Commit graph

10 commits

Author SHA1 Message Date
xyf2020
06fb46fa48
feat(tags): add configurable tag indexing and filtered hybrid search (#530)
* Add optional tag generation and normalization to auto memory

* Add tag index components and clean up temporary JSONL files

* Preserve tag index state when reconciliation fails

* Refactor and streamline application implementation

* Fix pylint C1803 warnings in tag normalization tests

* Document optional tag index configuration

* Make tag index failures non-blocking and disable auto-memory tags

* Add configurable tag indexing and tag listing

* Add tag-filtered hybrid search with exact candidate ranking

* Remove obsolete generated files

* Rename tag index key to tag_key and reject reserved fields

* Extract automatic tagging into a dedicated step

* Restrict frontmatter updates to authorized keys

* Refine tag filtering and automatic memory tagging

* Require underscore-separated tags in auto-tag prompts

- Forbid spaces in tags and require underscores (e.g. sam_altman) in both
  English and Chinese auto_tag prompts, with English examples switched to
  English entities (OpenAI, gold)
- Drop prompt-string assertions superseded by the new tagging rule
- Merge construction/runtime tag_key validation tests into one parametrized case

* Make max_tags_per_file configurable in auto-tag step

* Consolidate tag index tests

* Fix search test fixture lint warnings

* Align tag contracts and index health behavior

* Fall back when tag index is unavailable

---------

Co-authored-by: jinli.yl <jinli.yl@alibaba-inc.com>
2026-09-10 18:01:09 +08:00
xyf2020
3f2eb6235f
feat(benchmark): extract BEAM and LongMemEval into standalone plugins (#512)
* Simplify project implementation

* Centralize benchmark agentic answer base class

* Remove bundled ReMe source snapshots

* Preserve local benchmark configs and plugin discovery behavior

* docs: enrich job parameter descriptions in beam and lme plugin configs

* Simplify project structure and remove obsolete code

* Move benchmark search step configuration into BEAM and LME plugins

* Rename benchmark judge packages to avoid import collisions

* Remove explicit plugin package loading in favor of entry-point discovery

* Export benchmark plugin Steps from public packages
2026-09-03 14:06:39 +08:00
jinliyl
fc4a5398a8
fix(index): make embedding rebuild explicit and scoped (#508)
* fix(index): make embedding rebuild explicit and scoped

* fix(index): harden scoped reindex completion

* fix(index): guard embedding space transitions

* fix(index): serialize reindex with mutations

* docs(index): clarify scoped reindex semantics

* docs(index): explain synchronous checkpoint snapshots

* fix(index): serialize checkpoint publication
2026-08-28 23:25:17 +08:00
jinliyl
9218a2d0e3
refactor: derive dialog paths from session_dir (#421)
* refactor: derive dialog paths from session directory

* fix: normalize configured session paths

* fix: align dialog watch paths with writers

* fix: reject absolute session directories
2026-08-06 17:07:14 +08:00
jinliyl
eac8223387
feat: add frontend-ready wikilink graph APIs (#414) 2026-08-05 16:45:50 +08:00
xyf2020
4eb2adf961
feat(faiss_file_store): upgrade FAISS to HNSW index with async reindex (#390)
* feat(file_store): upgrade FAISS to HNSW index with async reindex and path constraint

- Replace IndexFlatIP with IndexHNSWFlat for better recall/speed tradeoff
- Add dynamic efSearch (limit * 5) scaled to query request size
- Add async_reindex option: background rebuild with generation-based invalidation
- Extract _delete_nodes() in LocalFileStore for subclass reuse
- Add unit tests for file store consistency

* fix: resolve pylint warnings in faiss store and test file

* refactor(file_store): replace generation-based reindex with event-flag worker

- Replace _reindex_generation/lock/task with a single long-lived worker
  coroutine consuming an asyncio.Event flag; repeated submissions coalesce
- Use local index reference in vector_search to avoid TOCTOU on self._faiss_index
- Pass index explicitly to _set_ef_search for consistency
- Track _index_writes to re-arm reindex after concurrent writes
- Update tests to match new internal API

* fix: resolve pylint too-many-return-statements and implicit-booleaness warnings

* feat(file_store): add refine maintenance hook and incremental embedding backfill

- Add refine() idle-time maintenance hook to BaseFileStore/LocalFileStore
- FaissLocalFileStore: incremental vector add on backfill instead of full rebuild
- Dynamic tombstone compaction threshold scaled by index size
- Add RefineStoreStep with daily cron job (refine_store_cron)
- Enable faiss backend and embedding_store by default in default.yaml
- Add unit tests for faiss index maintenance

* chore(deps): promote faiss-cpu to core dependencies

faiss backend is now the default file_store, so faiss-cpu moves from
the optional [core] extra to the base dependencies list.

