GitNexus/eval/workflow_bench
Gergő Magyar 0ce7880290
fix(scope-resolution): a closure binding is a call SOURCE in every language, and function-local values carry their own identity (closes #2699) (#2718)
* test(scope-resolution): audit the consumers of file-scoped node ids (#2699 part A)

#2699 item 4 — "audit consumers that assume file-scoped ids" — after #2695/#2714
gave function-local CALLABLES position-bearing ids. Tests and findings only; no
production change. That split is deliberate: `impact` reports
`resolveDefGraphId` at CRITICAL with 23 DIRECT dependents across 7 modules
(every language MRO builder, both Spring attachers, C++ member lookup,
tryEmitEdge, emitReferencesViaLookup, buildGraphTargetIndex, emitFreeCallFallback,
emitReceiverBoundCalls, preEmitInheritanceEdges, emitDetectedInterfaceImplementations,
phpEmitUnresolvedReceiverEdges, emitRubyMixinEdges, emitRustTraitImplEdges,
emitDartHeritageEdges), so changing that key chain is its own change, not a
rider on an audit.

A2 — detect_changes: CONCERN RESOLVED, now pinned. The worry was that an id
containing `@row:col` re-keys whenever a declaration MOVES, making every edit
look like symbol churn. It cannot: `local-backend.ts` maps diff hunks to
symbols by LINE-RANGE OVERLAP (`n.startLine`/`n.endLine`) and merely REPORTS
`n.id`. Node identity never participates in the match. New structural test
asserts the WHERE clause never gains `n.id =` or `n.id IN`, keeps the one
legitimate id-shaped predicate (the `BasicBlock:` prefix exclusion, #2082 U7),
and confirms the id is returned rather than matched. Structural in the same
idiom as `detect-changes-worktree.test.ts`, and labelled as not proving runtime
behaviour.

A1 — ANSWERED, and the answer is that #2699 is NOT fully closed by items 1-3.
The fail-closed guard is gated on `isOverloadableCallable`
(Function | Method | Constructor), so a function-local VALUE never reaches it.
Measured on a fixture: a top-level `const handler` and a function-local
`const handler` still produce ONE node, `Const:v.ts:handler`. That is the
residual half of the issue's original complaint. Pinned as a KNOWN LIMIT with
its reason (widening identity to values re-keys ~14,700 build-time nodes to
change ~800 persisted ones — the decision recorded in `parse-worker.ts`), and
deliberately NOT fixed here.

A3 — id-persisting consumers, classified:
  - detect_changes ................ SAFE (position-keyed; pinned by A2)
  - MCP impact/context/trace ...... SAFE (resolve by name/uid at query time)
  - bench fingerprints ............ SAFE (digest capture shape, not node ids)
  - rust-captures golden .......... SAFE (digests captures, not ids)
  - cfg pipeline-pdg snapshot ..... AT RISK by design — pins exact edge ids, so
    it trips whenever attribution changes. That is the gate working; #2714
    already exercised it.
  - wiki / group-contract links ... NOT id-keyed on locals (locals are never
    cross-file addressable, per the document-scoped contract of item 2).

Verified: tsc clean; 14/14 across the two touched files; `detect_changes`
reports 0 changed symbols (tests only).

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_0184RmD24KFJidYqpM7v3XjR

* fix(php): a closure binding is a call SOURCE, not only a TARGET (#2699 part B, S1)

A call made inside a closure binding was attributed to the ENCLOSING scope, so
the closure was a call TARGET but never a call SOURCE: impact(handler,
direction:"downstream") reported nothing even though the closure calls out.

Root cause, probe-measured rather than inferred. Instrumenting
pickCallerCallableDef (graph-bridge/ids.ts) to log every rejection reason shows
the closure's own scope EXISTS and its range DOES contain the call site, but its
ownedDefs is EMPTY, so the ":94" owned-callable filter drops it and attribution
falls through to the ":97" enclosing-scope fallback.

The reason is one missing query rule. javascript/query.ts pairs the binding name
with the closure via @declaration.function anchored on the INNER arrow node, so
anchor.range equals the @scope.function range and pass2AttachDeclarations
attaches the declaration to the CLOSURE's scope. No other language had that
rule — PHP, Rust, Kotlin, Ruby and Dart all captured named function
declarations only. That single omission is the entire empty-ownedDefs cause.

