50 commits

Author	SHA1	Message	Date
jinliyl	99afc2604f	fix(release): harden embedding store and plugins for ReMe 0.4.1.9 (#503) ... * chore(release): prepare ReMe 0.4.1.9 * refactor(config): remove daily_cookbook and streamline plugin configs - Delete the entire daily_cookbook.yaml standalone application config - Remove qwenpaw dependencies verification and related CI workflow steps - Simplify release workflows by removing qwenpaw verification and enforcing reme-ai >=0.4.1.9 - Update plugin start commands and examples to use 'default' or 'demo' configs instead of daily_cookbook - Adjust imports and tests related to daily_cookbook removal and injected_job_kwargs enhancements - Refactor agent wrapper to support injected_job_kwargs for job parameter injection in auto-fin and daily-paper - Improve daily_paper digest prompt to include configured daily directory and correct historical search constraints - Update dependency versions in pyproject.toml files to require reme-ai >=0.4.1.9 and remove qwenpaw optional dependencies - Clean up unused environment variables and obsolete test cases related to daily_cookbook and verification steps * fix(local_embedding_store): retry batch computation on vector space changes - Add up to 3 attempts to recompute embedding batch if vector space changes during processing - Log warnings when maximum retries reached and discard stale results - Prevent caching results from outdated vector spaces to maintain consistency - Add tests to verify retry behavior and abort after continuous vector space churn fix(daily_paper): update digest search logic and tests - Change search to query existing memory, not only previous articles in daily_dir - Allow multiple searches outside daily_dir but limit links to dated markdown in daily_dir before today - Update test assertions to reflect revised search and linking rules * fix(embedding): retry vector space changes per request	2026-08-28 11:35:04 +08:00
jinliyl	3d2ecc60d2	feat(service): expose MCP through HTTP backend (#498) ... * feat(service): expose MCP through HTTP backend Serve JSON/SSE job endpoints and streamable HTTP MCP from one FastAPI application, sharing the same jobs and application lifecycle. Preserve the standalone MCP backend, add configurable MCP HTTP settings, update startup metadata and integration docs, and cover routing, lifecycle, configuration, and compatibility behavior with unit tests. * fix(service): preserve MCP request protections Route the exact MCP path through the complete FastMCP ASGI application so its middleware and state remain active. Reject non-literal MCP paths and validate reserved Job conflicts before tolerant service registration. Add regression coverage for middleware preservation, route syntax, and startup failure. * fix(service): reject encoded MCP paths Reject percent signs in mcp_path so ASGI path decoding cannot turn an accepted configuration into an unreachable route. Cover encoded slash, space, and double-encoded slash inputs.	2026-08-27 17:23:11 +08:00
jinliyl	1a6b584274	fix(persistence): avoid duplicate index dumps (#489) ... * fix(persistence): avoid duplicate index dumps * fix(persistence): align dumps with component ownership * fix(persistence): preserve subclass dump hooks	2026-08-26 16:51:00 +08:00
jinliyl	15d12be6b6	fix(index): tolerate invalid text encoding (#490) ... * fix(index): tolerate invalid text encoding * fix(index): preserve text chunker compatibility	2026-08-26 16:16:26 +08:00
jinliyl	c8e1248769	fix: recover embeddings after transient health check failure (#471) ... * fix: recover embedding after transient health failure * refactor(embedding_store): remove provider_success_count and simplify health recovery logic - Deleted provider_success_count attribute and related methods across embedding and file stores - Updated _recover_after_real_request to rely solely on is_healthy flag for recovery decisions - Removed redundant counting logic for provider successes during embedding operations - Cleaned up health status management to streamline provider recovery detection - Adjusted unit tests to align with removal of provider_success_count and maintain health checks consistency * refactor(embedding_store): use default health check timeout * fix(embedding_store): ensure is_healthy remains unchanged on cache hits - Updated get_embeddings docstring to clarify cache hits must not alter is_healthy state - Improved code comment for embedding dimension matching method * fix(file_store): make embedding recovery race-safe * ci: use default CodeQL query suite * fix(file_store): preserve queued embedding rebuilds * fix(file_store): preserve verified recovery without chunks	2026-08-21 13:58:51 +08:00
jinliyl	f44f52d919	fix(embedding): exclude provider init from health timeout (#484)	2026-08-21 11:23:14 +08:00
jinliyl	618e8cec66	feat: add entry-point plugin system and extract Auto Fin (#459) ... * feat: add entry-point plugin system * fix: harden plugin config and client loading * docs(workflow): add detailed manual for publishing reme-auto-fin to PyPI - Provide step-by-step instructions for updating project.version and merging branches - Explain dependency verification for reme-ai on PyPI during build - Specify requirements for GitHub Actions secret configuration and version uniqueness - Describe manual workflow triggering and input of version number - Recommend publishing order for related projects - Clarify that only manual dispatch triggers publishing, no automatic triggers on push or tag * feat: support plugin-defined component types * refactor: simplify plugin configuration * fix: isolate plugin loading and defer client fallback * refactor: freeze built-in component registry * fix: isolate config entry point loading * fix: complete auto-fin package metadata	2026-08-19 17:23:23 +08:00
jinliyl	215c1f72f2	feat: refine local-first research and memory workflows (#444) ... * feat: refine local-first research workflows * fix: delegate structured output tool choice * refactor(auto-fin): fetch and filter rolling CLS news * fix(auto-fin): keep imports portable across platforms * feat(auto-fin): expose CLS fetch controls * fix(auto-fin): propagate configurable news window * feat(auto_fin): normalize hybrid wikilinks in report body - Add _normalize_hybrid_wikilinks method to remove redundant Markdown destinations - Use regex to identify hybrid wikilinks with optional destinations - Replace redundant destinations with simpler wikilink format for clarity - Ensure normalization is failure-safe with exception handling and logging - Update report body normalization process to apply hybrid wikilink fix - Add unit tests to verify correct normalization and failure safety behavior * fix(dream): serialize integration with application-wide asyncio lock - Add application-wide asyncio.Lock to serialize digest writes during integration - Update _snapshot_digest to capture metadata per bucket - Validate bucket association when recovering from file changes - Add tests ensuring recovery only from the correct bucket - Add tests confirming integration lock is shared across application context - Enhance strict topic YAML loading validation in dream utils - Add tests for strict topic loading rejecting invalid or lossy fields * fix(cookbook): enable configurable job_tools for digest and merge steps - Update daily_cookbook.yaml to add job_tools: [memory_search, read] in digest steps - Modify DailyPaperDigestStep to read job_tools from kwargs instead of fixed list - Modify AutoFinMergeStep to similarly read job_tools from kwargs - Update tests to pass job_tools explicitly when invoking these steps - Remove hardcoded _TOOLS constants and replace with dynamic job_tools handling * fix: retry incomplete dream receipts * perf(pdf): increase max PDF pages limit from 20 to 35 - Updated configuration max_pdf_pages from 20 to 35 in daily_cookbook.yaml - Modified code to extract up to 35 pages instead of 20 in analyze.py - Updated README and README_ZH to document the increased max_pdf_pages - Adjusted unit test assertions to reflect new max_pdf_pages limit of 35 * fix memory integration and daily paper links * docs clarify cookbook tool usage	2026-08-11 23:32:34 +08:00
jinliyl	9533c17d51	feat(web): serve workspace from HTTP service (#446) ... * feat(web): add the ReMe workspace frontend * feat(web): serve workspace from HTTP service * test(web): satisfy pylint docstring checks * fix(web): use same-origin API safely * fix(web): preserve API route semantics	2026-08-11 23:32:24 +08:00
jinliyl	21057931a9	fix(embedding): isolate caches by vector space (#442) ... * fix(embedding): isolate caches by vector space * fix(embedding): stabilize cache space switching * Revert "fix(embedding): stabilize cache space switching" This reverts commit 74193c9a0a. * fix(embedding): include resolved OpenAI endpoint in cache ID * fix(embedding): stabilize cache space switching * fix(embedding): isolate Ollama endpoint caches	2026-08-10 22:42:16 +08:00
jinliyl	e05b201da9	feat(backend): improve workspace support for web clients (#420) ... * feat(backend): improve workspace support for web clients * fix(config): preserve the default workspace directory * chore(reme): bump version to 0.4.1.5 - Update __version__ from 0.4.1.4 to 0.4.1.5 in initialization file * fix(chat): disable builtin tools in read-only mode * fix(agent): make builtin tools opt-in * fix(list): tolerate files removed during mtime sort * fix(chat): expose complete read-only job set	2026-08-07 23:52:56 +08:00
Ziyang Guo	6503e1271c	fix(prompt): default omitted conditional flags to false (#424) ... Always apply conditional-line filtering so tagged prompt lines are removed unless the corresponding boolean flag is explicitly true. Add regressions for omitted flags with and without format variables. Test: pytest tests/unit/test_prompt_handler.py -q	2026-08-06 16:22:59 +08:00
jinliyl	f31daf1949	Revert "feat(backend): improve workspace support for web clients (#417)" (#419) ... This reverts commit b00eb0a9ea.	2026-08-05 23:17:08 +08:00
jinliyl	b00eb0a9ea	feat(backend): improve workspace support for web clients (#417)	2026-08-05 23:07:05 +08:00
lichen2015	ad4f23e4dc	feat(file_store): add ZvecLocalFileStore backend (#410) ... * feat(file_store): add ZvecLocalFileStore backend - Implement ZvecLocalFileStore with native zvec collection for ANN search. - Keep JSONL chunks as the source of truth; rebuild collection from chunks when sidecar digest/dimension/HNSW M mismatch is detected. - Add dedicated unit tests in tests/unit/test_zvec_file_store.py. - Parametrize existing file_store consistency tests to cover both LocalFileStore and ZvecLocalFileStore. - Register the new backend in reme/components/file_store/__init__.py. * fix(file_store): fix zvec collection sync and content validation, declare zvec dependency	2026-08-05 22:08:30 +08:00
jinliyl	e256c556ca	feat: add workspace web APIs and star growth report (#416)	2026-08-05 18:03:37 +08:00
jinliyl	a9ec334adc	feat: simplify wikilink semantics and support line anchors (#412) ... * feat: simplify local links and support line anchors * fix: align line anchor tests with CI lint * fix: preserve local links across file moves * fix: encode markdown paths when rewriting links * refactor(read): keep explicit line range parameters * fix: simplify legacy link predicate compatibility * docs: align local link behavior with implementation * fix: skip unsupported markdown destination escapes * fix: normalize workspace link paths across platforms * fix: bound markdown link scanning * fix: keep local link processing linear * docs: clarify permissive markdown link parsing * fix: handle local link processing failures * refactor: limit file links to wikilink syntax * docs: align wikilink contract with implementation * fix: normalize dream and neighbor paths on Windows * fix: resolve workspace path for neighbor expansion	2026-08-05 11:47:50 +08:00
