Commit graph

257 commits

Author SHA1 Message Date
Seebs
f019cc7409 make import correctly reflect that it needs a single shard always
In fact, we have a number of things assuming that values passed to Import
always fit within a single known shard, so, drop all the extra complexity
around this, drop the computation of fancy view/shard keys, and so on.

There's a lot of room left to improve this probably but it's at least
better, I think.

Unfortunately, there's a handful of things, basically all of which are
test cases, which were relying on this, so, we also add functionality
for splitting import requests by shards. But this allows us to stop
duplicating each shard's inputs one at a time... which turns out to
mean that we now care that the import operation can write back to the
import request. This only affects test cases, so we adopt a crufty
hack involving cloning import requests in those rare cases, and also
when reusing the same column IDs to write to the existence field that
we'd be using later to write to another field.

Note that even if we weren't overwriting the column IDs with positions,
we'd be sorting the column/row ID lists by row-then-column, which means
we'd still be corrupting the column ID lists. This may want to change
at some point.

We also reuse a single Tx for all the views, because DB-per-shard
means that should work fine, and reduces the cost of doing these
updates, probably.
2021-08-18 13:45:36 -05:00
Seebs
e768fc89ea stop using pointers to time.Time
We're reading timestamps as []int64, instead of allocating a time.Time
for each timestamp, just use the same logic to determine whether to use the
int64 timestamp that we would have used to decide whether to allocate it.
We still have to check the whole run, though, because we're providing a large
list of 0s instead of "no timestamps", for Reasons.
2021-08-18 13:45:36 -05:00
Mahesh Arumugam
858f889745 FeatureBase Renaming: changing go.mod module name for featurebase 2021-07-19 09:20:30 -07:00
Seebs
7c4b91eef0 simplify field ImportValue
There's only ever one view in importValue, but there's also only ever
one shard, because importValue is only called by things called from
the API after it has split everything up by shard.
2021-05-20 12:39:27 -05:00
Nia Weiss
f4ba34247f
remove attributes
Attributes are unmaintained and unused.
They have become more of a liability than a benefit.
This change eliminates them from the codebase.
The only user-visible change (assuming that attrs are not used) is that the attrs field will no longer appear in row JSON.
2021-05-14 10:28:08 -04:00
Kuba Podgórski
ca1cbadb45 Make validateName function public, so other packages and projects (like IDK, Ingester) can re-use it 2021-04-14 13:33:26 +02:00
Ben Johnson
cfc725e799 Add timestamp field type support 2021-04-06 10:50:10 -06:00
Kuba Podgórski
9a02004a4f Move vprint to separate pakage 2021-03-29 14:29:19 +02:00
Travis
314cf3461d
Cache BitDepth on bsiGroup during index.Open.
Before this change, we were only caching the BitDepth on the
field.options. This was ok as long as applyOptions() was called after
that. But unfortunately, during startup, applyOptions() was called prior
to that being set. So with this commit, we explicitly set the value in
bsiGroup.BitDepth as well.
2021-03-14 22:51:24 -05:00
Travis
cad78f1d34
remove "Default*" from const names 2021-03-05 16:56:44 -06:00
Travis
4661f3ac08
reorganize the storage backends directory 2021-03-05 16:56:44 -06:00
Travis
4738a818d2
change attributes file ".data" to "column/row-attributes" 2021-03-05 16:56:44 -06:00
Travis
345d076fdf
introduce "fields" directory between index and field 2021-03-05 16:56:44 -06:00
Nia Weiss
3fbf6993d0
defer cluster messages until startup 2021-02-25 16:01:49 -05:00
Travis
912e51790f
remove Field.saveMeta(). get Feild.options.BitDepth from fragment 2021-02-23 10:09:56 -06:00
Travis
8b0f18721e
remove Field.loadMeta() 2021-02-23 10:09:55 -06:00
Travis
d639e228ae
remove Index.saveMeta(). remove support for deleing existence field. 2021-02-23 10:09:55 -06:00
Travis
2c112a73fe
remove Index.loadMeta() 2021-02-23 10:09:55 -06:00
Travis
38d5459e25
convert holder decode* methods to functions 2021-02-23 10:09:55 -06:00
Travis
3f0745647b
set timestamp() on field 2021-02-23 10:09:55 -06:00
Travis
114d74af29
pass cfm to openField() 2021-02-23 10:09:54 -06:00
Travis
24c5b654c6
change IndexOptions to reference by value 2021-02-23 10:09:54 -06:00
Travis
e54f7d9a0b
ensure field.CreatedAt is set on loadField 2021-02-15 21:28:20 -06:00
Travis
8f0270acda
adjust openExistenceField() to check on disk first 2021-02-12 20:35:36 -06:00
Kuba Podgórski
2f35b51db8
Fix endpoint tests + change BitDepth type to uint64 2021-02-12 20:35:36 -06:00
Travis
a6297dc48e
WIP: load schema from etcd on holder open; validate indexes, fields, views 2021-02-12 20:32:31 -06:00
Travis
1c3b0f364d
implement ApplySchema, LoadSchema, and LoadSchemaMessage 2021-02-10 11:51:52 -06:00
Travis
8fe1b9a37c
store views in etcd via Schemator 2021-02-10 11:47:26 -06:00
Kuba Podgórski
37b309be16 Move schemator from API to index. Fix TestExecutor_Execute_SetRow 2021-02-08 21:54:39 +01:00
Travis
3542134100
WIP: implement Schemator 2021-02-08 10:42:55 -06:00
Travis
b7d6db51a3
remove dead code related to pilosa-chk 2021-02-05 16:13:43 -06:00
Travis
134abda51b
Implement snap := ClusterSnapshot()
Below is the list of instance of `ClusterSnapshot()` in the latest
`with-etcd` code. Some of these may not yet exist in the `disco` branch,
but this commit is implementing any that currently apply.