* feat: rename refine_store to optimize_index and add vecdb_path_constraint

- Rename refine_store step to optimize_index with cron job scheduling
- Add vecdb_path_constraint to file_store components
- Update default.yaml with optimize_index_cron and faiss backend comment
- Update memory_search docs (en/zh) for FAISS vector management
- Update unit tests for index maintenance

* feat(faiss): add embedding digest to reject stale sidecar after partial dump

Add _chunks_embedding_digest() that computes an order-independent SHA-256
over (chunk_id, float16 embedding) pairs. The digest is written into the
idmap sidecar at dump time and verified at load time. A mismatch means the
sidecar vectors belong to a different chunk generation than the authoritative
JSONL — detectable even when the live-ID set is unchanged (same-ID in-place
update crash window).

Add test_faiss_rejects_stale_sidecar_after_partial_dump reproducing the
crash-between-writes scenario and asserting digest-based rejection.

Compress verbose docstrings/comments in existing tests for pylint line
budget.

---------

Co-authored-by: sa-buc <jiangniurou.xyf@dail-algo011164204033.ET135>
2026-07-27 19:54:38 +08:00
xyf2020
630f26b119
feat(search): scoped dedup, session-chunk merge, and unified recall formatting (#384)
* feat(search): add tool_context-scoped chunk dedup with TTL

Introduce _ToolContextDedupMixin shared by search/vector_search/bm25_search
to skip already-seen chunks within one agent tool_context. Per-context state
lives in app_context.metadata with configurable TTL (default 24h).

* feat(search): unify chunk answer rendering with merge and explicit empty messages

- Refactor SearchStep/VectorSearchStep/Bm25SearchStep to share format_chunks_answer for consistent source rendering and adjacent session-chunk merging.

- Distinguish empty results: ALL_RETURNED_MESSAGE when dedup removes everything vs NO_RESULTS_MESSAGE when nothing matched.

- Bump JsonlFileChunker default max_chars to 4000.

- Add unit tests for source-format merge and empty-result messages.

* refactor(config): reorganize file_chunker components and move jsonl max_chars into config

- Register explicit markdown/json/jsonl chunkers in beam.yaml and lme.yaml with markdown options (embed_toc, max_ast_sections, frontmatter handling) and jsonl max_chars=4000.

- Restrict default chunker to txt/log extensions.

- Revert JsonlFileChunker code default max_chars back to 2000; the 4000 value now lives in config.

* chore(benchmark): increase longmemeval num_items from 64 to 500

* refactor(search): split SearchStep into simplified and v2 variants, extract counter utility

- Extract global_counter_next from ApplicationContext into reme/utils/counter.py
  as a standalone function operating on metadata dict with lazy initialization.

- Split SearchStep into two variants:
  - SearchStep (simplified): inline chunk.id dedup, single-branch vector/keyword
    optimization based on vector_weight, inline answer formatting.
  - SearchV2Step (full): preserves _ToolContextDedupMixin with interval-subset-aware
    dedup and format_chunks_answer with session-aware chunk merging.

- Update beam.yaml and lme.yaml to use search_v2_step for benchmark jobs.

- Rename existing search tests to test_search_v2_step_* and add new
  test_search_step_* tests covering the simplified variant.

