featurebase/sql3/planner/opbulkinsert.go
2022-09-30 11:31:37 -07:00

653 lines
16 KiB
Go

// Copyright 2021 Molecula Corp. All rights reserved.
package planner
import (
"context"
"encoding/csv"
"fmt"
"io"
"log"
"os"
"strconv"
"time"
pilosa "github.com/featurebasedb/featurebase/v3"
"github.com/featurebasedb/featurebase/v3/sql3"
"github.com/featurebasedb/featurebase/v3/sql3/parser"
"github.com/featurebasedb/featurebase/v3/sql3/planner/types"
)
// bulkInsertMappedColumn specifies a mapping from the source
// data to a target column name
type bulkInsertMappedColumn struct {
// source expression
// using an interface for so we have flexibility in data types as format changes
columnSource interface{}
// name of the target column
columnName string
// data type of the target column
columnDataType parser.ExprDataType
}
// bulkInsertOptions contains options for bulk insert
type bulkInsertOptions struct {
// name of the file we're going to read
fileName string
// number of rows in a batch
batchSize int
// stop after this many rows
rowsLimit int
// format specifier (CSV is the only one right now)
format string
// the column map in the source data to use as the _id value
// if empty or nill auto increment
// using an interface so we have flexibility in data types as format changes
idColumnMap []interface{}
// column mappings
columnMap []*bulkInsertMappedColumn
}
// PlanOpBulkInsert plan operator to handle INSERT.
type PlanOpBulkInsert struct {
planner *ExecutionPlanner
tableName string
isKeyed bool
options *bulkInsertOptions
warnings []string
}
func NewPlanOpBulkInsert(p *ExecutionPlanner, tableName string, isKeyed bool, options *bulkInsertOptions) *PlanOpBulkInsert {
return &PlanOpBulkInsert{
planner: p,
tableName: tableName,
isKeyed: isKeyed,
options: options,
warnings: make([]string, 0),
}
}
func (p *PlanOpBulkInsert) Plan() map[string]interface{} {
result := make(map[string]interface{})
result["_op"] = fmt.Sprintf("%T", p)
sc := make([]string, 0)
for _, e := range p.Schema() {
sc = append(sc, fmt.Sprintf("'%s', '%s', '%s'", e.ColumnName, e.RelationName, e.Type.TypeName()))
}
result["_schema"] = sc
result["tableName"] = p.tableName
options := make(map[string]interface{})
options["batchsize"] = p.options.batchSize
options["rowslimit"] = p.options.rowsLimit
options["format"] = p.options.format
if len(p.options.idColumnMap) > 0 {
options["idColumnMap"] = p.options.idColumnMap
} else {
options["idColumnMap"] = "autoincrement"
}
colMap := make([]interface{}, 0)
for _, m := range p.options.columnMap {
cm := make(map[string]interface{})
cm["columnSource"] = m.columnSource
cm["columnName"] = m.columnName
colMap = append(colMap, cm)
}
options["columnMap"] = colMap
result["options"] = options
return result
}
func (p *PlanOpBulkInsert) String() string {
return ""
}
func (p *PlanOpBulkInsert) AddWarning(warning string) {
p.warnings = append(p.warnings, warning)
}
func (p *PlanOpBulkInsert) Warnings() []string {
return p.warnings
}
func (p *PlanOpBulkInsert) Schema() types.Schema {
return types.Schema{}
}
func (p *PlanOpBulkInsert) Children() []types.PlanOperator {
return []types.PlanOperator{}
}
func (p *PlanOpBulkInsert) Iterator(ctx context.Context, row types.Row) (types.RowIterator, error) {
return &bulkInsertCSVRowIter{
planner: p.planner,
tableName: p.tableName,
isKeyed: p.isKeyed,
options: p.options,
}, nil
}
func (p *PlanOpBulkInsert) WithChildren(children ...types.PlanOperator) (types.PlanOperator, error) {
return NewPlanOpBulkInsert(p.planner, p.tableName, p.isKeyed, p.options), nil
}
type bulkInsertCSVRowIter struct {
planner *ExecutionPlanner
tableName string
isKeyed bool
options *bulkInsertOptions
latch *struct{}
currentBatch []interface{}
lastKeyValue uint64
}
var _ types.RowIterator = (*bulkInsertCSVRowIter)(nil)
func (i *bulkInsertCSVRowIter) Next(ctx context.Context) (types.Row, error) {
if i.latch == nil {
i.latch = &struct{}{}
i.lastKeyValue = 0
f, err := os.Open(i.options.fileName)
if err != nil {
return nil, err
}
defer f.Close()
linesRead := 0
csvReader := csv.NewReader(f)
for {
rec, err := csvReader.Read()
if err == io.EOF {
break
}
if err != nil {
return nil, err
}
// do something with read line
err = i.processCSVLine(ctx, rec)
if err != nil {
return nil, err
}
linesRead += 1
// bail if we have a rows limit and we've hit it
if i.options.rowsLimit > 0 && linesRead >= i.options.rowsLimit {
