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Drop --allow-no-checkpoints and the paired ManifestArgs in_place / allow_no_checkpoints fields. The CLI now translates --in-place into a single ManifestArgs.worktree_mode = "never" signal that flows through the existing args→layer pipeline as run.sandbox.local.worktree_mode = Never. The server computes prepared.in_place from the resolved settings once, replacing the trio of bail!s and the sandbox-default fixup. |
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