Commit graph

455 commits

Author SHA1 Message Date
Nia Weiss
a8f7ec4a12
execute like queries on the primary's key translation database
This works around an issue where unreplicated keys will not be matched everywhere.
This also avoids the cost of creating millions of bolt read transactions and allocating strings.
2021-05-27 14:45:10 -04:00
Todd Gruben
7520e0ef28 rebuild rank caches on restore 2021-05-21 09:27:08 -05:00
Todd Gruben
9d24fb07b7 wired in restore command 2021-05-21 09:27:08 -05:00
Seebs
aa4a23b2d9 generate sorted positions from bulkImportStandard
Ensure that positions are sorted, and that we don't generate the same
position more than once.
2021-05-20 12:39:27 -05:00
Seebs
d2b925d296 make importValueSmallWrite faster and also the only path
Since we don't always have "snapshots" anymore, the arguable benefit of
avoiding the snapshot is reduced, and the primary expense of
importPositions has been dramatically reduced as well, so let's
just use that all the time, and simplify life.

We also want to make it faster. We don't know how many bits there
are to set or clear in the input set, but we do know exactly how
many bits there are to set AND clear. We can subdivide these into
batches by rows, then process each batch by storing sets at the
bottom and clears at the top. We can also do batches by columns,
reducing the memory overhead of unpacking all the bits at once.

(For extra credit, we could alternate set/clear settings, and
thus do batches of "the clears from row 0, followed by the clears
from row 1" and "the sets from row 1, followed by the sets from
row 2", and so on, but this is too fancy.)

Every caller of importValue is in fact already providing values
with column IDs sorted. As such, we don't need a map for checking
the previously-set columns; we just need to check against the
previous value.
2021-05-20 12:39:27 -05:00
Nia Weiss
f4ba34247f
remove attributes
Attributes are unmaintained and unused.
They have become more of a liability than a benefit.
This change eliminates them from the codebase.
The only user-visible change (assuming that attrs are not used) is that the attrs field will no longer appear in row JSON.
2021-05-14 10:28:08 -04:00
Kuba Podgórski
1e6b8434eb
Merge branch 'master' into available-shards 2021-05-11 11:53:35 +02:00
Seebs
130b17b621 don't force immediate recalculate of cache on every update
When writing things that cause additions to the cache, mark it dirty and
flag it for recomputing, but only sometimes actually do the recalculation,
currently implying a 10-second window. We still mark the cache dirty,
so if a request comes in, we'll get fresh data, but the query will be
slowed down because the recomputation will happen then. But that's better
than doing thousands of recalculations which are never used...
2021-05-10 11:58:18 -05:00
Kuba Podgórski
2517ee1bde remove unused 2021-05-07 15:45:30 +02:00
Seebs
5ffa4ba803 drop "batched" flag from Add operation
The "batched" flag creates a complexity which is that the return value of Add
might or might not be meaningful, but it doesn't really buy us very much.

If we are concerned about the ops log size of writing single ops as 21-byte
arrays of 1 op rather than as 13-byte ops, we can make the AddN code smarter
about how it writes ops. And probably should.

Along with this, change Remove to use the batched operation form, which
writes a more meaningful ops log, and return a meaningful value for changes
made. Otherwise, it ends up writing potentially thousands of ops to the
ops log without reporting any OpN, because the number of ops written isn't
the same as the number of changes those ops made. This could result in
files growing by megabytes without OpN changing.