This ports the rule to PHP with the same anchor discipline (@declaration.function
on the inner anonymous_function / arrow_function, NOT on the
assignment_expression wrapper). PHP needs nothing else: it already declares
(anonymous_function) and (arrow_function) as @scope.function, so the rule alone
completes it.

Measured on a fixture: `$handler = function ($x) { return target($x); }` inside
outer() now emits

  Function:src/a.php:outer.$handler@3:2 -> Function:src/a.php:target

where it previously emitted `outer -> target`.

The pinned test in closure-binding-labels.test.ts asserted the OLD, wrong
behaviour by design ("to catch that asymmetry changing in EITHER direction"), so
it is INVERTED here rather than deleted, per its own instruction. Its block
comment is corrected to record the measured root cause, including that Kotlin
and Ruby will need BOTH this rule AND a relaxed kind gate (their lambda_literal
/ do_block is @scope.block deliberately, #1757), and that Dart has no closure
scope at all.

Verification: closure-binding-labels 50/50; PHP resolver suites 221/221
(php, php-coverage, php-response-shapes). detect_changes {staged}: 1 changed
symbol (PHP_SCOPE_QUERY), 0 affected processes, risk LOW.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_0184RmD24KFJidYqpM7v3XjR

* fix(rust): emit a node for a closure binding and make it a call SOURCE (#2699 part B, S3)

Rust was the one exception to #2687's "a closure bound to a name is a Function
node in every language": `let handler = || target(1);` produced NO graph node at
all, so the closure could be neither a call target nor a call source.

Needed BOTH query channels, which is the finding worth recording. Porting only
the scope-resolution rule (as S1 did for PHP) changed nothing measurable here,
because there was no node to attribute anything to:

  - languages/rust/query.ts — closure-binding declaration, @declaration.function
    on the INNER closure_expression so anchor.range aligns with the existing
    (closure_expression) @scope.function. This is what gives the closure's own
    scope a callable in ownedDefs, which is what stops pickCallerCallableDef
    falling through to the enclosing fn.
  - tree-sitter-queries.ts — @definition.function on the OUTER let_declaration.
    This emits the Function NODE that Rust never had.

Note the deliberate anchor asymmetry between the two channels: the graph-node
channel anchors the WRAPPER (matching the existing
(lexical_declaration (variable_declarator ... (arrow_function))) rule), while
the scope-resolution channel anchors the INNER closure (to align with
@scope.function). Getting these backwards silently produces either no node or
an unattributable one, so both sites carry a comment saying so.

Measured on a fixture — `let handler = || target(1);` inside outer():

  Function:src/a.rs:outer                CALLS  Function:src/a.rs:outer.handler@2:4
  Function:src/a.rs:outer.handler@2:4    CALLS  Function:src/a.rs:target

Previously the whole binding was absent and the call read as `outer -> target`.
The rule also covers `move` closures: the closure_expression node spans the
`move` keyword.

Verification: closure-binding-labels 50/50; rust.test.ts 192/192;
rust-coverage, rust-f70, rust-scope all pass; rust-captures-golden passes
UNCHANGED, so no golden regeneration was required. detect_changes {staged}:
2 changed symbols (RUST_SCOPE_QUERY, RUST_QUERIES), 0 affected processes,
risk LOW.

One caveat on the suite runs: this host times out `beforeAll` hooks at the
default 60s under load — rust.test.ts needed --hookTimeout=600000 to complete,
and a concurrent second vitest run starves worker startup entirely (every test
fails at ~5001ms). Both are host artifacts, not signal.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_0184RmD24KFJidYqpM7v3XjR

* fix(kotlin,ruby): a closure binding is a call SOURCE, via a Block-scope callable boundary (#2699 part B, S2)

Kotlin and Ruby anchor a closure on a Block-kind scope — Kotlin lambda_literal
and Ruby do_block/block are @scope.block DELIBERATELY (#1757 smart casts), so
they must not be re-kinded. pickCallerCallableDef gated its child-scope walk on
kind === 'Function', so a closure there could never become a call SOURCE.

Both halves are required; neither alone changes anything:

1. kotlin/query.ts and ruby/query.ts gain the closure-binding declaration rule,
   with @declaration.function on the INNER lambda_literal / block so its range
   aligns with the @scope.block range (the anchor discipline documented in
   javascript/query.ts). Without this the closure scope owns no callable def.

