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Two HIGH findings from the Codex adversarial review on
feat/group-include-extractor:
1. Default-on extraction silently changes existing groups (BLOCKER)
DEFAULT_DETECT.includes was true, so any pre-existing group.yaml
that omits the new field would gain a wave of include::* contracts
on the next sync after upgrade. Flipped to false (opt-in). The
integration test already declares includes: true explicitly so it
survives unchanged; the unit extractor tests bypass parseGroupConfig
entirely; the sync test uses extractorOverride. Only config-parser
needed regression tests covering omitted/explicit/false variants.
2. IncludeExtractor scans outside the indexed file universe (BLOCKER)
The extractor was running glob('**/*', { ignore: STANDARD_IGNORES })
twice with a hand-rolled 9-pattern list, no .gitignore/.gitnexusignore
honoring, and no max-file-size cap. That meant File:<path> contracts
could appear for files ingestion would never index, producing
cross-links group impact cannot fan out to (silent false-negatives).
Refactored to a single discoverIndexableFiles() helper that mirrors
walkRepositoryPaths exactly: createIgnoreFilter + getMaxFileSizeBytes,
one discovery pass shared by provider and consumer paths. Dropped
STANDARD_IGNORES and SOURCE_GLOB entirely.
third_party and 3rdparty (the C/C++ vendored-deps conventions) were
in the local ignore list but not in the canonical DEFAULT_IGNORE_LIST
used by ingestion. Folded both into the canonical set rather than
keep a parallel list — the whole point of the Codex finding is that
two file-discovery implementations drift. Single source of truth.
Tests: 5 new regression tests for the discovery alignment (.gitignore,
.gitnexusignore, max-file-size on both provider and consumer paths)
plus 4 for the opt-in default. All 30 include-extractor tests + the
494-test group suite + ignore-service tests pass.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
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