Copilot fe7608988f fix(mcp): context resource reads stale lastCommit/stats after out-of-process analyze (#2438) (#2439) ... * Initial plan * fix(mcp): read fresh metadata from disk in context resource to fix stale staleness banner and stats (#2438) The context resource (gitnexus://repo/{name}/context) was serving stale lastCommit and stats after an out-of-process `analyze --index-only` refresh. The LocalBackend's in-memory RepoHandle is cached and only refreshes on registry misses — never on a disk update from an external process. Fix: read fresh metadata via loadMeta(repo.storagePath) on every context resource read, mirroring the ensureInitialized hot-swap pattern. Use the fresh lastCommit for the staleness check and fresh stats for the stats block; fall back to cached values when the disk read fails. Tests: - 5 new unit tests in resources.test.ts covering fresh meta, fallback behavior - 3 new integration tests in context-resource-staleness.test.ts covering the exact reproduce sequence from the issue report * fix(test): use @ladybugdb/core mock to prevent native addon load in integration test The context-resource-staleness integration test used importOriginal() in the vi.mock factories for pool-adapter.js and mcp/core/lbug-adapter.js. That caused the real pool-adapter.ts to load @ladybugdb/core, which tries to dlopen lbugjs.node — a native addon that requires postinstall (not run with --ignore-scripts in CI). Fix: - Add a vi.mock('@ladybugdb/core') at the package boundary, matching the pattern in lbug-pool-fts-load.test.ts and pool-wal-recovery.test.ts. - Replace the two importOriginal()-based lbug mocks with direct factories that provide all necessary exports (initLbug, executeQuery, executeParameterized, closeLbug, isLbugReady) without loading the real module. All 3 integration tests now pass in CI (no lbugjs.node required). * test(integration): run context staleness flow end-to-end without mocks * Address PR review feedback (#2439) - Restore libc selectors for optional native packages --------- Co-authored-by: copilot-swe-agent[bot] <198982749+Copilot@users.noreply.github.com> Co-authored-by: Gergő Magyar <gergomagyar@icloud.com>		2026-07-16 09:20:18 +01:00
..
cfg	feat(impact): opt-in PDG-backed impact mode - statement + inter-procedural slicing, resolved-callee-id soundness, mutation-oracle validated (#2227)	2026-06-20 12:04:32 +01:00
cli
group	fix(ci): shard platform-sensitive matrix + spawn built CLI to fix Windows cross-platform timeout (#2394)	2026-07-08 09:09:11 +01:00
mcp	feat(mcp): paginate list_repos to avoid client token truncation (#2119) (#2120)	2026-06-09 19:59:54 +01:00
optional-grammars	feat(install): toolchain-free tree-sitter via vendored prebuilds (#2113)	2026-06-09 18:16:24 +01:00
resolvers	fix(lbug/mcp): exact symbol content + 0-based line storage with 1-based MCP display (#2377, #2379) (#2380)	2026-07-06 16:16:45 +01:00
analyze-embedding-flags-e2e.test.ts	fix(ci): shard platform-sensitive matrix + spawn built CLI to fix Windows cross-platform timeout (#2394)	2026-07-08 09:09:11 +01:00
analyze-heap-oom-e2e.test.ts
analyze-wal-checkpoint-failure.test.ts	fix(ci): shard platform-sensitive matrix + spawn built CLI to fix Windows cross-platform timeout (#2394)	2026-07-08 09:09:11 +01:00
antigravity-hook-e2e.test.ts	fix(hook): emit MCP query hint when server owns DB lock (#2396) (#2397)	2026-07-08 18:34:05 +01:00
api-impact-e2e.test.ts
api-impact-method-e2e.test.ts	fix(mcp): stabilize api_impact response shape for same-URL multi-verb routes (#2308) (#2309)	2026-06-26 19:50:10 +01:00
api-query.test.ts
ast-helpers-object-literal-binding.test.ts
augmentation.test.ts
basicblock-roundtrip.test.ts	feat(pdg): control dependence — post-dominators + CDG (Ferrante) [M5 #2085] (#2188)	2026-06-13 18:49:03 +01:00
