|
|
output := NewBitmap()
|
|
|
|
iiter, _ := b.Containers.Iterator(0)
|
|
jiter, _ := other.Containers.Iterator(0)
|
|
i, j := iiter.Next(), jiter.Next()
|
|
ki, ci := iiter.Value()
|
|
kj, cj := jiter.Value()
|
|
for i || j {
|
|
if i && (!j || ki < kj) {
|
|
output.Containers.Put(ki, ci.Clone())
|
|
i = iiter.Next()
|
|
ki, ci = iiter.Value()
|
|
} else if j && (!i || ki > kj) {
|
|
output.Containers.Put(kj, cj.Clone())
|
|
j = jiter.Next()
|
|
kj, cj = jiter.Value()
|
|
} else { // ki == kj
|
|
output.Containers.Put(ki, xor(ci, cj))
|
|
i, j = iiter.Next(), jiter.Next()
|
|
ki, ci = iiter.Value()
|
|
kj, cj = jiter.Value()
|
|
}
|
|
}
|
|
return output
|
|
}
|
|
|
|
// Shift shifts the contents of b by 1.
|
|
func (b *Bitmap) Shift(n int) (*Bitmap, error) {
|
|
if n != 1 {
|
|
return nil, errors.New("cannot shift by a value other than 1")
|
|
}
|
|
output := NewBitmap()
|
|
iiter, _ := b.Containers.Iterator(0)
|
|
lastCarry := false
|
|
lastKey := uint64(0)
|
|
for iiter.Next() {
|
|
ki, ci := iiter.Value()
|
|
o, carry := shift(ci)
|
|
if lastCarry {
|
|
o.add(0)
|
|
}
|
|
if o.n > 0 {
|
|
output.Containers.Put(ki, o)
|
|
}
|
|
lastCarry = carry
|
|
lastKey = ki
|
|
}
|
|
// As long as the carry wasn't from the max container,
|
|
// append a new container and add the carried bit.
|
|
if lastCarry && lastKey != maxContainerKey {
|
|
extra := NewContainerArray([]uint16{0})
|
|
output.Containers.Put(lastKey+1, extra)
|
|
}
|
|
|
|
return output, nil
|
|
}
|
|
|
|
// removeEmptyContainers deletes all containers that have a count of zero.
|
|
func (b *Bitmap) removeEmptyContainers() {
|
|
citer, _ := b.Containers.Iterator(0)
|
|
for citer.Next() {
|
|
k, c := citer.Value()
|
|
if c.n == 0 {
|
|
b.Containers.Remove(k)
|
|
}
|
|
}
|
|
}
|
|
func (b *Bitmap) countEmptyContainers() int {
|
|
result := 0
|
|
citer, _ := b.Containers.Iterator(0)
|
|
for citer.Next() {
|
|
_, c := citer.Value()
|
|
if c.n == 0 {
|
|
result++
|
|
}
|
|
}
|
|
return result
|
|
}
|
|
|
|
// Optimize converts array and bitmap containers to run containers as necessary.
|
|
func (b *Bitmap) Optimize() {
|
|
citer, _ := b.Containers.Iterator(0)
|
|
for citer.Next() {
|
|
_, c := citer.Value()
|
|
c.optimize()
|
|
}
|
|
}
|
|
|
|
type errWriter struct {
|
|
w io.Writer
|
|
err error
|
|
n int
|
|
}
|
|
|
|
func (ew *errWriter) WriteUint16(b []byte, v uint16) {
|
|
if ew.err != nil {
|
|
return
|
|
}
|
|
var n int
|
|
binary.LittleEndian.PutUint16(b, v)
|
|
n, ew.err = ew.w.Write(b)
|
|
ew.n += n
|
|
}
|
|
func (ew *errWriter) WriteUint32(b []byte, v uint32) {
|
|
if ew.err != nil {
|
|
return
|
|
}
|
|
var n int
|
|
binary.LittleEndian.PutUint32(b, v)
|
|
n, ew.err = ew.w.Write(b)
|
|
ew.n += n
|
|
}
|
|
|
|
func (ew *errWriter) WriteUint64(b []byte, v uint64) {
|
|
if ew.err != nil {
|
|
return
|
|
}
|
|
var n int
|
|
binary.LittleEndian.PutUint64(b, v)
|
|
n, ew.err = ew.w.Write(b)
|
|
ew.n += n
|
|
}
|
|
|
|
// WriteTo writes b to w.
|
|
func (b *Bitmap) WriteTo(w io.Writer) (n int64, err error) {
|
|
b.Optimize()
|
|
return b.writeToUnoptimized(w)
|
|
}
|
|
|
|
// writeToUnoptimized is a WriteTo without the Optimize path. We need
|
|
// this because otherwise we can't do some of our marshal/unmarshal tests
|
|
// safely.
|
|
func (b *Bitmap) writeToUnoptimized(w io.Writer) (n int64, err error) {
|
|
// Remove empty containers before persisting.
|
|
//b.removeEmptyContainers()
|
|
|
|
containerCount := b.Containers.Size() - b.countEmptyContainers()
|
|
headerSize := headerBaseSize
|
|
byte2 := make([]byte, 2)
|
|
byte4 := make([]byte, 4)
|
|
byte8 := make([]byte, 8)
|
|
|
|
// Build header before writing individual container blocks.
|
|
// Metadata for each container is 8+2+2+4 = sizeof(key) + sizeof(type)+sizeof(cardinality) + sizeof(file offset)
|
|
// Type is stored as 2 bytes, even though it's only got values 1..3.
|
|
// Cookie header section.
|
|
ew := &errWriter{
|
|
w: w,
|
|
n: 0,
|
|
}
|
|
|
|
ew.WriteUint32(byte4, cookie)
|
|
ew.WriteUint32(byte4, uint32(containerCount))
|
|
|
|
// Descriptive header section: encode keys and cardinality.
|
|
// Key and cardinality are stored interleaved here, 12 bytes per container.
|
|
citer, _ := b.Containers.Iterator(0)
|
|
for citer.Next() {
|
|
key, c := citer.Value()
|
|
// Verify container count before writing.
|
|
// TODO: instead of commenting this out, we need to make it a configuration option
|
|
//count := c.count()
|
|
//assert(c.count() == c.n, "cannot write container count, mismatch: count=%d, n=%d", count, c.n)
|
|
if c.n > 0 {
|
|
ew.WriteUint64(byte8, key)
|
|
ew.WriteUint16(byte2, uint16(c.typ))
|
|
ew.WriteUint16(byte2, uint16(c.n-1))
|
|
}
|
|
|
|
}
|
|
|
|
// Offset header section: write the offset for each container block.
|
|
// 4 bytes per container.
|
|
offset := uint32(headerSize + (containerCount * (8 + 2 + 2 + 4)))
|
|
citer, _ = b.Containers.Iterator(0)
|
|
for citer.Next() {
|
|
_, c := citer.Value()
|
|
if c.n > 0 {
|
|
ew.WriteUint32(byte4, offset)
|
|
offset += uint32(c.size())
|
|
}
|
|
|
|
}
|
|
if ew.err != nil {
|
|
return int64(ew.n), ew.err
|
|
}
|
|
|
|
n = int64(headerSize + (containerCount * (8 + 2 + 2 + 4)))
|
|
|
|
// Container storage section: write each container block.
|
|
citer, _ = b.Containers.Iterator(0)
|
|
for citer.Next() {
|
|
_, c := citer.Value()
|
|
if c.n > 0 {
|
|
nn, err := c.WriteTo(w)
|
|
n += nn
|
|
if err != nil {
|
|
return n, err
|
|
}
|
|
}
|
|
}
|
|
return n, nil
|
|
}
|
|
|
|
// unmarshalPilosaRoaring treats data as being encoded in Pilosa's 64 bit
|
|
// roaring format and decodes it into b.
|
|
func (b *Bitmap) unmarshalPilosaRoaring(data []byte) error {
|
|
if len(data) < headerBaseSize {
|
|
return errors.New("data too small")
|
|
}
|
|
|
|
// Verify the first two bytes are a valid MagicNumber, and second two bytes match current storageVersion.
|
|
fileMagic := uint32(binary.LittleEndian.Uint16(data[0:2]))
|
|
fileVersion := uint32(binary.LittleEndian.Uint16(data[2:4]))
|
|
if fileMagic != MagicNumber {
|
|
return fmt.Errorf("invalid roaring file, magic number %v is incorrect", fileMagic)
|
|
}
|
|
|
|
if fileVersion != storageVersion {
|
|
return fmt.Errorf("wrong roaring version, file is v%d, server requires v%d", fileVersion, storageVersion)
|
|
}
|
|
|
|
// Read key count in bytes sizeof(cookie):(sizeof(cookie)+sizeof(uint32)).
|
|
keyN := binary.LittleEndian.Uint32(data[4:8])
|
|
|
|
headerSize := headerBaseSize
|
|
b.Containers.Reset()
|
|
// Descriptive header section: Read container keys and cardinalities.
|
|
for i, buf := 0, data[headerSize:]; i < int(keyN); i, buf = i+1, buf[12:] {
|
|
b.Containers.PutContainerValues(
|
|
binary.LittleEndian.Uint64(buf[0:8]),
|
|
byte(binary.LittleEndian.Uint16(buf[8:10])),
|
|
int(binary.LittleEndian.Uint16(buf[10:12]))+1,
|
|
true)
|
|
}
|
|
opsOffset := headerSize + int(keyN)*12
|
|
|
|
// Read container offsets and attach data.
|
|
citer, _ := b.Containers.Iterator(0)
|
|
for i, buf := 0, data[opsOffset:]; i < int(keyN); i, buf = i+1, buf[4:] {
|
|
offset := binary.LittleEndian.Uint32(buf[0:4])
|
|
// Verify the offset is within the bounds of the input data.
|
|
if int(offset) >= len(data) {
|
|
return fmt.Errorf("offset out of bounds: off=%d, len=%d", offset, len(data))
|
|
}
|
|
|
|
// Map byte slice directly to the container data.
|
|
citer.Next()
|
|
_, c := citer.Value()
|
|
switch c.typ {
|
|
case containerRun:
|
|
runCount := binary.LittleEndian.Uint16(data[offset : offset+runCountHeaderSize])
|
|
c.setRuns((*[0xFFFFFFF]interval16)(unsafe.Pointer(&data[offset+runCountHeaderSize]))[:runCount:runCount])
|
|
opsOffset = int(offset) + runCountHeaderSize + len(c.runs())*interval16Size
|
|
case containerArray:
|
|
c.setArray((*[0xFFFFFFF]uint16)(unsafe.Pointer(&data[offset]))[:c.n:c.n])
|
|
opsOffset = int(offset) + len(c.array())*2 // sizeof(uint32)
|
|
case containerBitmap:
|
|
c.setBitmap((*[0xFFFFFFF]uint64)(unsafe.Pointer(&data[offset]))[:bitmapN:bitmapN])
|
|
opsOffset = int(offset) + len(c.bitmap())*8 // sizeof(uint64)
|
|
}
|
|
}
|
|
|
|
// Read ops log until the end of the file.
|
|
buf := data[opsOffset:]
|
|
for {
|
|
// Exit when there are no more ops to parse.
|
|
if len(buf) == 0 {
|
|
break
|
|
}
|
|
|
|
// Unmarshal the op and apply it.
|
|
var opr op
|
|
if err := opr.UnmarshalBinary(buf); err != nil {
|
|
// FIXME(benbjohnson): return error with position so file can be trimmed.
|
|
return err
|
|
}
|
|
|
|
opr.apply(b)
|
|
|
|
// Increase the op count.
|
|
b.opN += opr.count()
|
|
|
|
// Move the buffer forward.
|
|
buf = buf[opr.size():]
|
|
}
|
|
|
|
return nil
|
|
}
|
|
|
|
// writeOp writes op to the OpWriter, if available.
|
|
func (b *Bitmap) writeOp(op *op) error {
|
|
if b.OpWriter == nil {
|
|
return nil
|
|
}
|
|
|
|
if _, err := op.WriteTo(b.OpWriter); err != nil {
|
|
return err
|
|
}
|
|
b.opN += op.count()
|
|
|
|
return nil
|
|
}
|
|
|
|
// Iterator returns a new iterator for the bitmap.
|
|
func (b *Bitmap) Iterator() *Iterator {
|
|
itr := &Iterator{bitmap: b}
|
|
itr.Seek(0)
|
|
return itr
|
|
}
|
|
|
|
// Info returns stats for the bitmap.
|
|
func (b *Bitmap) Info() bitmapInfo {
|
|
info := bitmapInfo{
|
|
OpN: b.opN,
|
|
Containers: make([]containerInfo, 0, b.Containers.Size()),
|
|
}
|
|
|
|
citer, _ := b.Containers.Iterator(0)
|
|
for citer.Next() {
|
|
k, c := citer.Value()
|
|
ci := c.info()
|
|
ci.Key = k
|
|
info.Containers = append(info.Containers, ci)
|
|
}
|
|
return info
|
|
}
|
|
|
|
// Check performs a consistency check on the bitmap. Returns nil if consistent.
|
|
func (b *Bitmap) Check() error {
|
|
var a ErrorList
|
|
|
|
// Check each container.
|
|
citer, _ := b.Containers.Iterator(0)
|
|
for citer.Next() {
|
|
k, c := citer.Value()
|
|
if err := c.check(); err != nil {
|
|
a.AppendWithPrefix(err, fmt.Sprintf("%d/", k))
|
|
}
|
|
}
|
|
|
|
if len(a) == 0 {
|
|
return nil
|
|
}
|
|
return a
|
|
}
|
|
|
|
// Flip performs a logical negate of the bits in the range [start,end].
|
|
func (b *Bitmap) Flip(start, end uint64) *Bitmap {
|
|
result := NewBitmap()
|
|
itr := b.Iterator()
|
|
v, eof := itr.Next()
|
|
//copy over previous bits.
|
|
for v < start && !eof {
|
|
result.DirectAdd(v)
|
|
v, eof = itr.Next()
|
|
}
|
|
//flip bits in range .
|
|
for i := start; i <= end; i++ {
|
|
if eof {
|
|
result.DirectAdd(i)
|
|
} else if v == i {
|
|
v, eof = itr.Next()
|
|
} else {
|
|
result.DirectAdd(i)
|
|
}
|
|
}
|
|
//add remaining.
|
|
for !eof {
|
|
result.DirectAdd(v)
|
|
v, eof = itr.Next()
|
|
}
|
|
return result
|
|
}
|
|
|
|
// bitmapInfo represents a point-in-time snapshot of bitmap stats.
|
|
type bitmapInfo struct {
|
|
OpN int
|
|
Containers []containerInfo
|
|
}
|
|
|
|
// Iterator represents an iterator over a Bitmap.
|
|
type Iterator struct {
|
|
bitmap *Bitmap
|
|
citer ContainerIterator
|
|
key uint64
|
|
c *Container
|
|
j, k int32 // i: container; j: array index, bit index, or run index; k: offset within the run
|
|
}
|
|
|
|
// Seek moves to the first value equal to or greater than `seek`.
|
|
func (itr *Iterator) Seek(seek uint64) {
|
|
// k should always be -1 unless we're seeking into a run container. Then the
|
|
// "if c.isRun" section will take care of it.
|
|
itr.k = -1
|
|
|
|
// Move to the correct container.
|
|
itr.citer, _ = itr.bitmap.Containers.Iterator(highbits(seek))
|
|
if !itr.citer.Next() {
|
|
itr.c = nil
|
|
return // eof
|
|
}
|
|
itr.key, itr.c = itr.citer.Value()
|
|
|
|
// Move to the correct value index inside the container.
|
|
lb := lowbits(seek)
|
|
if itr.c.isArray() {
|
|
// Find index in the container.
|
|
itr.j = search32(itr.c.array(), lb)
|
|
if itr.j < 0 {
|
|
itr.j = -itr.j - 1
|
|
}
|
|
if itr.j < int32(len(itr.c.array())) {
|
|
itr.j--
|
|
return
|
|
}
|
|
|
|
// If it's at the end of the container then move to the next one.