There was a comment here about a test failing with RemoveN. I can't prove
it, but I strongly suspect that this was actually a result of that test
case hitting a particular bug that we eventually fixed, and which we might
have fixed sooner if we'd realized why using RemoveN made that test
fail.
2021-04-20 12:03:25 -05:00
Alan Bernstein
285d0a0af8 Add log prefix levels 2021-04-12 20:33:39 -05:00
Ben Johnson
cfc725e799 Add timestamp field type support 2021-04-06 10:50:10 -06:00
Kuba Podgórski
9a02004a4f Move vprint to separate pakage 2021-03-29 14:29:19 +02:00
Kuba Podgórski
03386392ea Fix typos, replace panics by error 2021-03-24 15:15:50 +01:00
Kuba Podgórski
1e5388dbe9 Move internals proto files into separate package (pb) 2021-03-22 20:28:00 +01:00
Travis
81fbeb61f9
fix logic in fragment.bitDepth() 2021-02-23 10:09:56 -06:00
Travis
912e51790f
remove Field.saveMeta(). get Feild.options.BitDepth from fragment 2021-02-23 10:09:56 -06:00
Travis
ebb340d83e
remove old BSI upgrade code 2021-02-23 10:09:54 -06:00
Kuba Podgórski
2f35b51db8
Fix endpoint tests + change BitDepth type to uint64 2021-02-12 20:35:36 -06:00
Travis
d192c1f24f
Merge branch 'master' into disco 2021-02-05 15:58:36 -06:00
nagamocha3000
92426a9d1b Close process on fragment.openStorage error
When *fragment.openStorage is invoked in both f.importValue and
f.importValueSmallWrite and it returns an error, this means there's
some underlying error with the storage device and at the point of this
commit, the sane thing to do is to close the process, otherwise the
operation of Pilosa might proceed in an inconsistent state thus
precipiatting other silent but hairy errors along the way such as
dereferencing *fragment.gen later on which is set to nil once
openStorage fails.
2021-02-03 18:47:10 +03:00
Travis
c9e6f17ae0
Merge branch 'master' into disco 2021-01-23 19:22:20 -06:00
nagamocha3000
113bec2474 Remove unnecessary nil check 2021-01-21 15:48:52 +03:00
nagamocha3000
0437f5d28a Handle case where row returned might be nil 2021-01-19 16:51:26 +03:00
nagamocha3000
d26c6b048e Sort all rowIDs gathered before storing them 2021-01-19 02:00:50 +03:00
nagamocha3000
9b23dcdd0a Gather rows for each fragment in a much smarter way 2021-01-19 01:44:54 +03:00
nagamocha3000
b77f9e8a43 Add timeFragments rowIterator 2021-01-15 23:36:54 +03:00
Travis
8dbfae1d86
temporarily have cluster implement Noder 2021-01-07 13:45:46 -06:00
Travis
134abda51b
Implement snap := ClusterSnapshot()
Below is the list of instance of `ClusterSnapshot()` in the latest
`with-etcd` code. Some of these may not yet exist in the `disco` branch,
but this commit is implementing any that currently apply.

==========================
Done:
==========================
index.go
930:	snap := NewClusterSnapshot(topo, topo.Hasher, topo.ReplicaN)
1072:	snap := NewClusterSnapshot(topo, topo.Hasher, topo.ReplicaN)

cmd/pilosa-fsck/fsck.go
786:	snap := pilosa.NewClusterSnapshot(cfg.topo, cfg.topo.Hasher, cfg.topo.ReplicaN)

boltdb/translate.go
558:	snap := pilosa.NewClusterSnapshot(topo, topo.Hasher, topo.ReplicaN)
1264:	snap := pilosa.NewClusterSnapshot(topo, topo.Hasher, topo.ReplicaN)

fragment.go
3448:	snap := NewClusterSnapshot(s.Cluster.noder, s.Cluster.Hasher, s.Cluster.ReplicaN)
3568:	snap := NewClusterSnapshot(s.Cluster.noder, s.Cluster.Hasher, s.Cluster.ReplicaN)
3620:	snap := NewClusterSnapshot(s.Cluster.noder, s.Cluster.Hasher, s.Cluster.ReplicaN)

==========================
Remaining:
==========================

cluster.go
371:	snap := NewClusterSnapshot(NewLocalNoder(nodes), c.Hasher, c.ReplicaN)
474:	snap := NewClusterSnapshot(c.noder, c.Hasher, c.ReplicaN)
639:	fSnap := NewClusterSnapshot(c.noder, c.Hasher, c.ReplicaN)
640:	toSnap := NewClusterSnapshot(to.noder, c.Hasher, to.ReplicaN)
703:	snap := NewClusterSnapshot(c.noder, c.Hasher, c.ReplicaN)
1475:		snap := NewClusterSnapshot(c.noder, c.Hasher, c.ReplicaN)
1502:	snap := NewClusterSnapshot(c.noder, c.Hasher, c.ReplicaN)
1941:	snap := NewClusterSnapshot(c.noder, c.Hasher, c.ReplicaN)
1986:	snap := NewClusterSnapshot(c.noder, c.Hasher, c.ReplicaN)
2049:	snap := NewClusterSnapshot(c.noder, c.Hasher, c.ReplicaN)
2126:	snap := NewClusterSnapshot(c.noder, c.Hasher, c.ReplicaN)