c-cpp-typedef-legacy-parse.test.ts
class-impact-all-languages.test.ts
cli-e2e.test.ts	fix: surface incremental dirty state diagnostics (#2410)	2026-07-09 13:28:26 +01:00
cli-limit-e2e.test.ts	fix(ci): shard platform-sensitive matrix + spawn built CLI to fix Windows cross-platform timeout (#2394)	2026-07-08 09:09:11 +01:00
cobol-pipeline-benchmark.test.ts
context-resource-staleness.test.ts	fix(mcp): context resource reads stale lastCommit/stats after out-of-process analyze (#2438) (#2439)	2026-07-16 09:20:18 +01:00
context-typed-property.test.ts
copy-parallel-invariant.test.ts	perf(lbug): overlap node COPY with relationship emit (#2203) (#2226)	2026-06-16 10:57:26 +01:00
cpp-adl-benchmark.test.ts
cpp-captures-typeclass-benchmark.test.ts	fix: stop Napi::Error SIGABRT on analyze — index C++ type lookups, terminate workers only at JS-safe points (#2432) (#2436)	2026-07-11 18:07:08 +01:00
cpp-pipeline-benchmark.test.ts
cross-file-binding.test.ts
csharp-pipeline-benchmark.test.ts
csharp-scope-capture-tripwire.test.ts
csv-pipeline.test.ts	fix(lbug/mcp): exact symbol content + 0-based line storage with 1-based MCP display (#2377, #2379) (#2380)	2026-07-06 16:16:45 +01:00
django-route-extraction-e2e.test.ts	feat(group): Support Django route extraction for multi-repo (#1836)	2026-06-21 20:11:30 +01:00
doc-comment-description-e2e.test.ts	feat(ingestion): make doc comments searchable across all languages (#2286)	2026-06-24 08:36:55 +01:00
enrichment.test.ts
expo-routes.test.ts
extension-binary-real.test.ts	fix(fts): diagnose Windows FTS missing-dependency load failures (#2374, Phase 1) (#2383)	2026-07-06 21:27:37 +01:00
fastapi-composed-route-constants.test.ts	fix: resolve imported/composed FastAPI route path constants (#2391) (#2393)	2026-07-07 13:23:05 +01:00
fastapi-prefix-pipeline.test.ts	fix(fastapi): apply APIRouter constructor prefixes (#2312)	2026-06-28 13:37:31 +01:00
filesystem-walker.test.ts
fts-cjk-segmentation-search.test.ts	feat(search): add opt-in CJK bigram segmentation for FTS search (#2339)	2026-07-01 16:41:41 +01:00
fts-description-search.test.ts	fix(search): index description field for FTS so doc comments are keyword-searchable (#2300)	2026-06-25 14:21:44 +01:00
fts-extension-e2e.test.ts	feat: gate Icebug community engine prototype (#2376)	2026-07-09 05:43:49 +01:00
fts-fullfile-search.test.ts	fix(indexing): keep full text file content searchable (#2323)	2026-07-01 08:27:09 +01:00
fts-stemmer-sweep.test.ts	fix(deps): pin Ladybug 0.18.0, validate the multi-writer deadlock fix (#2340)	2026-07-01 18:35:57 +01:00
go-multi-name-worker-metadata.test.ts
go-pipeline-benchmark.test.ts
grammar-introspection.test.ts
grammar-literal-validation.test.ts
has-method.test.ts
hooks-e2e.test.ts
http-inline-handler-symbol-roundtrip.test.ts	fix(test): stabilize local Windows gate baselines (#2314)	2026-06-29 22:27:50 +01:00
ignore-and-skip-e2e.test.ts
impact-ambiguous-blast-radius.test.ts	fix: stop impact()/route_map under-reporting blast radius (#2129, #1858, #1589/#1852) (#2136)	2026-06-10 11:25:48 +01:00
impact-epistemic-lower-bound.test.ts	fix: stop impact()/route_map under-reporting blast radius (#2129, #1858, #1589/#1852) (#2136)	2026-06-10 11:25:48 +01:00
impact-pdg-callsummary-degradation.test.ts	fix(lbug/mcp): exact symbol content + 0-based line storage with 1-based MCP display (#2377, #2379) (#2380)	2026-07-06 16:16:45 +01:00
impact-pdg-degradation.test.ts	fix(storage): rename index metadata to gitnexus.json with dual-write compatibility (#2363)	2026-07-03 19:32:59 +01:00
impact-pdg-e2e.test.ts	feat(impact): opt-in PDG-backed impact mode - statement + inter-procedural slicing, resolved-callee-id soundness, mutation-oracle validated (#2227)	2026-06-20 12:04:32 +01:00
