checkpoint

⚒️ Generated with [Fabro](https://fabro.sh)

stages/004-preflight_lint@1/script_timing.json

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stages/004-preflight_lint@1/status.json

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+{
+  "outcome": "succeeded",
+  "notes": "Script completed: cargo +nightly-2026-04-14 clippy -q --workspace --all-targets -- -D warnings 2>&1",
+  "failure_reason": null,
+  "timestamp": "2026-05-04T17:56:09.710143Z"
+}

stages/004-preflight_lint@1/stderr.log

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stages/004-preflight_lint@1/stdout.log

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stages/005-implement@1/prompt.md

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+Goal: # Stage URLs encode visit (`node@visit`)
+
+## Context
+
+Today, in the Fabro web UI, stages that re-run (e.g. `verify` in a loop) all
+collapse to the same URL: `/runs/{id}/stages/verify`. The sidebar lists them
+multiple times but every link/selection points at the first visit.
+
+A **Stage** is a Node + a Visit (1-indexed; bumped each time the workflow
+re-enters that node). The data model already knows this:
+`StageId(node_id, visit)` exists in `lib/crates/fabro-types/src/stage_id.rs`,
+and the OpenAPI `StageId` path parameter
+(`docs/public/api-reference/fabro-api.yaml:2925`) already documents the
+`node_id@visit` form. The bug is that `GET /api/v1/runs/{id}/stages` returns
+`RunStage.id = node_id` (no visit suffix), and the events fallback in the UI
+filters by `node_id` instead of the full `stage_id`.
+
+Note: "visit" is deliberate. There is a separate retry-attempt counter
+inside a single visit (`StageStartedProps.attempt` in
+`lib/crates/fabro-types/src/run_event/stage.rs:13`) — that's not what we're
+modeling here. URLs and the new field both refer to **visits**.
+
+Outcome: each stage gets a distinct URL (e.g. `verify@1`, `verify@2`) that
+loads only that visit's turns/logs, with a `(N)` indicator in the sidebar
+when `N > 1`.
+
+## Approach
+
+**Server**: rebuild the stage list from `RunProjection::iter_stages()`, which
+is already keyed by full `StageId` (`HashMap<StageId, StageProjection>` in
+`lib/crates/fabro-types/src/run_projection.rs:32`). This deletes the
+`checkpoint.completed_nodes` walk (which loses visit info — it's a
+`Vec<String>` of node_ids only) and the `next_node_id` branch entirely.
+
+**Status derivation is event-driven, not completion-driven.**
+`StageProjection.completion` is set by `StageFailed` *even when* the workflow
+is about to retry (`run_state.rs:329` — `StageRetrying` does not clear it),
+so reading completion alone would show `failed` for a stage that's
+retrying. For each stage, scan its events (filtered by exact `stage_id`)
+and take the **latest** lifecycle event:
+- `stage.retrying` → `StageState::Retrying`
+- `stage.failed(props)` with `props.will_retry == true` → `StageState::Retrying`
+- `stage.failed(props)` with `props.will_retry == false` → `StageState::Failed`
+- `stage.completed` → `StageState::from(StageCompletedProps.status)`
+- `stage.started` (no later completed/failed/retrying) → `StageState::Running`
+
+Use the projection's `completion` only as a tiebreaker when no lifecycle
+events for that stage_id exist (defensive case). The
+`StageState::from(StageOutcome)` impl is at
+`lib/crates/fabro-types/src/outcome.rs:136`.
+
+**API contract**: on `RunStage`, add a required `visit: integer` field, and
+**rename `dot_id` → `node_id`** (required) for consistency with
+`StageId::node_id()`, `EventEnvelope.node_id`, and the rest of the type
+vocabulary. Tighten the `id` description to call out the `node_id@visit`
+form. This is a breaking field rename; per project policy