xyf2020	6b035c6553	feat(evaluation): track job calls and agent token usage in benchmarks (#406) ... * feat(counter): extend counter tree utils and record job call statistics - replace global_counter_next with fetch-and-add style global_counter_add/inc, plus read-only global_counter_get and global_counter_get_all - record per-job call counts in app_context.metadata via BaseJob._record_call, covering background/cron/stream jobs - update agentic_answer step and utils exports; add unit tests for job counting and counter utils * feat(evaluation): add check_job_count interface and report search calls in benchmarks - Extract _counter_key from BaseJob._record_call for reusable counter lookup - Add reme.utils.evaluation_interface.check_job_count read-only helper - Track and report average search calls per query in beam and longmemeval benchmarks * job counter * token消耗量统计 * benchmark输出完整token消耗统计 * benchmark统计输出改用标准差 - beam/longmemeval 的工具调用与 token 统计由方差改为标准差输出 - 修复 lint: 局部变量遮蔽 importlib.metadata、补充测试 docstring - black 格式化 * fix(evaluation): preserve complete token usage metrics * fix: exclude stream replies from token accounting * Revert "fix: exclude stream replies from token accounting" This reverts commit 85bf32064d. * Reapply "fix: exclude stream replies from token accounting" This reverts commit 6722c24dc5. * support agent scope 2.0.5 * feat: support injection_config to disable runtime state injection in benchmarks - Add InjectionConfig passthrough in AsAgentWrapper.reply() - Disable inject_runtime_state in BaseAgenticAnswerStep to avoid wall-clock time conflicting with benchmark query_time anchors - Disable inject_runtime_state in beam/lme llm_judge calls * feat: agentscope dual-version compat & benchmark improvements - Add version_tuple utility for semantic version comparison - AsAgentWrapper: version-aware InjectionConfig, max_iters doubling, and token usage collection (reply vs reply_stream) for AS>=2.0.5/<2.0.5 - Default inject_runtime_state=False in wrapper to avoid benchmark time-anchor conflicts; remove per-callsite injection_config overrides - longmemeval run.py: support question_ids filter in dataset config - Fix unused import in test_evaluation_interface; format fixes * chore: remove temporary flip-test benchmark config * revert: pin agentscope to 2.0.4.post1 and drop dual-version compat * fix(evaluation): clarify usage semantics and atomic counters --------- Co-authored-by: sa-buc <jiangniurou.xyf@dail-algo011164204033.ET135> Co-authored-by: jinli.yl <jinli.yl@alibaba-inc.com>	2026-08-04 11:42:18 +08:00
Sen Huang	550317c3bf	Revert "feat(plugin): add ReMe integration for Codex (#372)" (#400) ... This reverts commit a367c2ce13.	2026-07-29 18:14:05 +08:00
DiegoCluv7	a367c2ce13	feat(plugin): add ReMe integration for Codex (#372) ... * feat(plugin): add ReMe integration for Codex * fix(plugin): fix Codex plugin port, transcript ingestion, and Windows support * fix(plugin): correct Codex transcript schema, path validation, and hook fixes * test(plugin): add MCP round-trip tests * fix(plugin): rewrite parser and tests. * fix(plugin): reserve id-less messages, cover marketplace manifest, error handling, path fixes, and main sync Co-Authored-By: Claude <noreply@anthropic.com> --------- Co-authored-by: Claude <noreply@anthropic.com>	2026-07-29 18:11:29 +08:00
xyf2020	4eb2adf961	feat(faiss_file_store): upgrade FAISS to HNSW index with async reindex (#390) ... * feat(file_store): upgrade FAISS to HNSW index with async reindex and path constraint - Replace IndexFlatIP with IndexHNSWFlat for better recall/speed tradeoff - Add dynamic efSearch (limit * 5) scaled to query request size - Add async_reindex option: background rebuild with generation-based invalidation - Extract _delete_nodes() in LocalFileStore for subclass reuse - Add unit tests for file store consistency * fix: resolve pylint warnings in faiss store and test file * refactor(file_store): replace generation-based reindex with event-flag worker - Replace _reindex_generation/lock/task with a single long-lived worker coroutine consuming an asyncio.Event flag; repeated submissions coalesce - Use local index reference in vector_search to avoid TOCTOU on self._faiss_index - Pass index explicitly to _set_ef_search for consistency - Track _index_writes to re-arm reindex after concurrent writes - Update tests to match new internal API * fix: resolve pylint too-many-return-statements and implicit-booleaness warnings * feat(file_store): add refine maintenance hook and incremental embedding backfill - Add refine() idle-time maintenance hook to BaseFileStore/LocalFileStore - FaissLocalFileStore: incremental vector add on backfill instead of full rebuild - Dynamic tombstone compaction threshold scaled by index size - Add RefineStoreStep with daily cron job (refine_store_cron) - Enable faiss backend and embedding_store by default in default.yaml - Add unit tests for faiss index maintenance * chore(deps): promote faiss-cpu to core dependencies faiss backend is now the default file_store, so faiss-cpu moves from the optional [core] extra to the base dependencies list. * feat: rename refine_store to optimize_index and add vecdb_path_constraint - Rename refine_store step to optimize_index with cron job scheduling - Add vecdb_path_constraint to file_store components - Update default.yaml with optimize_index_cron and faiss backend comment - Update memory_search docs (en/zh) for FAISS vector management - Update unit tests for index maintenance * feat(faiss): add embedding digest to reject stale sidecar after partial dump Add _chunks_embedding_digest() that computes an order-independent SHA-256 over (chunk_id, float16 embedding) pairs. The digest is written into the idmap sidecar at dump time and verified at load time. A mismatch means the sidecar vectors belong to a different chunk generation than the authoritative JSONL — detectable even when the live-ID set is unchanged (same-ID in-place update crash window). Add test_faiss_rejects_stale_sidecar_after_partial_dump reproducing the crash-between-writes scenario and asserting digest-based rejection. Compress verbose docstrings/comments in existing tests for pylint line budget. --------- Co-authored-by: sa-buc <jiangniurou.xyf@dail-algo011164204033.ET135>	2026-07-27 19:54:38 +08:00
xyf2020	f34dcdb09b	feat(Step tools): add white/black path prefix permission filtering to read, edit, write (#391) ... * feat(read): add white/black path prefix permission filtering to ReadStep * feat: add PrefixCheck mixin for path-prefix permission in file I/O steps * feat: add injected_job_kwargs mechanism and refine path-prefix permission * refactor(file_io): consolidate prefix_check into _path module	2026-07-27 17:20:21 +08:00
jinliyl	1687179f84	feat: add Auto Fin cookbook and managed outbound proxy support (#392) ... * feat: add ssh proxy * feat: add ssh proxy * feat: add ssh proxy * feat: add ssh proxy * feat: add prompt * feat: add agent wrapper * feat: add agent wrapper * feat: add agent wrapper * feat: add tushare skill * feat: add tushare skill * feat: add tushare skill * feat: add none stream * chore(deps): update dependency versions in pyproject.toml - Bump claude-agent-sdk from 0.2.123 to 0.2.126 - Upgrade pre-commit to version 4.6.1 or higher - Upgrade pytest to version 9.1.1 or higher * feat(agent_wrapper): add session compaction support and unify session commands - Introduce compact_session method to BaseAgentWrapper and implement it in AsAgentWrapper, CcAgentWrapper, and CodexAgentWrapper - Add session_command module with SessionCommandResult dataclass and handle_session_command function for /clear and /compact commands - Update __init__.py exports to include session_command handlers - Modify DingTalkWaitStep to handle session commands via handle_session_command function - Remove streaming mode from DingTalkWaitStep and simplify reply handling to final Markdown replies only - Add unit tests for session compaction methods and session command handling across wrappers and DingTalk integration - Clean up and remove obsolete streaming and card rendering code from DingTalk wait step - Adjust daily_cookbook.yaml to remove stream and card_update_interval config entries for DingTalk wait step * feat(auto_fin): add Auto Fin simulated portfolio cookbook workflow - Add comprehensive Auto Fin schema exports for multiple models and enums - Implement base class and helpers for Auto Fin analysis steps - Create file, state, and formatting utilities for Auto Fin with atomic file writes and locking - Define Auto Fin pipeline with four analysis agents: backtest, event, portfolio, and US correlation - Register Auto Fin package in cookbook workflows and schema initialization - Add detailed documentation in markdown describing the system design, workflow, and data contracts * feat(outbound_proxy): add application-scoped outbound HTTP proxy components - Introduce BaseOutboundProxy and OutboundProxyEndpoint as core contracts - Implement FixedHttpOutboundProxy for external HTTP proxy integration - Add SshHttpOutboundProxy providing SSH-backed local HTTP proxy tunnels - Register outbound proxy components in component registry and enumeration - Update components package to include outbound_proxy module - Add dependency on pproxy for SSH HTTP proxy bridging - Include comprehensive unit tests covering proxy lifecycle, validation, environment merging, error handling, readiness, and monitoring mechanisms * refactor(network): replace SSH proxy with explicit HTTP outbound proxy - Remove SSH proxy helper implementation and references in codebase - Add support for explicit HTTP proxy URL in arXiv and HuggingFace clients - Modify clients to use async context manager for consistent resource handling - Update daily paper steps to forward outbound proxy configuration explicitly - Change tests to cover new proxy usage model and remove SSH proxy mocks - Add outbound proxy component configuration in daily_cookbook.yaml - Ensure proxy URL usage disables environment trust in HTTP clients - Fix app context component enum access to be defensive against missing keys * feat(agent_wrapper): add managed proxy support for command environments - Introduce BaseOutboundProxy binding in BaseAgentWrapper for outbound proxy management - Add bash_environment and command_proxy_environment properties to apply proxy settings - Update WorkspaceBackend instantiation in AsAgentWrapper to use bash_environment - Inject managed proxy export commands into Claude Code Bash commands via hooks - Enhance CodexAgentWrapper to include managed proxy in shell environment policy - Modify daily_cookbook.yaml steps to specify outbound_proxy as default where needed - Add comprehensive unit tests verifying managed proxy injection and environment isolation - Ensure subprocess_environment remains unchanged while proxy is applied selectively to commands * refactor(memory): replace search job_tools with memory in daily cookbook config - Change workspace_dir default from .reme to reme_workspace - Replace search job_tools with memory across multiple components and jobs - Update descriptions to reflect long-term memory retrieval instead of search - Modify system prompts to instruct using memory for retrieving notes - Adjust unit tests to verify memory job_tools and job presence instead of search - Ensure consistency in configuration and tests for memory backend usage * refactor(config): rename memory to memory_search in daily cookbook config - Change all occurrences of "memory" to "memory_search" in job_tools and job definitions - Update related system prompts to reflect the new memory_search terminology - Modify unit tests to assert the presence of memory_search instead of memory - Ensure consistency across skills, job tools, and backend configurations in multiple components * feat(auto_fin): add deterministic quantitative research and ranking fusion - Introduce new schema models: EtfScore, RankingMetrics, ExtremeAnalysis, DimensionRanking, and FusionRanking to represent deterministic research outputs - Add ranking data to event, backtest, us_correlation, and portfolio analysis outputs - Implement ranking_section renderer to format Top20 scores and diagnostics in Markdown - Develop AutoFinQuantStep for deterministic ETF ranking using TuShare data, Polars, and a custom extremely randomized tree ensemble - Integrate quantitative rankings into backtest and portfolio analysis steps and reports - Extend auto_fin pipeline with new quant_enabled and quant_required config options - Enforce ranking constraints like unique codes, contiguous ranks, and normalized fusion weights - Update analysis YAMLs with rules limiting data freshness, universe, and ranking usage - Incorporate ranking outputs into all major markdown report bodies in Auto Fin pipeline - Add concurrency-limited asynchronous TuShare client to fetch required market data - Introduce cross-sectional rank correlation and NDCG metrics for ranking quality evaluation * feat(auto_fin): implement stage-wise notification and reporting for analysis pipeline - Refactor notification config in daily_cookbook.yaml to support dispatch steps - Update AutoFinNotificationStep to deduplicate notifications per run stage - Add _notify_stage method in pipeline to send notifications for each analysis stage - Implement persistence and notification for event, backtest, US correlation, and portfolio stages - Modify pipeline flow to persist reports and notify after each stage completion - Adjust metadata to track notifications and errors per stage - Update tests to verify stage-wise notification sending and deduplication - Remove older combined report persistence in favor of modular stage handling * feat(auto_fin): add outbound proxy support for Tushare API usage - Introduce BaseOutboundProxy reference in AutoFinPipelineStep and AutoFinQuantStep - Update TushareResearchClient and trade calendar fetch to accept and use proxy URL - Create _ProxiedTushareApi adapter to route Tushare requests via explicit HTTP proxy - Modify create_tushare_api utility to optionally return proxied API client - Add unit tests covering proxy forwarding and client behavior with managed proxies - Ensure proxy usage respects explicit proxy URL over environment fallback - Integrate outbound proxy into data fetching and quantitative research steps * feat(auto_fin): enforce checkpoint time validation and add state models - Introduce AnalysisState base class and specific states for event, backtest, and US correlation analyses - Replace analysis output types with corresponding state classes in run schemas - Add require_checkpoint_reached method to validate decision_at/data_cutoff against current time - Enforce checkpoint time checks before analysis steps in event, backtest, portfolio, and quant analyses - Refactor quant data loading to include adjustment factors and apply price adjustments without fallback - Update analysis YAML docs to require real-time checkpoint validation and forbid using future data - Improve portfolio run serialization by excluding redundant legacy fields and nested proposed actions - Add helper to extract readable sections from persisted checkpoint documents - Fix event analysis output validation to reject events and sources with future timestamps * feat(auto_fin): auto-select latest reached checkpoint if none specified - Extend checkpoint config to accept empty string for auto selection - Add static method to compute latest checkpoint reached by current time - Modify pipeline step to auto-select checkpoint based on trade calendar and time - Adjust force flag default depending on whether checkpoint is explicit or auto - Log details when checkpoint is auto-selected to improve observability - Add comprehensive tests for auto checkpoint selection logic and edge cases - Remove deprecated default and required constraints from force parameter in config * refactor(auto_fin): unify datetime comparison with compare_datetimes utility - Replace direct datetime comparisons with compare_datetimes function calls - Use cmp_to_key with compare_datetimes for sorting datetime tuples and lists - Update validation logic in backtest, event, analysis, and ledger modules for consistent datetime handling - Add unit tests to verify handling of naive and aware datetime comparisons in event and backtest validations - Ensure marked_at and interval_end timestamps are set and compared consistently using compare_datetimes - Improve correctness of ordering and conditional checks related to timestamps throughout auto_fin steps and ledger code * feat(auto_fin): add datetime comparison helper for mixed timezone data - Implement compare_datetimes function to handle naive and aware datetimes - Ensure naive datetime is interpreted in the known timezone of the counterpart - Facilitate comparisons between legacy and timezone-aware Auto Fin data - Add module docstring explaining purpose of the helpers * docs(auto_fin): enforce unique ETF representative per sub-theme in analysis rules - Update backtest.yaml to recommend or highlight only one ETF per sub-theme for ETF analyses - Modify event.yaml to map only one representative ETF per sub-theme, avoiding duplicate recommendations - Revise portfolio.yaml to restrict holdings/buys to a single ETF per sub-theme, preventing repeated buys of highly overlapping ETFs - Adjust us_correlation.yaml to retain only one representative A-share ETF per sub-theme for mapping or recommendation - Add test to verify presence of new sub-theme uniqueness guidance in step prompts * feat(auto_fin): separate draft model and include deterministic fusion ranking - Introduce _PortfolioProposalDraft pydantic model for agent-authored fields before ranking - Discard any "fusion_ranking" data from draft to prevent conflicts with canonical ranking - Modify AutoFinPortfolioStep to receive draft, enrich with fusion_ranking, and produce final output - Update tests to use _PortfolioProposalDraft and validate deterministic fusion ranking propagation - Add async test verifying fusion ranking is correctly set in portfolio output with no errors * refactor(auto_fin): rewrite and simplify Auto Fin schema and steps - Remove legacy Auto Fin analysis step modules and helpers - Replace complex ranking and portfolio models with simplified current-news models - Update schema to focus on news-case workflow with new domain models - Remove A-share decision checkpoints and backtest details from schema - Simplify recommendation and decision output structures - Clean up deprecated state and utility functions - Update Auto Fin steps initialization to new pipeline steps only - Improve uniqueness validation for themes and ETFs in research plan * feat(auto_fin): implement full local cache and analysis workflow for Auto Fin - Add AutoFinDataStep to prepare and cache daily TuShare data with lookback - Add AutoFinAnalysisStep to analyze cached data and generate Markdown report - Implement detailed time window, ETF filtering, and historical case validation - Introduce YAML prompts for planning and decision-making steps - Update .gitignore to include reme_workspace/ - Clean up config and import structure for auto_fin steps - Remove old pipeline.py and consolidate functionality into new modules - Use polars for efficient CSV reading and data processing - Ensure atomic writes and strict JSON serialization for cache files - Enforce rules on news timing, ETF universe, and historical case usage * fix(auto_fin): restrict news data source to '财联社' in analysis and cache - Update analysis templates to specify current news as from '财联社' only - Modify news fetching functions to filter by source '财联社' - Add validation method to check cached news source correctness - Update news caching logic to exclude non-'财联社' news - Enhance unit tests with multiple sources to ensure filtering works - Confirm news API calls include source filter parameter as '财联社' * refactor(auto_fin): convert I/O methods to asynchronous implementations - Change _news, _dataset, and _theme_data methods to async for improved concurrency - Move JSONL and CSV reading operations to asynchronous wrappers using asyncio.to_thread - Remove synchronous _read_jsonl and _read_csv functions, integrate them as static async class methods - Update cache validation methods to async, awaiting I/O operations accordingly - Adjust usage of dataset and news retrieval in analysis step to await asynchronous methods - Add async unit test to validate JSONL reading with unicode line separators - Preserve existing functionality while enabling non-blocking file and data access * fix(nx_file_graph): defer networkx import and improve dependency handling - Move networkx import inside NxFileGraph constructor for lazy loading - Raise ImportError with original exception context if networkx is missing - Remove module-level fallback assignment of nx to None - Expand test to block loading of multiple optional core dependencies eagerly - Change exception type in test from ModuleNotFoundError to AssertionError - Update test comments to reflect broader optional dependency checks * feat(embedding_store): add quota retry delay mechanism for embedding requests - Introduce quota_retry_delay parameter to configure wait time before retry on quota exhaustion - Implement detection of insufficient quota errors in LocalEmbeddingStore without external SDK - Add retry logic with custom delay when quota is insufficient during embedding requests - Update configuration to set max_retries and quota_retry_delay defaults for embedding store - Add unit tests covering quota exhaustion retry behavior with delay and opt-in control - Ensure existing retry behavior remains unchanged if quota_retry_delay is not set * feat(auto_fin): add detailed logging to analysis and data fetching steps - Add _preview static method for bounded diagnostic output in analysis.py - Log prompt start, completion, errors, and validation details in _reply method - Add info logs for major processing steps in execute method of analysis.py - Add debug and info logs for cache validation, data fetching, and pagination in data.py - Log conditions for skipping reports and cache plans in data.py execute method - Log download summaries and cache writes for news and ETF data - Improve error logging with exception details in cache validation functions - Ensure all logs include context such as record counts, paths, and parameters * refactor(auto_fin): overhaul Auto Fin workflow and schema contracts - Replace old Auto Fin schema models with comprehensive new data classes - Remove legacy Auto Fin analysis step in favor of modular agent-based steps - Introduce AutoFinAgentStep for validating structured agent replies - Simplify data cleaning and JSONL writing utilities for news cache - Remove synchronous and asynchronous dataset methods from analysis step - Redefine Auto Fin analysis configuration for 360-day news retention and multi-step pipeline - Remove embedded analysis prompt templates and replace with agent-driven logic - Update __init__.py exports to match new step implementations and remove deprecated classes - Improve error handling and validation in agent step reply processing - Clean up redundant imports and unused code in analysis and data preparation modules * feat(auto_fin): add detailed logging for analysis and data processing steps - Add timing logs to measure agent prompt processing duration in analysis.py - Log news cache hits and news write paths with record counts in data.py - Include detailed info logs for news download start and completion in data.py - Add start, progress, and completion logs with topic and event counts in history.py - Log start and completion of merge step including path and ETF count in merge.py - Add start and done logs with window and news counts in topic.py * feat(auto_fin): enhance schema and steps with detailed ETF and event modeling - Replace and add multiple AutoFin schema classes to support detailed ETF selection, historical research, market analysis, forecast models, and report output with validation - Implement Shanghai timezone normalization and strict validation in schema models - Remove deprecated AutoFin analysis agent step and consolidate reply handling in base step - Introduce AutoFinStep base class with shared helpers for prompt handling, data fetching, logging, and JSONL file operations - Add AutoFinDataStep to manage daily news data complete with schedule validation, caching, and source validation logic - Update cookbook configuration to customize auto_fin step parameters and simplify outbound proxy settings - Refactor imports and clean unused code for better maintainability * feat(auto_fin): introduce detailed historical event resolution and market similarity analysis - Add AutoFinHistoricalEventReference and AutoFinHistoricalSimilarity models for refined event referencing and similarity judgment - Implement validation to ensure non-empty critical fields and uniqueness of historical news IDs - Develop method to resolve Agent-selected historical event references from workspace files with strict path and existence checks - Enrich historical events with market entry and future returns data after resolution - Redesign market step to calculate similarity-weighted ETF forecasts based on matched historical event similarities - Enforce validation on matched historical events for uniqueness and proper weight summation - Simplify merge step output to final Markdown report without YAML frontmatter and redundant fields - Update user instructions for history search, market, and merge steps to reflect new data structures and responsibilities - Adjust test suite to cover new schema and step behavior changes, including enhanced validation and JSON output formats * feat(auto_fin): add new cron jobs and output analysis jsonl - Add new cron jobs auto_fin_1145_cron and auto_fin_1800_cron with auto_fin_steps - Change auto_fin_0930_cron schedule to run Monday to Sunday - Extend merge step to write analysis data to auto_fin_analysis.jsonl - Update unit tests to verify new cron jobs and their steps configuration * fix(auto_fin): improve atomic file write and refresh daily index - Change temporary file naming to include UUID for uniqueness and hidden prefix - Replace atomic write method from using Path.replace to os.replace with safe unlink - Add import and use os.replace for safer file replace operation - Refresh daily index after writing auto finance markdown and JSONL files - Import and call refresh_day_index in merge step to update file index asynchronously * docs(cookbook): add optional SSH proxy configuration in README files - Introduce optional SSH proxy setup in auto-fin and daily_paper cookbooks - Provide instructions to enable outbound proxy via `daily_cookbook.yaml` and environment variables - Add `REME_PROXY_IP` and `REME_PROXY_ACCOUNT` environment variables descriptions in multiple README files - Update English and Chinese README and README_ZH documents with proxy details - Maintain consistent formatting of environment variable tables across documents * fix(file_io): include schema_version in hidden metadata keys - Added "schema_version" to _INDEX_HIDDEN_METADATA_KEYS in _daily_index.py - Updated _render_notes_block to always include additional keys regardless of schema_version fix(deps): move pproxy dependency to later in pyproject.toml - Removed pproxy from early dependencies list - Added pproxy back near the end of dependency list for better ordering fix(outbound_proxy): require pproxy package for ssh_http proxy - Added importlib.util check for pproxy package presence - Raise RuntimeError if pproxy is not installed when using SSH HTTP outbound proxy - Improved error message suggests installing reme-ai with 'core' extra * docs(readme): update News section with new Cookbook workflows - Clarify introduction of optional Cookbooks with Daily Paper and Auto Fin workflows - Update English README to reflect both paper discovery and file-native ETF event research - Revise Chinese README to include financial news and historical market data research capability - Maintain announcement of paper acceptance at Findings of ACL 2026 * feat(auto_fin): add calculation results to final Markdown output - Implement _calculation_results to summarize forecast for each ETF analyzed - Include program-calculated results in the JSON input for the Markdown report - Update YAML template to incorporate calculation results and adjust recommendation rules - Refine recommendation logic to rely on event impact judgments combined with calculation outputs - Modify tests to verify presence of calculation results and updated report content and format * up prompt * fix(keyword_index): ignore non-indexable chunks during keyword sync - Add is_indexable method to base and BM25 keyword index classes to check text tokenizability - Update local file store to exclude non-indexable chunks from expected document IDs to prevent rebuild - Fix JSONL chunker to correctly handle Unicode line separator U+2028 inside JSON strings without splitting - Add test to ensure non-empty but non-indexable chunk does not trigger keyword index rebuild - Add test to verify U+2028 character does not cause incorrect JSONL record splitting	2026-07-25 18:09:39 +08:00