impact-pdg-fixtures.test.ts	feat(impact): opt-in PDG-backed impact mode - statement + inter-procedural slicing, resolved-callee-id soundness, mutation-oracle validated (#2227)	2026-06-20 12:04:32 +01:00
impact-pdg-fullchain-e2e.test.ts	feat(impact): opt-in PDG-backed impact mode - statement + inter-procedural slicing, resolved-callee-id soundness, mutation-oracle validated (#2227)	2026-06-20 12:04:32 +01:00
impact-pdg-id-degradation.test.ts	fix(storage): rename index metadata to gitnexus.json with dual-write compatibility (#2363)	2026-07-03 19:32:59 +01:00
impact-pdg-interproc.test.ts	feat(impact): opt-in PDG-backed impact mode - statement + inter-procedural slicing, resolved-callee-id soundness, mutation-oracle validated (#2227)	2026-06-20 12:04:32 +01:00
impact-pdg-shape.test.ts	feat(impact): opt-in PDG-backed impact mode - statement + inter-procedural slicing, resolved-callee-id soundness, mutation-oracle validated (#2227)	2026-06-20 12:04:32 +01:00
impact-pdg-statement-precise.test.ts	feat(impact): opt-in PDG-backed impact mode - statement + inter-procedural slicing, resolved-callee-id soundness, mutation-oracle validated (#2227)	2026-06-20 12:04:32 +01:00
impact-pdg-traversal.test.ts	feat(impact): opt-in PDG-backed impact mode - statement + inter-procedural slicing, resolved-callee-id soundness, mutation-oracle validated (#2227)	2026-06-20 12:04:32 +01:00
java-class-impact.test.ts
js-array-method-callback-attribution.test.ts
lbug-close-handle-release.test.ts
lbug-conn-serialization.test.ts	fix(lbug): stop --pdg analyze double-free (skip LadybugDB close-destructor crash) + harden connection serialization (#2264)	2026-06-21 15:25:56 +01:00
lbug-core-adapter.test.ts	fix: make large incremental writebacks commit reliably (#2409) (#2425)	2026-07-10 14:05:23 +01:00
lbug-delete-nodes-for-files.test.ts	fix: make large incremental writebacks commit reliably (#2409) (#2425)	2026-07-10 14:05:23 +01:00
lbug-load-overlap-errors.test.ts	perf(lbug): overlap node COPY with relationship emit (#2203) (#2226)	2026-06-16 10:57:26 +01:00
lbug-load-overlap.test.ts	fix(indexing): keep full text file content searchable (#2323)	2026-07-01 08:27:09 +01:00
lbug-load-prof.test.ts	perf(lbug): overlap node COPY with relationship emit (#2203) (#2226)	2026-06-16 10:57:26 +01:00
lbug-lock-retry.test.ts	fix(lbug): retry single-writer transaction contention (#2342)	2026-07-02 06:17:12 +01:00
lbug-multiwriter-deadlock.test.ts	feat: gate Icebug community engine prototype (#2376)	2026-07-09 05:43:49 +01:00
lbug-non-ascii-path.test.ts
lbug-open-retry.test.ts
lbug-orphan-sidecar-recovery.test.ts
lbug-pool-stability.test.ts
lbug-pool.test.ts	fix(parse): correct worker-pool docs drift + surface worker-side stack on crash (#2068) (#2070)	2026-06-08 07:20:12 +01:00
lbug-query-importers-batch.test.ts	fix: make large incremental writebacks commit reliably (#2409) (#2425)	2026-07-10 14:05:23 +01:00
lbug-readonly-init.test.ts
lbug-vector-extension.test.ts	fix(embeddings): create VECTOR index via conn.query, not the prepared path (#2114)	2026-06-10 07:59:37 +01:00
literal-collectors.test.ts	fix(test): stabilize local Windows gate baselines (#2314)	2026-06-29 22:27:50 +01:00
local-backend-calltool.test.ts	fix(storage): rename index metadata to gitnexus.json with dual-write compatibility (#2363)	2026-07-03 19:32:59 +01:00
local-backend.test.ts
local-symbol-pruner-pipeline.test.ts	perf(ingestion): prune inert local value symbols (#2065)	2026-06-07 14:47:51 +01:00
markdown-processor-crlf.test.ts	fix(lbug/mcp): exact symbol content + 0-based line storage with 1-based MCP display (#2377, #2379) (#2380)	2026-07-06 16:16:45 +01:00
mcp-line-display.test.ts	fix(lbug/mcp): exact symbol content + 0-based line storage with 1-based MCP display (#2377, #2379) (#2380)	2026-07-06 16:16:45 +01:00