|
|
if !itr.citer.Next() {
|
|
itr.c = nil
|
|
return
|
|
}
|
|
itr.key, itr.c = itr.citer.Value()
|
|
itr.j = -1
|
|
return
|
|
}
|
|
|
|
if itr.c.isRun() {
|
|
if seek == 0 {
|
|
itr.j, itr.k = 0, -1
|
|
}
|
|
|
|
j, contains := binSearchRuns(lb, itr.c.runs())
|
|
if contains {
|
|
itr.j = j
|
|
itr.k = int32(lb) - int32(itr.c.runs()[j].start) - 1
|
|
} else {
|
|
// Set iterator to next value in the Bitmap.
|
|
itr.j = j
|
|
itr.k = -1
|
|
}
|
|
|
|
return
|
|
}
|
|
|
|
// If it's a bitmap container then move to index before the value and call next().
|
|
itr.j = int32(lb) - 1
|
|
}
|
|
|
|
// Next returns the next value in the bitmap.
|
|
// Returns eof as true if there are no values left in the iterator.
|
|
func (itr *Iterator) Next() (v uint64, eof bool) {
|
|
if itr.c == nil {
|
|
return 0, true
|
|
}
|
|
// Iterate over containers until we find the next value or EOF.
|
|
for {
|
|
if itr.c.isArray() {
|
|
if itr.j >= itr.c.n-1 {
|
|
// Reached end of array, move to the next container.
|
|
if !itr.citer.Next() {
|
|
itr.c = nil
|
|
return 0, true
|
|
}
|
|
itr.key, itr.c = itr.citer.Value()
|
|
itr.j = -1
|
|
continue
|
|
}
|
|
itr.j++
|
|
return itr.peek(), false
|
|
}
|
|
|
|
if itr.c.isRun() {
|
|
// Because itr.j for an array container defaults to -1
|
|
// but defaults to 0 for a run container, we need to
|
|
// standardize on treating -1 as our default value for itr.j.
|
|
// Note that this is easier than changing the default to 0
|
|
// because the array logic uses the negative number space
|
|
// to represent offsets to an array position that isn't filled
|
|
// (-1 being the first empty space in an array, or 0).
|
|
if itr.j == -1 {
|
|
itr.j++
|
|
}
|
|
|
|
// If the container is empty, move to the next container.
|
|
if len(itr.c.runs()) == 0 {
|
|
if !itr.citer.Next() {
|
|
itr.c = nil
|
|
return 0, true
|
|
}
|
|
itr.key, itr.c = itr.citer.Value()
|
|
itr.j = -1
|
|
continue
|
|
}
|
|
|
|
r := itr.c.runs()[itr.j]
|
|
runLength := int32(r.last - r.start)
|
|
|
|
if itr.k >= runLength {
|
|
// Reached end of run, move to the next run.
|
|
itr.j, itr.k = itr.j+1, -1
|
|
}
|
|
|
|
if itr.j >= int32(len(itr.c.runs())) {
|
|
// Reached end of runs, move to the next container.
|
|
if !itr.citer.Next() {
|
|
itr.c = nil
|
|
return 0, true
|
|
}
|
|
itr.key, itr.c = itr.citer.Value()
|
|
itr.j = -1
|
|
continue
|
|
}
|
|
|
|
itr.k++
|
|
return itr.peek(), false
|
|
}
|
|
|
|
// Move to the next possible index in the bitmap container.
|
|
itr.j++
|
|
|
|
// Find first non-zero bit in current bitmap, if possible.
|
|
hb := itr.j >> 6
|
|
|
|
if hb >= int32(len(itr.c.bitmap())) {
|
|
if !itr.citer.Next() {
|
|
itr.c = nil
|
|
return 0, true
|
|
}
|
|
itr.key, itr.c = itr.citer.Value()
|
|
itr.j = -1
|
|
continue
|
|
}
|
|
lb := itr.c.bitmap()[hb] >> (uint(itr.j) % 64)
|
|
if lb != 0 {
|
|
itr.j = itr.j + int32(trailingZeroN(lb))
|
|
return itr.peek(), false
|
|
}
|
|
|
|
// Otherwise iterate through remaining bitmaps to find next bit.
|
|
for hb++; hb < int32(len(itr.c.bitmap())); hb++ {
|
|
if itr.c.bitmap()[hb] != 0 {
|
|
itr.j = hb<<6 + int32(trailingZeroN(itr.c.bitmap()[hb]))
|
|
return itr.peek(), false
|
|
}
|
|
}
|
|
|
|
// If no bits found then move to the next container.
|
|
if !itr.citer.Next() {
|
|
itr.c = nil
|
|
return 0, true
|
|
}
|
|
itr.key, itr.c = itr.citer.Value()
|
|
itr.j = -1
|
|
}
|
|
}
|
|
|
|
// peek returns the current value.
|
|
func (itr *Iterator) peek() uint64 {
|
|
if itr.c == nil {
|
|
return 0
|
|
}
|
|
if itr.c.isArray() {
|
|
return itr.key<<16 | uint64(itr.c.array()[itr.j])
|
|
}
|
|
if itr.c.isRun() {
|
|
return itr.key<<16 | uint64(itr.c.runs()[itr.j].start+uint16(itr.k))
|
|
}
|
|
return itr.key<<16 | uint64(itr.j)
|
|
}
|
|
|
|
// ArrayMaxSize represents the maximum size of array containers.
|
|
const ArrayMaxSize = 4096
|
|
|
|
// runMaxSize represents the maximum size of run length encoded containers.
|
|
const runMaxSize = 2048
|
|
|
|
type interval16 struct {
|
|
start uint16
|
|
last uint16
|
|
}
|
|
|
|
// runlen returns the count of integers in the interval.
|
|
func (iv interval16) runlen() int32 {
|
|
return 1 + int32(iv.last-iv.start)
|
|
}
|
|
|
|
// count counts all bits in the container.
|
|
func (c *Container) count() (n int32) {
|
|
return c.countRange(0, maxContainerVal+1)
|
|
}
|
|
|
|
// countRange counts the number of bits set between [start, end).
|
|
func (c *Container) countRange(start, end int32) (n int32) {
|
|
if c.isArray() {
|
|
return c.arrayCountRange(start, end)
|
|
} else if c.isRun() {
|
|
return c.runCountRange(start, end)
|
|
}
|
|
return c.bitmapCountRange(start, end)
|
|
}
|
|
|
|
func (c *Container) arrayCountRange(start, end int32) (n int32) {
|
|
array := c.array()
|
|
i := int32(sort.Search(len(array), func(i int) bool { return int32(array[i]) >= start }))
|
|
for ; i < int32(len(array)); i++ {
|
|
v := int32(array[i])
|
|
if v >= end {
|
|
break
|
|
}
|
|
n++
|
|
}
|
|
return n
|
|
}
|
|
|
|
func (c *Container) bitmapCountRange(start, end int32) int32 {
|
|
var n uint64
|
|
i, j := start/64, end/64
|
|
// Special case when start and end fall in the same word.
|
|
bitmap := c.bitmap()
|
|
if i == j {
|
|
offi, offj := uint(start%64), uint(64-end%64)
|
|
n += popcount((bitmap[i] >> offi) << (offj + offi))
|
|
return int32(n)
|
|
}
|
|
|
|
// Count partial starting word.
|
|
if off := uint(start) % 64; off != 0 {
|
|
n += popcount(bitmap[i] >> off)
|
|
i++
|
|
}
|
|
|
|
// Count words in between.
|
|
for ; i < j; i++ {
|
|
n += popcount(bitmap[i])
|
|
}
|
|
|
|
// Count partial ending word.
|
|
if j < int32(len(bitmap)) {
|
|
off := 64 - (uint(end) % 64)
|
|
n += popcount(bitmap[j] << off)
|
|
}
|
|
|
|
return int32(n)
|
|
}
|
|
|
|
func (c *Container) runCountRange(start, end int32) (n int32) {
|
|
runs := c.runs()
|
|
for _, iv := range runs {
|
|
// iv is before range
|
|
if int32(iv.last) < start {
|
|
continue
|
|
}
|
|
// iv is after range
|
|
if end < int32(iv.start) {
|
|
break
|
|
}
|
|
// iv is superset of range
|
|
if int32(iv.start) < start && int32(iv.last) > end {
|
|
return end - start
|
|
}
|
|
// iv is subset of range
|
|
if int32(iv.start) >= start && int32(iv.last) < end {
|
|
n += iv.runlen()
|
|
}
|
|
// iv overlaps beginning of range
|
|
if int32(iv.start) < start && int32(iv.last) < end {
|
|
n += int32(iv.last) - start + 1
|
|
}
|
|
// iv overlaps end of range
|
|
if int32(iv.start) > start && int32(iv.last) >= end {
|
|
n += end - int32(iv.start)
|
|
}
|
|
}
|
|
return n
|
|
}
|
|
|
|
// add adds a value to the container.
|
|
func (c *Container) add(v uint16) (added bool) {
|
|
|
|
if c.isArray() {
|
|
added = c.arrayAdd(v)
|
|
} else if c.isRun() {
|
|
added = c.runAdd(v)
|
|
} else {
|
|
added = c.bitmapAdd(v)
|
|
}
|
|
if added {
|
|
c.n++
|
|
}
|
|
return added
|
|
}
|
|
|
|
func (c *Container) arrayAdd(v uint16) bool {
|
|
// Optimize appending to the end of an array container.
|
|
array := c.array()
|
|
if c.n > 0 && c.n < ArrayMaxSize && c.isArray() && array[c.n-1] < v {
|
|
statsHit("arrayAdd/append")
|
|
c.unmapArray()
|
|
array = append(c.array(), v)
|
|
c.setArray(array)
|
|
return true
|
|
}
|
|
|
|
// Find index of the integer in the container. Exit if it already exists.
|
|
i := search32(array, v)
|
|
if i >= 0 {
|
|
return false
|
|
}
|
|
|
|
// Convert to a bitmap container if too many values are in an array container.
|
|
if c.n >= ArrayMaxSize {
|
|
statsHit("arrayAdd/arrayToBitmap")
|
|
c.arrayToBitmap()
|
|
return c.bitmapAdd(v)
|
|
}
|
|
|
|
// Otherwise insert into array.
|
|
statsHit("arrayAdd/insert")
|
|
c.unmapArray()
|
|
i = -i - 1
|
|
array = append(c.array(), 0)
|
|
copy(array[i+1:], array[i:])
|
|
array[i] = v
|
|
c.setArray(array)
|
|
return true
|
|
|
|
}
|
|
|
|
func (c *Container) bitmapAdd(v uint16) bool {
|
|
if c.bitmapContains(v) {
|
|
return false
|
|
}
|
|
c.unmapBitmap()
|
|
c.bitmap()[v/64] |= (1 << uint64(v%64))
|
|
return true
|
|
}
|
|
|
|
func (c *Container) runAdd(v uint16) bool {
|
|
runs := c.runs()
|
|
|
|
if len(runs) == 0 {
|
|
c.unmapRun()
|
|
c.setRuns([]interval16{{start: v, last: v}})
|
|
return true
|
|
}
|
|
|
|
i := sort.Search(len(runs),
|
|
func(i int) bool { return runs[i].last >= v })
|
|
|
|
if i == len(runs) {
|
|
i--
|
|
}
|
|
|
|
iv := runs[i]
|
|
if v >= iv.start && iv.last >= v {
|
|
return false
|
|
}
|
|
|
|
c.unmapRun()
|
|
runs = c.runs()
|
|
if iv.last < v {
|
|
if iv.last == v-1 {
|
|
runs[i].last++
|
|
} else {
|
|
runs = append(runs, interval16{start: v, last: v})
|
|
}
|
|
} else if v+1 == iv.start {
|
|
// combining two intervals
|
|
if i > 0 && runs[i-1].last == v-1 {
|
|
runs[i-1].last = iv.last
|
|
runs = append(runs[:i], runs[i+1:]...)
|
|
c.setRuns(runs)
|
|
return true
|
|
}
|
|
// just before an interval
|
|
runs[i].start--
|
|
} else if i > 0 && v-1 == runs[i-1].last {
|
|
// just after an interval
|
|
runs[i-1].last++
|
|
} else {
|
|
// alone
|
|
newIv := interval16{start: v, last: v}
|
|
runs = append(runs[:i], append([]interval16{newIv}, runs[i:]...)...)
|
|
}
|
|
c.setRuns(runs)
|
|
return true
|
|
}
|
|
|
|
// Contains returns true if v is in the container.
|
|
func (c *Container) Contains(v uint16) bool {
|
|
if c.isArray() {
|
|
return c.arrayContains(v)
|
|
} else if c.isRun() {
|
|
return c.runContains(v)
|
|
} else {
|
|
return c.bitmapContains(v)
|
|
}
|
|
}
|
|
|
|
func (c *Container) bitmapCountRuns() (r int32) {
|
|
return bitmapCountRuns(c.bitmap())
|
|
}
|
|
|
|
func bitmapCountRuns(bitmap []uint64) (r int32) {
|
|
for i := 0; i < 1023; i++ {
|
|
v, v1 := bitmap[i], bitmap[i+1]
|
|
r = r + int32(popcount((v<<1)&^v)+((v>>63)&^v1))
|
|
}
|
|
vl := bitmap[len(bitmap)-1]
|
|
r = r + int32(popcount((vl<<1)&^vl)+vl>>63)
|
|
return r
|
|
}
|
|
|
|
func arrayCountRuns(array []uint16) (r int32) {
|
|
prev := int32(-2)
|
|
for _, v := range array {
|
|
if prev+1 != int32(v) {
|
|
r++
|
|
}
|
|
prev = int32(v)
|
|
}
|
|
return r
|
|
}
|
|
|
|
func (c *Container) arrayCountRuns() (r int32) {
|
|
return arrayCountRuns(c.array())
|
|
}
|
|
|
|
func (c *Container) countRuns() (r int32) {
|
|
if c.isArray() {
|
|
return c.arrayCountRuns()
|
|
} else if c.isBitmap() {
|
|
return c.bitmapCountRuns()
|
|
} else if c.isRun() {
|
|
return int32(len(c.runs()))
|
|
}
|
|
|
|
// sure hope this never happens
|
|
return 0
|
|
}
|
|
|
|
// optimize converts the container to the type which will take up the least
|
|
// amount of space.
|
|
func (c *Container) optimize() {
|
|
if c.n == 0 {
|
|
statsHit("optimize/empty")
|
|
return
|
|
}
|
|
runs := c.countRuns()
|
|
|
|
var newType byte
|
|
if runs <= runMaxSize && runs <= c.n/2 {
|
|
newType = containerRun
|
|
} else if c.n < ArrayMaxSize {
|
|
newType = containerArray
|
|
} else {
|
|
newType = containerBitmap
|
|
}
|
|
|
|
// Then convert accordingly.
|
|
if c.isArray() {
|
|
if newType == containerBitmap {
|
|
statsHit("optimize/arrayToBitmap")
|
|
c.arrayToBitmap()
|
|
} else if newType == containerRun {
|
|
statsHit("optimize/arrayToRun")
|
|
c.arrayToRun(runs)
|
|
} else {
|
|
statsHit("optimize/arrayUnchanged")
|
|
}
|
|
} else if c.isBitmap() {
|
|
if newType == containerArray {
|
|
statsHit("optimize/bitmapToArray")
|
|
c.bitmapToArray()
|
|
} else if newType == containerRun {
|
|
statsHit("optimize/bitmapToRun")
|
|
c.bitmapToRun(runs)
|
|
} else {
|
|
statsHit("optimize/bitmapUnchanged")
|
|
}
|
|
} else if c.isRun() {
|
|
if newType == containerBitmap {
|
|
statsHit("optimize/runToBitmap")
|
|
c.runToBitmap()
|
|
} else if newType == containerArray {
|
|
statsHit("optimize/runToArray")
|
|
c.runToArray()
|
|
} else {
|
|
statsHit("optimize/runUnchanged")
|
|
}
|
|
}
|
|
}
|
|
|
|
// unionInPlace does not necessarily preserve container's N; it's expected
|
|
// to be used when running a sequence of unions, after which you should
|
|
// call Repair(). (As of this writing, that only matters for bitmaps.)