2. pickCallerCallableDef accepts a Block-kind child as a callable boundary when
   the scope IS that callable's body. Without this the kind gate still rejects.

The alignment test in (2) is the part worth scrutiny. Relaxing the kind gate to
accept ANY Block owning a callable would be a real regression: a nested
`fun foo()` declared inside a block is owned by that block, so a call made at
BLOCK level — outside foo — would be misattributed to foo. Comparing the def's
declaration position against the scope's start position discriminates them: for
a closure the declaration and the scope sit on the SAME node, so the positions
match; for a nested function the block starts at `{` while the def starts at the
declaration, so they do not. Existing Function-kind behaviour is untouched, so
every already-working language is unaffected by construction.

The comparison is base-safe: scope-extractor.ts builds a def id as
`def:<filePath>#<startLine>:<startCol>:<type>:<name>` from the same Range a
scope carries, so both sides share one coordinate base. This is called out in
the helper's docblock because `defStartLine` nearby documents its own output as
1-based, which invites a wrong "fix" (#2377 is exactly this class of hazard).

Ruby's call forms are restricted to lambda/proc by name: an unrestricted
(call block: (block)) would match ANY method call taking a block, so
`mapped = items.map { |i| ... }` would wrongly declare `mapped` a callable.
Verified against the parser: 3 matches (->, lambda, proc), map excluded.
Separate #eq? patterns rather than one #match? alternation, which is a known
hazard on this tree-sitter line.

Measured on fixtures:

  Kotlin  Function:src/A.kt:outer.handler@2:4  CALLS  Function:src/A.kt:target
  Ruby    Function:src/a.rb:outer.handler@4:2  CALLS  Method:src/a.rb:target#1

previously `outer -> target` and `outer#0 -> target#1`.

The pinned Kotlin test asserted the old behaviour by design and is INVERTED, not
deleted. Ruby had NO pinned case, so a new one is added rather than inverted.
The describe title no longer claimed something false ("not yet a call SOURCE"
now holds only for Dart) and was retitled.

Verification: closure-binding-labels 51/51; kotlin.test.ts, kotlin-coverage,
ruby.test.ts, ruby-scope, ruby-namespaced all pass (478 passed / 1 expected
inversion before the test was flipped). impact on pickCallerCallableDef:
CRITICAL, 191 impacted, ONE d=1 (resolveCallerGraphId) — the return contract is
unchanged, so that dependent is unaffected. detect_changes {staged}: 5 changed
symbols, 2 affected processes (both EmitReferencesViaLookup, one of them the new
ScopeIsCallableBody step), risk medium.

Dart remains the last failing language: dart/query.ts declares no
@scope.function at all, and dart/captures.ts synthesizes one only from a
declaration WITH a body node, which an expression-bodied closure lacks.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_0184RmD24KFJidYqpM7v3XjR

* fix(dart): give a closure binding a scope and a distinct identity (#2699 part B, S4)

Dart was the last language where a closure binding could not be a call SOURCE,
and fixing only that would have made the graph WORSE, not better. This lands
both halves together for that reason.

## The attribution half

A Dart closure had no scope at all. `dart/query.ts` declares no
@scope.function anywhere — Dart's function scopes are SYNTHESIZED in
`dart/captures.ts` from `declNode` + `findFunctionBody(declNode)`, and
`findFunctionBody` looked only at the next named SIBLING for a `function_body`.
A closure literal carries its body as a CHILD (`function_expression_body`), so
it matched nothing and no scope was produced.

`query.ts` gains the closure-binding declaration rule and `findFunctionBody`
understands the child form. Deliberately NO @scope.function is added to the
query: it would collide at identical range with the synthesized one, and
duplicate scope ids make `buildScopeTree` throw, which DROPS THE WHOLE FILE.

## The identity half, and why it is not optional

With attribution alone, two same-named closures in one file both keyed to the
bare `Function:a.dart:handler`. One node then appeared to call BOTH targets —
a CALLS edge present nowhere in the source. That is worse than the missing edge
it replaced, so S4 could not ship without this.

Root cause is not Dart-specific. `enclosingCallablePrefix` derives a SEMANTIC
relation — what encloses this callable — by SYNTACTIC ancestor walk. Dart parses
`int outer() { … }` as `function_signature` followed by `function_body` as
SIBLINGS, so the enclosing callable is never an ancestor of code inside it and
no membership set can fix that; the walk looks in the wrong direction.