+("simplest change possible, we don't care about migration"), we do it now
+rather than carrying both names.
+
+**Frontend**: links and selection already use `stage.id`, so they propagate
+naturally once the API returns `verify@1`/`verify@2`. The events-fallback
+filter switches from `e.node_id === stageId` to `e.stage_id === stageId`.
+Sidebar/header append `(N)` only when `visit > 1`. The
+`isVisibleStage(stage.id)` filter switches to `isVisibleStage(stage.node_id)`
+so that `start@1`/`exit@1` are still hidden.
+
+One fixture run with two visits of the same node is added to demo data so
+this code path stays under test.
+
+## Files to change (in order)
+
+### 1. OpenAPI — `docs/public/api-reference/fabro-api.yaml`
+
+`RunStage` schema (line 6315):
+- `id`: clarify description: `StageId in "node_id@visit" form, e.g. verify@2`. Update example to `verify@2`.
+- Add `visit: { type: integer, format: uint32, minimum: 1, description: "1-based visit count; bumped each time the workflow re-enters this node" }`. Mark required. (`format: uint32` + `minimum: 1` codegens to `NonZeroU32`, matching `StageProjection.first_event_seq` at line 5286–5288 of the spec.)
+- **Rename `dot_id` → `node_id`** and mark required. Description: "Node id in the workflow graph; multiple stages with different visits share the same node_id." Example: `verify`.
+
+### 2. Generated code
+
+- `cargo build -p fabro-api` — regenerates Rust types via `progenitor`.
+- `cd lib/packages/fabro-api-client && bun run generate` — regenerates TS client.
+
+### 3. Workflow lib — `lib/crates/fabro-workflow/src/lib.rs`
+
+Add a sibling to `extract_stage_durations_from_events` (line 89). Leave the
+existing function alone — `finalize.rs:81,506` and `retro.rs:56` operate on a
+single visit per node and shouldn't change. New function:
+
+```rust
+pub fn extract_stage_durations_by_stage_id(
+    events: &[EventEnvelope],
+) -> HashMap<StageId, u64>
+```
+
+Filters `stage.completed`/`stage.failed`, keys by `envelope.stage_id`.
+
+### 4. Server handler — `lib/crates/fabro-server/src/server/handler/billing.rs`
+
+Rewrite `list_run_stages` (lines 38–126):
+
+- Replace `checkpoint.completed_nodes` iteration with
+  `projection.iter_stages()`, collected and sorted by `first_event_seq`.
+- Per stage, build `RunStage`:
+  - `id = stage_id.to_string()`
+  - `node_id = stage_id.node_id().to_string()`
+  - `name = stage_id.node_id().to_string()` (UI adds the suffix)
+  - `visit = NonZeroU32::new(stage_id.visit()).expect("StageId.visit is 1-based")`
+    (generated type is `NonZeroU32` because of `format: uint32` + `minimum: 1`)
+  - `status = stage_status_from_events(events, &stage_id, &projection)`
+    (see Status derivation below)
+  - `duration_secs`: from the new `extract_stage_durations_by_stage_id`.
+- **Status derivation** — replace `active_stage_state_from_events` (line 19)
+  with `stage_status_from_events(events: &[EventEnvelope], stage_id: &StageId,
+  projection: &RunProjection) -> StageState`. Implementation:
+  1. Filter events to those with `envelope.event.stage_id == Some(stage_id)`.
+  2. Find the **latest** lifecycle event among `stage.started`,
+     `stage.retrying`, `stage.completed`, `stage.failed` for that stage_id.
+  3. Map:
+     - `stage.started` → `Running`
+     - `stage.retrying` → `Retrying`
+     - `stage.failed(props)` with `props.will_retry == true` → `Retrying`
+       (a will-retry failure is conceptually mid-retry, even before the
+       `stage.retrying` envelope lands; field defined at
+       `lib/crates/fabro-types/src/run_event/stage.rs:57`)
+     - `stage.failed(props)` with `props.will_retry == false` → `Failed`
+     - `stage.completed` → `StageState::from(StageCompletedProps.status)`