|
|
func (c *Container) unionInPlace(other *Container) {
|
|
switch c.typ {
|
|
case containerBitmap:
|
|
switch other.typ {
|
|
case containerBitmap:
|
|
unionBitmapBitmapInPlace(c, other)
|
|
case containerArray:
|
|
unionBitmapArrayInPlace(c, other)
|
|
case containerRun:
|
|
unionBitmapRunInPlace(c, other)
|
|
|
|
}
|
|
case containerArray:
|
|
switch other.typ {
|
|
case containerBitmap:
|
|
c.arrayToBitmap()
|
|
unionBitmapBitmapInPlace(c, other)
|
|
case containerArray:
|
|
unionArrayArrayInPlace(c, other)
|
|
case containerRun:
|
|
c.arrayToBitmap()
|
|
unionBitmapRunInPlace(c, other)
|
|
}
|
|
case containerRun:
|
|
switch other.typ {
|
|
case containerBitmap:
|
|
c.runToBitmap()
|
|
unionBitmapBitmapInPlace(c, other)
|
|
case containerArray:
|
|
c.runToBitmap()
|
|
unionBitmapArrayInPlace(c, other)
|
|
case containerRun:
|
|
c.runToBitmap()
|
|
unionBitmapRunInPlace(c, other)
|
|
}
|
|
}
|
|
}
|
|
|
|
func (c *Container) arrayContains(v uint16) bool {
|
|
return search32(c.array(), v) >= 0
|
|
}
|
|
|
|
func (c *Container) bitmapContains(v uint16) bool {
|
|
return (c.bitmap()[v/64] & (1 << uint64(v%64))) != 0
|
|
}
|
|
|
|
// binSearchRuns returns the index of the run containing v, and true, when v is contained;
|
|
// or the index of the next run starting after v, and false, when v is not contained.
|
|
func binSearchRuns(v uint16, a []interval16) (int32, bool) {
|
|
i := int32(sort.Search(len(a),
|
|
func(i int) bool { return a[i].last >= v }))
|
|
if i < int32(len(a)) {
|
|
return i, (v >= a[i].start) && (v <= a[i].last)
|
|
}
|
|
|
|
return i, false
|
|
}
|
|
|
|
// runContains determines if v is in the container assuming c is a run
|
|
// container.
|
|
func (c *Container) runContains(v uint16) bool {
|
|
_, found := binSearchRuns(v, c.runs())
|
|
return found
|
|
}
|
|
|
|
// remove removes a value from the container.
|
|
func (c *Container) remove(v uint16) (removed bool) {
|
|
if c.isArray() {
|
|
removed = c.arrayRemove(v)
|
|
} else if c.isRun() {
|
|
removed = c.runRemove(v)
|
|
} else {
|
|
removed = c.bitmapRemove(v)
|
|
}
|
|
return removed
|
|
}
|
|
|
|
func (c *Container) arrayRemove(v uint16) bool {
|
|
array := c.array()
|
|
i := search32(array, v)
|
|
if i < 0 {
|
|
return false
|
|
}
|
|
c.unmapArray()
|
|
array = c.array()
|
|
|
|
array = append(array[:i], array[i+1:]...)
|
|
c.n--
|
|
c.setArray(array)
|
|
return true
|
|
}
|
|
|
|
func (c *Container) bitmapRemove(v uint16) bool {
|
|
if !c.bitmapContains(v) {
|
|
return false
|
|
}
|
|
c.unmapBitmap()
|
|
|
|
// Lower count and remove element.
|
|
c.bitmap()[v/64] &^= (uint64(1) << uint(v%64))
|
|
c.n--
|
|
|
|
// Convert to array if we go below the threshold.
|
|
if c.n == ArrayMaxSize {
|
|
statsHit("bitmapRemove/bitmapToArray")
|
|
c.bitmapToArray()
|
|
}
|
|
return true
|
|
}
|
|
|
|
// runRemove removes v from a run container, and returns true if v was removed.
|
|
func (c *Container) runRemove(v uint16) bool {
|
|
runs := c.runs()
|
|
i, contains := binSearchRuns(v, runs)
|
|
if !contains {
|
|
return false
|
|
}
|
|
c.unmapRun()
|
|
runs = c.runs()
|
|
if v == runs[i].last && v == runs[i].start {
|
|
runs = append(runs[:i], runs[i+1:]...)
|
|
} else if v == runs[i].last {
|
|
runs[i].last--
|
|
} else if v == runs[i].start {
|
|
runs[i].start++
|
|
} else if v > runs[i].start {
|
|
last := runs[i].last
|
|
runs[i].last = v - 1
|
|
runs = append(runs, interval16{})
|
|
copy(runs[i+2:], runs[i+1:])
|
|
runs[i+1] = interval16{start: v + 1, last: last}
|
|
// runs = append(runs[:i+1], append([]interval16{{start: v + 1, last: last}}, runs[i+1:]...)...)
|
|
}
|
|
c.n--
|
|
c.setRuns(runs)
|
|
return true
|
|
}
|
|
|
|
// max returns the maximum value in the container.
|
|
func (c *Container) max() uint16 {
|
|
if c.isArray() {
|
|
return c.arrayMax()
|
|
} else if c.isRun() {
|
|
return c.runMax()
|
|
} else {
|
|
return c.bitmapMax()
|
|
}
|
|
}
|
|
|
|
func (c *Container) arrayMax() uint16 {
|
|
array := c.array()
|
|
if len(array) == 0 {
|
|
return 0 // probably hiding some ugly bug but it prevents a crash
|
|
}
|
|
return array[len(array)-1]
|
|
}
|
|
|
|
func (c *Container) bitmapMax() uint16 {
|
|
// Search bitmap in reverse order.
|
|
bitmap := c.bitmap()
|
|
for i := len(bitmap); i > 0; i-- {
|
|
// If value is zero then skip.
|
|
v := bitmap[i-1]
|
|
if v != 0 {
|
|
r := bits.LeadingZeros64(v)
|
|
return uint16((i-1)*64 + 63 - r)
|
|
}
|
|
|
|
}
|
|
return 0
|
|
}
|
|
|
|
func (c *Container) runMax() uint16 {
|
|
runs := c.runs()
|
|
if len(runs) == 0 {
|
|
return 0
|
|
}
|
|
return runs[len(runs)-1].last
|
|
}
|
|
|
|
// bitmapToArray converts from bitmap format to array format.
|
|
func (c *Container) bitmapToArray() {
|
|
statsHit("bitmapToArray")
|
|
bitmap := c.bitmap()
|
|
c.setBitmap(nil)
|
|
c.typ = containerArray
|
|
c.mapped = false
|
|
|
|
// return early if empty
|
|
if c.n == 0 {
|
|
c.setArray(nil)
|
|
return
|
|
}
|
|
n := int32(0)
|
|
|
|
array := make([]uint16, c.n)
|
|
for i, word := range bitmap {
|
|
for word != 0 {
|
|
t := word & -word
|
|
if roaringParanoia {
|
|
if n >= c.n {
|
|
panic("bitmap has more bits set than container.n")
|
|
}
|
|
}
|
|
array[n] = uint16((i*64 + int(popcount(t-1))))
|
|
n++
|
|
word ^= t
|
|
}
|
|
}
|
|
if roaringParanoia {
|
|
if n != c.n {
|
|
panic("bitmap has fewer bits set than container.n")
|
|
}
|
|
}
|
|
c.setArray(array)
|
|
}
|
|
|
|
// arrayToBitmap converts from array format to bitmap format.
|
|
func (c *Container) arrayToBitmap() {
|
|
statsHit("arrayToBitmap")
|
|
array := c.array()
|
|
c.typ = containerBitmap
|
|
bitmap := make([]uint64, bitmapN)
|
|
c.setBitmap(bitmap)
|
|
c.mapped = false
|
|
|
|
// return early if empty
|
|
if c.n == 0 {
|
|
return
|
|
}
|
|
|
|
for _, v := range array {
|
|
bitmap[int(v)/64] |= (uint64(1) << uint(v%64))
|
|
}
|
|
}
|
|
|
|
// runToBitmap converts from RLE format to bitmap format.
|
|
func (c *Container) runToBitmap() {
|
|
statsHit("runToBitmap")
|
|
runs := c.runs()
|
|
bitmap := make([]uint64, bitmapN)
|
|
c.typ = containerBitmap
|
|
c.setBitmap(bitmap)
|
|
|
|
c.mapped = false
|
|
|
|
// return early if empty
|
|
if c.n == 0 {
|
|
return
|
|
}
|
|
|
|
for _, r := range runs {
|
|
// TODO this can be ~64x faster for long runs by setting maxBitmap instead of single bits
|
|
//note v must be int or will overflow
|
|
for v := int(r.start); v <= int(r.last); v++ {
|
|
bitmap[v/64] |= (uint64(1) << uint(v%64))
|
|
}
|
|
}
|
|
}
|
|
|
|
// bitmapToRun converts from bitmap format to RLE format.
|
|
func (c *Container) bitmapToRun(numRuns int32) {
|
|
statsHit("bitmapToRun")
|
|
bitmap := c.bitmap()
|
|
c.mapped = false
|
|
c.typ = containerRun
|
|
// return early if empty
|
|
if c.n == 0 {
|
|
c.setRuns(nil)
|
|
return
|
|
}
|
|
if numRuns == 0 {
|
|
numRuns = bitmapCountRuns(bitmap)
|
|
}
|
|
|
|
runs := make([]interval16, 0, numRuns)
|
|
|
|
current := bitmap[0]
|
|
var i, start, last uint16
|
|
for {
|
|
// skip while empty
|
|
for current == 0 && i < bitmapN-1 {
|
|
i++
|
|
current = bitmap[i]
|
|
}
|
|
|
|
if current == 0 {
|
|
break
|
|
}
|
|
currentStart := uint16(trailingZeroN(current))
|
|
start = 64*i + currentStart
|
|
|
|
// pad LSBs with 1s
|
|
current = current | (current - 1)
|
|
|
|
// find next 0
|
|
for current == maxBitmap && i < bitmapN-1 {
|
|
i++
|
|
current = bitmap[i]
|
|
}
|
|
|
|
if current == maxBitmap {
|
|
|
|
// bitmap[1023] == maxBitmap
|
|
runs = append(runs, interval16{start, maxContainerVal})
|
|
break
|
|
}
|
|
currentLast := uint16(trailingZeroN(^current))
|
|
last = 64*i + currentLast
|
|
runs = append(runs, interval16{start, last - 1})
|
|
|
|
// pad LSBs with 0s
|
|
current = current & (current + 1)
|
|
}
|
|
c.setRuns(runs)
|
|
}
|
|
|
|
// arrayToRun converts from array format to RLE format.
|
|
func (c *Container) arrayToRun(numRuns int32) {
|
|
statsHit("arrayToRun")
|
|
array := c.array()
|
|
c.typ = containerRun
|
|
c.mapped = false
|
|
// return early if empty
|
|
if c.n == 0 {
|
|
c.setRuns(nil)
|
|
return
|
|
}
|
|
if numRuns == 0 {
|
|
numRuns = arrayCountRuns(array)
|
|
}
|
|
|
|
runs := make([]interval16, 0, numRuns)
|
|
start := array[0]
|
|
for i, v := range array[1:] {
|
|
if v-array[i] > 1 {
|
|
// if current-previous > 1, one run ends and another begins
|
|
runs = append(runs, interval16{start, array[i]})
|
|
start = v
|
|
}
|
|
}
|
|
// append final run
|
|
runs = append(runs, interval16{start, array[c.n-1]})
|
|
c.setRuns(runs)
|
|
}
|
|
|
|
// runToArray converts from RLE format to array format.
|
|
func (c *Container) runToArray() {
|
|
statsHit("runToArray")
|
|
runs := c.runs()
|
|
c.typ = containerArray
|
|
c.mapped = false
|
|
|
|
// return early if empty
|
|
if c.n == 0 {
|
|
c.setArray(nil)
|
|
return
|
|
}
|
|
|
|
array := make([]uint16, c.n)
|
|
n := int32(0)
|
|
for _, r := range runs {
|
|
for v := int(r.start); v <= int(r.last); v++ {
|
|
array[n] = uint16(v)
|
|
n++
|
|
}
|
|
}
|
|
if roaringParanoia {
|
|
if n != c.n {
|
|
panic("run has fewer bits set than container.n")
|
|
}
|
|
}
|
|
c.setArray(array)
|
|
}
|
|
|
|
// Clone returns a copy of c.
|
|
func (c *Container) Clone() (out *Container) {
|
|
statsHit("Container/Clone")
|
|
switch c.typ {
|
|
case containerArray:
|
|
statsHit("Container/Clone/Array")
|
|
cArray := c.array()
|
|
array := make([]uint16, len(cArray))
|
|
copy(array, cArray)
|
|
out = NewContainerArray(array)
|
|
case containerBitmap:
|
|
statsHit("Container/Clone/Bitmap")
|
|
other := NewContainerBitmap(c.n, nil)
|
|
copy(other.bitmap(), c.bitmap())
|
|
out = other
|
|
case containerRun:
|
|
statsHit("Container/Clone/Run")
|
|
cRuns := c.runs()
|
|
runs := make([]interval16, len(cRuns))
|
|
copy(runs, cRuns)
|
|
out = NewContainerRun(runs)
|
|
}
|
|
// this should probably never happen
|
|
if roaringParanoia {
|
|
if out.n != out.count() {
|
|
panic("cloned container has wrong n")
|
|
}
|
|
}
|
|
return out
|
|
}
|
|
|
|
// WriteTo writes c to w.
|
|
func (c *Container) WriteTo(w io.Writer) (n int64, err error) {
|
|
if c.isArray() {
|
|
return c.arrayWriteTo(w)
|
|
} else if c.isRun() {
|
|
return c.runWriteTo(w)
|
|
} else {
|
|
return c.bitmapWriteTo(w)
|
|
}
|
|
}
|
|
|
|
func (c *Container) arrayWriteTo(w io.Writer) (n int64, err error) {
|
|
statsHit("Container/arrayWriteTo")
|
|
array := c.array()
|
|
if len(array) == 0 {
|
|
return 0, nil
|
|
}
|
|
|
|
// Verify all elements are valid.
|
|
// TODO: instead of commenting this out, we need to make it a configuration option
|
|
// for _, v := range c.array {
|
|
// assert(lowbits(uint64(v)) == v, "cannot write array value out of range: %d", v)
|
|
//}
|
|
|
|
// Write sizeof(uint16) * cardinality bytes.
|
|
nn, err := w.Write((*[0xFFFFFFF]byte)(unsafe.Pointer(&array[0]))[: 2*c.n : 2*c.n])
|
|
return int64(nn), err
|
|
}
|
|
|
|
func (c *Container) bitmapWriteTo(w io.Writer) (n int64, err error) {
|
|
statsHit("Container/bitmapWriteTo")
|
|
bitmap := c.bitmap()
|
|
// Write sizeof(uint64) * bitmapN bytes.
|
|
nn, err := w.Write((*[0xFFFFFFF]byte)(unsafe.Pointer(&bitmap[0]))[:(8 * bitmapN):(8 * bitmapN)])
|
|
return int64(nn), err
|
|
}
|
|
|
|
func (c *Container) runWriteTo(w io.Writer) (n int64, err error) {
|
|
statsHit("Container/runWriteTo")
|
|
runs := c.runs()
|
|
if len(runs) == 0 {
|
|
return 0, nil
|
|
}
|
|
var byte2 [2]byte
|
|
binary.LittleEndian.PutUint16(byte2[:], uint16(len(runs)))
|
|
_, err = w.Write(byte2[:])
|
|
if err != nil {
|
|
return 0, err
|
|
}
|
|
nn, err := w.Write((*[0xFFFFFFF]byte)(unsafe.Pointer(&runs[0]))[: interval16Size*len(runs) : interval16Size*len(runs)])
|
|
return int64(runCountHeaderSize + nn), err
|
|
}
|
|
|
|
// size returns the encoded size of the container, in bytes.
