fix: stop extracting patterns at command flags and revert command-validation changes

webview-ui/src/utils/command-parser.ts

@@ -41,7 +41,7 @@ export function extractPatternsFromCommand(command: string): string[] {
 }
 
 function isValidToken(token: string): boolean {
-	return !!token && !token.match(/[/\\~:]/) && token !== "." && !token.match(/\.\w+$/)
+	return !!token && !token.startsWith("-") && !token.match(/[/\\~:]/) && token !== "." && !token.match(/\.\w+$/)
 }
 
 function extractFromTokens(tokens: string[], patterns: Set<string>): void {

webview-ui/src/utils/command-validation.ts

@@ -1,5 +1,7 @@
 import { parse } from "shell-quote"
 
+type ShellToken = string | { op: string } | { command: string }
+
 /**
  * # Command Denylist Feature - Longest Prefix Match Strategy
  *
@@ -70,38 +72,183 @@ import { parse } from "shell-quote"
 export function parseCommand(command: string): string[] {
 	if (!command?.trim()) return []
 
-	try {
-		const parsed = parse(command)
-		const commands: string[] = []
-		let currentCommand: string[] = []
+	// Split by newlines first (handle different line ending formats)
+	// This regex splits on \r\n (Windows), \n (Unix), or \r (old Mac)
+	const lines = command.split(/\r\n|\r|\n/)
+	const allCommands: string[] = []
 