+       (using the existing `From<StageOutcome> for StageState` impl)
+  4. Fallback: if no lifecycle events, use
+     `StageState::from(completion.outcome)` from the projection if present,
+     else `Pending`.
+- Drop the `next_node_id` branch (lines 113–123) entirely — the projection
+  now carries the in-flight stage.
+
+### 5. Demo fixtures — `lib/crates/fabro-server/src/demo/mod.rs:1156`
+
+Suffix existing four IDs with `@1` and set `visit: 1`. Add a 5th entry to
+model a re-run:
+
+```rust
+fn visit(n: u32) -> NonZeroU32 { NonZeroU32::new(n).expect("visit is 1-based") }
+
+RunStage { id: "apply-changes@1".into(), name: "apply-changes".into(),
+           status: Succeeded, duration_secs: Some(118.0),
+           node_id: "apply".into(), visit: visit(1) },
+RunStage { id: "apply-changes@2".into(), name: "apply-changes".into(),
+           status: Running, duration_secs: None,
+           node_id: "apply".into(), visit: visit(2) },
+```
+
+`visit` codegens to `NonZeroU32` (see Section 1) — direct `1`/`2` literals
+won't compile. Use the helper above (or inline
+`NonZeroU32::new(n).unwrap()`).
+
+Both share `node_id: "apply"` so the graph node lights up regardless of
+selection.
+
+### 6. Frontend mapping — `apps/fabro-web/app/lib/stage-sidebar.ts:13`
+
+- Pass through `visit` and `node_id` (renamed from `dot_id`) to the sidebar
+  `Stage` shape.
+- Change filter to `isVisibleStage(stage.node_id)` (line 17) so suffixed IDs
+  still hide `start`/`exit`.
+- Drop the `?? stage.id` fallback (line 21) — `node_id` is now required.
+
+### 7. Sidebar component — `apps/fabro-web/app/components/stage-sidebar.tsx`
+
+- Rename the `dotId` field on `Stage` to `nodeId` (line 21).
+- Add `visit: number` to the `Stage` interface (line 16).
+- Render display label as `${stage.name}` when `visit <= 1`, otherwise
+  `${stage.name} (${visit})` in the `<span>` at line 103.
+- Update any callers reading `stage.dotId` (graph highlighting) to
+  `stage.nodeId`.
+
+### 8. SSE cache invalidation — `apps/fabro-web/app/lib/run-events.ts`
+
+Two fixes here:
+
+1. **Suffixed StageId routing** (`:132`): `stageIdFromPayload` currently
+   returns `payload.node_id`. Once
+   `queryKeys.runs.stageTurns(runId, stageId)` is keyed by `verify@1` (lines
+   84, 95 of the same file), invalidations passing `verify` won't match.
+   - Add `stage_id?: string` to `RunEventPayload` (line 14).
+   - In `stageIdFromPayload`: prefer `payload.stage_id`; fall back to
+     `payload.node_id` for events that don't carry the full StageId (e.g.
+     pre-stage envelopes).
+2. **Add `stage.retrying` to `STAGE_EVENTS`** (line 35). Today the set is
+   `["stage.started", "stage.completed", "stage.failed"]`. The new
+   server-side status logic relies on `stage.retrying`, and the workflow
+   already emits it (`lib/crates/fabro-workflow/src/lifecycle/event.rs:232`).
+   Without this, a selected stage stays visually `failed` until another
+   invalidating event arrives — defeats the P1 fix above.
+
+Tests:
+- An envelope with `stage_id: "verify@2"` and `event: "stage.retrying"`
+  invalidates `stages`, `events`, `graph`, run `detail`, and
+  `stageTurns(runId, "verify@2")`.
+
+### 9. Run-stages route — `apps/fabro-web/app/routes/run-stages.tsx`
+
+- Line 72: change `events.filter((e) => e.node_id === stageId)` to
+  `events.filter((e) => e.stage_id === stageId)`. The filter narrows the
+  scope so `stageId` (the function parameter) is the authoritative StageId
+  inside the loop.
+- Lines 117 and 126: drop the `` ?? `${stageId}@1` `` fallback. Note:
+  `EventEnvelope.stage_id` is generated as `string | null | undefined`
+  (see `lib/packages/fabro-api-client/src/models/run-event.ts:34`), so
+  assigning `stageId: e.stage_id` directly fails typecheck. Use the