|
|
func (c *Container) size() int {
|
|
if c.isArray() {
|
|
return len(c.array()) * 2 // sizeof(uint16)
|
|
} else if c.isRun() {
|
|
return len(c.runs())*interval16Size + runCountHeaderSize
|
|
} else {
|
|
return len(c.bitmap()) * 8 // sizeof(uint64)
|
|
}
|
|
}
|
|
|
|
// info returns the current stats about the container.
|
|
func (c *Container) info() containerInfo {
|
|
info := containerInfo{N: c.n}
|
|
|
|
if c.isArray() {
|
|
info.Type = "array"
|
|
info.Alloc = len(c.array()) * 2 // sizeof(uint16)
|
|
} else if c.isRun() {
|
|
info.Type = "run"
|
|
info.Alloc = len(c.runs())*interval16Size + runCountHeaderSize
|
|
} else {
|
|
info.Type = "bitmap"
|
|
info.Alloc = len(c.bitmap()) * 8 // sizeof(uint64)
|
|
}
|
|
|
|
if c.mapped {
|
|
if c.isArray() {
|
|
info.Pointer = unsafe.Pointer(&c.array()[0])
|
|
} else if c.isRun() {
|
|
info.Pointer = unsafe.Pointer(&c.runs()[0])
|
|
} else {
|
|
info.Pointer = unsafe.Pointer(&c.bitmap()[0])
|
|
}
|
|
}
|
|
|
|
return info
|
|
}
|
|
|
|
// check performs a consistency check on the container.
|
|
func (c *Container) check() error {
|
|
var a ErrorList
|
|
|
|
if c.isArray() {
|
|
array := c.array()
|
|
if int32(len(array)) != c.n {
|
|
a.Append(fmt.Errorf("array count mismatch: count=%d, n=%d", len(array), c.n))
|
|
}
|
|
} else if c.isRun() {
|
|
n := c.runCountRange(0, maxContainerVal+1)
|
|
if n != c.n {
|
|
a.Append(fmt.Errorf("run count mismatch: count=%d, n=%d", n, c.n))
|
|
}
|
|
} else if c.isBitmap() {
|
|
if n := c.bitmapCountRange(0, maxContainerVal+1); n != c.n {
|
|
a.Append(fmt.Errorf("bitmap count mismatch: count=%d, n=%d", n, c.n))
|
|
}
|
|
} else {
|
|
a.Append(fmt.Errorf("empty container"))
|
|
if c.n != 0 {
|
|
a.Append(fmt.Errorf("empty container with nonzero count: n=%d", c.n))
|
|
}
|
|
}
|
|
|
|
if a == nil {
|
|
return nil
|
|
}
|
|
return a
|
|
}
|
|
|
|
// Repair repairs the cardinality of c if it has been corrupted by
|
|
// optimized operations.
|
|
func (c *Container) Repair() {
|
|
if c.isBitmap() {
|
|
c.bitmapRepair()
|
|
}
|
|
}
|
|
|
|
func (c *Container) bitmapRepair() {
|
|
n := int32(0)
|
|
// Manually unroll loop to make it a little faster.
|
|
// TODO(rartoul): Can probably make this a few x faster using
|
|
// SIMD instructions.
|
|
bitmap := c.bitmap()[:bitmapN]
|
|
for i := 0; i <= bitmapN-4; i += 4 {
|
|
n += int32(popcount(bitmap[i]))
|
|
n += int32(popcount(bitmap[i+1]))
|
|
n += int32(popcount(bitmap[i+2]))
|
|
n += int32(popcount(bitmap[i+3]))
|
|
}
|
|
c.n = n
|
|
}
|
|
|
|
// containerInfo represents a point-in-time snapshot of container stats.
|
|
type containerInfo struct {
|
|
Key uint64 // container key
|
|
Type string // container type (array, bitmap, or run)
|
|
N int32 // number of bits
|
|
Alloc int // memory used
|
|
Pointer unsafe.Pointer // offset within the mmap
|
|
}
|
|
|
|
// flip returns a new container containing the inverse of all
|
|
// bits in a.
|
|
func flip(a *Container) *Container { // nolint: deadcode
|
|
if a.isArray() {
|
|
return flipArray(a)
|
|
} else if a.isRun() {
|
|
return flipRun(a)
|
|
} else {
|
|
return flipBitmap(a)
|
|
}
|
|
}
|
|
|
|
func flipArray(b *Container) *Container {
|
|
statsHit("flipArray")
|
|
// TODO: actually implement this
|
|
x := b.Clone()
|
|
x.arrayToBitmap()
|
|
return flipBitmap(x)
|
|
}
|
|
|
|
func flipBitmap(b *Container) *Container {
|
|
statsHit("flipBitmap")
|
|
other := NewContainerBitmap(0, nil)
|
|
bitmap := b.bitmap()
|
|
otherBitmap := other.bitmap()
|
|
for i, word := range bitmap {
|
|
otherBitmap[i] = ^word
|
|
}
|
|
|
|
other.n = other.count()
|
|
return other
|
|
}
|
|
|
|
func flipRun(b *Container) *Container {
|
|
statsHit("flipRun")
|
|
// TODO: actually implement this
|
|
x := b.Clone()
|
|
x.runToBitmap()
|
|
return flipBitmap(x)
|
|
}
|
|
|
|
func intersectionCount(a, b *Container) int32 {
|
|
if a.isArray() {
|
|
if b.isArray() {
|
|
return intersectionCountArrayArray(a, b)
|
|
} else if b.isRun() {
|
|
return intersectionCountArrayRun(a, b)
|
|
} else {
|
|
return intersectionCountArrayBitmap(a, b)
|
|
}
|
|
} else if a.isRun() {
|
|
if b.isArray() {
|
|
return intersectionCountArrayRun(b, a)
|
|
} else if b.isRun() {
|
|
return intersectionCountRunRun(a, b)
|
|
} else {
|
|
return intersectionCountBitmapRun(b, a)
|
|
}
|
|
} else {
|
|
if b.isArray() {
|
|
return intersectionCountArrayBitmap(b, a)
|
|
} else if b.isRun() {
|
|
return intersectionCountBitmapRun(a, b)
|
|
} else {
|
|
return intersectionCountBitmapBitmap(a, b)
|
|
}
|
|
}
|
|
}
|
|
|
|
func intersectionCountArrayArray(a, b *Container) (n int32) {
|
|
statsHit("intersectionCount/ArrayArray")
|
|
ca, cb := a.array(), b.array()
|
|
na, nb := len(ca), len(cb)
|
|
if na == 0 || nb == 0 {
|
|
return 0
|
|
}
|
|
if na > nb {
|
|
ca, cb = cb, ca
|
|
na, nb = nb, na // nolint: ineffassign
|
|
}
|
|
j := 0
|
|
for _, va := range ca {
|
|
for cb[j] < va {
|
|
j++
|
|
if j >= nb {
|
|
return n
|
|
}
|
|
}
|
|
if cb[j] == va {
|
|
n++
|
|
}
|
|
}
|
|
return n
|
|
}
|
|
|
|
func intersectionCountArrayRun(a, b *Container) (n int32) {
|
|
statsHit("intersectionCount/ArrayRun")
|
|
array, runs := a.array(), b.runs()
|
|
na, nb := len(array), len(runs)
|
|
for i, j := 0, 0; i < na && j < nb; {
|
|
va, vb := array[i], runs[j]
|
|
if va < vb.start {
|
|
i++
|
|
} else if va >= vb.start && va <= vb.last {
|
|
i++
|
|
n++
|
|
} else if va > vb.last {
|
|
j++
|
|
}
|
|
}
|
|
return n
|
|
}
|
|
|
|
func intersectionCountRunRun(a, b *Container) (n int32) {
|
|
statsHit("intersectionCount/RunRun")
|
|
ra, rb := a.runs(), b.runs()
|
|
na, nb := len(ra), len(rb)
|
|
for i, j := 0, 0; i < na && j < nb; {
|
|
va, vb := ra[i], rb[j]
|
|
if va.last < vb.start {
|
|
// |--va--| |--vb--|
|
|
i++
|
|
} else if va.start > vb.last {
|
|
// |--vb--| |--va--|
|
|
j++
|
|
} else if va.last > vb.last && va.start >= vb.start {
|
|
// |--vb-|-|-va--|
|
|
n += 1 + int32(vb.last-va.start)
|
|
j++
|
|
} else if va.last > vb.last && va.start < vb.start {
|
|
// |--va|--vb--|--|
|
|
n += 1 + int32(vb.last-vb.start)
|
|
j++
|
|
} else if va.last <= vb.last && va.start >= vb.start {
|
|
// |--vb|--va--|--|
|
|
n += 1 + int32(va.last-va.start)
|
|
i++
|
|
} else if va.last <= vb.last && va.start < vb.start {
|
|
// |--va-|-|-vb--|
|
|
n += 1 + int32(va.last-vb.start)
|
|
i++
|
|
}
|
|
}
|
|
return n
|
|
}
|
|
|
|
func intersectionCountBitmapRun(a, b *Container) (n int32) {
|
|
statsHit("intersectionCount/BitmapRun")
|
|
for _, iv := range b.runs() {
|
|
n += a.bitmapCountRange(int32(iv.start), int32(iv.last)+1)
|
|
}
|
|
return n
|
|
}
|
|
|
|
func intersectionCountArrayBitmap(a, b *Container) (n int32) {
|
|
statsHit("intersectionCount/ArrayBitmap")
|
|
bitmap := b.bitmap()
|
|
ln := len(bitmap)
|
|
for _, val := range a.array() {
|
|
i := int(val >> 6)
|
|
if i >= ln {
|
|
break
|
|
}
|
|
off := val % 64
|
|
n += int32(bitmap[i]>>off) & 1
|
|
}
|
|
return n
|
|
}
|
|
|
|
func intersectionCountBitmapBitmap(a, b *Container) (n int32) {
|
|
statsHit("intersectionCount/BitmapBitmap")
|
|
return int32(popcountAndSlice(a.bitmap(), b.bitmap()))
|
|
}
|
|
|
|
func intersect(a, b *Container) *Container {
|
|
if a.isArray() {
|
|
if b.isArray() {
|
|
return intersectArrayArray(a, b)
|
|
} else if b.isRun() {
|
|
return intersectArrayRun(a, b)
|
|
} else {
|
|
return intersectArrayBitmap(a, b)
|
|
}
|
|
} else if a.isRun() {
|
|
if b.isArray() {
|
|
return intersectArrayRun(b, a)
|
|
} else if b.isRun() {
|
|
return intersectRunRun(a, b)
|
|
} else {
|
|
return intersectBitmapRun(b, a)
|
|
}
|
|
} else {
|
|
if b.isArray() {
|
|
return intersectArrayBitmap(b, a)
|
|
} else if b.isRun() {
|
|
return intersectBitmapRun(a, b)
|
|
} else {
|
|
return intersectBitmapBitmap(a, b)
|
|
}
|
|
}
|
|
}
|
|
|
|
func intersectArrayArray(a, b *Container) *Container {
|
|
statsHit("intersect/ArrayArray")
|
|
aa, ab := a.array(), b.array()
|
|
na, nb := len(aa), len(ab)
|
|
output := make([]uint16, 0, na)
|
|
for i, j := 0, 0; i < na && j < nb; {
|
|
va, vb := aa[i], ab[j]
|
|
if va < vb {
|
|
i++
|
|
} else if va > vb {
|
|
j++
|
|
} else {
|
|
output = append(output, va)
|
|
i, j = i+1, j+1
|
|
}
|
|
}
|
|
return NewContainerArray(output)
|
|
}
|
|
|
|
// intersectArrayRun computes the intersect of an array container and a run
|
|
// container. The return is always an array container (since it's guaranteed to
|
|
// be low-cardinality)
|
|
func intersectArrayRun(a, b *Container) *Container {
|
|
statsHit("intersect/ArrayRun")
|
|
aa, rb := a.array(), b.runs()
|
|
na, nb := len(aa), len(rb)
|
|
var output []uint16
|
|
for i, j := 0, 0; i < na && j < nb; {
|
|
va, vb := aa[i], rb[j]
|
|
if va < vb.start {
|
|
i++
|
|
} else if va > vb.last {
|
|
j++
|
|
} else {
|
|
output = append(output, va)
|
|
i++
|
|
}
|
|
}
|
|
return NewContainerArray(output)
|
|
}
|
|
|
|
// intersectRunRun computes the intersect of two run containers.
|
|
func intersectRunRun(a, b *Container) *Container {
|
|
statsHit("intersect/RunRun")
|
|
output := NewContainerRun(nil)
|
|
ra, rb := a.runs(), b.runs()
|
|
na, nb := len(ra), len(rb)
|
|
for i, j := 0, 0; i < na && j < nb; {
|
|
va, vb := ra[i], rb[j]
|
|
if va.last < vb.start {
|
|
// |--va--| |--vb--|
|
|
i++
|
|
} else if vb.last < va.start {
|
|
// |--vb--| |--va--|
|
|
j++
|
|
} else if va.last > vb.last && va.start >= vb.start {
|
|
// |--vb-|-|-va--|
|
|
output.n += output.runAppendInterval(interval16{start: va.start, last: vb.last})
|
|
j++
|
|
} else if va.last > vb.last && va.start < vb.start {
|
|
// |--va|--vb--|--|
|
|
output.n += output.runAppendInterval(vb)
|
|
j++
|
|
} else if va.last <= vb.last && va.start >= vb.start {
|
|
// |--vb|--va--|--|
|
|
output.n += output.runAppendInterval(va)
|
|
i++
|
|
} else if va.last <= vb.last && va.start < vb.start {
|
|
// |--va-|-|-vb--|
|
|
output.n += output.runAppendInterval(interval16{start: vb.start, last: va.last})
|
|
i++
|
|
}
|
|
}
|
|
runs := output.runs()
|
|
if output.n < ArrayMaxSize && int32(len(runs)) > output.n/2 {
|
|
output.runToArray()
|
|
} else if len(runs) > runMaxSize {
|
|
output.runToBitmap()
|
|
}
|
|
return output
|
|
}
|
|
|
|
// intersectBitmapRun returns an array container if either container's
|
|
// cardinality is <= ArrayMaxSize. Otherwise it returns a bitmap container.
|
|
func intersectBitmapRun(a, b *Container) *Container {
|
|
statsHit("intersect/BitmapRun")
|
|
var output *Container
|
|
runs := b.runs()
|
|
if b.n <= ArrayMaxSize || a.n <= ArrayMaxSize {
|
|
// output is array container
|
|
array := make([]uint16, 0, b.n)
|
|
for _, iv := range runs {
|
|
for i := iv.start; i <= iv.last; i++ {
|
|
if a.bitmapContains(i) {
|
|
array = append(array, i)
|
|
}
|
|
// If the run ends the container, break to avoid an infinite loop.
|
|
if i == 65535 {
|
|
break
|
|
}
|
|
}
|
|
}
|
|
|
|
output = NewContainerArray(array)
|
|
} else {
|
|
// right now this iterates through the runs and sets integers in the
|
|
// bitmap that are in the runs. alternately, we could zero out ranges in
|
|
// the bitmap which are between runs.
