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Author SHA1 Message Date
huangsen
b72690d954 feat: add Neo4j backend and refactor file graph architecture 
- add neo4j dependency to project requirements
- introduce NetworkXFileGraph to replace LocalFileGraph implementation
- rename local_file_graph.py to networkx_file_graph.py with updated
  component registration as 'networkx'
- remove pickle persistence logic from NetworkX backend, simplify
  initialization
- update Neo4jFileGraph to return FileLink objects instead of
  (FileNode, FileLink) tuples from get_inlinks/get_outlinks methods
- remove unused AsyncIterator import and adjust method signatures
- add BareFileParser for handling binary/attachment files without
  content parsing
- move wikilink resolution utilities to dedicated utility module
- refactor memory I/O to use file graph's link resolution methods
  directly
- remove link extraction utilities from schema module, consolidate
  in utils.wikilink_resolver
 2026-05-14 19:46:18 +08:00
huangsen
6a5561f86a feat: add file_graph component and integrate with LinkedFileParser 
- Add file_graph import to component registry
- Register FILE_GRAPH enum in ComponentEnum
- Implement BaseFileGraph integration in LinkedFileParser
- Replace FileEdge with FileLink for better semantic clarity
- Add lazy resolution of file_graph from app_context
- Update file watcher logging to reflect links instead of edges

refactor: streamline MCP transport layer architecture

- Remove redundant step shells from reme2/mcp/steps/
- Consolidate all @R.register components to reme2.memory package
- Update server.py to import reme2.memory directly
- Revise README.md to document new architecture
- Simplify module dependencies and import structure
 2026-05-14 11:35:02 +08:00
huangsen
8465f6d06e ``` 
docs(protocol): add typed edge link protocol documentation

Add comprehensive documentation for the link protocol supporting
typed edges in body text. This includes specification for three
legal inline forms (bare wikilink, line-level Dataview,
inline-bracketed Dataview), predicate syntax rules, and the
machine-managed Relations section convention for organizing
discovered edges.

fix(memory): update path reference from vault_root to working_dir

Change the memory_create operation's path anchoring from
vault_root to working_dir to maintain consistency with the
current working directory configuration.

refactor(components): remove edge_extractor module and simplify parsing

Remove the edge_extractor component module entirely and
inline edge extraction logic directly into LinkedFileParser
using parse_wikilinks utility. This simplifies the architecture
by eliminating the separate edge extraction component and
delegating edge discovery to the maintainer's enrichment operations.

feat(parser): update parse method signature and simplify edge extraction

Modify LinkedFileParser to return (FileNode, list[FileChunk])
tuple instead of ParsedFile, remove dependency on BaseEdgeExtractor,
and implement direct wikilink parsing from body text only.
```
 2026-05-11 19:45:53 +08:00