+  function parameter instead — after the filter, all surviving events have
+  `stage_id === stageId` by construction:
+  ```ts
+  pendingCommand = { stageId, script, language };
+  ...
+  turns.push({ kind: "command", stageId, ... });
+  ```
+- Header (line ~640): when `selectedStage.visit > 1`, render
+  `${selectedStage.name} (${selectedStage.visit})`.
+
+### 10. Graph aggregation policy — `apps/fabro-web/app/routes/run-overview.tsx:66-77`
+
+Today the graph code maps `Map<dotId, stageId>`; with two visits sharing a
+node_id, the second entry silently overwrites the first, and the status
+sets union all visits. Make the policy explicit:
+
+- **Click target**: open the **latest** visit for that node_id (highest
+  `visit`). Build the map deterministically — `Map.set(nodeId, latestStage.id)`
+  after sorting visits ascending.
+- **Status policy**: *latest visit wins for terminal states; active states
+  win globally.* That is — for a given node, if any visit is `running` or
+  `retrying`, the node renders that active state. Otherwise the node renders
+  the **latest visit's** terminal state. So:
+  - `(failed, running)` → `running` (active wins)
+  - `(failed, succeeded)` → `succeeded` (latest visit wins; failure-then-fix
+    should look healed, not failed)
+  - `(succeeded, failed)` → `failed` (latest visit wins)
+  - `(running, retrying)` → `retrying` (active; pick the latest)
+- The current if/else cascade in run-overview.tsx orders running before
+  failed unconditionally — switch it to a two-step compute: pick the
+  display status per node by the rule above, *then* render once.
+- **Frontend tests**: `(failed, running)` → running color, click → `verify@2`.
+  `(failed, succeeded)` → succeeded color, click → `verify@2`.
+  `(succeeded, failed)` → failed color, click → `verify@2`.
+
+### 11. Tests
+
+- **`lib/crates/fabro-server/src/server/tests.rs`** (alongside existing
+  `list_run_stages_projects_retrying_until_completion` at line 2126): add
+  `list_run_stages_distinguishes_visits` — build a run with two visits of
+  the same node, hit `GET /runs/{id}/stages`, assert two `RunStage`
+  entries with distinct `id`/`visit` and the same `node_id`.
+- **`lib/crates/fabro-server/src/server/tests.rs`**:
+  `list_run_stages_shows_retrying_after_failed_event` — a stage where the
+  latest event is `stage.failed` followed by `stage.retrying` renders as
+  `Retrying`, not `Failed`.
+- **`lib/crates/fabro-server/src/server/tests.rs`**:
+  `list_run_stages_shows_retrying_when_failed_will_retry` — a stage whose
+  *only* lifecycle event so far is `stage.failed { will_retry: true }`
+  (no `stage.retrying` envelope yet) still renders as `Retrying`. Narrower
+  guard for the will_retry branch.
+- **`apps/fabro-web/app/routes/run-stages.test.ts`**: `turnsFromEvents`
+  filters correctly on `stage_id` (verify@1 events vs verify@2 events do
+  not cross-contaminate).
+- **`apps/fabro-web/app/lib/stage-sidebar.test.ts`** (new or existing): map
+  fixture with two `apply-changes` visits → two distinct sidebar entries,
+  display labels `apply-changes` and `apply-changes (2)`.
+- **`apps/fabro-web/app/lib/run-events.test.tsx`**: SSE envelope with
+  `stage_id: "verify@2"` triggers invalidation of
+  `stageTurns(runId, "verify@2")`.
+- **Graph test** (`apps/fabro-web/app/routes/run-overview.test.tsx` or
+  similar): two visits of the same node — graph status follows the
+  cascade, click target is the latest visit.
+
+## Out of scope
+
+- Wiring up the production `/runs/{id}/stages/{stageId}/turns` handler
+  (`lib/crates/fabro-server/src/server/handler/mod.rs:116` is
+  `not_implemented`). The events fallback is doing the work today and will
+  keep doing it; the per-stage filter fix is what unblocks multi-visit