This is what SCIP and real compilers avoid by construction. SCIP keeps a local
symbol opaque (`local <id>` — no name, no position, no chain) and models
containment as a SEPARATE `enclosing_symbol` field; its spec says the local/global
choice should follow ACCESSIBILITY, not the ability to name an enclosure. Dart's
own analyzer answers this from `Element.enclosingElement` in the element model,
never from AST ancestry. clang uses `name@offset` for a function-local; Kythe
uses a document-scoped VName plus a `childof` edge. Identity is positional and
opaque; enclosure is a relation.

`findSplitBodyCallableAncestor` is the narrow fix at that seam: a fallback used
ONLY when the ancestor walk finds nothing, recovering the callable from the
body's preceding sibling.

The sibling must be a BARE SIGNATURE, and that restriction is load-bearing —
"any preceding callable sibling" is WRONG and was caught regressing PHP during
this work. In `<?php function target($x) {…} $handler = function ($x) {…};` the
closure is at FILE level, so the ancestor walk correctly finds nothing, the
fallback runs, and an unrestricted version mis-qualified the file-level
`$handler` as `target.$handler`. A preceding sibling is only an ENCLOSING
callable when it cannot hold its own body.

`SPLIT_SIGNATURE_NODE_TYPES` is exactly that set and is DERIVED, not listed:
`LOCAL_SCOPE_BODY_NODE_TYPES` is already `FUNCTION_NODE_TYPES` minus the bare
signature types, so the difference between them IS the split-signature set
(`function_signature`, `method_signature` — verified at runtime). PHP's
`function_definition` carries a body and is in both, so it is excluded. No
language is named in shared code, and any future split-grammar language is
covered for free.

## Verification

Full resolver sweep — the gate that caught #2714's Rust regression — 2926
passed / 1 skipped / 0 failed across 51 files. closure-binding-labels 52/52;
dart.test.ts, dart-coverage, callable-id-lockstep, function-local-identity,
caller-identity-regression all pass (156/156 across 6 files).
impact on `enclosingCallablePrefix`: LOW, 5 impacted, 3 d=1 all inside
parse-worker. detect_changes {staged}: 5 changed symbols, 0 affected processes,
risk LOW.

Three existing Dart expectations FLIPPED rather than being deleted: Dart locals
now carry the same enclosing-callable + position identity every other language
got in #2695, so `local.dart:handler` became `local.dart:caller.handler@1:2`.
A new test pins the actual defect — two same-named closures staying DISTINCT
nodes — because the qualification assertions alone would not fail if the
fabricated edge returned.

One note for future work: an id-shape assertion here carries a call-site suffix
on indirect invocations (`…handler@3:2:5:9`) but not on direct calls. That is
the callable-value-flow pass keying its edge by invocation position, not part of
the node id.

Part B is now complete: PHP (S1), Rust (S3), Kotlin + Ruby (S2), Dart (S4).

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_0184RmD24KFJidYqpM7v3XjR

* fix(scope-resolution): close every deferred item on #2699 (A1 values, twin-list guard, schema bumps)

Clears the limitations this PR had been carrying rather than leaving them as
follow-ups.

## A1 — function-local VALUES now carry their own identity

This was #2699's ORIGINAL complaint and the one a callable-only gate could never
reach: a top-level `const handler` and a function-local `const handler`
collapsed onto ONE `Const:v.ts:handler`. #2695 restricted position-qualified
identity to Function|Method|Constructor because the collision that produced
wrong CALLS edges was between callables, and widening churned ids for symbols
the pruner mostly deletes. The churn is real and is accepted here deliberately.

Widening needed THREE gates aligned, not one:
  - id-building     — `parse-worker.ts` nestedCallablePrefix
  - resolution      — `ids.ts` position key
  - registration    — `node-lookup.ts` position-key registration

Missing the third would register no position key for values, so every lookup
misses and falls through silently. That is the #2714 failure mode: the caller
attaches to a node that does not exist and the edge is DROPPED, which looks like
"zero dangling edges" from outside. All three now route through ONE predicate,
`isPositionQualifiedLocalLabel`, rather than repeating the label set a third
time.

