Add support for `paths=None` in `get_nodes` method to return all real
nodes as the graph's "scan everything" entry point. When `paths` is
explicitly passed as an empty list, returns empty list. Virtual
placeholders are filtered out in both cases.
BREAKING CHANGE: The `get_nodes` method signature changed from
requiring a list of paths to accepting an optional list or None.
refactor(memory): move runtime_response imports to steps package
Move runtime_response imports from memory package to steps package to
improve code organization and reduce circular dependencies.
refactor(config): update obsidian configuration table structure
Update the obsidian configuration markdown table to improve clarity
and fix incorrect section headings. Change 'stat/list' to 'file' and
'return specific tag info' to 'tags' section with proper commands.
chore(memory): remove deprecated toolkit modules
Remove deprecated agent_toolkit.py, file_toolkit.py, and
graph_toolkit.py modules as functionality has been moved to steps
package.
feat(steps): add new CRUD file operations
Add new steps for file operations including file_download and
file_list operations with proper path resolution and filtering
capabilities.
docs(protocol): add typed edge link protocol documentation
Add comprehensive documentation for the link protocol supporting
typed edges in body text. This includes specification for three
legal inline forms (bare wikilink, line-level Dataview,
inline-bracketed Dataview), predicate syntax rules, and the
machine-managed Relations section convention for organizing
discovered edges.
fix(memory): update path reference from vault_root to working_dir
Change the memory_create operation's path anchoring from
vault_root to working_dir to maintain consistency with the
current working directory configuration.
refactor(components): remove edge_extractor module and simplify parsing
Remove the edge_extractor component module entirely and
inline edge extraction logic directly into LinkedFileParser
using parse_wikilinks utility. This simplifies the architecture
by eliminating the separate edge extraction component and
delegating edge discovery to the maintainer's enrichment operations.
feat(parser): update parse method signature and simplify edge extraction
Modify LinkedFileParser to return (FileNode, list[FileChunk])
tuple instead of ParsedFile, remove dependency on BaseEdgeExtractor,
and implement direct wikilink parsing from body text only.
```
feat(file_watcher): add directory deletion support with descendant indexing
Add support for deleting entire directories and their indexed descendants
in the file watcher. Previously only individual file deletions were
handled properly. Now when a directory is deleted, the system finds all
indexed files beneath that directory path and removes them along with
their metadata and chunks.
The implementation includes:
- New `_descendant_indexed_paths` method to find all indexed files
under a given directory path
- Updated `_on_deleted` method to process both the target path and
all its indexed descendants
- Proper handling of symlinks and path resolution differences
- Enhanced logging to show directory deletion with child count
Also adds necessary os import for path operations.
refactor(config): restructure configuration profiles for clarity
Rename curated.yaml to remove outdated configuration file and
rename full.yaml to expert.yaml with updated documentation.
Add new service.yaml configuration profile that provides a
service-aligned MCP surface with three main tools:
- retrieve: graph-aware hybrid retrieval
- remember: single write entry point with log/distill modes
- maintain: vault hygiene sweep
The expert configuration now excludes the ingest tool since
cold-path operations are handled by external agents, and adds
memory_lint tool for structural issue detection.
Updated documentation to clarify the different configuration
profiles and their intended usage patterns.
```