|
|
output = NewContainerBitmap(0, nil)
|
|
bitmap := output.bitmap()
|
|
aBitmap := a.bitmap()
|
|
for j := 0; j < len(runs); j++ {
|
|
vb := runs[j]
|
|
i := vb.start >> 6 // index into a
|
|
vastart := i << 6
|
|
valast := vastart + 63
|
|
for valast >= vb.start && vastart <= vb.last && i < bitmapN {
|
|
if vastart >= vb.start && valast <= vb.last { // a within b
|
|
bitmap[i] = aBitmap[i]
|
|
output.n += int32(popcount(aBitmap[i]))
|
|
} else if vb.start >= vastart && vb.last <= valast { // b within a
|
|
var mask uint64 = ((1 << (vb.last - vb.start + 1)) - 1) << (vb.start - vastart)
|
|
bits := aBitmap[i] & mask
|
|
bitmap[i] |= bits
|
|
output.n += int32(popcount(bits))
|
|
} else if vastart < vb.start { // a overlaps front of b
|
|
offset := 64 - (1 + valast - vb.start)
|
|
bits := (aBitmap[i] >> offset) << offset
|
|
bitmap[i] |= bits
|
|
output.n += int32(popcount(bits))
|
|
} else if vb.start < vastart { // b overlaps front of a
|
|
offset := 64 - (1 + vb.last - vastart)
|
|
bits := (aBitmap[i] << offset) >> offset
|
|
bitmap[i] |= bits
|
|
output.n += int32(popcount(bits))
|
|
}
|
|
// update loop vars
|
|
i++
|
|
vastart = i << 6
|
|
valast = vastart + 63
|
|
}
|
|
}
|
|
}
|
|
return output
|
|
}
|
|
|
|
func intersectArrayBitmap(a, b *Container) *Container {
|
|
statsHit("intersect/ArrayBitmap")
|
|
array := make([]uint16, 0)
|
|
bBitmap := b.bitmap()
|
|
for _, va := range a.array() {
|
|
bmidx := va / 64
|
|
bidx := va % 64
|
|
mask := uint64(1) << bidx
|
|
b := bBitmap[bmidx]
|
|
if b&mask > 0 {
|
|
array = append(array, va)
|
|
}
|
|
}
|
|
return NewContainerArray(array)
|
|
}
|
|
|
|
func intersectBitmapBitmap(a, b *Container) *Container {
|
|
statsHit("intersect/BitmapBitmap")
|
|
// local variables added to prevent BCE checks in loop
|
|
// see https://go101.org/article/bounds-check-elimination.html
|
|
var (
|
|
ab = a.bitmap()[:bitmapN]
|
|
bb = b.bitmap()[:bitmapN]
|
|
ob = make([]uint64, bitmapN)
|
|
n int32
|
|
)
|
|
for i := 0; i < bitmapN; i++ {
|
|
ob[i] = ab[i] & bb[i]
|
|
n += int32(popcount(ob[i]))
|
|
}
|
|
|
|
output := NewContainerBitmap(n, ob)
|
|
return output
|
|
}
|
|
|
|
func union(a, b *Container) *Container {
|
|
if a.isArray() {
|
|
if b.isArray() {
|
|
return unionArrayArray(a, b)
|
|
} else if b.isRun() {
|
|
return unionArrayRun(a, b)
|
|
} else {
|
|
return unionArrayBitmap(a, b)
|
|
}
|
|
} else if a.isRun() {
|
|
if b.isArray() {
|
|
return unionArrayRun(b, a)
|
|
} else if b.isRun() {
|
|
return unionRunRun(a, b)
|
|
} else {
|
|
return unionBitmapRun(b, a)
|
|
}
|
|
} else {
|
|
if b.isArray() {
|
|
return unionArrayBitmap(b, a)
|
|
} else if b.isRun() {
|
|
return unionBitmapRun(a, b)
|
|
} else {
|
|
return unionBitmapBitmap(a, b)
|
|
}
|
|
}
|
|
}
|
|
|
|
func unionArrayArray(a, b *Container) *Container {
|
|
statsHit("union/ArrayArray")
|
|
aa, ab := a.array(), b.array()
|
|
na, nb := len(aa), len(ab)
|
|
output := make([]uint16, na+nb)
|
|
n := 0
|
|
for i, j := 0, 0; ; {
|
|
if i >= na && j >= nb {
|
|
break
|
|
} else if i < na && j >= nb {
|
|
output[n] = aa[i]
|
|
n++
|
|
i++
|
|
continue
|
|
} else if i >= na && j < nb {
|
|
output[n] = ab[j]
|
|
n++
|
|
j++
|
|
continue
|
|
}
|
|
|
|
va, vb := aa[i], ab[j]
|
|
if va < vb {
|
|
output[n] = va
|
|
n++
|
|
i++
|
|
} else if va > vb {
|
|
output[n] = vb
|
|
n++
|
|
j++
|
|
} else {
|
|
output[n] = va
|
|
n++
|
|
i, j = i+1, j+1
|
|
}
|
|
}
|
|
return NewContainerArray(output[:n])
|
|
}
|
|
|
|
// unionArrayArrayInPlace does what it sounds like -- tries to combine
|
|
// the two arrays in-place. It does not try to ensure that the result is
|
|
// of a good array size, so it could be up to twice that size, temporarily.
|
|
func unionArrayArrayInPlace(a, b *Container) {
|
|
statsHit("union/ArrayArrayInPlace")
|
|
aa, ab := a.array(), b.array()
|
|
na, nb := len(aa), len(ab)
|
|
output := make([]uint16, na+nb)
|
|
outN := 0
|
|
for i, j := 0, 0; ; {
|
|
if i >= na && j >= nb {
|
|
break
|
|
} else if i < na && j >= nb {
|
|
copy(output[outN:], aa[i:])
|
|
outN += na - i
|
|
break
|
|
} else if i >= na && j < nb {
|
|
copy(output[outN:], ab[j:])
|
|
outN += nb - j
|
|
break
|
|
}
|
|
|
|
va, vb := aa[i], ab[j]
|
|
if va < vb {
|
|
output[outN] = va
|
|
outN++
|
|
i++
|
|
} else if va > vb {
|
|
output[outN] = vb
|
|
outN++
|
|
j++
|
|
} else {
|
|
output[outN] = va
|
|
outN++
|
|
i++
|
|
j++
|
|
}
|
|
}
|
|
a.setArray(output[:outN])
|
|
a.n = int32(outN)
|
|
if a.n > ArrayMaxSize {
|
|
a.optimize()
|
|
}
|
|
}
|
|
|
|
// unionArrayRun optimistically assumes that the result will be a run container,
|
|
// and converts to a bitmap or array container afterwards if necessary.
|
|
func unionArrayRun(a, b *Container) *Container {
|
|
statsHit("union/ArrayRun")
|
|
if b.n == maxContainerVal+1 {
|
|
return b.Clone()
|
|
}
|
|
output := NewContainerRun(nil)
|
|
aa, rb := a.array(), b.runs()
|
|
na, nb := len(aa), len(rb)
|
|
var vb interval16
|
|
var va uint16
|
|
for i, j := 0, 0; i < na || j < nb; {
|
|
if i < na {
|
|
va = aa[i]
|
|
}
|
|
if j < nb {
|
|
vb = rb[j]
|
|
}
|
|
if i < na && (j >= nb || va < vb.start) {
|
|
output.n += output.runAppendInterval(interval16{start: va, last: va})
|
|
i++
|
|
} else {
|
|
output.n += output.runAppendInterval(vb)
|
|
j++
|
|
}
|
|
}
|
|
if output.n < ArrayMaxSize {
|
|
output.runToArray()
|
|
} else if len(output.runs()) > runMaxSize {
|
|
output.runToBitmap()
|
|
}
|
|
return output
|
|
}
|
|
|
|
// runAppendInterval adds the given interval to the run container. It assumes
|
|
// that the interval comes at the end of the list of runs, and does not check
|
|
// that this is the case. It will not behave correctly if the start of the given
|
|
// interval is earlier than the start of the last interval in the list of runs.
|
|
// Its return value is the amount by which the cardinality of the container was
|
|
// increased.
|
|
func (c *Container) runAppendInterval(v interval16) int32 {
|
|
runs := c.runs()
|
|
if len(runs) == 0 {
|
|
runs = append(runs, v)
|
|
c.setRuns(runs)
|
|
return int32(v.last-v.start) + 1
|
|
}
|
|
|
|
last := runs[len(runs)-1]
|
|
if last.last == maxContainerVal { //protect against overflow
|
|
return 0
|
|
}
|
|
if last.last+1 >= v.start && v.last > last.last {
|
|
runs[len(runs)-1].last = v.last
|
|
c.setRuns(runs)
|
|
return int32(v.last - last.last)
|
|
} else if last.last+1 < v.start {
|
|
runs = append(runs, v)
|
|
c.setRuns(runs)
|
|
return int32(v.last-v.start) + 1
|
|
}
|
|
return 0
|
|
}
|
|
|
|
func unionRunRun(a, b *Container) *Container {
|
|
statsHit("union/RunRun")
|
|
if a.n == maxContainerVal+1 {
|
|
return a.Clone()
|
|
}
|
|
if b.n == maxContainerVal+1 {
|
|
return b.Clone()
|
|
}
|
|
ra, rb := a.runs(), b.runs()
|
|
na, nb := len(ra), len(rb)
|
|
output := NewContainerRun(make([]interval16, 0, na+nb))
|
|
var va, vb interval16
|
|
for i, j := 0, 0; i < na || j < nb; {
|
|
if i < na {
|
|
va = ra[i]
|
|
}
|
|
if j < nb {
|
|
vb = rb[j]
|
|
}
|
|
if i < na && (j >= nb || va.start < vb.start) {
|
|
output.n += output.runAppendInterval(va)
|
|
i++
|
|
} else {
|
|
output.n += output.runAppendInterval(vb)
|
|
j++
|
|
}
|
|
}
|
|
if len(output.runs()) > runMaxSize {
|
|
output.runToBitmap()
|
|
}
|
|
return output
|
|
}
|
|
|
|
func unionBitmapRun(a, b *Container) *Container {
|
|
statsHit("union/BitmapRun")
|
|
if b.n == maxContainerVal+1 {
|
|
return b.Clone()
|
|
}
|
|
if a.n == maxContainerVal+1 {
|
|
return a.Clone()
|
|
}
|
|
output := a.Clone()
|
|
bitmap := output.bitmap()
|
|
for _, run := range b.runs() {
|
|
output.bitmapSetRange(bitmap, uint64(run.start), uint64(run.last)+1)
|
|
}
|
|
return output
|
|
}
|
|
|
|
// unions the run b into the bitmap a, mutating a in place. The n value of
|
|
// a will need to be repaired after the fact.
|
|
func unionBitmapRunInPlace(a, b *Container) {
|
|
a.unmapBitmap()
|
|
bitmap := a.bitmap()
|
|
statsHit("union/BitmapRun")
|
|
for _, run := range b.runs() {
|
|
bitmapSetRangeIgnoreN(bitmap, uint64(run.start), uint64(run.last)+1)
|
|
}
|
|
}
|
|
|
|
const maxBitmap = 0xFFFFFFFFFFFFFFFF
|
|
|
|
// sets all bits in [i, j) (c must be a bitmap container, and bitmap must
|
|
// be its bitmap).
|
|
func (c *Container) bitmapSetRange(bitmap []uint64, i, j uint64) {
|
|
x := i >> 6
|
|
y := (j - 1) >> 6
|
|
var X uint64 = maxBitmap << (i % 64)
|
|
var Y uint64 = maxBitmap >> (63 - ((j - 1) % 64))
|
|
xcnt := popcount(X)
|
|
ycnt := popcount(Y)
|
|
if x == y {
|
|
c.n += int32((j - i) - popcount(bitmap[x]&(X&Y)))
|
|
bitmap[x] |= (X & Y)
|
|
} else {
|
|
c.n += int32(xcnt - popcount(bitmap[x]&X))
|
|
bitmap[x] |= X
|
|
for i := x + 1; i < y; i++ {
|
|
c.n += int32(64 - popcount(bitmap[i]))
|
|
bitmap[i] = maxBitmap
|
|
}
|
|
c.n += int32(ycnt - popcount(bitmap[y]&Y))
|
|
bitmap[y] |= Y
|
|
}
|
|
}
|
|
|
|
// sets all bits in [i, j) without updating any corresponding n value.
|
|
func bitmapSetRangeIgnoreN(bitmap []uint64, i, j uint64) {
|
|
x := i >> 6
|
|
y := (j - 1) >> 6
|
|
var X uint64 = maxBitmap << (i % 64)
|
|
var Y uint64 = maxBitmap >> (63 - ((j - 1) % 64))
|
|
|
|
if x == y {
|
|
bitmap[x] |= (X & Y)
|
|
} else {
|
|
bitmap[x] |= X
|
|
for i := x + 1; i < y; i++ {
|
|
bitmap[i] = maxBitmap
|
|
}
|
|
bitmap[y] |= Y
|
|
}
|
|
}
|
|
|
|
// xor's all bits in [i, j) with all true (c must be a bitmap container).
|
|
func (c *Container) bitmapXorRange(i, j uint64) {
|
|
x := i >> 6
|
|
y := (j - 1) >> 6
|
|
var X uint64 = maxBitmap << (i % 64)
|
|
var Y uint64 = maxBitmap >> (63 - ((j - 1) % 64))
|
|
bitmap := c.bitmap()
|
|
if x == y {
|
|
cnt := popcount(bitmap[x])
|
|
bitmap[x] ^= (X & Y) //// flip
|
|
c.n += int32(popcount(bitmap[x]) - cnt)
|
|
} else {
|
|
cnt := popcount(bitmap[x])
|
|
bitmap[x] ^= X
|
|
c.n += int32(popcount(bitmap[x]) - cnt)
|
|
for i := x + 1; i < y; i++ {
|
|
cnt = popcount(bitmap[i])
|
|
bitmap[i] ^= maxBitmap
|
|
c.n += int32(popcount(bitmap[i]) - cnt)
|
|
}
|
|
cnt = popcount(bitmap[y])
|
|
bitmap[y] ^= Y
|
|
c.n += int32(popcount(bitmap[y]) - cnt)
|
|
}
|
|
}
|
|
|
|
// zeroes all bits in [i, j) (c must be a bitmap container)
|
|
func (c *Container) bitmapZeroRange(i, j uint64) {
|
|
x := i >> 6
|
|
y := (j - 1) >> 6
|
|
var X uint64 = maxBitmap << (i % 64)
|
|
var Y uint64 = maxBitmap >> (63 - ((j - 1) % 64))
|
|
bitmap := c.bitmap()
|
|
if x == y {
|
|
c.n -= int32(popcount(bitmap[x] & (X & Y)))
|
|
bitmap[x] &= ^(X & Y)
|
|
} else {
|
|
c.n -= int32(popcount(bitmap[x] & X))
|
|
bitmap[x] &= ^X
|
|
for i := x + 1; i < y; i++ {
|
|
c.n -= int32(popcount(bitmap[i]))
|
|
bitmap[i] = 0
|
|
}
|
|
c.n -= int32(popcount(bitmap[y] & Y))
|
|
bitmap[y] &= ^Y
|
|
}
|
|
}
|
|
|
|
func (c *Container) equals(c2 *Container) bool {
|
|
if c.mapped != c2.mapped || c.typ != c2.typ || c.n != c2.n {
|
|
return false
|
|
}
|
|
if c.typ == containerArray {
|
|
ca, c2a := c.array(), c2.array()
|
|
if len(ca) != len(c2a) {
|
|
return false
|
|
}
|
|
for i := 0; i < len(ca); i++ {
|
|
if ca[i] != c2a[i] {
|
|
return false
|
|
}
|
|
}
|
|
} else if c.typ == containerBitmap {
|
|
cb, c2b := c.bitmap(), c2.bitmap()
|
|
if len(cb) != len(c2b) {
|
|
return false
|
|
}
|
|
for i := 0; i < len(cb); i++ {
|
|
if cb[i] != c2b[i] {
|
|
return false
|
|
}
|
|
}
|
|
} else if c.typ == containerRun {
|
|
cr, c2r := c.runs(), c2.runs()
|
|
if len(cr) != len(c2r) {
|
|
return false
|
|
}
|
|
for i := 0; i < len(cr); i++ {
|
|
if cr[i] != c2r[i] {
|
|
return false
|
|
}
|
|
}
|
|
} else {
|
|
panic(fmt.Sprintf("unknown container type: %v", c.typ))
|
|
}
|
|
return true
|
|
}
|
|
|
|
func unionArrayBitmap(a, b *Container) *Container {
|
|
output := b.Clone()
|
|
bitmap := output.bitmap()
|
|
for _, v := range a.array() {
|
|
if !output.bitmapContains(v) {
|
|
bitmap[v/64] |= (1 << uint64(v%64))
|
|
output.n++
|
|
}
|
|
}
|
|
return output
|
|
}
|
|
|
|
// unions array b into bitmap a, mutating a in place. The n value
|
|
// of a will need to be repaired after the fact.
