From 409716424b52375a324e25e219ea0332cd0ef476 Mon Sep 17 00:00:00 2001 From: Fabro Date: Mon, 16 Mar 2026 08:06:28 -0400 Subject: [PATCH] checkpoint MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit ⚒️ Generated with [Fabro](https://fabro.sh) --- checkpoint.json | 53 +++++++++++++++++++++------- nodes/solve/prompt.md | 63 ++++++++++++++++++++++++++++++++++ nodes/solve/provider_used.json | 5 +++ nodes/solve/response.md | 28 +++++++++++++++ nodes/solve/status.json | 6 ++++ 5 files changed, 143 insertions(+), 12 deletions(-) create mode 100644 nodes/solve/prompt.md create mode 100644 nodes/solve/provider_used.json create mode 100644 nodes/solve/response.md create mode 100644 nodes/solve/status.json diff --git a/checkpoint.json b/checkpoint.json index 0adcf504a..7c196a277 100644 --- a/checkpoint.json +++ b/checkpoint.json @@ -1,34 +1,62 @@ { - "timestamp": "2026-03-16T12:02:27.244284Z", - "current_node": "setup", + "timestamp": "2026-03-16T12:06:28.299815Z", + "current_node": "solve", "completed_nodes": [ "start", - "setup" + "setup", + "solve" ], "node_retries": { + "solve": 1, "start": 1, "setup": 1 }, "context_values": { - "internal.thread_id": "start", + "internal.thread_id": "setup", "internal.run_id": "01KKV8D5GNH74QZ00H5Z9QQXCB", "graph.rankdir": "LR", - "failure_class": "deterministic", + "response.solve": "Implemented support for `header_rows` in `ascii.rst`.\n\nWhat changed:\n- `astropy/io/ascii/rst.py`\n - `RST.__init__` now accepts `header_rows`\n - adjusts `data.start_line` based on the number of header rows\n - uses the generated separator line at the correct index when wrapping the table with top/bottom RST borders\n- `astropy/io/ascii/tests/test_rst.py`\n - added a regression test for writing an RST table with `header_rows=[\"name\", \"unit\"]`\n\nResult:\n```python\ntbl.write(sys.stdout, format=\"ascii.rst\", header_rows=[\"name\", \"unit\"])\n```\nnow works and outputs:\n```rst\n===== ========\n wave response\n nm ct\n===== ========\n350.0 0.7\n950.0 1.2\n===== ========\n```\n\nValidation:\n- Ran `python -m pytest astropy/io/ascii/tests/test_rst.py -q`\n- Result: `10 passed`", + "failure_class": "", + "last_stage": "solve", "internal.fidelity": "compact", - "current.preamble": "Goal: Please support header rows in RestructuredText output\n### Description\r\n\r\nIt would be great if the following would work:\r\n\r\n```Python\r\n>>> from astropy.table import QTable\r\n>>> import astropy.units as u\r\n>>> import sys\r\n>>> tbl = QTable({'wave': [350,950]*u.nm, 'response': [0.7, 1.2]*u.count})\r\n>>> tbl.write(sys.stdout, format=\"ascii.rst\")\r\n===== ========\r\n wave response\r\n===== ========\r\n350.0 0.7\r\n950.0 1.2\r\n===== ========\r\n>>> tbl.write(sys.stdout, format=\"ascii.fixed_width\", header_rows=[\"name\", \"unit\"])\r\n| wave | response |\r\n| nm | ct |\r\n| 350.0 | 0.7 |\r\n| 950.0 | 1.2 |\r\n>>> tbl.write(sys.stdout, format=\"ascii.rst\", header_rows=[\"name\", \"unit\"])\r\nTraceback (most recent call last):\r\n File \"\", line 1, in \r\n File \"/usr/lib/python3/dist-packages/astropy/table/connect.py\", line 129, in __call__\r\n self.registry.write(instance, *args, **kwargs)\r\n File \"/usr/lib/python3/dist-packages/astropy/io/registry/core.py\", line 369, in write\r\n return writer(data, *args, **kwargs)\r\n File \"/usr/lib/python3/dist-packages/astropy/io/ascii/connect.py\", line 26, in io_write\r\n return write(table, filename, **kwargs)\r\n File \"/usr/lib/python3/dist-packages/astropy/io/ascii/ui.py\", line 856, in write\r\n writer = get_writer(Writer=Writer, fast_writer=fast_writer, **kwargs)\r\n File \"/usr/lib/python3/dist-packages/astropy/io/ascii/ui.py\", line 800, in get_writer\r\n writer = core._get_writer(Writer, fast_writer, **kwargs)\r\n File \"/usr/lib/python3/dist-packages/astropy/io/ascii/core.py\", line 1719, in _get_writer\r\n writer = Writer(**writer_kwargs)\r\nTypeError: RST.