==========================
Done:
==========================
index.go
930:	snap := NewClusterSnapshot(topo, topo.Hasher, topo.ReplicaN)
1072:	snap := NewClusterSnapshot(topo, topo.Hasher, topo.ReplicaN)

cmd/pilosa-fsck/fsck.go
786:	snap := pilosa.NewClusterSnapshot(cfg.topo, cfg.topo.Hasher, cfg.topo.ReplicaN)

boltdb/translate.go
558:	snap := pilosa.NewClusterSnapshot(topo, topo.Hasher, topo.ReplicaN)
1264:	snap := pilosa.NewClusterSnapshot(topo, topo.Hasher, topo.ReplicaN)

fragment.go
3448:	snap := NewClusterSnapshot(s.Cluster.noder, s.Cluster.Hasher, s.Cluster.ReplicaN)
3568:	snap := NewClusterSnapshot(s.Cluster.noder, s.Cluster.Hasher, s.Cluster.ReplicaN)
3620:	snap := NewClusterSnapshot(s.Cluster.noder, s.Cluster.Hasher, s.Cluster.ReplicaN)

==========================
Remaining:
==========================

cluster.go
371:	snap := NewClusterSnapshot(NewLocalNoder(nodes), c.Hasher, c.ReplicaN)
474:	snap := NewClusterSnapshot(c.noder, c.Hasher, c.ReplicaN)
639:	fSnap := NewClusterSnapshot(c.noder, c.Hasher, c.ReplicaN)
640:	toSnap := NewClusterSnapshot(to.noder, c.Hasher, to.ReplicaN)
703:	snap := NewClusterSnapshot(c.noder, c.Hasher, c.ReplicaN)
1475:		snap := NewClusterSnapshot(c.noder, c.Hasher, c.ReplicaN)
1502:	snap := NewClusterSnapshot(c.noder, c.Hasher, c.ReplicaN)
1941:	snap := NewClusterSnapshot(c.noder, c.Hasher, c.ReplicaN)
1986:	snap := NewClusterSnapshot(c.noder, c.Hasher, c.ReplicaN)
2049:	snap := NewClusterSnapshot(c.noder, c.Hasher, c.ReplicaN)
2126:	snap := NewClusterSnapshot(c.noder, c.Hasher, c.ReplicaN)