jinliyl	46adb5ae1e	feat: add daily paper cookbook and DingTalk agent integration (#385) ... * feat(daily-paper): add daily paper cookbook workflow with schema and tests - Introduce daily paper schema types (DailyBriefOutput, PaperInfo, PaperNoteOutput, etc.) - Create daily paper cookbook module with analyze, collect, digest, rank, and select steps - Add cookbook entry point and integrate into main steps module - Replace job config export with daily brief output in schema exports - Add comprehensive unit tests covering pipeline, filtering, and output generation - Update dependencies including openai-codex and pypdf packages - Configure standalone daily paper cron job with proper scheduling and routing * test(daily_paper): update tests to use Claude Code wrapper exclusively - Add test to verify web search is disallowed by default in Claude Code - Update imports to include DailyBriefOutput, PaperNoteOutput, and PaperSelection schemas - Change test name from standalone_config_has_backend_split to reflect Claude Code only usage - Remove default agent wrapper and configure all steps to use Claude Code wrapper - Rename select_wrapper to cc_wrapper for clarity and consistency - Remove duplicate Claude Code wrapper initialization - Update test assertions to verify output schema usage matches expected sequence - Remove unused as_llm component from standalone configuration test * refactor(agent-wrapper): simplify skill resolution logic across all wrappers - Replace duplicate skill resolution code with centralized _resolve_project_skills method - Add project_path property with configurable relative path resolution - Introduce proper validation for skill names and directory existence - Change Codex wrapper to use project_path instead of workspace_path for skills - Add SKILL.md requirement validation for project skills - Remove redundant skill processing logic from individual wrappers * feat(daily_paper): add daily paper workflow with PDF analysis and brief generation - Implement shared state management and file helpers for daily-paper steps - Add PDF download and text extraction capabilities with arXiv integration - Create paper collection step with Hugging Face weekly/monthly rankings - Build ranking system using reciprocal-rank fusion with memory keyword scoring - Add Claude Code integration for paper analysis and detailed note generation - Implement digest step to create final five-minute brief from detailed notes - Add configuration for standalone daily cookbook application with cron scheduling - Create typed schema for paper information, selection, and output formats - Add atomic file writing with temporary file safety mechanisms - Implement exclusion logic for previously recommended papers and daily filters * feat(daily_paper): add DingTalk notification integration and enhance logging - Integrate DingTalk markdown send step to notify groups about daily paper briefs - Add comprehensive logging throughout daily paper workflow including start/finish events - Update daily paper analysis prompt to include code repository context requirement - Configure DingTalk notification in daily_cookbook.yaml with app credentials - Add dingtalk-stream dependency for proactive message API integration - Enhance daily paper README with DingTalk notification section and updated flow chart - Implement detailed logging for each step including paper processing and agent calls - Add test coverage for DingTalk markdown sending functionality and configuration - Update pre-commit config to exclude skills directory from checks - Add .claude/skills to gitignore for local development environment * refactor(dingtalk): move dingtalk_stream import to local scope and improve code safety - Moved global dingtalk_stream import to local scope in send.py to avoid eager loading - Added dynamic import with error handling for optional dependency cases - Updated test suite to verify lazy loading behavior works correctly - Fixed markdown title generation by using safe variable naming in wait.py - Enhanced test coverage for arxiv PDF download caching functionality - Updated application context initialization with proper resource directory configuration - Modified paper metadata to include source PDF path reference in output files * refactor(daily_paper): remove manifest system and store selection metadata in digest files - Remove JSON manifest creation and storage functionality - Store selection data directly in digest file frontmatter instead of separate manifest files - Add load_saved_selection method to rebuild selection from digest and paper-note metadata - Update README documentation to reflect new cookbook workflow architecture - Modify test cases to verify selection metadata in digest files instead of manifest JSON - Remove unused json import from multiple daily paper modules - Integrate PaperSelection schema for proper data validation in stored metadata * docs(daily_paper): add bilingual cookbook guides	2026-07-22 19:17:01 +08:00
jinliyl	e7d44f6f3b	refactor(agent): unify agent subprocess env, sessions, skills, and MCP/service jobs (#382) ... * feat(config): add environment variable configuration for agent subprocesses - Add environment field to ApplicationConfig to store variables for agent subprocesses - Remove dynamic loading of .env files in agent wrappers - Introduce subprocess_environment property in base agent wrapper - Pass application-level environment variables to Claude Code and Codex agents - Load environment variables once at startup and pass to ReMe application - Remove dependency on load_env utility in agent wrapper implementations - Update tests to use configured environment instead of dynamic loading - Remove unused environment loading utilities and related test cases * refactor(mcp): remove channel notification system and related components - Removed channel notification step implementation - Removed claim channel step implementation - Removed ChannelSink class from MCP service - Removed channel-related documentation from AGENTS.md - Removed channel instruction text from MCP service - Removed all channel-related tests - Updated application context metadata comment to remove channel sink reference - Removed channel module initialization and imports * feat(service): add job whitelisting capability to BaseService - Add optional jobs parameter to BaseService.__init__ to configure job whitelist - Store jobs as set in self.jobs attribute for efficient lookup operations - Modify add_jobs method to filter jobs based on whitelist configuration - Update documentation in both English and Chinese to describe new feature - Add comprehensive unit tests for job whitelisting behavior - Implement flowchart update showing new filtering logic - Preserve existing enable_serve flag behavior alongside new whitelisting * refactor(service): enhance service job validation and MCP tool injection - Add strict validation for service jobs whitelist with detailed error messages - Implement injected job arguments support for MCP services with conflict detection - Add tool error handling for unsuccessful responses in MCP services - Remove duplicate job names in Codex agent wrapper using dict.fromkeys - Update MCP server argument format from single JSON array to repeated --job flags - Add comprehensive test coverage for job injection and error handling scenarios - Update documentation to reflect service job validation and MCP features - Ensure application cleanup occurs even when service lifespan encounters errors * feat(agent): update skill handling to preserve existing Claude skills - Change skills parameter processing to use 'all' instead of filtered list - Add logic to select project skills without restricting Claude's existing skills - Update variable naming from 'skills' to 'selected_skills' for clarity - Modify application context metadata documentation to clarify in-memory state usage - Add test case to verify configured skills are added without filtering existing skills - Update internal skill directory handling to use renamed variable consistently * refactor(agent): restructure agent wrapper components and session storage - Move CcFileSessionStore to separate module for better organization - Add SDK package version logging in base agent wrapper - Update Claude Code agent to use new session store structure with project keys - Refactor Claude Code agent wrapper to use proper type hints and SDK integration - Add support for server tool use events in Claude Code message processing - Improve error handling and resource cleanup in streaming operations - Update Codex agent wrapper with proper type annotations and configuration - Remove deprecated system prompt mode handling from Claude Code wrapper - Fix session path construction for Claude Code transcript storage - Update dependency injection and configuration handling patterns * fix(cc_agent_wrapper): resolve Claude Code SDK integration issues - Added dataclass import and created _BlockState for content block metadata tracking - Implemented proper MCP server name constant and tool context ID validation - Fixed tool_context_id injection to prevent duplicate assignment errors - Resolved skills parameter handling in build_options method - Enhanced job tools integration with MCP servers mapping validation - Replaced deprecated block_ids/block_types/tool_call_names with block_states dict - Updated message_delta to emit USAGE chunks instead of REPLY_END - Fixed stream result handling to ensure proper REPLY_END emission - Improved error handling for session mirror failures and rate limits - Added proper cleanup for expected trailing errors in streams - Refactored Codex agent wrapper initialization and configuration management - Removed obsolete system_prompt_mode from default config - Enhanced test coverage for new block state and error handling features - Fixed async generator handling with aclosing context manager - Improved chunk type mapping for Claude Code SDK events * refactor(tests): remove demo config tests from config parser test suite - Removed test_demo_config_registers_llm_jobs function and its assertions - Eliminated verification of LLM demo job configurations - Removed checks for agent wrapper component settings - Deleted assertions for model configurations and parameters - Cleaned up deprecated test cases related to demo config parsing * refactor(evolve): simplify Claude Code session store path structure - Removed redundant project key subdirectory from session link generation - Updated CcFileSessionStore initialization to use direct session directory path - Maintained existing session layout compatibility for backward compatibility - Added unit tests to verify session persistence behavior with existing transcripts - Ensured UUID-based session files remain accessible at expected locations - Preserved existing session directory structure without additional nesting * refactor(agent): defer optional Codex SDK imports until first use - Moved openai-codex imports inside functions to avoid mandatory dependencies - Added TYPE_CHECKING guard for development time type checking only - Implemented lazy loading mechanism with _get_async_codex_class function - Updated AsyncCodex initialization to occur on demand rather than at module level - Maintained backward compatibility while improving import performance - Added test case to verify package import works without optional Codex SDK - Updated agentscope dependency to version 2.0.4.post1 in pyproject.toml * test(embedded): add compatibility tests for in-process ReMe embedding - Add test suite for QwenPaw-style embedded configurations - Verify optional defaults remain preserved in embedded configs - Ensure in-process application API stays compatible - Test model injection and lifecycle management compatibility - Remove obsolete hermes agent plugin tests - Update CLI import test to cover multiple optional SDKs - Block claude_agent_sdk and openai_codex during import testing	2026-07-20 23:52:14 +08:00