* fix: normalise missing trailing newline in _build_union_chunk to prevent line collision

* refactor: lazy-init counter tree in ApplicationContext metadata

- Remove hardcoded _counter_tree and _counter_tree_lock initialization
  from ApplicationContext.metadata; rely on lazy initialization in
  reme.utils.counter.global_counter_next on first call
- Set longmemeval num_items back to 500
- Remove obsolete trailing-newline collision tests

---------

Co-authored-by: sa-buc <jiangniurou.xyf@dail-algo011164204033.ET135>
2026-07-22 17:17:23 +08:00
jinliyl
bf7ca17705
feat(benchmark): add LongMemEval golden answer validation (#335)
* feat(benchmark): add golden answer validation and session review for LongMemEval

- Introduce GoldenCheckStep to validate LongMemEval golden answers using structured verdicts
- Add SessionReviewStep to extract query/answer-relevant evidence from all sessions
- Implement concurrent session processing with configurable concurrency limits
- Create check_golden job configuration with lme_review and lme_judge agent wrappers
- Add Qwen3.7-plus model configuration for enhanced processing capabilities
- Include python_execute tool integration for agent-based reasoning and date validation
- Generate comprehensive JSON output with session summaries and validation verdicts
- Add run_check_golden.py script for batch processing across all LongMemEval samples
- Configure proper logging initialization with console and file output options
- Update component registry and file I/O modules to support new benchmark features

* feat(scripts): add script to summarize LongMemEval check_golden verdicts

- Parse check_golden.json files across all LongMemEval samples
- Calculate accuracy metrics for golden answers and session IDs
- Provide breakdown by question type with percentage calculations
- Add command line options for listing bad samples and JSON output
- Include progress tracking showing completed vs pending samples
- Display confidence scores and date sanity checks statistics

* refactor(benchmark): move golden check scripts to longmemeval directory

- Moved run_check_golden.py from scripts/ to benchmark/longmemeval/
- Moved stats_check_golden.py from scripts/ to benchmark/longmemeval/
- Updated path resolution to use parents[2] instead of parent.parent
- Added new --list-run-failed option to stats script
- Added logging directory constant and functions for tracking launched samples
- Enhanced stats output with launched count and run failure information
- Improved error reporting with run failure details and log file paths

* feat(benchmark): add LongMemEval agentic answer workflow with session extraction

- Add LmeAgenticAnswerStep, LmeAutoMemoryStep, and LmeExtractSessionStep to __init__.py
- Create shared helper render_with_source for displaying search results with session_id
- Implement agentic_answer step with vector_search, bm25_search, and extract_session_by_id tools
- Add auto_memory step to convert each session into search-friendly daily notes
- Create extract_session step to retrieve and analyze raw session content by session_id
- Update jinli_lme.yaml with auto_memory, vector_search, bm25_search, and agentic_answer jobs
- Configure lme_memory, lme_extract, and lme_agentic_answer agent wrappers
- Enhance search steps with include_source option to show session_id metadata
- Add proper session_id tracking and collision handling in daily note generation

* feat(benchmark): add LongMemEval agentic answer evaluation pipeline

- Add session_id tracking to agentic_answer.py result metadata
- Introduce run_agentic_answer.py driver for complete pipeline execution
- Implement auto_memory, update_index, and agentic_answer job orchestration
- Add concurrent execution with configurable limits and staggering
- Create aggregation script for collecting tool-call trails and results
- Add stats_agentic_answer.py for comprehensive result analysis
- Implement resume capability with existing output detection
- Generate aggregate.json with per-sample breakdown and tool call summaries

* feat(steps): add ClearPathsStep for cleaning workspace outputs before rebuild

- Introduce ClearPathsStep to remove stale workspace files/directories
- Add support for specifying paths and config_keys as targets to clear
- Implement safety checks to prevent deletion of files outside workspace
- Add logging for cleared paths and warnings for invalid paths
- Configure clear_paths_step in jinli_lme.yaml to clean daily_dir
- Add clear_paths_step to clean mem_answer.json before rebuilds

* feat(benchmark): add resume functionality to agentic answer runner

- Replace --force flag with --resume flag for controlling job execution
- By default every job reruns with clean rebuild behavior using config clear steps
- Add --resume option to skip samples whose output already exists and continue interrupted batches
- Update documentation to reflect new default clean rebuild behavior
- Modify job skipping logic to honor resume flag instead of force flag
- Update dry-run output to show correct todo jobs based on resume status
- Change default example command to use --resume for continuing interrupted runs

* feat(benchmark): generate JSONL output for check golden records

- Add write_check_golden_list function to create JSONL file
- Write all readable check_golden records as JSONL format
- Include check_golden_list path in stats output
- Display generated JSONL file path in summary report
- Maintain UTF-8 encoding with non-ASCII character support