Only LOCALS move. The prefix comes from `enclosingCallablePrefix`, which returns
undefined when nothing encloses the declaration, so top-level and class-member
ids are untouched — verified by the full resolver sweep, where a leak onto class
members would have broken assertions in every language. `Property` is included
on purpose: a class field stays unqualified because the prefix walk boundaries
on class-likes, while an object-literal property inside a function is genuinely
local and would otherwise keep the old collision.

Measured: `Const:v.ts:handler` + `Const:v.ts:run.handler@3:2`, two distinct
nodes. The KNOWN LIMIT test is FLIPPED per its own former instruction ("this
test should be updated as part of it rather than deleted").

## Schema bumps — required by Part B, not just by A1

INCREMENTAL_SCHEMA_VERSION 20 -> 21, parse-cache SCHEMA_BUMP 27 -> 29.

SCHEMA_BUMP is 29, not 28, and that is the point of re-checking it against
origin/main at MERGE time rather than branch time. This branch cut at 27 and
bumped to 28; #2415 also bumped 27 -> 28 and merged first. The automated
main-merge onto this branch surfaced the collision — leaving it at 28 would have
shipped this whole change with NO parse-cache invalidation, so every warm cache
keeps replaying the pre-fix captures and ids. This is the third instance of that
collision recorded in parse-cache.ts (#2632/#2653 hit it at v21, and
#2653/#2654 hit INCREMENTAL_SCHEMA_VERSION the same way).

Part B already changed emitted node ids AND edges on files that did not
themselves change (Dart locals re-keyed, Rust gained a node it never emitted,
five languages gained closure-source attribution). A v20 index topped up
incrementally keeps serving the old attribution, and a warm parse cache replays
the old captures and ids verbatim. Shipping S1-S4 without these would have let
every existing index silently keep the pre-fix graph.

## Twin-list drift guard — the sixth instance in this family

`IMPLICIT_RECEIVERS` (gitnexus-shared lookup-core.ts) and `THIS_RECEIVERS`
(type-env.ts) spell the same concept in two packages, and nothing enforced
agreement — `$this` was added to the shared list in #2714 only because it was
already in the other. New structural test asserts set equality plus the ONE
deliberate asymmetry (`Me`, Visual Basic spelling, absent from the shared list
because no SupportedLanguages entry uses it) in BOTH directions, so re-adding it
there or dropping it here each fail loudly.

Structural rather than value-imported: both constants are module-private, and
exporting them purely to be testable would widen two public surfaces to satisfy
a test.

## Two false comments corrected

  - `lookup-core.ts` said "see the drift guard noted in #2714", implying a guard
    existed when it was only a deferred follow-up. It exists now, and the
    comment points at it.
  - `callable-id-lockstep.test.ts` claimed its regex "fails if any site
    reconstructs the id". It matches ONE template spelling; a hand-rolled
    concatenation still slips past. Now stated as a tripwire for the known
    shape, not a proof.

## Skill learnings

Four entries appended to eval/workflow_bench/learnings.jsonl from this run: the
v9fs safe-writer failure, backticks silently terminating a query template
literal (hit three times), a module-level TDZ const that passes tsc and then
presents as N file failures with ZERO failing assertions, and concurrent vitest
runs starving worker startup so a whole suite fails at ~5001ms.

## Verification

Full resolver sweep 2926 passed / 1 skipped / 0 failed (51 files) — identical to
pre-A1, which is the evidence that only locals moved. All EIGHT bench gates PASS
with fingerprints UNCHANGED, so no regeneration was needed. function-local-identity,
callable-id-lockstep, receiver-twin-list-drift and closure-binding-labels 71/71.
tsc --noEmit clean.

detect_changes {staged}: 9 changed symbols, 14 affected processes, risk HIGH —
expected, and the reason the sweep above is the gate rather than a targeted list.
Every affected process routes through `resolveDefGraphId`, the key chain Part A
measured at CRITICAL with 23 direct dependents.

Deliberately NOT done: the SCIP end state (opaque `local <id>` plus an explicit
enclosure EDGE instead of containment encoded in the id string). It is a design
direction, not a limitation of this work, and it is INCOMPATIBLE with A1 — A1
widens chain-encoded identity, that removes chain encoding entirely. Bundling
both would re-key every local twice. Written up in the research notes.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_0184RmD24KFJidYqpM7v3XjR

* test: update two assertions the #2699 changes correctly invalidated

Both failed on CI at da3d8397 and are fixed here. Neither is a behaviour
regression; both pinned values that this PR deliberately changed.