jinliyl	cf22ef3b1d	feat: add codex auth modes, background embedding/index repair, and qwenpaw logging (#371) ... * feat(codex): add authentication mode support with thread-safe logging - Implement _CodexAuthConfig dataclass for resolved auth settings - Add auth_mode parameter with auto/api_key/oauth options - Separate API key and OAuth authentication flows - Force specific login method based on auth mode - Add explicit API key validation requirement - Serialize concurrent logger initialization in thread lock - Close logging handlers properly during cleanup - Update default config with auth_mode presets for codex and codex_oauth - Add comprehensive tests for authentication modes and concurrent logging * feat(file_store): implement background embedding backfill and keyword index repair - Add _after_embedding_backfill hook in FAISS local file store - Schedule startup embedding repair without delaying component readiness - Cancel and collect embedding backfill task during component shutdown - Log progress at fixed percentage boundaries for long-running operations - Process embedding backfill in configurable batch sizes with progress reporting - Rebuild keyword index in bounded batches with detailed mismatch diagnostics - Format stdlib logs consistently with QwenPaw console output using relative paths - Run embedding backfill as background task that doesn't block component startup - Add comprehensive tests for background embedding and keyword index repair scenarios * fix(file-store): repair graph-chunk consistency on load - Add _repair_graph_chunk_consistency method to detect and fix mismatched graph/chunk states - Clear torn graph/chunk state when missing or orphaned chunks are detected - Ensure keyword index sync handles empty chunks properly - Add comprehensive tests for graph-chunk consistency scenarios - Update test utilities to properly seed graph/chunk snapshots - Increment version to 0.4.1.2 * feat(file_io): enhance list step response format and add comprehensive logging - Format list output with bullet points for better readability - Add explicit "No files found" message when directory is empty - Include detailed timing information for file store startup phases - Add logging for chunk loading, graph consistency checks, and keyword indexing - Provide detailed metrics for embedding backfill operations - Add comprehensive test coverage for empty directory scenarios - Include batch processing statistics for embedding operations * feat(logger): add QwenPaw logging integration with forwarding mechanism - Introduce _ForwardToLoggerHandler to forward log records to target logger - Add qwenpaw logger integration that forwards ReMe logs to QwenPaw handlers - Maintain ReMe logger stability for modules that cache it at import time - Enable QwenPaw handlers to take effect without ReMe reconfiguration - Add comprehensive tests for stdlib forwarding to QwenPaw sinks - Support explicit REME_DISABLE_LOGURU=false to keep original Loguru backend - Preserve existing logging behavior when QwenPaw is not configured * fix(file_store): serialize concurrent FAISS dump operations to prevent corruption - Add asyncio lock to ensure only one FAISS dump operation runs at a time - Generate unique temporary filenames using UUID tokens for atomic replacement - Implement proper cleanup of temporary files in finally block - Add comprehensive test to verify concurrent dumps are serialized - Ensure atomic writes by replacing both index and idmap files together - Prevent partial state writes during concurrent access scenarios	2026-07-20 14:47:34 +08:00
Sen Huang	1c08eaa559	fix: enforce markdown chunk byte limits (#370)	2026-07-17 22:03:58 +08:00
Sen Huang	987f275985	fix: bound markdown chunking for large section trees (#369)	2026-07-17 17:57:56 +08:00
jinliyl	c1a25e9ff4	feat(agent): add Codex agent wrapper and ReMe MCP bridge (#358) ... * feat(agent): add Codex wrapper integration * feat(agent): enhance agent wrapper functionality and add comprehensive testing - Implement structured output schema normalization across all wrappers - Add Claude Code system prompt mode support with append/replace options - Introduce Codex agent wrapper with streaming, tool context isolation, and skill management - Enhance skill linking with validation and conflict resolution - Add approval event streaming support for Codex wrapper - Implement output schema validation and normalize function - Create dedicated test suites for Claude Code and Codex integration - Update README documentation for Codex wrapper capabilities - Refactor kwargs merging with proper schema handling - Add tool context validation when resuming sessions - Implement proper cleanup and session management for Codex wrapper * test(cc-agent): add test coverage for structured output scenarios - Add docstring for empty schema validation in build_options - Document falsy structured output preservation behavior - Add docstring for streaming wrapper schema rejection - Include lambda function reference for wrapper factory consistency - Add test documentation for live Codex wrapper contract exercise * docs: revert README changes * fix(agent): interrupt abandoned Codex turns	2026-07-17 13:39:18 +08:00
jinliyl	2a85c36fa9	refactor(embedding): defer provider construction until first remote call (#361) ... - Changed dimensions property to avoid forcing provider construction - Added _ensure_model method to construct provider on demand - Modified __call__ to ensure model exists before use - Updated _start to defer provider initialization - Removed eager health check during startup - Added compact embedding serialization with base64 encoding - Implemented batch processing for vector search with heap-based ranking - Added document_ids property to keyword index interface - Updated chunk persistence to handle legacy JSON embeddings - Optimized memory usage by avoiding materialization of metadata in document_ids	2026-07-15 20:46:36 +08:00
jinliyl	b5e0ec2d8d	Modify budget calculation for text limit safety margin ... Adjust budget calculation to use 92% margin for token estimation.	2026-07-14 11:05:08 +08:00
jinliyl	bf7ca17705	feat(benchmark): add LongMemEval golden answer validation (#335) ... * feat(benchmark): add golden answer validation and session review for LongMemEval - Introduce GoldenCheckStep to validate LongMemEval golden answers using structured verdicts - Add SessionReviewStep to extract query/answer-relevant evidence from all sessions - Implement concurrent session processing with configurable concurrency limits - Create check_golden job configuration with lme_review and lme_judge agent wrappers - Add Qwen3.7-plus model configuration for enhanced processing capabilities - Include python_execute tool integration for agent-based reasoning and date validation - Generate comprehensive JSON output with session summaries and validation verdicts - Add run_check_golden.py script for batch processing across all LongMemEval samples - Configure proper logging initialization with console and file output options - Update component registry and file I/O modules to support new benchmark features * feat(scripts): add script to summarize LongMemEval check_golden verdicts - Parse check_golden.json files across all LongMemEval samples - Calculate accuracy metrics for golden answers and session IDs - Provide breakdown by question type with percentage calculations - Add command line options for listing bad samples and JSON output - Include progress tracking showing completed vs pending samples - Display confidence scores and date sanity checks statistics * refactor(benchmark): move golden check scripts to longmemeval directory - Moved run_check_golden.py from scripts/ to benchmark/longmemeval/ - Moved stats_check_golden.py from scripts/ to benchmark/longmemeval/ - Updated path resolution to use parents[2] instead of parent.parent - Added new --list-run-failed option to stats script - Added logging directory constant and functions for tracking launched samples - Enhanced stats output with launched count and run failure information - Improved error reporting with run failure details and log file paths * feat(benchmark): add LongMemEval agentic answer workflow with session extraction - Add LmeAgenticAnswerStep, LmeAutoMemoryStep, and LmeExtractSessionStep to __init__.py - Create shared helper render_with_source for displaying search results with session_id - Implement agentic_answer step with vector_search, bm25_search, and extract_session_by_id tools - Add auto_memory step to convert each session into search-friendly daily notes - Create extract_session step to retrieve and analyze raw session content by session_id - Update jinli_lme.yaml with auto_memory, vector_search, bm25_search, and agentic_answer jobs - Configure lme_memory, lme_extract, and lme_agentic_answer agent wrappers - Enhance search steps with include_source option to show session_id metadata - Add proper session_id tracking and collision handling in daily note generation * feat(benchmark): add LongMemEval agentic answer evaluation pipeline - Add session_id tracking to agentic_answer.py result metadata - Introduce run_agentic_answer.py driver for complete pipeline execution - Implement auto_memory, update_index, and agentic_answer job orchestration - Add concurrent execution with configurable limits and staggering - Create aggregation script for collecting tool-call trails and results - Add stats_agentic_answer.py for comprehensive result analysis - Implement resume capability with existing output detection - Generate aggregate.json with per-sample breakdown and tool call summaries * feat(steps): add ClearPathsStep for cleaning workspace outputs before rebuild - Introduce ClearPathsStep to remove stale workspace files/directories - Add support for specifying paths and config_keys as targets to clear - Implement safety checks to prevent deletion of files outside workspace - Add logging for cleared paths and warnings for invalid paths - Configure clear_paths_step in jinli_lme.yaml to clean daily_dir - Add clear_paths_step to clean mem_answer.json before rebuilds * feat(benchmark): add resume functionality to agentic answer runner - Replace --force flag with --resume flag for controlling job execution - By default every job reruns with clean rebuild behavior using config clear steps - Add --resume option to skip samples whose output already exists and continue interrupted batches - Update documentation to reflect new default clean rebuild behavior - Modify job skipping logic to honor resume flag instead of force flag - Update dry-run output to show correct todo jobs based on resume status - Change default example command to use --resume for continuing interrupted runs * feat(benchmark): generate JSONL output for check golden records - Add write_check_golden_list function to create JSONL file - Write all readable check_golden records as JSONL format - Include check_golden_list path in stats output - Display generated JSONL file path in summary report - Maintain UTF-8 encoding with non-ASCII character support * refactor(benchmark): rename answer judge step and integrate LME LLM judge - Rename AnswerJudgeStep to LmeLlmJudgeStep and update imports - Add new llm_judge configuration in jinli_lme.yaml - Update run_agentic_answer.py to include llm_judge in pipeline - Modify LmeLlmJudgeStep to read from query.json and answer.json - Write LLM judgement results back to mem_answer.json - Add command line options for start/end sample range selection - Update aggregate.json generation to include LLM judgement data - Add resume capability for llm_judge job based on judgement presence * refactor(benchmark): rename answer judge step and integrate LME LLM judge - Rename AnswerJudgeStep to LmeLlmJudgeStep and update imports - Add new llm_judge configuration in jinli_lme.yaml - Update run_agentic_answer.py to include llm_judge in pipeline - Modify LmeLlmJudgeStep to read from query.json and answer.json - Write LLM judgement results back to mem_answer.json - Add command line options for start/end sample range selection - Update aggregate.json generation to include LLM judgement data - Add resume capability for llm_judge job based on judgement presence * feat(steps): add wait_for_paths_step