-		for (const token of parsed) {
-			if (typeof token === "object" && "op" in token) {
-				// Chain operator - split command
-				if (["&&", "||", ";", "|"].includes(token.op)) {
-					if (currentCommand.length > 0) {
-						commands.push(currentCommand.join(" "))
-						currentCommand = []
-					}
-				} else {
-					// Other operators are part of the command
-					currentCommand.push(token.op)
+	for (const line of lines) {
+		// Skip empty lines
+		if (!line.trim()) continue
+
+		// Process each line through the existing parsing logic
+		const lineCommands = parseCommandLine(line)
+		allCommands.push(...lineCommands)
+	}
+
+	return allCommands
+}
+
+/**
+ * Parse a single line of commands (internal helper function)
+ */
+function parseCommandLine(command: string): string[] {
+	if (!command?.trim()) return []
+
+	// Storage for replaced content
+	const redirections: string[] = []
+	const subshells: string[] = []
+	const quotes: string[] = []
+	const arrayIndexing: string[] = []
+	const arithmeticExpressions: string[] = []
+	const variables: string[] = []
+	const parameterExpansions: string[] = []
+	const processSubstitutions: string[] = []
+
+	// First handle PowerShell redirections by temporarily replacing them
+	let processedCommand = command.replace(/\d*>&\d*/g, (match) => {
+		redirections.push(match)
+		return `__REDIR_${redirections.length - 1}__`
+	})
+
+	// Handle arithmetic expressions: $((...)) pattern
+	// Match the entire arithmetic expression including nested parentheses
+	processedCommand = processedCommand.replace(/\$\(\([^)]*(?:\)[^)]*)*\)\)/g, (match) => {
+		arithmeticExpressions.push(match)
+		return `__ARITH_${arithmeticExpressions.length - 1}__`
+	})
+
+	// Handle parameter expansions: ${...} patterns (including array indexing)
+	// This covers ${var}, ${var:-default}, ${var:+alt}, ${#var}, ${var%pattern}, etc.
+	processedCommand = processedCommand.replace(/\$\{[^}]+\}/g, (match) => {
+		parameterExpansions.push(match)
+		return `__PARAM_${parameterExpansions.length - 1}__`
+	})
+
+	// Handle process substitutions: <(...) and >(...)
+	processedCommand = processedCommand.replace(/[<>]\([^)]+\)/g, (match) => {
+		processSubstitutions.push(match)
+		return `__PROCSUB_${processSubstitutions.length - 1}__`
+	})
+
+	// Handle simple variable references: $varname pattern
+	// This prevents shell-quote from splitting $count into separate tokens
+	processedCommand = processedCommand.replace(/\$[a-zA-Z_][a-zA-Z0-9_]*/g, (match) => {
+		variables.push(match)
+		return `__VAR_${variables.length - 1}__`
+	})
+
+	// Handle special bash variables: $?, $!, $#, $$, $@, $*, $-, $0-$9
+	processedCommand = processedCommand.replace(/\$[?!#$@*\-0-9]/g, (match) => {
+		variables.push(match)
+		return `__VAR_${variables.length - 1}__`
+	})
+
+	// Then handle subshell commands
+	processedCommand = processedCommand
+		.replace(/\$\((.*?)\)/g, (_, inner) => {
+			subshells.push(inner.trim())
+			return `__SUBSH_${subshells.length - 1}__`
+		})
+		.replace(/`(.*?)`/g, (_, inner) => {
+			subshells.push(inner.trim())
+			return `__SUBSH_${subshells.length - 1}__`
+		})
+
+	// Then handle quoted strings
+	processedCommand = processedCommand.replace(/"[^"]*"/g, (match) => {
+		quotes.push(match)
+		return `__QUOTE_${quotes.length - 1}__`
+	})
+
+	let tokens: ShellToken[]
+	try {
+		tokens = parse(processedCommand) as ShellToken[]
+	} catch (error: any) {
+		// If shell-quote fails to parse, fall back to simple splitting
+		console.warn("shell-quote parse error:", error.message, "for command:", processedCommand)
+
+		// Simple fallback: split by common operators
+		const fallbackCommands = processedCommand
+			.split(/(?:&&|\|\||;|\|)/)
+			.map((cmd) => cmd.trim())
+			.filter((cmd) => cmd.length > 0)
+
+		// Restore all placeholders for each command
+		return fallbackCommands.map((cmd) => {
+			let result = cmd
+			// Restore quotes
+			result = result.replace(/__QUOTE_(\d+)__/g, (_, i) => quotes[parseInt(i)])
+			// Restore redirections
+			result = result.replace(/__REDIR_(\d+)__/g, (_, i) => redirections[parseInt(i)])
+			// Restore array indexing expressions
+			result = result.replace(/__ARRAY_(\d+)__/g, (_, i) => arrayIndexing[parseInt(i)])
+			// Restore arithmetic expressions
+			result = result.replace(/__ARITH_(\d+)__/g, (_, i) => arithmeticExpressions[parseInt(i)])
+			// Restore parameter expansions
+			result = result.replace(/__PARAM_(\d+)__/g, (_, i) => parameterExpansions[parseInt(i)])
+			// Restore process substitutions
+			result = result.replace(/__PROCSUB_(\d+)__/g, (_, i) => processSubstitutions[parseInt(i)])
+			// Restore variable references
+			result = result.replace(/__VAR_(\d+)__/g, (_, i) => variables[parseInt(i)])
+			return result
+		})
+	}
+
+	const commands: string[] = []
+	let currentCommand: string[] = []
+
+	for (const token of tokens) {
+		if (typeof token === "object" && "op" in token) {
+			// Chain operator - split command
+			if (["&&", "||", ";", "|"].includes(token.op)) {
+				if (currentCommand.length > 0) {
+					commands.push(currentCommand.join(" "))
+					currentCommand = []
 				}
-			} else if (typeof token === "string") {
+			} else {
+				// Other operators (>, &) are part of the command
+				currentCommand.push(token.op)
+			}
+		} else if (typeof token === "string") {
+			// Check if it's a subshell placeholder
+			const subshellMatch = token.match(/__SUBSH_(\d+)__/)
+			if (subshellMatch) {
+				if (currentCommand.length > 0) {
+					commands.push(currentCommand.join(" "))
+					currentCommand = []
+				}
+				commands.push(subshells[parseInt(subshellMatch[1])])
+			} else {
 				currentCommand.push(token)
 			}
 		}
-
-		// Add any remaining command
-		if (currentCommand.length > 0) {
-			commands.push(currentCommand.join(" "))
-		}
-
-		return commands
-	} catch (_error) {
-		// If shell-quote fails, fall back to simple splitting
-		return [command]
 	}
+
+	// Add any remaining command
+	if (currentCommand.length > 0) {
+		commands.push(currentCommand.join(" "))
+	}
+
+	// Restore quotes and redirections
+	return commands.map((cmd) => {
+		let result = cmd
+		// Restore quotes
+		result = result.replace(/__QUOTE_(\d+)__/g, (_, i) => quotes[parseInt(i)])
+		// Restore redirections
+		result = result.replace(/__REDIR_(\d+)__/g, (_, i) => redirections[parseInt(i)])
+		// Restore array indexing expressions
+		result = result.replace(/__ARRAY_(\d+)__/g, (_, i) => arrayIndexing[parseInt(i)])
+		// Restore arithmetic expressions
+		result = result.replace(/__ARITH_(\d+)__/g, (_, i) => arithmeticExpressions[parseInt(i)])
+		// Restore parameter expansions
+		result = result.replace(/__PARAM_(\d+)__/g, (_, i) => parameterExpansions[parseInt(i)])
+		// Restore process substitutions
+		result = result.replace(/__PROCSUB_(\d+)__/g, (_, i) => processSubstitutions[parseInt(i)])
+		// Restore variable references
+		result = result.replace(/__VAR_(\d+)__/g, (_, i) => variables[parseInt(i)])
+		return result
+	})
 }
 
 /**