* refactor(benchmark): rename answer judge step and integrate LME LLM judge

- Rename AnswerJudgeStep to LmeLlmJudgeStep and update imports
- Add new llm_judge configuration in jinli_lme.yaml
- Update run_agentic_answer.py to include llm_judge in pipeline
- Modify LmeLlmJudgeStep to read from query.json and answer.json
- Write LLM judgement results back to mem_answer.json
- Add command line options for start/end sample range selection
- Update aggregate.json generation to include LLM judgement data
- Add resume capability for llm_judge job based on judgement presence

* refactor(benchmark): rename answer judge step and integrate LME LLM judge

- Rename AnswerJudgeStep to LmeLlmJudgeStep and update imports
- Add new llm_judge configuration in jinli_lme.yaml
- Update run_agentic_answer.py to include llm_judge in pipeline
- Modify LmeLlmJudgeStep to read from query.json and answer.json
- Write LLM judgement results back to mem_answer.json
- Add command line options for start/end sample range selection
- Update aggregate.json generation to include LLM judgement data
- Add resume capability for llm_judge job based on judgement presence

* feat(steps): add wait_for_paths_step to block until workspace files exist

- Introduce WaitForPathsStep class that polls for required workspace-relative paths
- Add step registration with 'wait_for_paths_step' backend identifier
- Implement path validation to ensure targets are within workspace boundaries
- Add polling mechanism with configurable intervals via poll_seconds parameter
- Include logging functionality with log_every_seconds parameter for status updates
- Add metadata tracking of waited paths and duration in response object
- Register step in index module and expose in public API
- Configure step in jinli_lme.yaml to wait for session_review.json before golden check
- Add script rename from run_check_golden.py to run_golden_check.py with enhanced options

* feat(benchmark): enhance longmemeval benchmarking with concurrency and progress tracking

- Add benchmark extra dependency group with portalocker requirement
- Introduce concurrent execution support for golden_check and session_review workflows
- Add progress reporting interval option with real-time status updates
- Implement global throttling mechanism for session review requests using file locks
- Enhance golden check validation with current schema verification
- Add active task tracking and graceful shutdown handling
- Rename check_golden scripts to golden_check for consistency
- Update statistics reporting with correct/incorrect terminology instead of reasonable
- Add stale format detection and compatibility handling for verdict fields
- Include both_correct rate calculation in accuracy metrics
- Add concurrency and staggering options for better resource management

* ci(workflow): add Windows smoke test workflow

- Create new workflow file .github/workflows/windows-smoke.yml
- Configure workflow to trigger on push and pull request events
- Set up Python environment with version 3.11
- Install package dependencies using pip
- Run version job as smoke test for CLI functionality
- Enable concurrency control to prevent duplicate runs
- Use matrix strategy for Python version testing

* feat(benchmark): add retry mechanism and health check for session review

- Added retry configuration options (retry_initial_seconds, retry_max_seconds, retry_max_attempts) to jinli_lme.yaml
- Implemented exponential backoff retry logic with configurable parameters in session_review step
- Added output_is_healthy function to verify session_review.json integrity and absence of failed reviews
- Updated resume functionality to skip only healthy outputs instead of all existing files
- Integrated JSON parsing and validation to check for failed reviews in output files
- Enhanced error handling and logging for retry attempts and recovery scenarios

* feat(benchmark): add LongMemEval session review statistics script

- Create stats_session_review.py to summarize session_review.json artifacts
- Add command line options for listing failed, missing, and run failed samples
- Implement JSON output mode for programmatic consumption
- Calculate and display health statistics including total samples, healthy outputs, failed sessions
- Provide detailed failure information with session IDs and error messages
- Generate re-run commands for samples with failed reviews
- Add percentage calculations for better statistical overview
- Include support for multiple output formats and detailed logging

* feat(benchmark): add LongMemEval output cleanup script and enhance golden check retry logic