to block until workspace files exist - Introduce WaitForPathsStep class that polls for required workspace-relative paths - Add step registration with 'wait_for_paths_step' backend identifier - Implement path validation to ensure targets are within workspace boundaries - Add polling mechanism with configurable intervals via poll_seconds parameter - Include logging functionality with log_every_seconds parameter for status updates - Add metadata tracking of waited paths and duration in response object - Register step in index module and expose in public API - Configure step in jinli_lme.yaml to wait for session_review.json before golden check - Add script rename from run_check_golden.py to run_golden_check.py with enhanced options * feat(benchmark): enhance longmemeval benchmarking with concurrency and progress tracking - Add benchmark extra dependency group with portalocker requirement - Introduce concurrent execution support for golden_check and session_review workflows - Add progress reporting interval option with real-time status updates - Implement global throttling mechanism for session review requests using file locks - Enhance golden check validation with current schema verification - Add active task tracking and graceful shutdown handling - Rename check_golden scripts to golden_check for consistency - Update statistics reporting with correct/incorrect terminology instead of reasonable - Add stale format detection and compatibility handling for verdict fields - Include both_correct rate calculation in accuracy metrics - Add concurrency and staggering options for better resource management * ci(workflow): add Windows smoke test workflow - Create new workflow file .github/workflows/windows-smoke.yml - Configure workflow to trigger on push and pull request events - Set up Python environment with version 3.11 - Install package dependencies using pip - Run version job as smoke test for CLI functionality - Enable concurrency control to prevent duplicate runs - Use matrix strategy for Python version testing * feat(benchmark): add retry mechanism and health check for session review - Added retry configuration options (retry_initial_seconds, retry_max_seconds, retry_max_attempts) to jinli_lme.yaml - Implemented exponential backoff retry logic with configurable parameters in session_review step - Added output_is_healthy function to verify session_review.json integrity and absence of failed reviews - Updated resume functionality to skip only healthy outputs instead of all existing files - Integrated JSON parsing and validation to check for failed reviews in output files - Enhanced error handling and logging for retry attempts and recovery scenarios * feat(benchmark): add LongMemEval session review statistics script - Create stats_session_review.py to summarize session_review.json artifacts - Add command line options for listing failed, missing, and run failed samples - Implement JSON output mode for programmatic consumption - Calculate and display health statistics including total samples, healthy outputs, failed sessions - Provide detailed failure information with session IDs and error messages - Generate re-run commands for samples with failed reviews - Add percentage calculations for better statistical overview - Include support for multiple output formats and detailed logging * feat(benchmark): add LongMemEval output cleanup script and enhance golden check retry logic - Added clean_sample_outputs.py script to remove generated LongMemEval files while preserving source inputs - Implemented configurable retry mechanism in golden_check.py with exponential backoff strategy - Added retry parameters (initial/max seconds and max attempts) to control failure recovery behavior - Integrated asyncio support for asynchronous sleep during retry intervals - Configured default retry settings in jinli_lme.yaml with 5s initial and 300s maximum intervals - Preserved core files (query.json, answer.json, session/) while cleaning generated artifacts * feat(benchmark): add AppleDouble file cleanup to sample output cleaner - Remove AppleDouble files starting with '._' recursively including under session/ - Add is_under helper function to check if path is inside parent directory - Track targets in set to avoid duplicate processing - Include AppleDouble files in cleanup targets when not already covered by existing targets - Maintain dry-run mode as default behavior with --apply flag for actual deletion * refactor(benchmark): update LongMemEval sample output cleaning script - Add time and Iterator imports for enhanced functionality - Add --progress-every argument to control progress reporting frequency - Replace is_under function with iter_sample_targets generator - Implement detailed progress tracking with timing measurements - Add sample-by-sample processing with elapsed time reporting - Include AppleDouble file detection within session directory - Update target counting and deletion statistics display - Add conditional progress updates based on progress-every setting - Improve dry-run mode with would-delete indication * chore(benchmark): increase initial interval for session review step - Changed START_INTERVAL_SECONDS from 1.0 to 3.0 seconds - Adjusted timing parameters for better benchmark stability * refactor(benchmark): implement coordinated retry mechanism for session reviews - Add retry gate condition to coordinate concurrent review attempts - Implement wait_for_healthy_start_slot to handle sequential retries - Create mark_retrying and mark_recovered functions to track retry states - Update reply_with_retry to accept index parameter for coordination - Add has_prior_retry logic to prevent race conditions during recovery - Ensure proper cleanup of retry state on success or failure - Maintain backward compatibility while adding coordination features * chore(benchmark): adjust session review start interval timeout - Changed START_INTERVAL_SECONDS from 3.0 to 5.0 seconds - Increased initial delay for session review benchmark step - Updated timeout configuration for improved stability * refactor(benchmark): update session review concurrency and throttling mechanism - Replace global throttle with per-process concurrency control - Add concurrency parameter with default value of 30 in config - Add start_interval_seconds parameter with default value of 2 seconds - Change default concurrency from 3 to 1 in command line interface - Update documentation to reflect new throttling behavior - Implement semaphore-based concurrency limiting for review tasks - Modify retry mechanism to use local locking instead of global files - Remove portalocker dependency for cross-process throttling * refactor(config): update session review configuration and concurrency settings - Removed deprecated retry configuration parameters from jinli_lme.yaml - Increased MAX_CONCURRENCY from 30 to 60 in session_review.py - Reduced START_INTERVAL_SECONDS from 2.0 to 1.0 in session_review.py - Cleaned up redundant backend specifications in configuration file - Simplified agent wrapper configurations by removing obsolete retry settings * feat(benchmark): enhance LME auto memory step with advanced scheduling and error handling - Add datetime parsing functionality for LongMemEval timestamps with regex pattern - Implement configurable concurrency limits with MAX_CONCURRENCY of 60 - Introduce retry mechanism with exponential backoff for agent interactions - Add session filtering based on date comparison with question_date validation - Create rate limiting with start interval control between requests - Implement sophisticated retry coordination using asyncio conditions - Add comprehensive error tracking for failed and filtered session extracts - Remove deprecated concurrency parameter from jinli_lme.yaml configuration - Add structured output validation in session review step - Include detailed metadata reporting with session statistics and errors * fix(benchmark): adjust default concurrency for auto_memory job - Changed default concurrency from 3 to 1 for auto_memory job to prevent API overload - Updated help text to reflect new default value of 1 for concurrency parameter - Modified documentation to clarify concurrency behavior varies by job type * refactor(search): replace hardcoded candidate multiplier with constant - Introduced _CANDIDATE_MULTIPLIER constant set to 10 - Replaced hardcoded factor of 5 with _CANDIDATE_MULTIPLIER in BM25 search - Replaced hardcoded factor of 5 with _CANDIDATE_MULTIPLIER in vector search - Updated test to verify both search steps use ten times limit for candidates - Imported VectorSearchStep and Bm25SearchStep in test module - Added comprehensive test case for candidate count calculation logic * feat(lme): add data inspection error handling with fallback mechanism - Implemented non-retryable data inspection error markers detection - Added _is_data_inspection_error method to identify inspection failures - Created fallback handling for data inspection errors in auto memory extraction - Added fallback handling for data inspection errors in session review - Extended failed extracts tracking with non-retryable and fallback flags - Separated fallback extracts from regular failed extracts in reporting - Enhanced error logging with specific data inspection failure messages - Updated metrics to track fallback extractions and reviews separately - Maintained existing retry logic for other exception types * feat(benchmark): enhance session review statistics with fallback tracking - Add support for identifying and listing non-retryable fallback reviews - Introduce --list-fallback argument to display fallback review details - Separate retryable failures from non-retryable fallbacks in reporting - Track fallback samples and sessions separately from failed ones - Update console output to show both retryable and non-retryable categories - Include fallback details in JSON output with reasons and session info - Modify failure counting logic to distinguish between retryable and fallback reviews * feat(benchmark): add question_id tracking and enhanced fallback reporting - Add question_id function to extract query.question_id from data - Initialize question_id_by_id dictionary to store question IDs by index - Store question_id for each sample during data processing - Enhance fallback output to include question IDs and session information - Format sample labels with question IDs when available - Display session IDs associated with each fallback case * feat(benchmark): add question_id support and improve bad sample reporting - Add question_id_for function to extract question_id from multiple sources - Add sample_label function to format samples as idx(question_id) when available - Store question_id in data dictionary during processing - Change bad_golden and bad_sessions to store full records instead of just indices - Update list_bad output to show formatted labels with question_id information - Improve error reporting with more detailed sample identification * feat(benchmark): enhance golden check stats with structured output - Add related_session_ids function to extract session IDs from verdict records - Create grouped_records function to group records by question type - Replace flat list output with JSON-formatted grouped records in list_bad option - Replace flat list output with JSON-formatted grouped records in list_bad_sessions option - Maintain Chinese labels while adding structured data presentation - Improve readability of bad verdict record display with hierarchical grouping * feat(benchmark): update data structure for question indexing - Replace sample_label with _idx field for index tracking - Add question_id field to store _question_id values - Maintain backward compatibility with empty string defaults - Preserve existing session_id functionality - Update data mapping to include new fields in grouped results * refactor(benchmark): streamline golden answer verification process - Replace relevance filtering with comprehensive information extraction - Remove is_relevant field and simplify session summary structure - Change relevant_info to extracted_info for clarity - Update golden check logic to work with full extractions instead of filtered summaries - Simplify prompt instructions to focus on complete information extraction - Remove redundant schema validation and structured output requirements - Adjust statistics calculation to match new extraction approach - Update metadata field names to reflect extraction rather than relevance checking * feat(benchmark): add selective file deletion option to clean_sample_outputs - Add --filename argument to delete only specific root-level files - Modify iter_sample_targets function to accept optional filenames filter - Implement validation for root-level filename constraints - Update function calls to pass filenames parameter - Add example usage for selective file deletion in documentation * feat(benchmark): add error count metrics to golden check statistics - Added golden_bad, session_bad, and both_bad calculation fields - Updated console output format to include error counts per question type - Modified table display to show both accuracy rates and error numbers - Enhanced statistical summary with additional error breakdown metrics * test(search): update search step tests with include_source parameter - Added include_source=False parameter to VectorSearchStep initialization - Added include_source=False parameter to Bm25SearchStep initialization - Maintained existing RuntimeContext parameters for both search steps - Updated test calls to match new constructor signature with include_source option	2026-07-13 21:26:27 +08:00