break
}
}
}
return nil, types.ErrNoMoreRows
}
func (i *bulkInsertCSVRowIter) processCSVLine(ctx context.Context, line []string) error {
if i.currentBatch == nil {
i.currentBatch = make([]interface{}, 0)
}
i.currentBatch = append(i.currentBatch, line)
if len(i.currentBatch) >= i.options.batchSize {
log.Printf("BULK INSERT: processing batch (%d)", len(i.currentBatch))
err := i.processBatch(ctx)
log.Printf("BULK INSERT: batch processed")
if err != nil {
return err
}
}
return nil
}
func (i *bulkInsertCSVRowIter) processBatch(ctx context.Context) error {
batchLen := len(i.currentBatch)
colIDs := make([]uint64, batchLen)
colKeys := make([]string, batchLen)
insertData := make([]interface{}, len(i.options.columnMap))
addColID := func(index int, v interface{}) error {
switch id := v.(type) {
case int64:
colIDs[index] = uint64(id)
case uint64:
colIDs[index] = id
case string:
colKeys[index] = id
default:
return sql3.NewErrInternalf("unhandled _id data type '%T'", id)
}
return nil
}
// make objects for each column depending on data type
for cidx, mc := range i.options.columnMap {
switch targetType := mc.columnDataType.(type) {
case *parser.DataTypeID:
vals := make([]uint64, batchLen)
insertData[cidx] = vals
case *parser.DataTypeInt:
vals := make([]int64, batchLen)
insertData[cidx] = vals
case *parser.DataTypeString:
vals := make([]string, batchLen)
insertData[cidx] = vals
case *parser.DataTypeTimestamp:
vals := make([]time.Time, batchLen)
insertData[cidx] = vals
default:
return sql3.NewErrInternalf("unhandled target type '%T'", targetType)
}
}
// for each row in the batch add value to each mapped column
log.Printf("BULK INSERT: building batch...")
for rowIdx, row := range i.currentBatch {
csvRow, ok := row.([]string)
if !ok {
return sql3.NewErrInternalf("unexpected row type '%T'", row)
}
//handle each column
for colIdx, mc := range i.options.columnMap {
columnPosition, ok := mc.columnSource.(int64)
if !ok {
return sql3.NewErrInternalf("unexpected columnPosition type '%T'", mc.columnSource)
}
switch targetType := mc.columnDataType.(type) {
case *parser.DataTypeID:
valueStr := csvRow[columnPosition]
insertValue, err := strconv.ParseUint(valueStr, 10, 64)
if err != nil {
return err
}
columnData, ok := insertData[colIdx].([]uint64)
if !ok {
return sql3.NewErrInternalf("unexpected columnData type '%T'", insertData[colIdx])
}
columnData[rowIdx] = insertValue
case *parser.DataTypeInt:
valueStr := csvRow[columnPosition]
insertValue, err := strconv.ParseInt(valueStr, 10, 64)
if err != nil {
return err
}
columnData, ok := insertData[colIdx].([]int64)
if !ok {
return sql3.NewErrInternalf("unexpected columnData type '%T'", insertData[colIdx])
}
columnData[rowIdx] = insertValue
case *parser.DataTypeString:
insertValue := csvRow[columnPosition]
columnData, ok := insertData[colIdx].([]string)
if !ok {
return sql3.NewErrInternalf("unexpected columnData type '%T'", insertData[colIdx])
}
columnData[rowIdx] = insertValue
case *parser.DataTypeTimestamp:
valueStr := csvRow[columnPosition]
var insertValue time.Time
if tm, err := time.ParseInLocation(time.RFC3339Nano, valueStr, time.UTC); err == nil {
insertValue = tm
} else if tm, err := time.ParseInLocation(time.RFC3339, valueStr, time.UTC); err == nil {
insertValue = tm
} else if tm, err := time.ParseInLocation("2006-01-02 15:04:05", valueStr, time.UTC); err == nil {
insertValue = tm
} else if tm, err := time.ParseInLocation("2006-01-02", valueStr, time.UTC); err == nil {
insertValue = tm
} else {
return err
}
columnData, ok := insertData[colIdx].([]time.Time)
if !ok {
return sql3.NewErrInternalf("unexpected columnData type '%T'", insertData[colIdx])
}
columnData[rowIdx] = insertValue
default:
return sql3.NewErrInternalf("unhandled target type '%T'", targetType)
}
}
// add _id
if len(i.options.idColumnMap) > 0 {
return sql3.NewErrInternalf("not yet implemented")
} else {
// if the table is keyed, use the string representation of an integer key value
if i.isKeyed {
//auto increment
err := addColID(rowIdx, fmt.Sprintf("%d", i.lastKeyValue))
if err != nil {
return err
}
} else {
//auto increment
err := addColID(rowIdx, i.lastKeyValue)
if err != nil {
return err
}
}
i.lastKeyValue += 1
}
}
log.Printf("BULK INSERT: building batch complete")
// now loop again and actually do the insert
log.Printf("BULK INSERT: inserting columns...")