- Added clean_sample_outputs.py script to remove generated LongMemEval files while preserving source inputs
- Implemented configurable retry mechanism in golden_check.py with exponential backoff strategy
- Added retry parameters (initial/max seconds and max attempts) to control failure recovery behavior
- Integrated asyncio support for asynchronous sleep during retry intervals
- Configured default retry settings in jinli_lme.yaml with 5s initial and 300s maximum intervals
- Preserved core files (query.json, answer.json, session/) while cleaning generated artifacts

* feat(benchmark): add AppleDouble file cleanup to sample output cleaner

- Remove AppleDouble files starting with '._' recursively including under session/
- Add is_under helper function to check if path is inside parent directory
- Track targets in set to avoid duplicate processing
- Include AppleDouble files in cleanup targets when not already covered by existing targets
- Maintain dry-run mode as default behavior with --apply flag for actual deletion

* refactor(benchmark): update LongMemEval sample output cleaning script

- Add time and Iterator imports for enhanced functionality
- Add --progress-every argument to control progress reporting frequency
- Replace is_under function with iter_sample_targets generator
- Implement detailed progress tracking with timing measurements
- Add sample-by-sample processing with elapsed time reporting
- Include AppleDouble file detection within session directory
- Update target counting and deletion statistics display
- Add conditional progress updates based on progress-every setting
- Improve dry-run mode with would-delete indication

* chore(benchmark): increase initial interval for session review step

- Changed START_INTERVAL_SECONDS from 1.0 to 3.0 seconds
- Adjusted timing parameters for better benchmark stability

* refactor(benchmark): implement coordinated retry mechanism for session reviews

- Add retry gate condition to coordinate concurrent review attempts
- Implement wait_for_healthy_start_slot to handle sequential retries
- Create mark_retrying and mark_recovered functions to track retry states
- Update reply_with_retry to accept index parameter for coordination
- Add has_prior_retry logic to prevent race conditions during recovery
- Ensure proper cleanup of retry state on success or failure
- Maintain backward compatibility while adding coordination features

* chore(benchmark): adjust session review start interval timeout

- Changed START_INTERVAL_SECONDS from 3.0 to 5.0 seconds
- Increased initial delay for session review benchmark step
- Updated timeout configuration for improved stability

* refactor(benchmark): update session review concurrency and throttling mechanism

- Replace global throttle with per-process concurrency control
- Add concurrency parameter with default value of 30 in config
- Add start_interval_seconds parameter with default value of 2 seconds
- Change default concurrency from 3 to 1 in command line interface
- Update documentation to reflect new throttling behavior
- Implement semaphore-based concurrency limiting for review tasks
- Modify retry mechanism to use local locking instead of global files
- Remove portalocker dependency for cross-process throttling

* refactor(config): update session review configuration and concurrency settings

- Removed deprecated retry configuration parameters from jinli_lme.yaml
- Increased MAX_CONCURRENCY from 30 to 60 in session_review.py
- Reduced START_INTERVAL_SECONDS from 2.0 to 1.0 in session_review.py
- Cleaned up redundant backend specifications in configuration file
- Simplified agent wrapper configurations by removing obsolete retry settings

* feat(benchmark): enhance LME auto memory step with advanced scheduling and error handling

- Add datetime parsing functionality for LongMemEval timestamps with regex pattern
- Implement configurable concurrency limits with MAX_CONCURRENCY of 60
- Introduce retry mechanism with exponential backoff for agent interactions
- Add session filtering based on date comparison with question_date validation
- Create rate limiting with start interval control between requests
- Implement sophisticated retry coordination using asyncio conditions
- Add comprehensive error tracking for failed and filtered session extracts
- Remove deprecated concurrency parameter from jinli_lme.yaml configuration
- Add structured output validation in session review step
- Include detailed metadata reporting with session statistics and errors

* fix(benchmark): adjust default concurrency for auto_memory job

- Changed default concurrency from 3 to 1 for auto_memory job to prevent API overload
- Updated help text to reflect new default value of 1 for concurrency parameter
- Modified documentation to clarify concurrency behavior varies by job type

* refactor(search): replace hardcoded candidate multiplier with constant

- Introduced _CANDIDATE_MULTIPLIER constant set to 10
- Replaced hardcoded factor of 5 with _CANDIDATE_MULTIPLIER in BM25 search
- Replaced hardcoded factor of 5 with _CANDIDATE_MULTIPLIER in vector search
- Updated test to verify both search steps use ten times limit for candidates
- Imported VectorSearchStep and Bm25SearchStep in test module
- Added comprehensive test case for candidate count calculation logic