jinliyl	b1c9bf67bf	fix(embedding): make input truncation CJK-aware (#337) ... * fix(embedding): make input truncation CJK-aware * test(embedding): cover CJK-aware truncation budget	2026-07-13 17:43:48 +09:00
Ziyang Guo	c5eefe4da3	fix(search): expose markdown frontmatter on chunks (#314) ... * fix(search): expose markdown frontmatter on chunks * style(search): apply pre-commit formatting * fix(search): make frontmatter chunk metadata opt-in * fixup! fix(search): expose markdown frontmatter on chunks * feat(markdown): add include_frontmatter_keys_in_metadata allow-list opt-in --------- Co-authored-by: RerankerGuo <1875366113@qq.com> Co-authored-by: Ziyang Guo <121015044+RunMarshal@users.noreply.github.com>	2026-07-08 17:59:55 +09:00
jinliyl	2612d25959	feat(lme): add cli execution and agentic search tooling (#334) ... * feat(service): add CLI service for local job execution - Introduce CliService to execute single jobs locally without serving ports - Add prepare_start_config and should_precheck_start functions for CLI job setup - Update reme start command to use CLI service when job argument is provided - Change default service backend from http to cli in jinli_lme config - Modify SearchStep to use constants and rename configuration parameters - Add unit tests for CLI service functionality and configuration handling - Update file extension support to include json format in addition to md and jsonl * feat(search): add BM25 and vector search steps with configuration updates - Add Bm25SearchStep and VectorSearchStep classes with tool context deduplication - Register new search step components in index module - Update configuration to use separate vector_search and bm25_search endpoints - Modify LLM models from qwen3.7-plus/glm-5.1 to glm-5.2 variants - Adjust search parameters and remove hybrid search implementation - Configure embedding store as default in storage settings - Remove auto-memory and file catalog configurations - Update watch directories from multiple paths to session_dir only * feat(agent): add tool result offloading and workspace management - Add tool_results_dir configuration option for offloaded tool results storage - Implement ToolResultOffloadMiddleware to persist large tool results to files - Create WorkspaceBackend to standardize file operations across tools - Add configurable builtin tools selection with sequential execution option - Integrate middleware support for agent wrapper with offloading capability - Update application initialization to create tool results directory - Add safety mechanisms for filesystem operations with sanitized filenames - Enhance agent wrapper with configurable working directory handling - Upgrade agentscope dependency to version 2.0.4 for improved features # Conflicts: # reme/application.py * feat(benchmark): add LongMemEval agentic search and result management - Introduce AgenticAnswerStep for agent-based history search - Add LmePrepareJudgeStep and LmeSaveResultStep for evaluation pipeline - Implement AddDraftStep and ReadAllDraftStep for evidence accumulation - Update configuration with new agent wrapper and search parameters - Add comparison script for analyzing agent run differences - Include documentation for LongMemEval failure analysis - Enhance tool result offloading with skip options - Modify search defaults and indexing behavior * feat(agent): implement tool result offloading with system reminders - Added tool_result_offload_message parameter to agent wrapper reply method - Implemented configurable reminder template for offloaded tool results - Created system reminder messages when tool results are offloaded to files - Added Chinese user message template for agentic answer step - Updated tool result offloading middleware to use custom reminder templates - Enhanced agentic answer instructions to handle long tool results via draft storage * feat(scripts): add LongMemEval results summarization tool - Create summarize_lme_results.py script to analyze result JSON files - Implement command line interface with answer id and dataset root options - Add support for specifying index range with start and end parameters - Include option to show failure details and non-successful completions - Calculate completion statistics and accuracy metrics - Display detailed breakdown of yes/no/other judgements - Handle missing and unreadable result files gracefully - Format output with percentages and comprehensive summary statistics * feat(summarize_lme_results): add question type breakdown to result summary - Import defaultdict from collections module - Add by_type dictionary to track statistics by question type - Count completed, yes, no, and other responses for each question type - Display detailed breakdown table showing accuracy by question type - Include question type column when processing judgements - Print comprehensive summary with question type distribution - Calculate and display accuracy percentage for each question type category * feat(lme): switch to qwen3.7-max model and add shuffle functionality - Changed default LLM model from glm-5.1 to qwen3.7-max in jinli_lme.yaml - Added random module import for shuffle functionality - Implemented --shuffle argument with BooleanOptionalAction for dataset shuffling - Added --seed argument to control random seed for reproducible shuffling - Applied random shuffle to dataset indices when shuffle is enabled - Added console output showing shuffle operation and seed information * fix(cli): set default random seed for shuffle functionality - Changed default seed value from None to 42 for consistent shuffling behavior - Ensures reproducible results when using shuffle option without explicit seed - Maintains backward compatibility while providing deterministic defaults * refactor(benchmark): update agentic answer guidelines for grounding - Updated English instruction to emphasize strict grounding in retrieved context - Modified Chinese instruction to stress evidence-based responses without inference - Removed redundant conciseness requirement in both language versions - Enhanced clarity on proper use of draft saving and retrieval mechanisms - Strengthened emphasis against hallucination of unsupported facts * refactor(benchmark): update agentic search instructions and configuration - Replace separate vector_search and bm25_search with unified search tool - Update agent instructions to use single search tool with multiple strategies - Simplify Chinese instructions for search methodology - Add comprehensive search tool configuration with hybrid vector/BM25 capabilities - Increase model retry attempts from 1 to 3 for better reliability - Remove redundant tool references from job_tools list * feat(search): add configurable search limit with environment variable support - Remove hardcoded limit and min_score parameters from config schema - Increase LLM context size from 200000 to 1000000 - Add REME_SEARCH_LIMIT environment variable support for search configuration - Implement command line argument --search-limit to override default search limit - Add input validation to ensure search limit is positive - Modify subprocess execution to pass environment variables - Update search step to use dynamic default limit from environment or fallback to 5 * refactor(benchmark): remove agentic answer step and related configurations - Removed AgenticAnswerStep class and its registration - Deleted agentic_answer.yaml prompt configuration file - Removed agentic answer related job definitions from jinli_lme.yaml - Cleaned up tool result offloading middleware implementation - Removed tool_results_dir configuration field from application config - Deleted comparison and analysis scripts for agent runs - Removed agentic answer step from LME init module exports - Updated agent wrapper to remove tool result offloading functionality - Removed unused imports and dependencies in agent wrapper module * refactor(benchmark): remove unused LME result processing components - Removed LmePrepareJudgeStep and LmeSaveResultStep classes from benchmark module - Cleaned up imports and exports in lme module initialization - Removed unused middleware configuration from agent wrapper - Deleted obsolete result.py file containing deprecated result processing logic - Simplified agent instantiation by removing middleware parameter - Updated import statements to reflect removed dependencies * refactor(index): remove unused search steps and update imports - Remove Bm25SearchStep and VectorSearchStep from index steps module - Remove unused prepare_start_config and should_precheck_start exports - Move import statements to proper location in reme.py - Update test module to use direct import path for CliService - Remove vector_search and bm25_search configurations from jinli_lme.yaml - Add workspace directory environment variable configuration - Add docstring to getcwd method in agent wrapper - Remove empty middleware list from agent wrapper initialization * feat(index): add BM25 and vector search steps with tool context deduplication - Add Bm25SearchStep for plain BM25 keyword search with tool_context deduplication - Add VectorSearchStep for plain vector search with tool_context deduplication - Implement tool context state management with TTL-based deduplication - Add support for chunk deduplication across tool contexts within TTL window - Update index steps module to include new search step classes - Add test coverage for CLI metadata output functionality - Refactor CLI service to remove unused show_status parameter - Update documentation comments to reflect internal service configuration * feat(steps): add Python code execution capability - Introduce PythonExecuteStep to run Python code in subprocess - Add configuration for python_execute step in jinli_lme.yaml - Register python_execute in available tools list - Implement timeout handling with default 60 second limit - Capture stdout/stderr output and return code metadata - Add comprehensive unit tests for execution scenarios - Support workspace directory context for code execution - Handle timeout errors and runtime exceptions gracefully * refactor(python_execute): replace subprocess with asyncio for Python code execution - Replace subprocess.run with asyncio.create_subprocess_exec for non-blocking execution - Add _PythonResult dataclass to encapsulate execution results and timeout status - Implement proper timeout handling with asyncio.wait_for and process.kill() - Update metadata to include returncode and stderr when timeout occurs - Convert synchronous _run_python method to asynchronous implementation - Maintain backward compatibility while improving execution reliability * refactor(python_execute): replace subprocess with asyncio for Python code execution - Replace subprocess.run with asyncio.create_subprocess_exec for non-blocking execution - Add _PythonResult dataclass to encapsulate execution results and timeout status - Implement proper timeout handling with asyncio.wait_for and process.kill() - Update metadata to include returncode and stderr when timeout occurs - Convert synchronous _run_python method to asynchronous implementation - Maintain backward compatibility while improving execution reliability	2026-07-08 17:43:09 +09:00
xyf2020	82971ac5b0	feat(chunker): better json chunker and json chunker (#325) ... * feat(file_chunker): add dedicated JSON and JSONL file chunkers - Add JsonFileChunker: structure-aware chunking preserving nested key paths, optional list-to-dict conversion, size measured by json.dumps() char count - Add JsonlFileChunker: line-aligned sliding-window chunking with configurable overlap, supports char/byte mode switching - Register both chunkers in default.yaml (json for .json, jsonl for .jsonl) - Add comprehensive unit tests (21 + 20 test cases) * chore(config): update default chunker supported_extensions to txt/log * refactor(json_chunker): optimize _build_tree O(n²) serialization and rewrite tests - Fix O(n²) redundant json.dumps in _build_tree: * Empty containers handled directly as leaves (0 serialization) * Non-empty containers recurse first, then reconstruct+dump once * Only containers that become leaves pay serialization cost - Add _reconstruct_object/_reconstruct_array helpers - Remove dead code: _merge_json method - Apply user changes: min_element_size formula 0.01->0.05, threshold < to <= - Use indent=None for compact output (consistent with _SizeNode estimation) - Remove unused _text_size from JsonlFileChunker Test rewrite: - Replace try/finally boilerplate with make_json fixture - Group tests into TestXxx classes with pytest.mark.parametrize - Add TestOutputValidation: 9 parametrized scenarios verifying: * All chunks are valid JSON * Text length <= chunk_chars (with single-leaf tolerance) * Leaf-value concatenation matches original data (dict + array roots) - Add TestSizeNode: incremental size accuracy tests - Add TestDfsAlgorithm: path wrapping, DFS order, calibration tests - Update test_min_element_size_formula for new 0.05 multiplier - Update test_build_tree_structure for larger min_element_size * chore: apply black formatting to test files	2026-07-08 15:18:59 +08:00
