mirror of
https://github.com/featurebasedb/featurebase.git
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* adding more error handling for rbf
Co-authored-by: Jacob Brinlee <jacobbrinlee@Jacobs-MBP.attlocal.net>
(cherry picked from commit c9ce26ce96)
306 lines
7.5 KiB
Go
306 lines
7.5 KiB
Go
// Copyright 2022 Molecula Corp. (DBA FeatureBase).
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// SPDX-License-Identifier: Apache-2.0
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package rbf
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import (
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"bufio"
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"fmt"
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"io"
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"math"
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"os"
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"github.com/featurebasedb/featurebase/v3/roaring"
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"github.com/pkg/errors"
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)
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// probably should just implement the container interface
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// but for now i'll do it
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func (c *Cursor) Rows() ([]uint64, error) {
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shardVsContainerExponent := uint(4) // needs constant exported from roaring package
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rows := make([]uint64, 0)
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if err := c.First(); err != nil {
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if err == io.EOF { // root leaf with no elements
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return rows, nil
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}
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return nil, errors.Wrap(err, "rows")
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}
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var err error
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var lastRow uint64 = math.MaxUint64
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for {
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err := c.Next()
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if err != nil {
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break
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}
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elem := &c.stack.elems[c.stack.top]
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leafPage, _, err := c.tx.readPage(elem.pgno)
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if err != nil {
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return nil, err
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}
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cell := readLeafCell(leafPage, elem.index)
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vRow := cell.Key >> shardVsContainerExponent
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if vRow == lastRow {
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continue
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}
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rows = append(rows, vRow)
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lastRow = vRow
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}
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return rows, err
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}
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func (tx *Tx) FieldViews() []string {
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records, _ := tx.RootRecords()
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a := make([]string, 0, records.Len())
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for itr := records.Iterator(); !itr.Done(); {
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name, _, _ := itr.Next()
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a = append(a, name)
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}
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return a
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}
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func (c *Cursor) DumpKeys() {
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if err := c.First(); err != nil {
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// ignoring errors for this debug function
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return
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}
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for {
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err := c.Next()
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if err == io.EOF {
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break
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}
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elem := &c.stack.elems[c.stack.top]
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leafPage, _, err := c.tx.readPage(elem.pgno)
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if err != nil {
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return
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}
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cell := readLeafCell(leafPage, elem.index)
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fmt.Println("key", cell.Key)
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}
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}
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func (c *Cursor) DumpStack() {
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fmt.Println("STACK")
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for i := c.stack.top; i >= 0; i-- {
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fmt.Printf("%+v\n", c.stack.elems[i])
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}
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fmt.Println()
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}
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func (c *Cursor) Dump(name string) {
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writer, _ := os.Create(name)
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defer writer.Close()
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bufStdout := bufio.NewWriter(writer)
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fmt.Fprintf(bufStdout, "digraph RBF{\n")
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fmt.Fprintf(bufStdout, "rankdir=\"LR\"\n")
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fmt.Fprintf(bufStdout, "node [shape=record height=.1]\n")
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Dumpdot(c.tx, 0, " ", bufStdout)
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fmt.Fprintf(bufStdout, "\n}")
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bufStdout.Flush()
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}
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func (c *Cursor) Row(shard, rowID uint64) (*roaring.Bitmap, error) {
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base := rowID * ShardWidth
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offset := uint64(shard * ShardWidth)
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off := highbits(offset)
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hi0, hi1 := highbits(base), highbits((rowID+1)*ShardWidth)
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c.stack.top = 0
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ok, err := c.Seek(hi0)
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if err != nil {
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return nil, err
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}
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if !ok {
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elem := &c.stack.elems[c.stack.top]
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leafPage, _, err := c.tx.readPage(elem.pgno)
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if err != nil {
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return nil, err
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}
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n := readCellN(leafPage)
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if elem.index >= n {
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if err := c.goNextPage(); err != nil {
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return nil, errors.Wrap(err, "row")
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}
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}
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}
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other := roaring.NewSliceBitmap()
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for {
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err := c.Next()
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if err == io.EOF {
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break
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} else if err != nil {
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return nil, err
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}
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elem := &c.stack.elems[c.stack.top]
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leafPage, _, err := c.tx.readPage(elem.pgno)
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if err != nil {
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return nil, err
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}
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cell := readLeafCell(leafPage, elem.index)
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if cell.Key >= hi1 {
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break
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}
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other.Containers.Put(off+(cell.Key-hi0), toContainer(cell, c.tx))
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}
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return other, nil
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}
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// CurrentPageType returns the type of the container currently pointed to by cursor used in testing
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// sometimes the cursor needs to be positions prior to this call with First/Last etc.
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func (c *Cursor) CurrentPageType() ContainerType {
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elem := &c.stack.elems[c.stack.top]
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leafPage, _, _ := c.tx.readPage(elem.pgno)
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cell := readLeafCell(leafPage, elem.index)
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return cell.Type
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}
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func intoContainer(l leafCell, tx *Tx, replacing *roaring.Container, target []byte) (c *roaring.Container) {
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if len(l.Data) == 0 {
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return nil
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}
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orig := l.Data
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var cpMaybe []byte
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var mapped bool
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if tx.db.cfg.DoAllocZero {
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// make a copy so no one will see corrupted data
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// or mmapped data that may disappear.