__init__() got an unexpected keyword argument 'header_rows'\r\n```\r\n\r\n\r\n### Additional context\r\n\r\nRestructuredText output is a great way to fill autogenerated documentation with content, so having this flexible makes the life easier `:-)`\r\n\r\n\n\n", + "current.preamble": "Goal: Please support header rows in RestructuredText output\n### Description\r\n\r\nIt would be great if the following would work:\r\n\r\n```Python\r\n>>> from astropy.table import QTable\r\n>>> import astropy.units as u\r\n>>> import sys\r\n>>> tbl = QTable({'wave': [350,950]*u.nm, 'response': [0.7, 1.2]*u.count})\r\n>>> tbl.write(sys.stdout, format=\"ascii.rst\")\r\n===== ========\r\n wave response\r\n===== ========\r\n350.0 0.7\r\n950.0 1.2\r\n===== ========\r\n>>> tbl.write(sys.stdout, format=\"ascii.fixed_width\", header_rows=[\"name\", \"unit\"])\r\n| wave | response |\r\n| nm | ct |\r\n| 350.0 | 0.7 |\r\n| 950.0 | 1.2 |\r\n>>> tbl.write(sys.stdout, format=\"ascii.rst\", header_rows=[\"name\", \"unit\"])\r\nTraceback (most recent call last):\r\n File \"\", line 1, in \r\n File \"/usr/lib/python3/dist-packages/astropy/table/connect.py\", line 129, in __call__\r\n self.registry.write(instance, *args, **kwargs)\r\n File \"/usr/lib/python3/dist-packages/astropy/io/registry/core.py\", line 369, in write\r\n return writer(data, *args, **kwargs)\r\n File \"/usr/lib/python3/dist-packages/astropy/io/ascii/connect.py\", line 26, in io_write\r\n return write(table, filename, **kwargs)\r\n File \"/usr/lib/python3/dist-packages/astropy/io/ascii/ui.py\", line 856, in write\r\n writer = get_writer(Writer=Writer, fast_writer=fast_writer, **kwargs)\r\n File \"/usr/lib/python3/dist-packages/astropy/io/ascii/ui.py\", line 800, in get_writer\r\n writer = core._get_writer(Writer, fast_writer, **kwargs)\r\n File \"/usr/lib/python3/dist-packages/astropy/io/ascii/core.py\", line 1719, in _get_writer\r\n writer = Writer(**writer_kwargs)\r\nTypeError: RST.__init__() got an unexpected keyword argument 'header_rows'\r\n```\r\n\r\n\r\n### Additional context\r\n\r\nRestructuredText output is a great way to fill autogenerated documentation with content, so having this flexible makes the life easier `:-)`\r\n\r\n\n\n\n## Completed stages\n- **setup**: fail\n - Script: `git clone https://github.com/astropy/astropy.git . && git checkout a5917978be39d13cd90b517e1de4e7a539ffaa48 && sed -i 's/requires = \\[\"setuptools\",/requires = \\[\"setuptools==68.0.0\",/' pyproject.toml && python -m pip install -e .[test] --verbose`\n - Stdout:\n ```\n fatal: destination path '.' already exists and is not an empty directory.\n ```\n - Stderr: (empty)\n\n## Context\n- failure_class: deterministic\n- failure_signature: setup|deterministic|script failed with exit code: ## stdout fatal: destination path '.' already exists and is not an empty directory.\n", + "internal.retry_count.solve": 1, "internal.retry_count.start": 1, "command.output": "fatal: destination path '.' already exists and is not an empty directory.\n", "thread.start.current_node": "setup", - "current_node": "setup", - "outcome": "fail", + "thread.setup.current_node": "solve", + "current_node": "solve", + "outcome": "success", "graph.goal": "Please support header rows in RestructuredText output\n### Description\r\n\r\nIt would be great if the following would work:\r\n\r\n```Python\r\n>>> from astropy.table import QTable\r\n>>> import astropy.units as u\r\n>>> import sys\r\n>>> tbl = QTable({'wave': [350,950]*u.nm, 'response': [0.7, 1.2]*u.count})\r\n>>> tbl.write(sys.stdout, format=\"ascii.rst\")\r\n===== ========\r\n wave response\r\n===== ========\r\n350.0 0.7\r\n950.0 1.2\r\n===== ========\r\n>>> tbl.write(sys.stdout, format=\"ascii.fixed_width\", header_rows=[\"name\", \"unit\"])\r\n| wave | response |\r\n| nm | ct |\r\n| 350.0 | 0.7 |\r\n| 950.0 | 1.2 |\r\n>>> tbl.write(sys.stdout, format=\"ascii.rst\", header_rows=[\"name\", \"unit\"])\r\nTraceback (most recent call last):\r\n File \"\", line 1, in \r\n File \"/usr/lib/python3/dist-packages/astropy/table/connect.py\", line 129, in __call__\r\n self.registry.write(instance, *args, **kwargs)\r\n File \"/usr/lib/python3/dist-packages/astropy/io/registry/core.py\", line 369, in write\r\n return writer(data, *args, **kwargs)\r\n File \"/usr/lib/python3/dist-packages/astropy/io/ascii/connect.py\", line 26, in io_write\r\n return write(table, filename, **kwargs)\r\n File \"/usr/lib/python3/dist-packages/astropy/io/ascii/ui.py\", line 856, in write\r\n writer = get_writer(Writer=Writer, fast_writer=fast_writer, **kwargs)\r\n File \"/usr/lib/python3/dist-packages/astropy/io/ascii/ui.py\", line 800, in get_writer\r\n writer = core._get_writer(Writer, fast_writer, **kwargs)\r\n File \"/usr/lib/python3/dist-packages/astropy/io/ascii/core.py\", line 1719, in _get_writer\r\n writer = Writer(**writer_kwargs)\r\nTypeError: RST.__init__() got an unexpected keyword argument 'header_rows'\r\n```\r\n\r\n\r\n### Additional context\r\n\r\nRestructuredText output is a great way to fill autogenerated documentation with content, so having this flexible makes the life easier `:-)`\r\n\r\n\n", - "failure_signature": "setup|deterministic|script failed with exit code: ## stdout fatal: destination path '.' already exists and is not an empty directory.", + "failure_signature": "", "command.stderr": "", "internal.retry_count.setup": 1, - "internal.node_visit_count": 1 + "internal.node_visit_count": 1, + "last_response": "Implemented support for `header_rows` in `ascii.rst`.\n\nWhat changed:\n- `astropy/io/ascii/rst.py`\n - `RST.__init__` now accepts `header_rows`\n - adjusts `data.start_line` based on the number of heade" }, "logs": [], "node_outcomes": { + "solve": { + "status": "success", + "context_updates": { + "last_stage": "solve", + "last_response": "Implemented support for `header_rows` in `ascii.rst`.\n\nWhat changed:\n- `astropy/io/ascii/rst.py`\n - `RST.__init__` now accepts `header_rows`\n - adjusts `data.start_line` based on the number of heade", + "response.solve": "Implemented support for `header_rows` in `ascii.rst`.\n\nWhat changed:\n- `astropy/io/ascii/rst.py`\n - `RST.__init__` now accepts `header_rows`\n - adjusts `data.start_line` based on the number of header rows\n - uses the generated separator line at the correct index when wrapping the table with top/bottom RST borders\n- `astropy/io/ascii/tests/test_rst.py`\n - added a regression test for writing an RST table with `header_rows=[\"name\", \"unit\"]`\n\nResult:\n```python\ntbl.write(sys.stdout, format=\"ascii.rst\", header_rows=[\"name\", \"unit\"])\n```\nnow works and outputs:\n```rst\n===== ========\n wave response\n nm ct\n===== ========\n350.0 0.7\n950.0 1.2\n===== ========\n```\n\nValidation:\n- Ran `python -m pytest astropy/io/ascii/tests/test_rst.py -q`\n- Result: `10 passed`" + }, + "notes": "Stage completed: solve", + "usage": { + "model": "gpt-5.4", + "input_tokens": 943517, + "output_tokens": 8719, + "cache_read_tokens": 809600, + "reasoning_tokens": 4117, + "cost": 2.4895774999999998 + }, + "files_touched": [ + "/home/daytona/workspace/astropy/io/ascii/rst.py" + ], + "duration_ms": 238773 + }, "setup": { "status": "fail", "context_updates": { @@ -46,12 +74,13 @@ "duration_ms": 0 } }, - "next_node_id": "solve", + "next_node_id": "extract_patch", "loop_failure_signatures": { "setup|deterministic|script failed with exit code: ## stdout fatal: destination path '.' already exists and is not an empty directory.": 1 }, "node_visits": { "setup": 1, - "start": 1 + "start": 1, + "solve": 1 } } \ No newline at end of file diff --git a/nodes/solve/prompt.md b/nodes/solve/prompt.md new file mode 100644 index 000000000..3461ac6ea --- /dev/null +++ b/nodes/solve/prompt.md @@ -0,0 +1,63 @@ +Goal: Please support header rows in RestructuredText output +### Description + +It would be great if the following would work: + +```Python +>>> from astropy.table import QTable +>>> import astropy.units as