* feat(lme): add data inspection error handling with fallback mechanism

- Implemented non-retryable data inspection error markers detection
- Added _is_data_inspection_error method to identify inspection failures
- Created fallback handling for data inspection errors in auto memory extraction
- Added fallback handling for data inspection errors in session review
- Extended failed extracts tracking with non-retryable and fallback flags
- Separated fallback extracts from regular failed extracts in reporting
- Enhanced error logging with specific data inspection failure messages
- Updated metrics to track fallback extractions and reviews separately
- Maintained existing retry logic for other exception types

* feat(benchmark): enhance session review statistics with fallback tracking

- Add support for identifying and listing non-retryable fallback reviews
- Introduce --list-fallback argument to display fallback review details
- Separate retryable failures from non-retryable fallbacks in reporting
- Track fallback samples and sessions separately from failed ones
- Update console output to show both retryable and non-retryable categories
- Include fallback details in JSON output with reasons and session info
- Modify failure counting logic to distinguish between retryable and fallback reviews

* feat(benchmark): add question_id tracking and enhanced fallback reporting

- Add question_id function to extract query.question_id from data
- Initialize question_id_by_id dictionary to store question IDs by index
- Store question_id for each sample during data processing
- Enhance fallback output to include question IDs and session information
- Format sample labels with question IDs when available
- Display session IDs associated with each fallback case

* feat(benchmark): add question_id support and improve bad sample reporting

- Add question_id_for function to extract question_id from multiple sources
- Add sample_label function to format samples as idx(question_id) when available
- Store question_id in data dictionary during processing
- Change bad_golden and bad_sessions to store full records instead of just indices
- Update list_bad output to show formatted labels with question_id information
- Improve error reporting with more detailed sample identification

* feat(benchmark): enhance golden check stats with structured output

- Add related_session_ids function to extract session IDs from verdict records
- Create grouped_records function to group records by question type
- Replace flat list output with JSON-formatted grouped records in list_bad option
- Replace flat list output with JSON-formatted grouped records in list_bad_sessions option
- Maintain Chinese labels while adding structured data presentation
- Improve readability of bad verdict record display with hierarchical grouping

* feat(benchmark): update data structure for question indexing

- Replace sample_label with _idx field for index tracking
- Add question_id field to store _question_id values
- Maintain backward compatibility with empty string defaults
- Preserve existing session_id functionality
- Update data mapping to include new fields in grouped results

* refactor(benchmark): streamline golden answer verification process

- Replace relevance filtering with comprehensive information extraction
- Remove is_relevant field and simplify session summary structure
- Change relevant_info to extracted_info for clarity
- Update golden check logic to work with full extractions instead of filtered summaries
- Simplify prompt instructions to focus on complete information extraction
- Remove redundant schema validation and structured output requirements
- Adjust statistics calculation to match new extraction approach
- Update metadata field names to reflect extraction rather than relevance checking

* feat(benchmark): add selective file deletion option to clean_sample_outputs

- Add --filename argument to delete only specific root-level files
- Modify iter_sample_targets function to accept optional filenames filter
- Implement validation for root-level filename constraints
- Update function calls to pass filenames parameter
- Add example usage for selective file deletion in documentation

* feat(benchmark): add error count metrics to golden check statistics

- Added golden_bad, session_bad, and both_bad calculation fields
- Updated console output format to include error counts per question type
- Modified table display to show both accuracy rates and error numbers
- Enhanced statistical summary with additional error breakdown metrics

* test(search): update search step tests with include_source parameter

- Added include_source=False parameter to VectorSearchStep initialization
- Added include_source=False parameter to Bm25SearchStep initialization
- Maintained existing RuntimeContext parameters for both search steps
- Updated test calls to match new constructor signature with include_source option
2026-07-13 21:26:27 +08:00
jinliyl
2612d25959
feat(lme): add cli execution and agentic search tooling (#334)
* feat(service): add CLI service for local job execution