|
|
func unionBitmapArrayInPlace(a, b *Container) {
|
|
a.unmapBitmap()
|
|
bitmap := a.bitmap()
|
|
for _, v := range b.array() {
|
|
bitmap[v>>6] |= (uint64(1) << (v % 64))
|
|
}
|
|
}
|
|
|
|
func unionBitmapBitmap(a, b *Container) *Container {
|
|
// local variables added to prevent BCE checks in loop
|
|
// see https://go101.org/article/bounds-check-elimination.html
|
|
|
|
var (
|
|
ab = a.bitmap()[:bitmapN]
|
|
bb = b.bitmap()[:bitmapN]
|
|
ob = make([]uint64, bitmapN)[:bitmapN]
|
|
|
|
n int32
|
|
)
|
|
|
|
for i := 0; i < bitmapN; i++ {
|
|
ob[i] = ab[i] | bb[i]
|
|
n += int32(popcount(ob[i]))
|
|
}
|
|
|
|
output := NewContainerBitmap(n, ob)
|
|
return output
|
|
}
|
|
|
|
// unions bitmap b into bitmap a, mutating a in place. The n value of
|
|
// a will need to be repaired after the fact.
|
|
func unionBitmapBitmapInPlace(a, b *Container) {
|
|
|
|
a.unmapBitmap()
|
|
|
|
// local variables added to prevent BCE checks in loop
|
|
// see https://go101.org/article/bounds-check-elimination.html
|
|
var (
|
|
ab = a.bitmap()[:bitmapN]
|
|
bb = b.bitmap()[:bitmapN]
|
|
)
|
|
// Manually unroll loop to make it a little faster.
|
|
// TODO(rartoul): Can probably make this a few x faster using
|
|
// SIMD instructions.
|
|
for i := 0; i < bitmapN; i += 4 {
|
|
ab[i] |= bb[i]
|
|
ab[i+1] |= bb[i+1]
|
|
ab[i+2] |= bb[i+2]
|
|
ab[i+3] |= bb[i+3]
|
|
}
|
|
}
|
|
|
|
func difference(a, b *Container) *Container {
|
|
if a.isArray() {
|
|
if b.isArray() {
|
|
return differenceArrayArray(a, b)
|
|
} else if b.isRun() {
|
|
return differenceArrayRun(a, b)
|
|
} else {
|
|
return differenceArrayBitmap(a, b)
|
|
}
|
|
} else if a.isRun() {
|
|
if b.isArray() {
|
|
return differenceRunArray(a, b)
|
|
} else if b.isRun() {
|
|
return differenceRunRun(a, b)
|
|
} else {
|
|
return differenceRunBitmap(a, b)
|
|
}
|
|
} else {
|
|
if b.isArray() {
|
|
return differenceBitmapArray(a, b)
|
|
} else if b.isRun() {
|
|
return differenceBitmapRun(a, b)
|
|
} else {
|
|
return differenceBitmapBitmap(a, b)
|
|
}
|
|
}
|
|
}
|
|
|
|
// differenceArrayArray computes the difference bween two arrays.
|
|
func differenceArrayArray(a, b *Container) *Container {
|
|
statsHit("difference/ArrayArray")
|
|
output := NewContainerArray(nil)
|
|
aa, ab := a.array(), b.array()
|
|
na, nb := len(aa), len(ab)
|
|
for i, j := 0, 0; i < na; {
|
|
va := aa[i]
|
|
if j >= nb {
|
|
output.add(va)
|
|
i++
|
|
continue
|
|
}
|
|
|
|
vb := ab[j]
|
|
if va < vb {
|
|
output.add(va)
|
|
i++
|
|
} else if va > vb {
|
|
j++
|
|
} else {
|
|
i, j = i+1, j+1
|
|
}
|
|
}
|
|
return output
|
|
}
|
|
|
|
// differenceArrayRun computes the difference of an array from a run.
|
|
func differenceArrayRun(a, b *Container) *Container {
|
|
statsHit("difference/ArrayRun")
|
|
// func (ac *arrayContainer) iandNotRun16(rc *runContainer16) container {
|
|
|
|
if a.n == 0 || b.n == 0 {
|
|
return a.Clone()
|
|
}
|
|
|
|
output := NewContainerArray(make([]uint16, 0, a.n))
|
|
// cardinality upper bound: card(A)
|
|
|
|
i := 0 // array index
|
|
j := 0 // run index
|
|
aa, rb := a.array(), b.runs()
|
|
|
|
// handle overlap
|
|
for i < int(a.n) {
|
|
|
|
// keep all array elements before beginning of runs
|
|
if aa[i] < rb[j].start {
|
|
output.add(aa[i])
|
|
i++
|
|
continue
|
|
}
|
|
|
|
// if array element in run, skip it
|
|
if aa[i] >= rb[j].start && aa[i] <= rb[j].last {
|
|
i++
|
|
continue
|
|
}
|
|
|
|
// if array element larger than current run, check next run
|
|
if aa[i] > rb[j].last {
|
|
j++
|
|
if j == len(rb) {
|
|
break
|
|
}
|
|
}
|
|
}
|
|
|
|
if i < len(aa) {
|
|
// keep all array elements after end of runs
|
|
// It's possible that output was converted from array to bitmap in output.add()
|
|
// so check container type before proceeding.
|
|
if output.typ == containerArray {
|
|
array := output.array()
|
|
array = append(array, aa[i:]...)
|
|
output.setArray(array)
|
|
// TODO: consider handling container.n mutations in one place
|
|
// like we do with container.add().
|
|
output.n += int32(len(aa[i:]))
|
|
} else {
|
|
for _, v := range aa[i:] {
|
|
output.add(v)
|
|
}
|
|
}
|
|
}
|
|
return output
|
|
}
|
|
|
|
// differenceBitmapRun computes the difference of an bitmap from a run.
|
|
func differenceBitmapRun(a, b *Container) *Container {
|
|
statsHit("difference/BitmapRun")
|
|
if a.n == 0 || b.n == 0 {
|
|
return a.Clone()
|
|
}
|
|
|
|
output := a.Clone()
|
|
for _, run := range b.runs() {
|
|
output.bitmapZeroRange(uint64(run.start), uint64(run.last)+1)
|
|
}
|
|
return output
|
|
}
|
|
|
|
// differenceRunArray subtracts the bits in an array container from a run
|
|
// container.
|
|
func differenceRunArray(a, b *Container) *Container {
|
|
statsHit("difference/RunArray")
|
|
if a.n == 0 || b.n == 0 {
|
|
return a.Clone()
|
|
}
|
|
ra, ab := a.runs(), b.array()
|
|
runs := make([]interval16, 0, len(ra))
|
|
|
|
bidx := 0
|
|
vb := ab[bidx]
|
|
|
|
RUNLOOP:
|
|
for _, run := range ra {
|
|
start := run.start
|
|
for vb < run.start {
|
|
bidx++
|
|
if bidx >= len(ab) {
|
|
break
|
|
}
|
|
vb = ab[bidx]
|
|
}
|
|
for vb >= run.start && vb <= run.last {
|
|
if vb == start {
|
|
if vb == 65535 { // overflow
|
|
break RUNLOOP
|
|
}
|
|
start++
|
|
bidx++
|
|
if bidx >= len(ab) {
|
|
break
|
|
}
|
|
vb = ab[bidx]
|
|
continue
|
|
}
|
|
runs = append(runs, interval16{start: start, last: vb - 1})
|
|
if vb == 65535 { // overflow
|
|
break RUNLOOP
|
|
}
|
|
start = vb + 1
|
|
bidx++
|
|
if bidx >= len(ab) {
|
|
break
|
|
}
|
|
vb = ab[bidx]
|
|
}
|
|
|
|
if start <= run.last {
|
|
runs = append(runs, interval16{start: start, last: run.last})
|
|
}
|
|
}
|
|
output := NewContainerRun(runs)
|
|
output.optimize()
|
|
return output
|
|
}
|
|
|
|
// differenceRunBitmap computes the difference of an run from a bitmap.
|
|
func differenceRunBitmap(a, b *Container) *Container {
|
|
statsHit("difference/RunBitmap")
|
|
ra := a.runs()
|
|
// If a is full, difference is the flip of b.
|
|
if len(ra) > 0 && ra[0].start == 0 && ra[0].last == 65535 {
|
|
return flipBitmap(b)
|
|
}
|
|
output := NewContainerRun(nil)
|
|
runs := output.runs()
|
|
if len(ra) == 0 {
|
|
return NewContainerRun(nil)
|
|
}
|
|
output.n = a.n
|
|
for _, inputRun := range ra {
|
|
run := inputRun
|
|
add := true
|
|
for bit := inputRun.start; bit <= inputRun.last; bit++ {
|
|
if b.bitmapContains(bit) {
|
|
output.n--
|
|
if run.start == bit {
|
|
if bit == 65535 { //overflow
|
|
add = false
|
|
}
|
|
|
|
run.start++
|
|
} else if bit == run.last {
|
|
run.last--
|
|
} else {
|
|
run.last = bit - 1
|
|
if run.last >= run.start {
|
|
runs = append(runs, run)
|
|
}
|
|
run.start = bit + 1
|
|
run.last = inputRun.last
|
|
}
|
|
if run.start > run.last {
|
|
break
|
|
}
|
|
}
|
|
|
|
if bit == 65535 { //overflow
|
|
break
|
|
}
|
|
}
|
|
if run.start <= run.last {
|
|
if add {
|
|
runs = append(runs, run)
|
|
}
|
|
}
|
|
}
|
|
|
|
output.setRuns(runs)
|
|
if output.n < ArrayMaxSize && int32(len(runs)) > output.n/2 {
|
|
output.runToArray()
|
|
} else if len(runs) > runMaxSize {
|
|
output.runToBitmap()
|
|
}
|
|
return output
|
|
}
|
|
|
|
// differenceRunRun computes the difference of two runs.
|
|
func differenceRunRun(a, b *Container) *Container {
|
|
statsHit("difference/RunRun")
|
|
if a.n == 0 || b.n == 0 {
|
|
return a.Clone()
|
|
}
|
|
|
|
ra, rb := a.runs(), b.runs()
|
|
apos := 0 // current a-run index
|
|
bpos := 0 // current b-run index
|
|
astart := ra[apos].start
|
|
alast := ra[apos].last
|
|
bstart := rb[bpos].start
|
|
blast := rb[bpos].last
|
|
alen := len(ra)
|
|
blen := len(rb)
|
|
|
|
runs := make([]interval16, 0, alen+blen) // TODO allocate max then truncate? or something else
|
|
// cardinality upper bound: sum of number of runs
|
|
// each B-run could split an A-run in two, up to len(b.runs) times
|
|
|
|
for apos < alen && bpos < blen {
|
|
switch {
|
|
case alast < bstart:
|
|
// current A-run entirely precedes current B-run: keep full A-run, advance to next A-run
|
|
runs = append(runs, interval16{start: astart, last: alast})
|
|
apos++
|
|
if apos < alen {
|
|
astart = ra[apos].start
|
|
alast = ra[apos].last
|
|
}
|
|
case blast < astart:
|
|
// current B-run entirely precedes current A-run: advance to next B-run
|
|
bpos++
|
|
if bpos < blen {
|
|
bstart = rb[bpos].start
|
|
blast = rb[bpos].last
|
|
}
|
|
default:
|
|
// overlap
|
|
if astart < bstart {
|
|
runs = append(runs, interval16{start: astart, last: bstart - 1})
|
|
}
|
|
if alast > blast {
|
|
astart = blast + 1
|
|
} else {
|
|
apos++
|
|
if apos < alen {
|
|
astart = ra[apos].start
|
|
alast = ra[apos].last
|
|
}
|
|
}
|
|
}
|
|
}
|
|
if apos < alen {
|
|
runs = append(runs, interval16{start: astart, last: alast})
|
|
apos++
|
|
if apos < alen {
|
|
runs = append(runs, ra[apos:]...)
|
|
}
|
|
}
|
|
return NewContainerRun(runs)
|
|
}
|
|
|
|
func differenceArrayBitmap(a, b *Container) *Container {
|
|
statsHit("difference/ArrayBitmap")
|
|
output := make([]uint16, 0, a.n)
|
|
bitmap := b.bitmap()
|
|
for _, va := range a.array() {
|
|
bmidx := va / 64
|
|
bidx := va % 64
|
|
mask := uint64(1) << bidx
|
|
b := bitmap[bmidx]
|
|
|
|
if mask&^b > 0 {
|
|
output = append(output, va)
|
|
}
|
|
}
|
|
return NewContainerArray(output)
|
|
}
|
|
|
|
func differenceBitmapArray(a, b *Container) *Container {
|
|
statsHit("difference/BitmapArray")
|
|
output := a.Clone()
|
|
bitmap := output.bitmap()
|
|
|
|
for _, v := range b.array() {
|
|
if output.bitmapContains(v) {
|
|
bitmap[v/64] &^= (uint64(1) << uint(v%64))
|
|
output.n--
|
|
}
|
|
}
|
|
if output.n < ArrayMaxSize {
|
|
output.bitmapToArray()
|
|
}
|
|
return output
|
|
}
|
|
|
|
func differenceBitmapBitmap(a, b *Container) *Container {
|
|
statsHit("difference/BitmapBitmap")
|
|
// local variables added to prevent BCE checks in loop
|
|
// see https://go101.org/article/bounds-check-elimination.html
|
|
|
|
var (
|
|
ab = a.bitmap()[:bitmapN]
|
|
bb = b.bitmap()[:bitmapN]
|
|
ob = make([]uint64, bitmapN)[:bitmapN]
|
|
|
|
n int32
|
|
)
|
|
|
|
for i := 0; i < bitmapN; i++ {
|
|
ob[i] = ab[i] & (^bb[i])
|
|
n += int32(popcount(ob[i]))
|
|
}
|
|
|
|
output := NewContainerBitmap(n, ob)
|
|
if output.n < ArrayMaxSize {
|
|
output.bitmapToArray()
|
|
}
|
|
return output
|
|
}
|
|
|
|
func xor(a, b *Container) *Container {
|
|
if a.isArray() {
|
|
if b.isArray() {
|
|
return xorArrayArray(a, b)
|
|
} else if b.isRun() {
|
|
return xorArrayRun(a, b)
|
|
} else {
|
|
return xorArrayBitmap(a, b)
|
|
}
|
|
} else if a.isRun() {
|
|
if b.isArray() {
|
|
return xorArrayRun(b, a)
|
|
} else if b.isRun() {
|
|
return xorRunRun(a, b)
|
|
} else {
|
|
return xorBitmapRun(b, a)
|
|
}
|
|
} else {
|
|
if b.isArray() {
|
|
return xorArrayBitmap(b, a)
|
|
} else if b.isRun() {
|
|
return xorBitmapRun(a, b)
|
|
} else {
|
|
return xorBitmapBitmap(a, b)
|
|
}
|
|
}
|
|
}
|
|
|
|
func xorArrayArray(a, b *Container) *Container {
|
|
statsHit("xor/ArrayArray")
|
|
output := NewContainerArray(nil)
|
|
aa, ab := a.array(), b.array()
|
|
na, nb := len(aa), len(ab)
|
|
for i, j := 0, 0; i < na || j < nb; {
|
|
if i < na && j >= nb {
|
|
output.add(aa[i])
|
|
i++
|
|
continue
|
|
} else if i >= na && j < nb {
|
|
output.add(ab[j])
|
|
j++
|
|
continue
|
|
}
|
|
|
|
va, vb := aa[i], ab[j]
|
|
if va < vb {
|
|
output.add(va)
|
|
i++
|
|
} else if va > vb {
|
|
output.add(vb)
|
|
j++
|
|
} else { //==
|
|
i++
|
|
j++
|
|
}
|
|
}
|
|
return output
|
|
}
|
|
|
|
func xorArrayBitmap(a, b *Container) *Container {
|
|
statsHit("xor/ArrayBitmap")
|
|
output := b.Clone()
|
|
for _, v := range a.array() {
|
|
if b.bitmapContains(v) {
|
|
output.remove(v)
|
|
} else {
|
|
output.add(v)
|
|
}
|
|
}
|
|
|
|
// It's possible that output was converted from bitmap to array in output.remove()
|
|
// so we only do this conversion if output is still a bitmap container.