api.go
475:	snap := NewClusterSnapshot(api.cluster.noder, api.cluster.Hasher, api.cluster.ReplicaN)
604:	snap := NewClusterSnapshot(api.cluster.noder, api.cluster.Hasher, api.cluster.ReplicaN)
690:	snap := NewClusterSnapshot(api.cluster.noder, api.cluster.Hasher, api.cluster.ReplicaN)
1684:	snap := NewClusterSnapshot(api.cluster.noder, api.cluster.Hasher, api.cluster.ReplicaN)
1946:	snap := NewClusterSnapshot(api.cluster.noder, api.cluster.Hasher, api.cluster.ReplicaN)

executor.go
3781:	snap := NewClusterSnapshot(e.Cluster.noder, e.Cluster.Hasher, e.Cluster.ReplicaN)
4157:	snap := NewClusterSnapshot(e.Cluster.noder, e.Cluster.Hasher, e.Cluster.ReplicaN)
4200:	snap := NewClusterSnapshot(e.Cluster.noder, e.Cluster.Hasher, e.Cluster.ReplicaN)
4243:	snap := NewClusterSnapshot(e.Cluster.noder, e.Cluster.Hasher, e.Cluster.ReplicaN)
4517:	snap := NewClusterSnapshot(NewLocalNoder(e.Cluster.Nodes()), e.Cluster.Hasher, e.Cluster.ReplicaN)

holder.go
1465:	snap := NewClusterSnapshot(s.Cluster.noder, s.Cluster.Hasher, s.Cluster.ReplicaN)
1668:	snap := NewClusterSnapshot(s.Cluster.noder, s.Cluster.Hasher, s.Cluster.ReplicaN)
1889:	snap := NewClusterSnapshot(s.Cluster.noder, s.Cluster.Hasher, s.Cluster.ReplicaN)
1963:	snap := NewClusterSnapshot(c.Cluster.noder, c.Cluster.Hasher, c.Cluster.ReplicaN)
2021-01-06 22:53:20 -06:00
Travis
4515a24e48
change all references to use subpackages: topology, net 2021-01-06 16:09:24 -06:00
Jason E. Aten
0db4914bc4 add tests for NewBitmapBitmapFilter constructor
- document sort.Stable need
2020-12-17 00:27:34 +00:00
Seebs
cc5e822799 fix comment, remove unneeded step
It turns out NewSliceBitmap can take an initial set of values
already.
2020-12-16 17:00:34 -06:00
Seebs
4ddbadcea7 review issues: fix unclearSets (now sliceDifference) and prune/fullPrune
unclearSets was completely broken and I have no idea why the test I thought
was testing it didn't actually catch that problem. Added unit tests and fixed
the logic. Improved/clarified prune and fullPrune, and unexported their
names because why export methods on an unexported type.

Also improve some comments and rename a variable or two to improve clarity.
2020-12-16 13:18:18 -06:00
Seebs
dec0a00155 add container N to ConsiderKey 2020-12-16 13:16:46 -06:00
Seebs
23e16474ae use ApplyFilter instead of roaring.ApplyFilterToIterator
In some cases, ApplyFilter can be significantly faster. On the other hand, it doesn't
matter as much as you might think on the mutex imports, because we've already sucked
most of the time out of those.
2020-12-16 13:16:46 -06:00
Seebs
e4e94a5668 prevent weird rare failures in mutex imports
Added additional mutex sample data and batches of it so we can
confirm that overwrite works. It didn't work, so that needed to be fixed.

Couple of things:
(1) Wasn't updating "last value seen" so the check for an unsorted list
didn't work.
(2) Also didn't handle the case where there were to-clear values higher
than any to-set value.

