* feat: rename working_dir to vault_dir and update documentation
- Rename working_dir to vault_dir across the application
- Update documentation to reflect vault_dir instead of working_dir
- Change FileFrontMatter title field to name field
- Update .gitignore to include vault directory
- Modify file path descriptions to reference vault instead of working_dir
- Update related configuration and property names accordingly
* refactor(steps): rename working_path to vault_path in CRUD operations
- Rename parameter from `working_path` to `vault_path` in `resolve_path` function
- Update all usages in append, edit, read, and write steps to use `self.vault_path`
- Update documentation comments to reflect the new parameter name
- Update docstring in read.py to mention `vault_dir` instead of `vault`
test(chunked_file_parser): update frontmatter field from title to name
- Change frontmatter field from `title` to `name` in test cases
- Update comment in background steps test to reference `vault_path` instead of `working_path`
* refactor(schema): remove unused ResourceEntry import
* feat(file_graph): add link scope filtering to get_inlinks/get_outlinks
* feat(file-store): add scope parameter to link methods
- Add comprehensive Markdown kernel section covering Obsidian compatibility
- Include detailed explanation of YAML front matter and wikilink formats
- Document smart slicing mechanism using Markdown AST instead of fixed tokens
- Explain graph indexing with bidirectional links and multiple backends
- Restructure sections with proper numbering from 4 to 7
- Move Markdown kernel section to appear before self-evolution features
- Add detailed explanations of auto-memory, auto-dream, and auto-link processes
- Document three-way hybrid search with RRF fusion and progressive expansion
- Include engineering value explanations for keyword indexing in Chinese context
* docs(cli): add comprehensive CLI commands documentation
- Document CLI entry point and argument parsing mechanism
- Add detailed command reference with parameters and behaviors
- Include usage examples for common operations like start, search, and reindex
- Describe backend options and service configuration overrides
- Explain local vs server-side command execution patterns
- Provide table format documentation for all available actions
* docs(reme_design): update CLI command documentation with detailed action descriptions
- Rename section from "CLI 指令" to "基础Job" and add author attribution
- Add comprehensive table documenting all available actions with parameters and behaviors
- Include detailed explanations for input/output parameters, defaults, and internal workflows
- Update example usage commands with proper parameter passing syntax
- Add metadata information for each action including health checks and component details
- Clarify the difference between local actions and server-forwarded actions
- Document the new list action that intercepts at client side without forwarding to server