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cpMaybe = target[:len(orig)]
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copy(cpMaybe, orig)
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mapped = false
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} else {
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// not a copy
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cpMaybe = orig
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mapped = true
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}
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switch l.Type {
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case ContainerTypeArray:
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c = roaring.RemakeContainerArray(replacing, toArray16(cpMaybe))
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case ContainerTypeBitmapPtr:
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_, bm, _ := tx.leafCellBitmap(toPgno(cpMaybe))
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cloneMaybe := bm
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c = roaring.RemakeContainerBitmapN(replacing, cloneMaybe, int32(l.BitN))
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case ContainerTypeBitmap:
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c = roaring.RemakeContainerBitmapN(replacing, toArray64(cpMaybe), int32(l.BitN))
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case ContainerTypeRLE:
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c = roaring.RemakeContainerRunN(replacing, toInterval16(cpMaybe), int32(l.BitN))
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}
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// Note: If the "roaringparanoia" build tag isn't set, this
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// should be optimized away entirely. Otherwise it's moderately
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// expensive.
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c.CheckN()
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c.SetMapped(mapped)
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return c
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}
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// intoWritableContainer always uses the provided target for a copy of
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// the container's contents, so the container can be modified safely.
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func intoWritableContainer(l leafCell, tx *Tx, replacing *roaring.Container, target []byte) (c *roaring.Container, err error) {
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if len(l.Data) == 0 {
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return nil, nil
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}
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orig := l.Data
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target = target[:len(orig)]
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copy(target, orig)
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switch l.Type {
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case ContainerTypeArray:
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c = roaring.RemakeContainerArray(replacing, toArray16(target))
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case ContainerTypeBitmapPtr:
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pgno := toPgno(target)
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target = target[:PageSize] // reslice back to full size
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_, bm, err := tx.leafCellBitmapInto(pgno, target)
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if err != nil {
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return nil, fmt.Errorf("intoContainer: %s", err)
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}
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c = roaring.RemakeContainerBitmapN(replacing, bm, int32(l.BitN))
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case ContainerTypeBitmap:
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c = roaring.RemakeContainerBitmapN(replacing, toArray64(target), int32(l.BitN))
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case ContainerTypeRLE:
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c = roaring.RemakeContainerRunN(replacing, toInterval16(target), int32(l.BitN))
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}
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// Note: If the "roaringparanoia" build tag isn't set, this
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// should be optimized away entirely. Otherwise it's moderately
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// expensive.
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c.CheckN()
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c.SetMapped(false)
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return c, nil
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}
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func toContainer(l leafCell, tx *Tx) (c *roaring.Container) {
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if len(l.Data) == 0 {
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return nil
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}
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orig := l.Data
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var cpMaybe []byte
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var mapped bool
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if tx.db.cfg.DoAllocZero {
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// make a copy, otherwise someone could see corrupted data
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// or mmapped data that may disappear.
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cpMaybe = make([]byte, len(orig))
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copy(cpMaybe, orig)
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mapped = false
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} else {
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// not a copy
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cpMaybe = orig
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mapped = true
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}
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switch l.Type {
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case ContainerTypeArray:
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c = roaring.NewContainerArray(toArray16(cpMaybe))
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case ContainerTypeBitmapPtr:
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_, bm, _ := tx.leafCellBitmap(toPgno(cpMaybe))
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cloneMaybe := bm
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c = roaring.NewContainerBitmap(l.BitN, cloneMaybe)
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case ContainerTypeBitmap:
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c = roaring.NewContainerBitmap(l.BitN, toArray64(cpMaybe))
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case ContainerTypeRLE:
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c = roaring.NewContainerRunN(toInterval16(cpMaybe), int32(l.BitN))
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}
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// Note: If the "roaringparanoia" build tag isn't set, this
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// should be optimized away entirely. Otherwise it's moderately
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// expensive.
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c.CheckN()
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c.SetMapped(mapped)
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return c
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}
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type Nodetype int
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const (
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Branch Nodetype = iota
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Leaf
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Bitmap
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)
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type Walker interface {
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Visitor(pgno uint32, records []*RootRecord)
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VisitRoot(pgno uint32, name string)
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Visit(pgno uint32, n Nodetype)
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}
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func WalkPage(tx *Tx, pgno uint32, walker Walker) {
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page, _, err := tx.readPage(pgno)
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if err != nil {
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panic(err)
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}
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if IsMetaPage(page) {
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Walk(tx, readMetaRootRecordPageNo(page), walker.Visitor)
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return
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}
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// Handle
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switch typ := readFlags(page); typ {
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case PageTypeBranch:
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walker.Visit(pgno, Branch)
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for i, n := 0, readCellN(page); i < n; i++ {
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cell := readBranchCell(page, i)
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WalkPage(tx, cell.ChildPgno, walker)
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}
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case PageTypeLeaf:
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walker.Visit(pgno, Leaf)
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default:
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panic(err)
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}
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}
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