- Introduce CliService to execute single jobs locally without serving ports
- Add prepare_start_config and should_precheck_start functions for CLI job setup
- Update reme start command to use CLI service when job argument is provided
- Change default service backend from http to cli in jinli_lme config
- Modify SearchStep to use constants and rename configuration parameters
- Add unit tests for CLI service functionality and configuration handling
- Update file extension support to include json format in addition to md and jsonl

* feat(search): add BM25 and vector search steps with configuration updates

- Add Bm25SearchStep and VectorSearchStep classes with tool context deduplication
- Register new search step components in index module
- Update configuration to use separate vector_search and bm25_search endpoints
- Modify LLM models from qwen3.7-plus/glm-5.1 to glm-5.2 variants
- Adjust search parameters and remove hybrid search implementation
- Configure embedding store as default in storage settings
- Remove auto-memory and file catalog configurations
- Update watch directories from multiple paths to session_dir only

* feat(agent): add tool result offloading and workspace management

- Add tool_results_dir configuration option for offloaded tool results storage
- Implement ToolResultOffloadMiddleware to persist large tool results to files
- Create WorkspaceBackend to standardize file operations across tools
- Add configurable builtin tools selection with sequential execution option
- Integrate middleware support for agent wrapper with offloading capability
- Update application initialization to create tool results directory
- Add safety mechanisms for filesystem operations with sanitized filenames
- Enhance agent wrapper with configurable working directory handling
- Upgrade agentscope dependency to version 2.0.4 for improved features

# Conflicts:
#	reme/application.py

* feat(benchmark): add LongMemEval agentic search and result management

- Introduce AgenticAnswerStep for agent-based history search
- Add LmePrepareJudgeStep and LmeSaveResultStep for evaluation pipeline
- Implement AddDraftStep and ReadAllDraftStep for evidence accumulation
- Update configuration with new agent wrapper and search parameters
- Add comparison script for analyzing agent run differences
- Include documentation for LongMemEval failure analysis
- Enhance tool result offloading with skip options
- Modify search defaults and indexing behavior

* feat(agent): implement tool result offloading with system reminders

- Added tool_result_offload_message parameter to agent wrapper reply method
- Implemented configurable reminder template for offloaded tool results
- Created system reminder messages when tool results are offloaded to files
- Added Chinese user message template for agentic answer step
- Updated tool result offloading middleware to use custom reminder templates
- Enhanced agentic answer instructions to handle long tool results via draft storage

* feat(scripts): add LongMemEval results summarization tool

- Create summarize_lme_results.py script to analyze result JSON files
- Implement command line interface with answer id and dataset root options
- Add support for specifying index range with start and end parameters
- Include option to show failure details and non-successful completions
- Calculate completion statistics and accuracy metrics
- Display detailed breakdown of yes/no/other judgements
- Handle missing and unreadable result files gracefully
- Format output with percentages and comprehensive summary statistics

* feat(summarize_lme_results): add question type breakdown to result summary

- Import defaultdict from collections module
- Add by_type dictionary to track statistics by question type
- Count completed, yes, no, and other responses for each question type
- Display detailed breakdown table showing accuracy by question type
- Include question type column when processing judgements
- Print comprehensive summary with question type distribution
- Calculate and display accuracy percentage for each question type category

* feat(lme): switch to qwen3.7-max model and add shuffle functionality

- Changed default LLM model from glm-5.1 to qwen3.7-max in jinli_lme.yaml
- Added random module import for shuffle functionality
- Implemented --shuffle argument with BooleanOptionalAction for dataset shuffling
- Added --seed argument to control random seed for reproducible shuffling
- Applied random shuffle to dataset indices when shuffle is enabled
- Added console output showing shuffle operation and seed information

* fix(cli): set default random seed for shuffle functionality

- Changed default seed value from None to 42 for consistent shuffling behavior
- Ensures reproducible results when using shuffle option without explicit seed
- Maintains backward compatibility while providing deterministic defaults

* refactor(benchmark): update agentic answer guidelines for grounding

- Updated English instruction to emphasize strict grounding in retrieved context
- Modified Chinese instruction to stress evidence-based responses without inference
- Removed redundant conciseness requirement in both language versions
- Enhanced clarity on proper use of draft saving and retrieval mechanisms
- Strengthened emphasis against hallucination of unsupported facts