jinliyl	eb471d7d94	fix(embedding): reject mismatched embedding dimensions (#330) ... * fix(embedding): enforce strict dimension matching for embeddings - Add _embedding_dim_matches method to validate embedding dimensions - Reject embeddings with mismatched dimensions instead of padding/truncating - Drop stale embeddings with wrong dimensions during loading and upsert operations - Disable embedding store when query dimensions don't match configured dimensions - Fail health checks when embedding dimensions don't match expected values - Skip chunks with wrong dimensions during FAISS index rebuild - Add comprehensive tests for dimension validation behavior * refactor(file_store): simplify conditional checks in vector search and test assertions - Combine multiple conditionals into single check for empty FAISS index - Replace explicit empty list comparison with boolean check for node embedding calls - Maintain same functional behavior while improving code readability * fix(embedding): harden dimension validation helpers	2026-07-08 14:23:38 +09:00
jinliyl	38cf16071b	refactor(embedding): update embedding model initialization and session storage paths (#329) ... * refactor(embedding): update embedding model initialization and session storage paths - Remove unused inspect import from as_embedding module - Pass dimensions directly to embedding model constructor instead of using parameters - Update session state file paths to use mem_session directory instead of resource - Add mem_session_dir configuration option to application config schema - Update workspace directory creation to include new mem_session directory - Change AgentScope and Claude Code session paths to use mem_session directory - Move embedding dimensions from parameters to top-level configuration - Update AgentScope dependency version from 2.0.3 to 2.0.4 - Update integration tests to reflect new session file location paths * chore(version): bump version to 0.4.0.8 - Update __version__ from 0.4.0.7 to 0.4.0.8 in __init__.py	2026-07-08 12:30:46 +09:00
jinliyl	10da205797	feat(benchmark): add lme benchmark steps (#326) ... * refactor(search): replace time module with datetime for timestamp generation - Removed unused time import - Added static method _now_ts using datetime.timestamp - Updated clock parameter to use _now_ts method instead of time.time - Maintained same timestamp precision and functionality * test(http): add tests for HTTP client display formatting - Add test for default metadata hiding behavior in CLI output - Add test for metadata display when show_metadata is enabled - Verify _format_for_display method correctly formats response text - Test both success case and metadata inclusion scenarios * chore(build): remove longmemeval from gitignore - Removed longmemeval directory from gitignore list - Kept evaluation and datasets directories in ignore list - Updated gitignore configuration for proper version control	2026-07-07 18:53:39 +09:00
Sen Huang	0a7eea18f8	fix(as_embedding): support both agentscope 2.0.2 and 2.0.3 (#323) ... 2.0.3 promoted `dimensions` to a required first-class constructor argument while keeping a backfill from `parameters.dimensions`; 2.0.2 has no such argument and reads `dimensions` from `Parameters`. Keep `dimensions` in `Parameters` for both versions and, when the model constructor accepts `dimensions`, pass `dimensions=None` so 2.0.3's backfill promotes it out of `parameters`. Co-authored-by: Claude Fable 5 <noreply@anthropic.com>	2026-07-06 19:03:32 +08:00
jinliyl	7369342115	feat(search): add tool context deduplication and improve search configuration (#321) ... * feat(search): add tool context deduplication and improve search configuration - Modify _make_tool methods to accept and inject tool_context_id parameter - Add tool_context_id handling in AS and CC agent wrappers - Increase search candidate multiplier from 3.0 to 5.0 in default config - Extend HTTP client timeout from 30s to 3600s - Add tool context deduplication logic to prevent duplicate search results - Implement TTL-based expiration for seen chunks in tool contexts - Add comprehensive unit tests for tool context deduplication behavior - Update .gitignore to exclude longmemeval directory - Add time import for timestamp functionality in search step * refactor(search): replace time module with datetime for timestamp generation - Removed unused time import - Added static method _now_ts using datetime.timestamp - Updated clock parameter to use _now_ts method instead of time.time - Maintained same timestamp precision and functionality	2026-07-06 16:18:39 +09:00
xyf2020	43a407bc4f	feat: add start_date/end_date time filter support for search job (#317) ... * feat: add start_date/end_date time filter support for search job - Add _extract_date_from_path to extract validated YYYY-MM-DD from chunk paths - Add start_date/end_date filtering in _matches_search_filter - Implement progressive recall in FaissLocalFileStore.vector_search - Promote start_date/end_date from context to search_filter in SearchStep - Add start_date/end_date parameters to search job in default.yaml - Add unit tests for date filter functionality * fix: validate/normalize date filters and harden _extract_date_from_path Address three code-review comments on the time_filter search feature: 1. Validate/normalize start_date and end_date before string comparison. _matches_search_filter does lexicographic comparison against path_date (always canonical YYYY-MM-DD). Raw caller values like '2026-2-28' or 'abc' would produce silently wrong results. Now SearchStep normalizes valid dates via extract_daily_date (with strptime fallback for non-zero-padded input) and silently ignores invalid dates with a logger.warning, removing them from the filter. 2. Clarify behavior for paths without embedded dates. Added optional strict_date_filter parameter (default False). When True and at least one date bound is active, chunks whose path yields no date (e.g. digest/personal/topic.md) are excluded. When False (default), the existing behavior is preserved — dateless paths pass through. 3. Harden _extract_date_from_path against non-standard suffixes. Previously parts[1].split('.')[0] accepted '2026-05-18.anything' as a valid date. Now only exact 'YYYY-MM-DD' (dir) and 'YYYY-MM-DD.md' (day-index) forms are accepted.	2026-07-03 15:58:04 +08:00
Sen Huang	8877743ca9	feat(cli): route bare commands to the running server's real config (#312) ... call_server now resolves the client backend/transport/host/port from the live `reme start` process (replaying its start args through resolve_app_config) so a bare `reme <action>` reaches the server however it was actually launched, falling back to local config when none runs. Explicit backend=/transport=/host=/port= still win. Also fix as_embedding to pass `dimensions` explicitly for agentscope >=2.0.2, and add Claude Code auto-memory/auto-dream demos to the READMEs.	2026-07-01 17:15:48 +08:00
Sen Huang	3dee10d4f9	feat: add Claude Code plugin with auto-memory functionality (#297) ... * feat: add Claude Code plugin with auto-memory functionality * refactor(auto_memory): fix spacing in json parsing logic	2026-06-26 14:46:42 +08:00
jinliyl	ad7893e9c4	fix(mcp): resolve circular import issues and update dependencies (#296) ... * fix(mcp): resolve circular import issues and update dependencies - Moved fastmcp imports inside functions to prevent circular dependencies - Replaced _TRANSPORT_MAP with _VALID_TRANSPORTS set for transport validation - Updated version number from 0.4.0.3 to 0.4.0.4 - Added claude-agent-sdk dependency to core optional dependencies - Used TYPE_CHECKING imports for FastMCP related types - Restructured transport mapping logic within function scope - Fixed string annotation for CallToolResult type hints * refactor(tests): update date handling in daily steps tests - Replace _date.today() with timezone-aware now function - Use Asia/Shanghai timezone for date formatting - Change return format to use strftime instead of isoformat - Import now function from reme.steps.evolve module * refactor(tests): clean up unused imports in daily steps test - Removed unused date import from datetime module - Removed redundant pathlib Path import that was already imported later - Kept necessary imports for asyncio, os, tempfile, warnings, and frontmatter modules * test(daily_steps): update test to include application context for daily list step - Add ApplicationContext initialization with temporary workspace directory - Register file store component in application context - Pass application context to DailyListStep constructor - Maintain existing test assertion behavior for date metadata verification	2026-06-26 09:37:08 +08:00
jinliyl	afe12b16db	feat(file_store): add embedding backfill for persisted chunks (#292) ... - Implement _backfill_missing_embeddings method to handle chunks without embeddings - Add logic to identify and process chunks that predate embedding feature - Integrate backfill process into store loading sequence - Add proper error handling and logging for backfill operations - Create unit test for embedding backfill functionality - Ensure backfilled embeddings are properly persisted to storage	2026-06-24 17:32:21 +08:00
jinliyl	7d86658f33	Refactor logging levels and add dream schema definitions (#291) ... * chore(logging): change info logs to debug level for data loading operations - Changed stopwords loading log from info to debug level - Changed file catalog nodes loading log from info to debug level - Changed file graph nodes loading log from info to debug level * feat(dream): add dream schema definitions and enum for auto-dream functionality - Add DreamBucketEnum with procedure, personal, and wiki values - Create comprehensive dream-related Pydantic models including DreamUnit, DreamTopic, DreamExtractOutput, IntegrateOutcome, TopicSelectionOutput, ProactiveResult, and DreamState - Move schema definitions from local step module to shared schema package - Update dream extraction and integration steps to use new enum-based bucket validation - Initialize digest directories for each dream bucket type - Enhance embedding store health check with workspace directory logging * refactor(tests): update DreamState import path in test_auto_dream.py - Move DreamState import from reme.steps.evolve.dream.schema to reme.schema - Maintain same functionality with updated module reference - Align import with new schema location in project structure	2026-06-24 16:44:03 +08:00
jinliyl	a3bd81bde2	Update version to 0.4.0.2 and improve tokenizer index handling (#290) ... * fix(core): update version number to 0.4.0.1 - Incremented version from 0.4.0.0 to 0.4.0.1 in __init__.py * fix(index): remove stopwords path from tokenizer config and add keyword index repair - Remove stopwords_path from tokenizer config to prevent index forking by install path - Add _sync_keyword_index_from_chunks method to repair keyword index when persisted state mismatches - Implement test for keyword index repair from persisted chunks when missing - Add test to verify tokenizer fingerprint ignores stopwords absolute path - Update version from 0.4.0.1 to 0.4.0.2 * feat(dream): add scan_days parameter to dream extraction process - Add scan_days configuration option to default.yaml with default value of 2 - Implement recent_dates utility function to calculate date ranges for scanning - Modify DreamExtractStep to scan multiple days based on scan_days parameter - Update dream extraction to process files across multiple dates instead of single day - Extend DreamState schema to include dates and scan_days fields - Update DreamTopicsStep to handle multi-day topic processing - Modify finish step to checkpoint files from all scanned dates - Add comprehensive tests for multi-day scanning functionality - Update prompt templates to include scan dates information - Refactor topics writing logic to target specific date rather than current date	2026-06-24 15:01:07 +08:00
Sen Huang	e31db5fe19	docs: rename vault_dir to workspace_dir in documentation and examples (#286) ... * docs: rename vault_dir to workspace_dir in documentation and examples * refactor(extract): format long method call across multiple lines * refactor(extract): format system prompt parameters for better readability	2026-06-22 16:58:57 +08:00
jinliyl	206a53e5ed	init: reme version 0.4.0 (#284)	2026-06-22 15:41:19 +08:00