|
|
if output.typ == containerBitmap && output.count() < ArrayMaxSize {
|
|
output.bitmapToArray()
|
|
}
|
|
|
|
return output
|
|
}
|
|
|
|
func xorBitmapBitmap(a, b *Container) *Container {
|
|
statsHit("xor/BitmapBitmap")
|
|
// local variables added to prevent BCE checks in loop
|
|
// see https://go101.org/article/bounds-check-elimination.html
|
|
|
|
var (
|
|
ab = a.bitmap()[:bitmapN]
|
|
bb = b.bitmap()[:bitmapN]
|
|
ob = make([]uint64, bitmapN)[:bitmapN]
|
|
|
|
n int32
|
|
)
|
|
|
|
for i := 0; i < bitmapN; i++ {
|
|
ob[i] = ab[i] ^ bb[i]
|
|
n += int32(popcount(ob[i]))
|
|
}
|
|
|
|
output := NewContainerBitmap(n, ob)
|
|
if output.count() < ArrayMaxSize {
|
|
output.bitmapToArray()
|
|
}
|
|
return output
|
|
}
|
|
|
|
// shift() shifts the contents of c by one. It returns
|
|
// the new container and a bool indicating whether a
|
|
// carry bit was shifted out.
|
|
func shift(c *Container) (*Container, bool) {
|
|
if c.isArray() {
|
|
return shiftArray(c)
|
|
} else if c.isRun() {
|
|
return shiftRun(c)
|
|
}
|
|
return shiftBitmap(c)
|
|
}
|
|
|
|
// shiftArray is an array-specific implementation of shift().
|
|
func shiftArray(a *Container) (*Container, bool) {
|
|
statsHit("shift/Array")
|
|
carry := false
|
|
aa := a.array()
|
|
output := make([]uint16, 0, len(aa))
|
|
for _, v := range aa {
|
|
if v+1 == 0 { // overflow
|
|
carry = true
|
|
} else {
|
|
output = append(output, v+1)
|
|
}
|
|
}
|
|
return NewContainerArray(output), carry
|
|
}
|
|
|
|
// shiftBitmap is a bitmap-specific implementation of shift().
|
|
func shiftBitmap(a *Container) (*Container, bool) {
|
|
statsHit("shift/Bitmap")
|
|
carry := false
|
|
output := NewContainerBitmap(a.n, nil)
|
|
ba, bo := a.bitmap(), output.bitmap()
|
|
lastCarry := false
|
|
for i, v := range ba {
|
|
carry = (v & (1 << 63)) != 0
|
|
v = v << 1
|
|
if lastCarry {
|
|
v |= 1
|
|
}
|
|
bo[i] = v
|
|
lastCarry = carry
|
|
}
|
|
if carry {
|
|
output.n--
|
|
}
|
|
return output, carry
|
|
}
|
|
|
|
// shiftRun is a run-specific implementation of shift().
|
|
func shiftRun(a *Container) (*Container, bool) {
|
|
statsHit("shift/Run")
|
|
carry := false
|
|
ra := a.runs()
|
|
ro := make([]interval16, 0, len(ra))
|
|
|
|
for _, v := range ra {
|
|
if v.start+1 == 0 { // final run was 1 bit on container edge
|
|
carry = true
|
|
break
|
|
} else if v.last+1 == 0 { // final run ends on container edge
|
|
v.start++
|
|
carry = true
|
|
} else {
|
|
v.start++
|
|
v.last++
|
|
carry = false
|
|
}
|
|
ro = append(ro, v)
|
|
}
|
|
|
|
return NewContainerRun(ro), carry
|
|
}
|
|
|
|
// opType represents a type of operation.
|
|
type opType uint8
|
|
|
|
const (
|
|
opTypeAdd = opType(0)
|
|
opTypeRemove = opType(1)
|
|
opTypeAddBatch = opType(2)
|
|
opTypeRemoveBatch = opType(3)
|
|
)
|
|
|
|
// op represents an operation on the bitmap.
|
|
type op struct {
|
|
typ opType
|
|
value uint64
|
|
values []uint64
|
|
}
|
|
|
|
// apply executes the operation against a bitmap.
|
|
func (op *op) apply(b *Bitmap) (changed bool) {
|
|
switch op.typ {
|
|
case opTypeAdd:
|
|
return b.DirectAdd(op.value)
|
|
case opTypeRemove:
|
|
return b.remove(op.value)
|
|
case opTypeAddBatch:
|
|
changed = b.DirectAddN(op.values...) > 0
|
|
case opTypeRemoveBatch:
|
|
changed = b.DirectRemoveN(op.values...) > 0
|
|
default:
|
|
panic(fmt.Sprintf("invalid op type: %d", op.typ))
|
|
}
|
|
return changed
|
|
}
|
|
|
|
// WriteTo writes op to the w.
|
|
func (op *op) WriteTo(w io.Writer) (n int64, err error) {
|
|
buf := make([]byte, op.size())
|
|
|
|
// Write type and value.
|
|
buf[0] = byte(op.typ)
|
|
if op.typ <= 1 {
|
|
binary.LittleEndian.PutUint64(buf[1:9], op.value)
|
|
} else {
|
|
binary.LittleEndian.PutUint64(buf[1:9], uint64(len(op.values)))
|
|
p := 13 // start of values (skip 4 for checksum)
|
|
for _, v := range op.values {
|
|
binary.LittleEndian.PutUint64(buf[p:p+8], v)
|
|
p += 8
|
|
}
|
|
}
|
|
|
|
// Add checksum at the end.
|
|
h := fnv.New32a()
|
|
h.Write(buf[0:9])
|
|
h.Write(buf[13:])
|
|
binary.LittleEndian.PutUint32(buf[9:13], h.Sum32())
|
|
|
|
// Write to writer.
|
|
nn, err := w.Write(buf)
|
|
return int64(nn), err
|
|
}
|
|
|
|
var minOpSize = 13
|
|
|
|
// UnmarshalBinary decodes data into an op.
|
|
func (op *op) UnmarshalBinary(data []byte) error {
|
|
if len(data) < minOpSize {
|
|
return fmt.Errorf("op data out of bounds: len=%d", len(data))
|
|
}
|
|
statsHit("op/UnmarshalBinary")
|
|
|
|
op.typ = opType(data[0])
|
|
// op.value will actually contain the length of values for batch ops
|
|
op.value = binary.LittleEndian.Uint64(data[1:9])
|
|
|
|
// Verify checksum.
|
|
h := fnv.New32a()
|
|
h.Write(data[0:9])
|
|
|
|
if op.typ > 1 {
|
|
if len(data) < int(13+op.value*8) {
|
|
return fmt.Errorf("op data truncated - expected %d, got %d", 13+op.value*8, len(data))
|
|
}
|
|
h.Write(data[13 : 13+op.value*8])
|
|
op.values = make([]uint64, op.value)
|
|
for i := uint64(0); i < op.value; i++ {
|
|
start := 13 + i*8
|
|
op.values[i] = binary.LittleEndian.Uint64(data[start : start+8])
|
|
}
|
|
op.value = 0
|
|
}
|
|
if chk := binary.LittleEndian.Uint32(data[9:13]); chk != h.Sum32() {
|
|
return fmt.Errorf("checksum mismatch: exp=%08x, got=%08x", h.Sum32(), chk)
|
|
}
|
|
|
|
return nil
|
|
}
|
|
|
|
// size returns the encoded size of the op, in bytes.
|
|
func (op *op) size() int {
|
|
if op.typ == opTypeAdd || op.typ == opTypeRemove {
|
|
return 1 + 8 + 4
|
|
}
|
|
return 1 + 8 + 4 + len(op.values)*8
|
|
}
|
|
|
|
// count returns the number of bits the operation mutates.
|
|
func (op *op) count() int {
|
|
switch op.typ {
|
|
case 0, 1:
|
|
return 1
|
|
case 2, 3:
|
|
return len(op.values)
|
|
default:
|
|
panic(fmt.Sprintf("unknown operation type: %d", op.typ))
|
|
}
|
|
}
|
|
|
|
func highbits(v uint64) uint64 { return v >> 16 }
|
|
func lowbits(v uint64) uint16 { return uint16(v & 0xFFFF) }
|
|
|
|
// search32 returns the index of value in a. If value is not found, it works the
|
|
// same way as search64.
|
|
func search32(a []uint16, value uint16) int32 {
|
|
statsHit("search32")
|
|
// Optimize for elements and the last element.
|
|
n := int32(len(a))
|
|
if n == 0 {
|
|
return -1
|
|
} else if a[n-1] == value {
|
|
return n - 1
|
|
}
|
|
|
|
// Otherwise perform binary search for exact match.
|
|
lo, hi := int32(0), n-1
|
|
for lo+16 <= hi {
|
|
i := int32(uint((lo + hi)) >> 1)
|
|
v := a[i]
|
|
|
|
if v < value {
|
|
lo = i + 1
|
|
} else if v > value {
|
|
hi = i - 1
|
|
} else {
|
|
return i
|
|
}
|
|
}
|
|
|
|
// If an exact match isn't found then return a negative index.
|
|
for ; lo <= hi; lo++ {
|
|
v := a[lo]
|
|
if v == value {
|
|
return lo
|
|
} else if v > value {
|
|
break
|
|
}
|
|
}
|
|
return -(lo + 1)
|
|
}
|
|
|
|
// search64 returns the index of value in a. If value is not found, -1 * (1 +
|
|
// the index where v would be if it were inserted) is returned. This is done in
|
|
// order to both signal that value was not found (negative number), and also
|
|
// return information about where v would go if it were inserted. The +1 offset
|
|
// is necessary due to the case where v is not found, but would go at index 0.
|
|
// since negative 0 is no different from positive 0, we offset the returned
|
|
// negative indices by 1. See the test for this function for examples.
|
|
func search64(a []uint64, value uint64) int {
|
|
statsHit("search64")
|
|
// Optimize for elements and the last element.
|
|
n := len(a)
|
|
if n == 0 {
|
|
return -1
|
|
} else if a[n-1] == value {
|
|
return n - 1
|
|
}
|
|
|
|
// Otherwise perform binary search for exact match.
|
|
lo, hi := 0, n-1
|
|
for lo+16 <= hi {
|
|
i := int(uint((lo + hi)) >> 1)
|
|
v := a[i]
|
|
|
|
if v < value {
|
|
lo = i + 1
|
|
} else if v > value {
|
|
hi = i - 1
|
|
} else {
|
|
return i
|
|
}
|
|
}
|
|
|
|
// If an exact match isn't found then return a negative index.
|
|
for ; lo <= hi; lo++ {
|
|
v := a[lo]
|
|
if v == value {
|
|
return lo
|
|
} else if v > value {
|
|
break
|
|
}
|
|
}
|
|
return -(lo + 1)
|
|
}
|
|
|
|
// trailingZeroN returns the number of trailing zeros in v.
|
|
// v must be greater than zero.
|
|
func trailingZeroN(v uint64) int {
|
|
return bits.TrailingZeros64(v)
|
|
}
|
|
|
|
// ErrorList represents a list of errors.
|
|
type ErrorList []error
|
|
|
|
func (a ErrorList) Error() string {
|
|
switch len(a) {
|
|
case 0:
|
|
return "no errors"
|
|
case 1:
|
|
return a[0].Error()
|
|
}
|
|
return fmt.Sprintf("%s (and %d more errors)", a[0], len(a)-1)
|
|
}
|
|
|
|
// Append appends an error to the list. If err is an ErrorList then all errors are appended.
|
|
func (a *ErrorList) Append(err error) {
|
|
switch err := err.(type) {
|
|
case ErrorList:
|
|
*a = append(*a, err...)
|
|
default:
|
|
*a = append(*a, err)
|
|
}
|
|
}
|
|
|
|
// AppendWithPrefix appends an error to the list and includes a prefix.
|
|
func (a *ErrorList) AppendWithPrefix(err error, prefix string) {
|
|
switch err := err.(type) {
|
|
case ErrorList:
|
|
for i := range err {
|
|
*a = append(*a, fmt.Errorf("%s%s", prefix, err[i]))
|
|
}
|
|
default:
|
|
*a = append(*a, fmt.Errorf("%s%s", prefix, err))
|
|
}
|
|
}
|
|
|
|
// xorArrayRun computes the exclusive or of an array and a run container.
|
|
func xorArrayRun(a, b *Container) *Container {
|
|
statsHit("xor/ArrayRun")
|
|
output := NewContainerRun(nil)
|
|
aa, rb := a.array(), b.runs()
|
|
na, nb := len(aa), len(rb)
|
|
var vb interval16
|
|
var va uint16
|
|
lastI, lastJ := -1, -1
|
|
for i, j := 0, 0; i < na || j < nb; {
|
|
if i < na && i != lastI {
|
|
va = aa[i]
|
|
}
|
|
if j < nb && j != lastJ {
|
|
vb = rb[j]
|
|
}
|
|
lastI = i
|
|
lastJ = j
|
|
|
|
if i < na && (j >= nb || va < vb.start) { //before
|
|
output.n += output.runAppendInterval(interval16{start: va, last: va})
|
|
i++
|
|
} else if j < nb && (i >= na || va > vb.last) { //after
|
|
output.n += output.runAppendInterval(vb)
|
|
j++
|
|
} else if va > vb.start {
|
|
if va < vb.last {
|
|
output.n += output.runAppendInterval(interval16{start: vb.start, last: va - 1})
|
|
i++
|
|
vb.start = va + 1
|
|
|
|
if vb.start > vb.last {
|
|
j++
|
|
}
|
|
} else if va > vb.last {
|
|
output.n += output.runAppendInterval(vb)
|
|
j++
|
|
} else { // va == vb.last
|
|
vb.last--
|
|
if vb.start <= vb.last {
|
|
output.n += output.runAppendInterval(vb)
|
|
}
|
|
j++
|
|
i++
|
|
}
|
|
|
|
} else { // we know va == vb.start
|
|
if vb.start == maxContainerVal { // protect overflow
|
|
j++
|
|
} else {
|
|
vb.start++
|
|
if vb.start > vb.last {
|
|
j++
|
|
}
|
|
}
|
|
i++
|
|
}
|
|
}
|
|
if output.n < ArrayMaxSize {
|
|
output.runToArray()
|
|
} else if len(output.runs()) > runMaxSize {
|
|
output.runToBitmap()
|
|
}
|
|
return output
|
|
}
|
|
|
|
// xorCompare computes first exclusive run between two runs.