* refactor(benchmark): update agentic search instructions and configuration

- Replace separate vector_search and bm25_search with unified search tool
- Update agent instructions to use single search tool with multiple strategies
- Simplify Chinese instructions for search methodology
- Add comprehensive search tool configuration with hybrid vector/BM25 capabilities
- Increase model retry attempts from 1 to 3 for better reliability
- Remove redundant tool references from job_tools list

* feat(search): add configurable search limit with environment variable support

- Remove hardcoded limit and min_score parameters from config schema
- Increase LLM context size from 200000 to 1000000
- Add REME_SEARCH_LIMIT environment variable support for search configuration
- Implement command line argument --search-limit to override default search limit
- Add input validation to ensure search limit is positive
- Modify subprocess execution to pass environment variables
- Update search step to use dynamic default limit from environment or fallback to 5

* refactor(benchmark): remove agentic answer step and related configurations

- Removed AgenticAnswerStep class and its registration
- Deleted agentic_answer.yaml prompt configuration file
- Removed agentic answer related job definitions from jinli_lme.yaml
- Cleaned up tool result offloading middleware implementation
- Removed tool_results_dir configuration field from application config
- Deleted comparison and analysis scripts for agent runs
- Removed agentic answer step from LME init module exports
- Updated agent wrapper to remove tool result offloading functionality
- Removed unused imports and dependencies in agent wrapper module

* refactor(benchmark): remove unused LME result processing components

- Removed LmePrepareJudgeStep and LmeSaveResultStep classes from benchmark module
- Cleaned up imports and exports in lme module initialization
- Removed unused middleware configuration from agent wrapper
- Deleted obsolete result.py file containing deprecated result processing logic
- Simplified agent instantiation by removing middleware parameter
- Updated import statements to reflect removed dependencies

* refactor(index): remove unused search steps and update imports

- Remove Bm25SearchStep and VectorSearchStep from index steps module
- Remove unused prepare_start_config and should_precheck_start exports
- Move import statements to proper location in reme.py
- Update test module to use direct import path for CliService
- Remove vector_search and bm25_search configurations from jinli_lme.yaml
- Add workspace directory environment variable configuration
- Add docstring to getcwd method in agent wrapper
- Remove empty middleware list from agent wrapper initialization

* feat(index): add BM25 and vector search steps with tool context deduplication

- Add Bm25SearchStep for plain BM25 keyword search with tool_context deduplication
- Add VectorSearchStep for plain vector search with tool_context deduplication
- Implement tool context state management with TTL-based deduplication
- Add support for chunk deduplication across tool contexts within TTL window
- Update index steps module to include new search step classes
- Add test coverage for CLI metadata output functionality
- Refactor CLI service to remove unused show_status parameter
- Update documentation comments to reflect internal service configuration

* feat(steps): add Python code execution capability

- Introduce PythonExecuteStep to run Python code in subprocess
- Add configuration for python_execute step in jinli_lme.yaml
- Register python_execute in available tools list
- Implement timeout handling with default 60 second limit
- Capture stdout/stderr output and return code metadata
- Add comprehensive unit tests for execution scenarios
- Support workspace directory context for code execution
- Handle timeout errors and runtime exceptions gracefully

* refactor(python_execute): replace subprocess with asyncio for Python code execution

- Replace subprocess.run with asyncio.create_subprocess_exec for non-blocking execution
- Add _PythonResult dataclass to encapsulate execution results and timeout status
- Implement proper timeout handling with asyncio.wait_for and process.kill()
- Update metadata to include returncode and stderr when timeout occurs
- Convert synchronous _run_python method to asynchronous implementation
- Maintain backward compatibility while improving execution reliability

* refactor(python_execute): replace subprocess with asyncio for Python code execution

- Replace subprocess.run with asyncio.create_subprocess_exec for non-blocking execution
- Add _PythonResult dataclass to encapsulate execution results and timeout status
- Implement proper timeout handling with asyncio.wait_for and process.kill()
- Update metadata to include returncode and stderr when timeout occurs
- Convert synchronous _run_python method to asynchronous implementation
- Maintain backward compatibility while improving execution reliability
2026-07-08 17:43:09 +09:00
jinliyl
206a53e5ed
init: reme version 0.4.0 (#284) 2026-06-22 15:41:19 +08:00
Renamed from reme4/steps/index/__init__.py (Browse further)