qcx := i.planner.computeAPI.Txf().NewQcx()
//nil out colids if the table is keyed
for colIdx, mc := range i.options.columnMap {
log.Printf("BULK INSERT: inserting column '%s'...", mc.columnName)
if i.isKeyed {
colIDs = nil
}
switch targetType := mc.columnDataType.(type) {
case *parser.DataTypeID:
vals, ok := insertData[colIdx].([]uint64)
if !ok {
return sql3.NewErrInternalf("unexpected insert data type '%T'", insertData[colIdx])
}
req := &pilosa.ImportRequest{
Index: i.tableName,
Field: mc.columnName,
Shard: 0, //TODO: handle non-0 shards
ColumnIDs: colIDs,
ColumnKeys: colKeys,
RowIDs: vals,
}
err := i.planner.computeAPI.Import(ctx, qcx, req)
if err != nil {
return err
}
case *parser.DataTypeInt:
vals, ok := insertData[colIdx].([]int64)
if !ok {
return sql3.NewErrInternalf("unexpected insert data type '%T'", insertData[colIdx])
}
req := &pilosa.ImportValueRequest{
Index: i.tableName,
Field: mc.columnName,
Shard: 0, //TODO: handle non-0 shards
ColumnIDs: colIDs,
ColumnKeys: colKeys,
Values: vals,
}
err := i.planner.computeAPI.ImportValue(ctx, qcx, req)
if err != nil {
return err
}
case *parser.DataTypeString:
vals, ok := insertData[colIdx].([]string)
if !ok {
return sql3.NewErrInternalf("unexpected insert data type '%T'", insertData[colIdx])
}
req := &pilosa.ImportRequest{
Index: i.tableName,
Field: mc.columnName,
Shard: 0, //TODO: handle non-0 shards
ColumnIDs: colIDs,
ColumnKeys: colKeys,
RowKeys: vals,
}
err := i.planner.computeAPI.Import(ctx, qcx, req)
if err != nil {
return err
}
case *parser.DataTypeTimestamp:
vals, ok := insertData[colIdx].([]time.Time)
if !ok {
return sql3.NewErrInternalf("unexpected insert data type '%T'", insertData[colIdx])
}
// TODO (pok) - getting and error for timestamp columns
// 'Error: local import after remote imports: number of columns (1) and number of values (0) do not match'
req := &pilosa.ImportValueRequest{
Index: i.tableName,
Field: mc.columnName,
Shard: 0, //TODO: handle non-0 shards
ColumnIDs: colIDs,
ColumnKeys: colKeys,
TimestampValues: vals,
}
err := i.planner.computeAPI.ImportValue(ctx, qcx, req)
if err != nil {
return err
}
default:
return sql3.NewErrInternalf("unhandled target type '%T'", targetType)
}
log.Printf("BULK INSERT: inserting column '%s' complete.", mc.columnName)
}
log.Printf("BULK INSERT: inserting columns complete.")