|
|
func xorCompare(x *xorstm) (r1 interval16, hasData bool) {
|
|
hasData = false
|
|
if !x.vaValid || !x.vbValid {
|
|
if x.vbValid {
|
|
x.vbValid = false
|
|
return x.vb, true
|
|
}
|
|
if x.vaValid {
|
|
x.vaValid = false
|
|
return x.va, true
|
|
}
|
|
return r1, false
|
|
}
|
|
|
|
if x.va.last < x.vb.start { //va before
|
|
x.vaValid = false
|
|
r1 = x.va
|
|
hasData = true
|
|
} else if x.vb.last < x.va.start { //vb before
|
|
x.vbValid = false
|
|
r1 = x.vb
|
|
hasData = true
|
|
} else if x.va.start == x.vb.start && x.va.last == x.vb.last { // Equal
|
|
x.vaValid = false
|
|
x.vbValid = false
|
|
} else if x.va.start <= x.vb.start && x.va.last >= x.vb.last { //vb inside
|
|
x.vbValid = false
|
|
if x.va.start != x.vb.start {
|
|
r1 = interval16{start: x.va.start, last: x.vb.start - 1}
|
|
hasData = true
|
|
}
|
|
|
|
if x.vb.last == maxContainerVal { // Check for overflow
|
|
x.vaValid = false
|
|
|
|
} else {
|
|
x.va.start = x.vb.last + 1
|
|
if x.va.start > x.va.last {
|
|
x.vaValid = false
|
|
}
|
|
}
|
|
|
|
} else if x.vb.start <= x.va.start && x.vb.last >= x.va.last { //va inside
|
|
x.vaValid = false
|
|
if x.vb.start != x.va.start {
|
|
r1 = interval16{start: x.vb.start, last: x.va.start - 1}
|
|
hasData = true
|
|
}
|
|
|
|
if x.va.last == maxContainerVal { //check for overflow
|
|
x.vbValid = false
|
|
} else {
|
|
x.vb.start = x.va.last + 1
|
|
if x.vb.start > x.vb.last {
|
|
x.vbValid = false
|
|
}
|
|
}
|
|
|
|
} else if x.va.start < x.vb.start && x.va.last <= x.vb.last { //va first overlap
|
|
x.vaValid = false
|
|
r1 = interval16{start: x.va.start, last: x.vb.start - 1}
|
|
hasData = true
|
|
if x.va.last == maxContainerVal { // check for overflow
|
|
x.vbValid = false
|
|
} else {
|
|
x.vb.start = x.va.last + 1
|
|
if x.vb.start > x.vb.last {
|
|
x.vbValid = false
|
|
}
|
|
}
|
|
} else if x.vb.start < x.va.start && x.vb.last <= x.va.last { //vb first overlap
|
|
x.vbValid = false
|
|
r1 = interval16{start: x.vb.start, last: x.va.start - 1}
|
|
hasData = true
|
|
|
|
if x.vb.last == maxContainerVal { // check for overflow
|
|
x.vaValid = false
|
|
} else {
|
|
x.va.start = x.vb.last + 1
|
|
if x.va.start > x.va.last {
|
|
x.vaValid = false
|
|
}
|
|
}
|
|
}
|
|
return r1, hasData
|
|
}
|
|
|
|
//stm is state machine used to "xor" iterate over runs.
|
|
type xorstm struct {
|
|
vaValid, vbValid bool
|
|
va, vb interval16
|
|
}
|
|
|
|
// xorRunRun computes the exclusive or of two run containers.
|
|
func xorRunRun(a, b *Container) *Container {
|
|
statsHit("xor/RunRun")
|
|
ra, rb := a.runs(), b.runs()
|
|
na, nb := len(ra), len(rb)
|
|
if na == 0 {
|
|
return b.Clone()
|
|
}
|
|
if nb == 0 {
|
|
return a.Clone()
|
|
}
|
|
output := NewContainerRun(nil)
|
|
|
|
lastI, lastJ := -1, -1
|
|
|
|
state := &xorstm{}
|
|
|
|
for i, j := 0, 0; i < na || j < nb; {
|
|
if i < na && lastI != i {
|
|
state.va = ra[i]
|
|
state.vaValid = true
|
|
}
|
|
|
|
if j < nb && lastJ != j {
|
|
state.vb = rb[j]
|
|
state.vbValid = true
|
|
}
|
|
lastI, lastJ = i, j
|
|
|
|
r1, ok := xorCompare(state)
|
|
if ok {
|
|
output.n += output.runAppendInterval(r1)
|
|
}
|
|
if !state.vaValid {
|
|
i++
|
|
}
|
|
if !state.vbValid {
|
|
j++
|
|
}
|
|
|
|
}
|
|
|
|
l := len(output.runs())
|
|
if output.n < ArrayMaxSize && int32(l) > output.n/2 {
|
|
output.runToArray()
|
|
} else if l > runMaxSize {
|
|
output.runToBitmap()
|
|
}
|
|
return output
|
|
}
|
|
|
|
// xorRunRun computes the exclusive or of a bitmap and a run container.
|
|
func xorBitmapRun(a, b *Container) *Container {
|
|
statsHit("xor/BitmapRun")
|
|
output := a.Clone()
|
|
|
|
for _, run := range b.runs() {
|
|
output.bitmapXorRange(uint64(run.start), uint64(run.last)+1)
|
|
}
|
|
|
|
return output
|
|
}
|
|
|
|
func bitmapsEqual(b, c *Bitmap) error { // nolint: deadcode
|
|
statsHit("bitmapsEqual")
|
|
if b.OpWriter != c.OpWriter {
|
|
return errors.New("opWriters not equal")
|
|
}
|
|
if b.opN != c.opN {
|
|
return errors.New("opNs not equal")
|
|
}
|
|
|
|
biter, _ := b.Containers.Iterator(0)
|
|
citer, _ := c.Containers.Iterator(0)
|
|
bn, cn := biter.Next(), citer.Next()
|
|
for ; bn && cn; bn, cn = biter.Next(), citer.Next() {
|
|
bk, bc := biter.Value()
|
|
ck, cc := citer.Value()
|
|
if bk != ck {
|
|
return errors.New("keys not equal")
|
|
}
|
|
if !bc.equals(cc) {
|
|
return errors.New("containers not equal")
|
|
}
|
|
}
|
|
if bn && !cn || cn && !bn {
|
|
return errors.New("different numbers of containers")
|
|
}
|
|
|
|
return nil
|
|
}
|
|
|
|
func popcount(x uint64) uint64 {
|
|
return uint64(bits.OnesCount64(x))
|
|
}
|
|
|
|
func popcountAndSlice(s, m []uint64) uint64 {
|
|
var (
|
|
a = s[:bitmapN]
|
|
b = m[:bitmapN]
|
|
)
|
|
|
|
cnt := uint64(0)
|
|
for i := 0; i < bitmapN; i++ {
|
|
cnt += popcount(a[i] & b[i])
|
|
}
|
|
return cnt
|
|
}
|
|
|
|
// constants from github.com/RoaringBitmap/roaring
|
|
// taken from roaring/util.go
|
|
const (
|
|
serialCookieNoRunContainer = 12346 // only arrays and bitmaps
|
|
serialCookie = 12347 // runs, arrays, and bitmaps
|
|
)
|
|
|
|
func readOfficialHeader(buf []byte) (size uint32, containerTyper func(index uint, card int) byte, header, pos int, haveRuns bool, err error) {
|
|
statsHit("readOfficialHeader")
|
|
if len(buf) < 8 {
|
|
err = fmt.Errorf("buffer too small, expecting at least 8 bytes, was %d", len(buf))
|
|
return size, containerTyper, header, pos, haveRuns, err
|
|
}
|
|
cf := func(index uint, card int) (newType byte) {
|
|
newType = containerBitmap
|
|
if card < ArrayMaxSize {
|
|
newType = containerArray
|
|
}
|
|
return newType
|
|
}
|
|
containerTyper = cf
|
|
cookie := binary.LittleEndian.Uint32(buf)
|
|
pos += 4
|
|
|
|
// cookie header
|
|
if cookie == serialCookieNoRunContainer {
|
|
size = binary.LittleEndian.Uint32(buf[pos:])
|
|
pos += 4
|
|
} else if cookie&0x0000FFFF == serialCookie {
|
|
haveRuns = true
|
|
size = uint32(uint16(cookie>>16) + 1) // number of containers
|
|
|
|
// create is-run-container bitmap
|
|
isRunBitmapSize := (int(size) + 7) / 8
|
|
if pos+isRunBitmapSize > len(buf) {
|
|
err = fmt.Errorf("malformed bitmap, is-run bitmap overruns buffer at %d", pos+isRunBitmapSize)
|
|
return size, containerTyper, header, pos, haveRuns, err
|
|
}
|
|
|
|
isRunBitmap := buf[pos : pos+isRunBitmapSize]
|
|
pos += isRunBitmapSize
|
|
containerTyper = func(index uint, card int) byte {
|
|
if isRunBitmap[index/8]&(1<<(index%8)) != 0 {
|
|
return containerRun
|
|
}
|
|
return cf(index, card)
|
|
}
|
|
} else {
|
|
err = fmt.Errorf("did not find expected serialCookie in header")
|
|
return size, containerTyper, header, pos, haveRuns, err
|
|
}
|
|
|
|
header = pos
|
|
if size > (1 << 16) {
|
|
err = fmt.Errorf("it is logically impossible to have more than (1<<16) containers")
|
|
return size, containerTyper, header, pos, haveRuns, err
|
|
}
|
|
|
|
// descriptive header
|
|
if pos+2*2*int(size) > len(buf) {
|
|
err = fmt.Errorf("malformed bitmap, key-cardinality slice overruns buffer at %d", pos+2*2*int(size))
|
|
return size, containerTyper, header, pos, haveRuns, err
|
|
}
|
|
pos += 2 * 2 * int(size) // moving pos past keycount
|
|
return size, containerTyper, header, pos, haveRuns, err
|
|
}
|
|
|
|
// UnmarshalBinary decodes b from a binary-encoded byte slice. data can be in
|
|
// either official roaring format or Pilosa's roaring format.
|
|
func (b *Bitmap) UnmarshalBinary(data []byte) error {
|
|
if data == nil {
|
|
// Nothing to unmarshal
|
|
return nil
|
|
}
|
|
statsHit("Bitmap/UnmarshalBinary")
|
|
b.opN = 0 // reset opN since we're reading new data.
|
|
fileMagic := uint32(binary.LittleEndian.Uint16(data[0:2]))
|
|
if fileMagic == MagicNumber { // if pilosa roaring
|
|
return errors.Wrap(b.unmarshalPilosaRoaring(data), "unmarshaling as pilosa roaring")
|
|
}
|
|
|
|
keyN, containerTyper, header, pos, haveRuns, err := readOfficialHeader(data)
|
|
if err != nil {
|
|
return errors.Wrap(err, "reading roaring header")
|
|
}
|
|
|
|
b.Containers.Reset()
|
|
// Descriptive header section: Read container keys and cardinalities.
|
|
for i, buf := uint(0), data[header:]; i < uint(keyN); i, buf = i+1, buf[4:] {
|
|
card := int(binary.LittleEndian.Uint16(buf[2:4])) + 1
|
|
b.Containers.PutContainerValues(
|
|
uint64(binary.LittleEndian.Uint16(buf[0:2])),
|
|
containerTyper(i, card), /// container type voodo with isRunBitmap
|
|
card,
|
|
true)
|
|
}
|
|
|
|
// Read container offsets and attach data.
|
|
if haveRuns {
|
|
readWithRuns(b, data, pos, keyN)
|
|
} else {
|
|
err := readOffsets(b, data, pos, keyN)
|
|
if err != nil {
|
|
return errors.Wrap(err, "reading offsets from official roaring format")
|
|
}
|
|
}
|
|
return nil
|
|
}
|
|
|
|
func readOffsets(b *Bitmap, data []byte, pos int, keyN uint32) error {
|
|
|
|
citer, _ := b.Containers.Iterator(0)
|
|
for i, buf := 0, data[pos:]; i < int(keyN); i, buf = i+1, buf[4:] {
|
|
offset := binary.LittleEndian.Uint32(buf[0:4])
|
|
// Verify the offset is within the bounds of the input data.
|
|
if int(offset) >= len(data) {
|
|
return fmt.Errorf("offset out of bounds: off=%d, len=%d", offset, len(data))
|
|
}
|
|
|
|
// Map byte slice directly to the container data.
|
|
citer.Next()
|
|
_, c := citer.Value()
|
|
switch c.typ {
|
|
case containerArray:
|
|
c.setArray((*[0xFFFFFFF]uint16)(unsafe.Pointer(&data[offset]))[:c.n:c.n])
|
|
case containerBitmap:
|
|
c.setBitmap((*[0xFFFFFFF]uint64)(unsafe.Pointer(&data[offset]))[:bitmapN:bitmapN])
|
|
default:
|
|
return fmt.Errorf("unsupported container type %d", c.typ)
|
|
}
|
|
}
|
|
return nil
|
|
}
|
|
|
|
func readWithRuns(b *Bitmap, data []byte, pos int, keyN uint32) {
|
|
citer, _ := b.Containers.Iterator(0)
|
|
for i := 0; i < int(keyN); i++ {
|
|
citer.Next()
|
|
_, c := citer.Value()
|
|
switch c.typ {
|
|
case containerRun:
|
|
runCount := binary.LittleEndian.Uint16(data[pos : pos+runCountHeaderSize])
|
|
c.setRuns((*[0xFFFFFFF]interval16)(unsafe.Pointer(&data[pos+runCountHeaderSize]))[:runCount:runCount])
|
|
runs := c.runs()
|
|
|
|
for o := range runs { // must convert from start:length to start:end :(
|
|
runs[o].last = runs[o].start + runs[o].last
|
|
}
|
|
pos += int((runCount * interval16Size) + runCountHeaderSize)
|
|
case containerArray:
|
|
c.setArray((*[0xFFFFFFF]uint16)(unsafe.Pointer(&data[pos]))[:c.n:c.n])
|
|
pos += int(c.n * 2)
|
|
case containerBitmap:
|
|
c.setBitmap((*[0xFFFFFFF]uint64)(unsafe.Pointer(&data[pos]))[:bitmapN:bitmapN])
|
|
pos += bitmapN * 8
|
|
}
|
|
}
|
|
}
|
|
|
|
// handledIter and handledIters are wrappers around Bitmap Container iterators
|
|
// and assist with the unionIntoTarget algorithm by abstracting away some tedious
|
|
// operations.
|
|
type handledIter struct {
|
|
iter ContainerIterator
|
|
hasNext bool
|
|
handled bool
|
|
}
|
|
|
|
type handledIters []handledIter
|
|
|
|
func (w handledIters) next() bool {
|
|
hasNext := false
|
|
|
|
for i, wrapped := range w {
|
|
next := wrapped.iter.Next()
|
|
w[i].hasNext = next
|
|
w[i].handled = false
|
|
if next {
|
|
hasNext = true
|
|
}
|
|
}
|
|
|
|
return hasNext
|
|
}
|
|
|
|
// Check all the iters from startIdx and up to see whether their next
|
|
// key is the given key; if it is, mark them as handled.
|
|
func (w handledIters) markItersWithKeyAsHandled(startIdx int, key uint64) {
|
|
for i := startIdx; i < len(w); i++ {
|
|
wrapped := w[i]
|
|
currKey, _ := wrapped.iter.Value()
|
|
if currKey == key {
|
|
w[i].handled = true
|
|
}
|
|
}
|
|
}
|
|
|
|
func (w handledIters) calculateSummaryStats(key uint64) containerUnionSummaryStats {
|
|
summary := containerUnionSummaryStats{}
|
|
|
|
for _, iter := range w {
|
|
// Calculate key-level statistics here
|
|
currKey, currContainer := iter.iter.Value()
|
|
|
|
if key == currKey {
|
|
summary.c++
|
|
summary.n += int64(currContainer.n)
|
|
|
|
if currContainer.n == maxContainerVal+1 {
|
|
summary.hasMaxRange = true
|
|
summary.n = maxContainerVal + 1
|
|
return summary
|
|
}
|
|
}
|
|
}
|
|
|
|
return summary
|
|
}
|
|
|
|
// Summary statistics about all the containers in the other bitmaps
|
|
// that share the same key so we can make smarter union strategy
|
|
// decisions.
|
|
type containerUnionSummaryStats struct {
|
|
// Estimated cardinality of the union of all containers with the same
|
|
// key across all bitmaps. This calculation is very rough as we just sum
|
|
// the cardinality of the container across the different bitmaps which could
|
|
// result in very inflated values, but it allows us to avoid allocating
|
|
// expensive bitmaps when unioning many low density containers.
|
|
n int64
|
|
// Containers found with this key. May be inaccurate if hasMaxRange is true.
|
|
c int
|
|
// Whether any of the containers with the specified keys are storing every possible
|
|
// value that they can. If so, we can short-circuit all the unioning logic and use
|
|
// a RLE container with a single value in it. This is an optimization to
|
|
// avoid using an expensive bitmap container for bitmaps that have some
|
|
// extremely dense containers.
|
|
hasMaxRange bool
|
|
}
|