+  display.
+- Per-visit billing breakdown in `get_run_billing` — that path still uses
+  the existing per-node duration map.
+
+## Critical files
+
+- `docs/public/api-reference/fabro-api.yaml` — schema source of truth
+- `lib/crates/fabro-server/src/server/handler/billing.rs` — `list_run_stages`
+- `lib/crates/fabro-types/src/run_projection.rs` — `iter_stages` data source
+- `lib/crates/fabro-workflow/src/lib.rs` — new duration extractor
+- `lib/crates/fabro-server/src/demo/mod.rs` — fixture
+- `apps/fabro-web/app/routes/run-stages.tsx` — events filter + header
+- `apps/fabro-web/app/components/stage-sidebar.tsx` — display label
+- `apps/fabro-web/app/lib/stage-sidebar.ts` — visibility filter + mapping
+- `apps/fabro-web/app/lib/run-events.ts` — SSE cache invalidation
+- `apps/fabro-web/app/routes/run-overview.tsx` — graph aggregation policy
+- `lib/crates/fabro-types/src/outcome.rs` — `From<StageOutcome> for StageState` (already exists; reuse)
+
+## Verification
+
+Build:
+- `cargo build -p fabro-api` — regenerates types from updated YAML
+- `cd lib/packages/fabro-api-client && bun run generate`
+- `cargo build --workspace`
+
+Tests:
+- `cargo nextest run -p fabro-server` — conformance + new tests in
+  `lib/crates/fabro-server/src/server/tests.rs` (distinguish_visits,
+  shows_retrying_after_failed_event, shows_retrying_when_failed_will_retry)
+- `cd apps/fabro-web && bun test && bun run typecheck`
+
+End-to-end (single-visit regression):
+- `fabro server start` → open the demo URL → confirm
+  `detect-drift`/`propose-changes`/`review-changes` show no `(N)` suffix.
+  URLs are `.../stages/detect-drift@1` etc. Graph still highlights correctly.
+
+End-to-end (the fix):
+- Demo: two `apply-changes` rows. Sidebar shows `apply-changes` and
+  `apply-changes (2)`. URLs `.../stages/apply-changes@1` vs
+  `.../stages/apply-changes@2` are distinct and load distinct content. Graph
+  lights up the same `apply` node either way.
+- Real loop run: trigger a workflow that loops `verify` (fail → fix → pass).
+  Confirm two distinct entries with distinct statuses, durations, turns, and
+  command logs (`/stages/verify@1/logs/stdout` vs
+  `/stages/verify@2/logs/stdout`).
+
+API contract:
+- `curl /api/v1/runs/{id}/stages | jq` — `id` contains `@`; `visit` is
+  present and ≥ 1; `node_id` is the bare node id with no `@`. The old
+  `dot_id` field is gone.
+
+Negative checks:
+- Terminal run: no trailing in-flight row.
+- Parallel fanout: still one row per group (parallel branches don't promote
+  to separate `RunStage` entries).
+- Empty checkpoint: empty list, no panic.
+- **Retry mid-flight**: trigger a stage that fails and then retries; sidebar
+  shows `Retrying`, not `Failed`. Confirms P1 regression guard.
+- **SSE liveness**: while a run is active and a stage emits events, the
+  selected stage's turn list updates without a manual refresh — confirms
+  cache invalidation works against suffixed keys.
+
+
+## Completed stages
+- **toolchain**: succeeded
+  - Script: `command -v cargo >/dev/null || { curl --proto '=https' --tlsv1.2 -sSf https://sh.rustup.rs | sh -s -- -y && sudo ln -sf $HOME/.cargo/bin/* /usr/local/bin/; }; cargo --version 2>&1`
+  - Stdout:
+    ```
+    cargo 1.95.0 (f2d3ce0bd 2026-03-21)
+    ```
+  - Stderr: (empty)
+- **preflight_compile**: succeeded
+  - Script: `cargo check -q --workspace 2>&1`
+  - Stdout: (empty)
+  - Stderr: (empty)
+- **preflight_lint**: succeeded
+  - Script: `cargo +nightly-2026-04-14 clippy -q --workspace --all-targets -- -D warnings 2>&1`
+  - Stdout: (empty)
+  - Stderr: (empty)
+
+
+Read the plan file referenced in the goal and implement every step. Make all the code changes described in the plan. Use red/green TDD.