/*
//eval all the expressions and do the insert
for idx, iv := range i.insertValues {
sourceType := iv.Type()
switch targetType := i.targetColumns[idx].dataType.(type) {
case *parser.DataTypeBool:
err = addColID(columnID)
if err != nil {
return nil, err
}
val := eval.(bool)
vals := make([]uint64, 1)
if val {
vals[0] = 1
} else {
vals[0] = 0
}
req := &pilosa.ImportRequest{
Index: i.tableName,
Field: targetColumn.columnName,
Shard: 0, //TODO: handle non-0 shards
ColumnIDs: colIDs,
ColumnKeys: colKeys,
RowIDs: vals,
}
err = i.planner.computeAPI.Import(ctx, qcx, req)
if err != nil {
return nil, err
}
case *parser.DataTypeDecimal:
err = addColID(columnID)
if err != nil {
return nil, err
}
vals := make([]float64, 1)
vals[0] = eval.(pql.Decimal).Float64()
req := &pilosa.ImportValueRequest{
Index: i.tableName,
Field: targetColumn.columnName,
Shard: 0, //TODO: handle non-0 shards
ColumnIDs: colIDs,
ColumnKeys: colKeys,
FloatValues: vals,
}
err = i.planner.computeAPI.ImportValue(ctx, qcx, req)
if err != nil {
return nil, err
}
case *parser.DataTypeIDSet:
rowIDs := make([]uint64, 0)
rowSet := eval.([]int64)
for k := range rowSet {
err = addColID(columnID)
if err != nil {
return nil, err
}
rowIDs = append(rowIDs, uint64(rowSet[k]))
}
req := &pilosa.ImportRequest{
Index: i.tableName,
Field: targetColumn.columnName,
Shard: 0, //TODO: handle non-0 shards
ColumnIDs: colIDs,
ColumnKeys: colKeys,
RowIDs: rowIDs,
}
err = i.planner.computeAPI.Import(ctx, qcx, req)
if err != nil {
return nil, err
}
case *parser.DataTypeIDSetQuantum:
rowIDs := make([]uint64, 0)
timestamps := make([]int64, 0)
coercedVal, err := coerceValue(sourceType, targetType, eval, parser.Pos{Line: 0, Column: 0})
if err != nil {
return nil, err
}
record := coercedVal.([]interface{})
rowSet := record[1].([]int64)
for k := range rowSet {
err = addColID(columnID)
if err != nil {
return nil, err
}
rowIDs = append(rowIDs, uint64(rowSet[k]))
}
if record[0] == nil {
timestamps = nil
} else {
timestamp, ok := record[0].(time.Time)
if !ok {
return nil, sql3.NewErrInternalf("unexpected type '%T'", record[0])
}
for _ = range rowSet {
timestamps = append(timestamps, timestamp.Unix())
}
}
req := &pilosa.ImportRequest{
Index: i.tableName,
Field: targetColumn.columnName,
Shard: 0, //TODO: handle non-0 shards
ColumnIDs: colIDs,
ColumnKeys: colKeys,
RowIDs: rowIDs,
Timestamps: timestamps,
}
err = i.planner.computeAPI.Import(ctx, qcx, req)
if err != nil {
return nil, err
}
case *parser.DataTypeStringSet:
rowKeys := make([]string, 0)
rowSet := eval.([]string)
for k := range rowSet {
err = addColID(columnID)
if err != nil {
return nil, err
}
rowKeys = append(rowKeys, rowSet[k])
}
req := &pilosa.ImportRequest{
Index: i.tableName,
Field: targetColumn.columnName,
Shard: 0, //TODO: handle non-0 shards
ColumnIDs: colIDs,
ColumnKeys: colKeys,
RowKeys: rowKeys,
}
err = i.planner.computeAPI.Import(ctx, qcx, req)
if err != nil {
return nil, err
}
case *parser.DataTypeStringSetQuantum:
rowKeys := make([]string, 0)
timestamps := make([]int64, 0)
coercedVal, err := coerceValue(sourceType, targetType, eval, parser.Pos{Line: 0, Column: 0})
if err != nil {
return nil, err
}
record := coercedVal.([]interface{})
rowSet := record[1].([]string)
for k := range rowSet {
err = addColID(columnID)
if err != nil {
return nil, err
}
rowKeys = append(rowKeys, rowSet[k])
}
if record[0] == nil {
timestamps = nil
} else {
timestamp, ok := record[0].(time.Time)
if !ok {
return nil, sql3.NewErrInternalf("unexpected type '%T'", record[0])
}
for _ = range rowSet {
timestamps = append(timestamps, timestamp.Unix())
}
}
req := &pilosa.ImportRequest{
Index: i.tableName,
Field: targetColumn.columnName,
Shard: 0, //TODO: handle non-0 shards
ColumnIDs: colIDs,
ColumnKeys: colKeys,
RowKeys: rowKeys,
Timestamps: timestamps,
}
err = i.planner.computeAPI.Import(ctx, qcx, req)
if err != nil {
return nil, err
}
default:
return nil, sql3.NewErrInternalf("unhandled data type '%T'", targetType)
}
}*/
// done with current batch
i.currentBatch = nil
return nil
}