1. this-boundary.test.ts — "a Kotlin lambda still sees the receiver"

The `this.m()` edge still exists and `this` still resolves to the enclosing
receiver, which is the ONLY property this test exists to guard (its own comment
said so: "what matters here is only that the `this.m()` edge still exists at
all"). Only the SOURCE moved, from `run` to the lambda:

  Method:K.kt:K.run#0       -> Method:K.kt:K.run.f@2:16
  Method:K.kt:K.run.f@2:16  -> Method:K.kt:K.m#0

The comment justifying the old expectation is now false and is corrected rather
than left: it said the lambda "is not its own caller anchor" because Kotlin
scopes `lambda_literal` as a BLOCK. Kotlin still scopes it as a block (#1757 is
unchanged) — what changed in S2 is that a Block-kind scope is accepted as a
caller anchor when the scope IS the callable's body.

2. call-summary-schema-version.test.ts — INCREMENTAL_SCHEMA_VERSION pin

Moves 20 -> 21 with the bump, which is the point of pinning it: a change that
alters emitted ids or edges without bumping would otherwise ship silently.

Also adds the missing reuse-gate case. `passesReuseGate(20)` now asserts FALSE —
a v20 index predates closure bindings becoming call SOURCES, the Rust node for
`let f = || …`, the Dart closure scope + enclosing-callable identity, and
position-qualified function-local values. Topping such an index up incrementally
keeps serving the old attribution, including the Dart case where two same-named
closures collapsed onto one node and asserted a CALLS edge present nowhere in
the source.

Why CI found these and local verification did not: the verification set was
`test/integration/resolvers/` plus a hand-picked list, and both failures sat
outside it — one integration test about `this` (which a caller-attribution
change obviously touches) and one unit test pinning the exact constant that was
bumped. Grepping for the changed constant, and for tests asserting closure
attribution, would have found both. All 8 suites that reference the schema
constants were then run: 177/177, no third pin.

Verification: this-boundary + call-summary-schema-version 17/17;
the 8 schema-referencing suites 177/177. detect_changes {staged}: 0 changed
symbols, 0 affected processes, risk LOW (assertion-only edits).

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_0184RmD24KFJidYqpM7v3XjR

* fix(scope-resolution): resolve every finding from the multi-engine review of #2699 part B

The first cut of Part B shipped four P1 defects. A two-engine review (Claude
swarm + ce personas; Codex gpt-5.6-sol swarm + ce + adversarial) found all four,
three of them because an independent engine disagreed with the authoring one.
Each is fixed here and pinned in test/integration/closure-review-findings.test.ts.

## P1-1 — a multi-line closure binding fabricated a CALLS edge

The worst of the four, because it reintroduced the exact defect class #2699
exists to remove. The two query channels anchor on DIFFERENT nodes by design
(graph-node on the outer wrapper, scope-resolution on the inner closure) and the
bridge joins them on line only. Same line, the join matches. Split across lines:

    $multi =
        function ($x) { return target($x); };

the join missed, `resolveDefGraphId` failed closed, and `resolveCallerGraphId`
then CLIMBED to the parent scope — emitting `outer -> target` although `outer`
calls nothing, while the real `outer.$multi` node sat with zero outgoing edges.

`resolveCallerGraphId` now fails closed at the owning callable instead of
climbing. If we have identified the callable that owns a call site and cannot
name its graph node, crediting an ancestor is not graceful degradation — it
invents a relationship. A missing edge is the correct failure direction for a
graph whose consumers include `impact`.

Getting there took two attempts, worth recording: the first guard keyed on the
def's qualifiedName carrying the `@line:col` local marker, but that suffix is
added by parse-worker for GRAPH NODE ids and scope-resolution defs do not have
it, so the guard never fired. `pickCallerCallableDef` now reports whether the
callable came from a child scope, and the fail-closed applies to the owning
callable either way.