stages/005-implement@1/provider_used.json

@@ -0,0 +1,5 @@
+{
+  "mode": "agent",
+  "provider": "anthropic",
+  "model": "claude-opus-4-7"
+}

stages/005-implement@1/response.md

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+All 4 server-side tests pass:
+- `list_run_stages_distinguishes_visits` (new) — multi-visit verification
+- `list_run_stages_shows_retrying_after_failed_event` (new) — failed→retrying = Retrying
+- `list_run_stages_shows_retrying_when_failed_will_retry` (new) — will_retry=true alone = Retrying
+- `list_run_stages_projects_retrying_until_completion` (existing, updated)
+
+Let me do a final summary of what was done:
+
+## Summary
+
+I implemented every step of the plan with TDD red/green:
+
+### OpenAPI (step 1)
+- `RunStage`: required `id` (now `node_id@visit` form), required `node_id` (renamed from `dot_id`), required `visit: NonZeroU32` (`format: uint32`, `minimum: 1`).
+
+### Generated code (step 2)
+- `cargo build -p fabro-api` regenerated Rust types (`pub node_id: String`, `pub visit: NonZeroU32`).
+- TS client regenerated (`run-stage.ts` updated; once Java was available the regen output exactly matched my hand-edit).
+
+### Workflow lib (step 3)
+- Added `extract_stage_durations_by_stage_id(events) -> HashMap<StageId, u64>` alongside the existing per-node helper.
+
+### Server handler (step 4)
+- Rewrote `list_run_stages`: builds projection via `RunProjection::apply_events(events)`, iterates `iter_stages()` sorted by `first_event_seq`, derives status from the latest lifecycle event for each `stage_id` (with `will_retry` honored on `StageFailed`), uses `extract_stage_durations_by_stage_id`. Removed the `next_node_id` branch and the `checkpoint.completed_nodes` walk.
+- Replaced `active_stage_state_from_events` with `stage_status_from_events` that scans `stage.started`/`stage.retrying`/`stage.completed`/`stage.failed` and falls back to projection completion only when no lifecycle events exist.
+
+### Demo fixtures (step 5)
+- 4 single-visit entries get `@1` suffix; first 4 marked `Succeeded`, fifth `apply-changes@2` marked `Running` to demo the multi-visit path.
+
+### Frontend (steps 6–10)
+- `stage-sidebar.ts`: pass through `visit`/`nodeId`, filter by `node_id`, dropped `?? stage.id` fallback.
+- `stage-sidebar.tsx`: `Stage` interface — `nodeId: string`, `visit: number`; render `${name} (${visit})` when `visit > 1`.
+- `run-events.ts`: added `stage_id?: string` to payload; `stageIdFromPayload` prefers `stage_id`; added `stage.retrying` to `STAGE_EVENTS`.
+- `run-stages.tsx`: filter events by `e.stage_id === stageId`; dropped `@1` fallbacks (use `stageId` parameter); header renders visit suffix when `visit > 1`.
+- `run-overview.tsx`: replaced 3 separate dot-id sets with `aggregateGraphNodeStatus()` (latest active visit wins; otherwise latest visit's terminal state; click target = latest visit).
+
+### Tests (step 11)
+- Server (`tests.rs`): added `list_run_stages_distinguishes_visits`, `list_run_stages_shows_retrying_after_failed_event`, `list_run_stages_shows_retrying_when_failed_will_retry`. Updated existing test to emit scoped events. Added `append_scoped_stage_event` helper.
+- Web tests:
+  - `lib/run-events.test.tsx`: `queryKeysForRunEvent` covers `stage.retrying`; SSE envelope with `stage_id: verify@2` invalidates `stageTurns(runId, "verify@2")` and not `verify`.
+  - `lib/stage-sidebar.test.ts` (new): map two visits → distinct entries; visibility filter on `node_id`; `aggregateGraphNodeStatus` covers all four cascade cases.
+  - `routes/run-stages.test.ts`: `turnsFromEvents` filters on `stage_id` (no cross-contamination between `verify@1`/`verify@2`); command turn carries the requested `stageId` without `@1` fallback.
+
+### Verification
+- `cargo build --workspace` ✅
+- `cargo nextest run --workspace` ✅ (5066 pass, 0 fail)
+- `cargo +nightly-2026-04-14 clippy --workspace --all-targets -- -D warnings` ✅
+- `cargo +nightly-2026-04-14 fmt --check --all` ✅
+- `bun run typecheck` ✅
+- `bun test` ✅ (165 pass, up from 152)