api.go
475:	snap := NewClusterSnapshot(api.cluster.noder, api.cluster.Hasher, api.cluster.ReplicaN)
604:	snap := NewClusterSnapshot(api.cluster.noder, api.cluster.Hasher, api.cluster.ReplicaN)
690:	snap := NewClusterSnapshot(api.cluster.noder, api.cluster.Hasher, api.cluster.ReplicaN)
1684:	snap := NewClusterSnapshot(api.cluster.noder, api.cluster.Hasher, api.cluster.ReplicaN)
1946:	snap := NewClusterSnapshot(api.cluster.noder, api.cluster.Hasher, api.cluster.ReplicaN)

executor.go
3781:	snap := NewClusterSnapshot(e.Cluster.noder, e.Cluster.Hasher, e.Cluster.ReplicaN)
4157:	snap := NewClusterSnapshot(e.Cluster.noder, e.Cluster.Hasher, e.Cluster.ReplicaN)
4200:	snap := NewClusterSnapshot(e.Cluster.noder, e.Cluster.Hasher, e.Cluster.ReplicaN)
4243:	snap := NewClusterSnapshot(e.Cluster.noder, e.Cluster.Hasher, e.Cluster.ReplicaN)
4517:	snap := NewClusterSnapshot(NewLocalNoder(e.Cluster.Nodes()), e.Cluster.Hasher, e.Cluster.ReplicaN)

holder.go
1465:	snap := NewClusterSnapshot(s.Cluster.noder, s.Cluster.Hasher, s.Cluster.ReplicaN)
1668:	snap := NewClusterSnapshot(s.Cluster.noder, s.Cluster.Hasher, s.Cluster.ReplicaN)
1889:	snap := NewClusterSnapshot(s.Cluster.noder, s.Cluster.Hasher, s.Cluster.ReplicaN)
1963:	snap := NewClusterSnapshot(c.Cluster.noder, c.Cluster.Hasher, c.Cluster.ReplicaN)
2021-01-06 22:53:20 -06:00
Jason E. Aten
035073555a pilosa: only open views with data
- Previously, on timequantum schemas, we would
create and open a view for the cartesian
product of every possible view and shard.

- This caused us to be very slow on re-open,
and to use lots of memory for views that
held nothing.

- This change makes startup faster, memory
use much lower, and should speed migration.
2020-12-19 00:03:31 +00:00
Alan Bernstein
063a3b96e3
Check index.keys before opening translate store 2020-11-20 12:43:15 -06:00
Jason E. Aten
7e22994a6d run migration in parallel
- migration can be slow. parallelize it.
2020-11-05 18:31:27 +00:00
Jason E. Aten
50a8db854d pilosa-fsck: the -readers flag controls parallelism
- add path info to the panic if we find a corrupt boltdb
   translation store.
2020-10-13 18:58:38 -05:00
Jason Aten
8da15b18d4 pilosa-fsck: parallelize Index.ComputeTranslatorSummary
- add -index option
2020-10-09 15:53:29 -05:00
Jason Aten
2f9c51349a correct repair -> analysis in pilosa-fsck logging 2020-10-05 19:59:32 -05:00
Jason E. Aten
fe425a84c0 pilosa-fsck: scan and repair of pilosa backups
- the -fix flag repairs replication errors by copying from the primary.
 - the -fixkeys flag repairs any string key translation issues.
 - make pilosa-fsck installs pilosa-fsck and builds release-pilosa-fsck.COMMIT.GOOS.tar.gz release tarbar
2020-10-02 16:47:56 -05:00
Jason Aten
748f6a61bc fine tune Tx placement, isolate Tx backends more.
- Tx creation is lazier so we don't create xtra shards.