This could result in bits not getting cleared, which could result in
there being more than N bits to clear for N new bits. And that could cause
really strange problems when the input slices were parts of a single
larger slice, because bit positions to clear could get shoved in as
possible columns in a future batch.
2020-12-16 13:16:46 -06:00
Seebs
30d5f891c0 create naive ApplyFilter 2020-12-16 13:16:46 -06:00
Seebs
59d89dda99 Allow arbitrary and potentially more efficient filtering of bitmaps
This is a partial solution to a nasty performance problem, which is that
a ContainerIterator has to *generate* all the containers. With roaring, this
was cheap because they already exist in memory; with transactional backends,
it's an allocation per container, *even for the containers we don't use*.

This design admits filters which can distinguish between answers they
can give just based on keys and times when they actually need containers
instantiated, and can also give hints as to future answers -- saying "yes"
or "no" to entire rows at a time, or indicating when they're done.

This is only part of the solution; we also need a Tx API hook for
doing scans like this which doesn't rely on ContainerIterator.
2020-12-16 13:16:46 -06:00
Jason E. Aten
b254c6776b FragSpec as struct, fragment fields to avoid dynamic dispatch
- allow inlining of getters index(), view().
 - GOMAXPROCS set to 128
2020-12-12 16:39:24 +00:00
Todd Gruben
8ad7afbe43 FragProxy reduces string memory consumption drastically
for datasets with lots of views, because we don't
replicate path, index, field, view strings so often.
2020-12-11 21:01:15 +00:00
Nia Weiss
46818863e8
implement TopK on time
This replaces the former TopK BSI building algorithm, as the row cache was too expensive.
Additionally, BSI addition has been optimized with specialized adders inside of roaring.
2020-11-20 11:06:55 -05:00
Nia Weiss
02498ce57a
add TopK with perpendicular BSI bitmaps 2020-11-13 18:31:55 -05:00
Jason E. Aten
509348260f better migration logging 2020-10-28 22:54:58 +00:00
Jason E. Aten
062bd5c8c7 pilosa: write lock the fragment when rowcache used
- only allocate the rowcache if it is in use (avoid allocation per fragment)
 - when the rowcache is use, fragment.go intRowIterator must write lock the
   fragment because the f.rowCache will be updated.
 - eliminate unused bitmapCache interface to keep the linter happy.
 - fixes #1035
2020-10-28 00:53:38 +00:00
Seebs
aec11ff713 Update cache entries when setting a row even in shards with no new data
The logic assumes that the lack of a corresponding rowSegment means that
there's no changes, but that's not true -- we just deleted all the
existing data! Update to match clearRow behavior better.

Also, add a corresponding test case for this.

Also, change references to 'defaultSnapshotQueue' to use
[fragment].holder.SnapshotQueue, because defaultSnapshotQueue was
the queueless queue, but holders were getting a snapshot queue,
meaning that "awaiting" a snapshot could result in moving on
and closing the holder before the actual snapshot queue finished
snapshotting.
2020-10-02 12:57:18 -05:00
Jason Aten
7ae8accfa8 Bitmap.DirectAdd avoids returning overfull containers
- log Debugf when we repair a fragment block
- better run-run roaring testing for over-sized containers
- add which fragment path to panic on container too big
- include container contents in roaring hash for pilosa-chk/pilosa-check-backup
2020-09-23 17:13:25 -05:00
Jason Aten
2eb097c14d blue_green migration. holdbkg.go holder goroutine.
- blue_green for doing migration. Called before Holder.Open finishes.
- holdbkg.go added for index lookup. Less wedging between a deadlock and a race.
- fix fault under read-only map under lmdb at
  TestExecutor_Execute_Row_Range/RowIDColumnID by doing cow in roaring.
- roaring -tags gofuzz builds again
- roaringparanoia build tag added to make test targets in Makefile
- add rbf.NewDBWithAllocZero for out-of-bounds memory checks
- .circleci/config.yml test-shardwidth-22 with large run container, kept OOM-ing we suspect.

Fixes #819
2020-09-11 14:24:15 -05:00
Ben Johnson
a51c530763 Add direct import option; remove tx from fragment.Open() 2020-09-08 08:13:16 -06:00
Jason Aten
63187f59ee refine our f.gen nil handling to support blue/green 2020-09-04 17:28:38 -05:00
Jason Aten
4b6e773c7c panic if f.gen is nil because it means the storage wasn't open 2020-09-04 13:19:46 -05:00