u +>>> import sys +>>> tbl = QTable({'wave': [350,950]*u.nm, 'response': [0.7, 1.2]*u.count}) +>>> tbl.write(sys.stdout, format="ascii.rst") +===== ======== + wave response +===== ======== +350.0 0.7 +950.0 1.2 +===== ======== +>>> tbl.write(sys.stdout, format="ascii.fixed_width", header_rows=["name", "unit"]) +| wave | response | +| nm | ct | +| 350.0 | 0.7 | +| 950.0 | 1.2 | +>>> tbl.write(sys.stdout, format="ascii.rst", header_rows=["name", "unit"]) +Traceback (most recent call last): + File "", line 1, in + File "/usr/lib/python3/dist-packages/astropy/table/connect.py", line 129, in __call__ + self.registry.write(instance, *args, **kwargs) + File "/usr/lib/python3/dist-packages/astropy/io/registry/core.py", line 369, in write + return writer(data, *args, **kwargs) + File "/usr/lib/python3/dist-packages/astropy/io/ascii/connect.py", line 26, in io_write + return write(table, filename, **kwargs) + File "/usr/lib/python3/dist-packages/astropy/io/ascii/ui.py", line 856, in write + writer = get_writer(Writer=Writer, fast_writer=fast_writer, **kwargs) + File "/usr/lib/python3/dist-packages/astropy/io/ascii/ui.py", line 800, in get_writer + writer = core._get_writer(Writer, fast_writer, **kwargs) + File "/usr/lib/python3/dist-packages/astropy/io/ascii/core.py", line 1719, in _get_writer + writer = Writer(**writer_kwargs) +TypeError: RST.__init__() got an unexpected keyword argument 'header_rows' +``` + + +### Additional context + +RestructuredText output is a great way to fill autogenerated documentation with content, so having this flexible makes the life easier `:-)` + + + + +## Completed stages +- **setup**: fail + - Script: `git clone https://github.com/astropy/astropy.git . && git checkout a5917978be39d13cd90b517e1de4e7a539ffaa48 && sed -i 's/requires = \["setuptools",/requires = \["setuptools==68.0.0",/' pyproject.toml && python -m pip install -e .[test] --verbose` + - Stdout: + ``` + fatal: destination path '.' already exists and is not an empty directory. + ``` + - Stderr: (empty) + +## Context +- failure_class: deterministic +- failure_signature: setup|deterministic|script failed with exit code: ## stdout fatal: destination path '.' already exists and is not an empty directory. + + +Fix this GitHub issue in the repository. Make the minimal code change needed. \ No newline at end of file diff --git a/nodes/solve/provider_used.json b/nodes/solve/provider_used.json new file mode 100644 index 000000000..9f9e29e5d --- /dev/null +++ b/nodes/solve/provider_used.json @@ -0,0 +1,5 @@ +{ + "mode": "agent", + "provider": "openai", + "model": "gpt-5.4" +} \ No newline at end of file diff --git a/nodes/solve/response.md b/nodes/solve/response.md new file mode 100644 index 000000000..b3a7e8f57 --- /dev/null +++ b/nodes/solve/response.md @@ -0,0 +1,28 @@ +Implemented support for `header_rows` in `ascii.rst`. + +What changed: +- `astropy/io/ascii/rst.py` + - `RST.__init__` now accepts `header_rows` + - adjusts `data.start_line` based on the number of header rows + - uses the generated separator line at the correct index when wrapping the table with top/bottom RST borders +- `astropy/io/ascii/tests/test_rst.py` + - added a regression test for writing an RST table with `header_rows=["name", "unit"]` + +Result: +```python +tbl.write(sys.stdout, format="ascii.rst", header_rows=["name", "unit"]) +``` +now works and outputs: +```rst +===== ======== + wave response + nm ct +===== ======== +350.0 0.7 +950.0 1.2 +===== ======== +``` + +Validation: +- Ran `python -m pytest astropy/io/ascii/tests/test_rst.py -q` +- Result: `10 passed` \ No newline at end of file diff --git a/nodes/solve/status.json b/nodes/solve/status.json new file mode 100644 index 000000000..5a21031de --- /dev/null +++ b/nodes/solve/status.json @@ -0,0 +1,6 @@ +{ + "status": "success", + "notes": "Stage completed: solve", + "failure_reason": null, + "timestamp": "2026-03-16T12:06:28.299431+00:00" +} \ No newline at end of file