 - Then the dir scan for blue-green state checking finds only the right shards.
2020-09-14 18:03:25 -05:00
Jason Aten
7028bcfc9d fix resource leaks in fragment_internal_test.go under roaring, better skipForRoaring func
- add tournament.sh to do all pair-wise comparisons of blue-green backends.
- isolate txstores away from roaring index/ directories with indexname.index.txstores@@@ dirs.
2020-09-13 22:45:39 -05:00
Jason Aten
2eb097c14d blue_green migration. holdbkg.go holder goroutine.
- blue_green for doing migration. Called before Holder.Open finishes.
- holdbkg.go added for index lookup. Less wedging between a deadlock and a race.
- fix fault under read-only map under lmdb at
  TestExecutor_Execute_Row_Range/RowIDColumnID by doing cow in roaring.
- roaring -tags gofuzz builds again
- roaringparanoia build tag added to make test targets in Makefile
- add rbf.NewDBWithAllocZero for out-of-bounds memory checks
- .circleci/config.yml test-shardwidth-22 with large run container, kept OOM-ing we suspect.

Fixes #819
2020-09-11 14:24:15 -05:00
Antonio Navarro Perez
ca340f7e62 [hash] Remove duplicated blake3 code
blake3 code is used in several places on the code. The file was
duplicated on root and rbf package.

To avoid cyclic dependencies, I moved it to hash package. Some methods
must be public to use them in different places.

HashOfDir method was removed. Not used.

Signed-off-by: Antonio Navarro Perez <antnavper@gmail.com>
2020-09-07 12:24:22 +02:00
Ben Johnson
150c8a5b06 database per shard, HolderConfig, rbf bit-wise import speedups.
- introduce Query Context (Qcx) for managing database-per-shard.
- replaces the MultiTx, so mtx.go is retired and removed.
- introduces the HolderConfig struct and all Holders now have
  a path from birth.
- rbf speedups on bitwise writes
- badgerdb is removed due to unresolvable write conflicts.

fixes #703 #676
2020-09-04 13:00:33 -05:00
Jason Aten
1e87d113f1 pilosa-chk: col, row translation reported, -v shows fragment checksum 2020-09-03 18:14:49 -05:00
Jason Aten
56803e6632 pilosa/cmd/translatorchk checksums and summarizes key counts from column key translators.
opens ~/.pilosa/index/_keys boltdbs and hashes the StringKey->ID mappings.
2020-09-03 15:23:05 -05:00
Kuba Podgórski
2ca8ca0605 Pass name to newNotFoundError 2020-08-27 15:35:23 +02:00
Seebs
cecaf99ee4 testhook: leak auditing infrastructure
The testhook/ package provides an easy way to set up multiple
hooks to run before/after tests are run.

The audit hooks track open and closes of storage backends,
files, indexes, and holders, for example. A tempdir wrapper
creates temporary directories which are automatically cleaned up
when the test ends. Any kind of resource creation that
should be closed at test conclusion can be tracked. We
will complain at the end of the TestMain if resources are
leaking.

Leaks under go1.13:

We use a wrapper function which is a no-op for go 1.13, but actually
calls testing.TB.Cleanup in go1.14, so we can still build with 1.13 even though
tests will leak files all over the place there. Because of this,
don't run the testhook tests when using 1.13, as they'll always fail.

- the test/pilosa.go http client now times out after 10 seconds
to help diagnose hung server situations.

- Makefile targets added to get better progress reports.
2020-08-24 11:26:39 -05:00
Jason Aten
123ce41840 add lmdb, Tx call stats, and prep for db/shard.
- lmdb as a backend (lmdb.go)
   (lmdb is the fastest known transactional storage backend)
 - per Tx call statics report enabled with PILOSA_CALLSTAT=true (stattx.go)
 - framework for per-shard db (dbshard.go)
 - txfactory handles any pair under blue-green testing (txfactory.go)
 - enable CGO in Dockerfiles for lmdb
2020-08-17 18:26:58 -05:00
Jason Aten
6dc9727796 PutContainer() handles large txn with autocommit 2020-08-12 23:15:23 +00:00