multi-branch-analyze.test.ts	feat: flat workspace index follows the checked-out branch (#2364)	2026-07-03 20:55:27 +01:00
multi-verb-route-identity.test.ts	feat(ingestion/routes): give Route nodes a (method, url) identity (#2289) (#2302)	2026-06-26 07:59:46 +01:00
object-literal-method-exports.test.ts
object-literal-owner-resolution.test.ts
orm-dataflow.test.ts
parse-impl-chunk-concurrency.test.ts
parse-impl-clone-skip.test.ts	fix(parse): survive non-cloneable worker results so large-repo analyze doesn't crash (#2112) (#2135)	2026-06-10 13:47:22 +01:00
parse-impl-env-reads.test.ts
parse-impl-large-fixture.test.ts
parse-impl-progress-monotonic.test.ts
parse-impl-quarantine-cache-skip.test.ts
parsing.test.ts
pdg-emit-streaming-roundtrip.test.ts	perf(lbug): overlap node COPY with relationship emit (#2203) (#2226)	2026-06-16 10:57:26 +01:00
pdg-query.test.ts	fix(lbug/mcp): exact symbol content + 0-based line storage with 1-based MCP display (#2377, #2379) (#2380)	2026-07-06 16:16:45 +01:00
php-pipeline-benchmark.test.ts
php-scope-capture-tripwire.test.ts
pipeline-graph-golden.test.ts
pipeline.test.ts
python-import-index-reuse.test.ts
python-scope-capture-tripwire.test.ts
qualified-class-lookups.test.ts
query-compilation.test.ts
route-handler-symbol-roundtrip.test.ts	feat(ingestion/routes): give Route nodes a (method, url) identity (#2289) (#2302)	2026-06-26 07:59:46 +01:00
route-method-roundtrip.test.ts	feat(ingestion/routes): give Route nodes a (method, url) identity (#2289) (#2302)	2026-06-26 07:59:46 +01:00
route-parse-skip.test.ts	fix(ingestion/routes): recognise Spring method-level array-form route mappings (#2281)	2026-06-24 07:10:37 +01:00
ruby-pipeline-benchmark.test.ts
ruby-scope-capture-tripwire.test.ts
run-analyze-adopt-failure.test.ts	feat: flat workspace index follows the checked-out branch (#2364)	2026-07-03 20:55:27 +01:00
rust-pipeline-benchmark.test.ts
rust-scope-capture-tripwire.test.ts
search-core.test.ts
search-pool.test.ts
server-analyze-token-validation.test.ts	feat(analyze): private GitHub repos via PAT + Azure DevOps Server support (#2076, #2210) (#2223)	2026-06-16 05:49:02 +01:00
server-analyze.test.ts
server-http-startup.test.ts
setup-antigravity.test.ts
setup-skills.test.ts
setup-uninstall-roundtrip.test.ts	feat(setup): add CodeBuddy and Qoder coding-agent integrations (#2368)	2026-07-04 10:54:50 +01:00
shape-check-regression.test.ts
skills-e2e.test.ts	fix(cli): make Claude skills discoverable (#2434)	2026-07-15 20:40:20 +05:00
spring-di-pipeline.test.ts	feat: add Spring DI resolver for @Autowired List<T> injection (#2200)	2026-07-02 17:49:46 +01:00
spring-inheritance-benchmark.test.ts	fix(ingestion/routes): resolve Spring interface-inherited routes (#2288) (#2290)	2026-06-25 09:22:20 +01:00
spring-interface-inheritance-pipeline.test.ts	fix(ingestion/routes): resolve Spring interface-inherited routes (#2288) (#2290)	2026-06-25 09:22:20 +01:00
spring-route-pipeline.test.ts	perf(group/http): skip source parse for graph-covered route files (#2138 Part 2) (#2265)	2026-06-23 07:22:43 +01:00
staleness-and-stability.test.ts	fix(storage): rename index metadata to gitnexus.json with dual-write compatibility (#2363)	2026-07-03 19:32:59 +01:00
swift-scope-capture-tripwire.test.ts
taint-explain.test.ts	feat(pdg): control dependence — post-dominators + CDG (Ferrante) [M5 #2085] (#2188)	2026-06-13 18:49:03 +01:00
tree-sitter-languages.test.ts	feat(cpp): parse CUDA source extensions (#2213)	2026-06-16 07:32:53 +01:00
typescript-async-generator-functions.test.ts	fix(ingestion): index generator function declarations (#2305)	2026-06-26 13:37:02 +01:00
vue-pipeline-benchmark.test.ts
worker-pool.test.ts	fix(tree-sitter): recover declarations after embedded NUL bytes (#2430)	2026-07-11 08:33:50 +01:00