## P1-2 — TS constructor parameter properties were re-keyed as locals

A REGRESSION against the base, not merely an incomplete fix. Admitting
`Property` to the position-qualified set made the enclosing-callable walk reach
the constructor's `method_definition` THROUGH the parameter list — a
LOCAL_SCOPE_BODY hit that lands before any class boundary — so
`constructor(private readonly port: Port)` produced
`Property:svc.ts:Service.constructor.port@2:14` instead of `Service.port`. That
silently empties the slot `impact`, `rename` and FTS address while the class
still asserts HAS_PROPERTY against it, and it is the Angular/NestJS DI idiom.
A real instance exists in this repo at src/core/group/service.ts:304.

parse-worker.ts already computed the correct exemption (`isFunctionLocalProperty`,
lines 2245-2257) two lines above; the new ternary discarded it. Now reused, so
the owner-edge decision and the id decision cannot disagree.

## P1-3 — Dart top-level and `final` closures were never call sources

The rule matched only `initialized_variable_definition`, Dart's FUNCTION-LOCAL
shape. A top-level `var` is `initialized_identifier` and a top-level
`final`/`const` is `static_final_declaration`; the second declarator of
`var f = ..., g = ...` is also `initialized_identifier`. None got a declaration
capture, so `findFunctionBody` never synthesized their scope.
dart/captures.ts ALREADY listed all three in bindingNodeTypes for callable-flow
— the declaration rule simply did not mirror it. It does now.

## P1-4 — Ruby `do ... end` and `Proc.new` closures were uncovered

`do ... end` is the dominant MULTI-LINE Ruby style and produces `(do_block)`;
all three patterns matched `(block)` only. The scope channel already covered
both, so these closures got a Block scope owning nothing and their calls fell
through to the enclosing method. The PR's own Ruby test used the brace form, so
it passed.

Fixing it needed BOTH channels — tree-sitter-queries.ts had no graph-node rule
for the `(call)` forms either, exactly as Rust did. Verified: brace, do/end and
Proc.new are now all sources.

## Also from the review

- The split-signature fallback could fire on VALID TypeScript: a
  `declare namespace` containing a bodyless overload made the next declaration's
  `export_statement` a sibling of a `function_signature`, so `send` became
  `internalHelper.send@2:9`. The fallback now requires the matched node to be
  the signature's BODY (a body holds statements; a declaration wrapper holds
  another signature), which separates the two without naming a grammar.
- `isCallableDef` re-spelled `Function | Method | Constructor` in the same file
  that imports `isOverloadableCallable` and calls it three times — a NEW twin
  list, in the PR whose headline is a twin-list drift guard. It now delegates.
- A partial edit had left a self-contradictory comment in parse-worker.ts
  ("Restricted to CALLABLE labels: the / Applies to VALUES as well as callables").
- eval/workflow_bench/learnings.jsonl carried a "skill": "gitnexus-plan" entry,
  but that skill's SKILL.md:347 states feedback is chat-only and forbids
  appending learnings during a planning task. Dropped; the three gitnexus-work
  entries are sanctioned and stay.
- Ruby's lambda/proc patterns tested the method NAME only, so `MyMod.lambda { }`
  was captured as a closure binding. `!receiver` now constrains them.
- Rust's closure work (S3) had ZERO test coverage anywhere — verified once by a
  throwaway fixture and never pinned. Now covered.

## Verification

Full resolver sweep plus the identity/closure suites: 3017 passed / 1 skipped /
0 failed across 58 files (up from 2997 — the new tests). This is the gate that
mattered for P1-1: failing closed instead of climbing could have silently
deleted real edges in any language, and ~2900 resolver assertions say it did
not. All EIGHT bench fingerprint gates PASS with fingerprints UNCHANGED.
tsc --noEmit clean.

detect_changes {staged}: 14 changed symbols, 18 affected processes, risk
CRITICAL — expected, since P1-1 changes the fallthrough of `resolveCallerGraphId`,
the key chain Part A measured at CRITICAL with 23 direct dependents.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_0184RmD24KFJidYqpM7v3XjR

---------

Co-authored-by: Gergo Magyar <gergomagyar0@gmail.com>
Co-authored-by: Claude Opus 5 (1M context) <noreply@anthropic.com>
2026-07-28 18:25:19 +01:00
..
oracles feat(skills): GitNexus Engineering Tool Kits (#2566) 2026-07-19 15:07:24 +01:00
__init__.py feat(skills): GitNexus Engineering Tool Kits (#2566) 2026-07-19 15:07:24 +01:00
evolution.py feat(skills): GitNexus Engineering Tool Kits (#2566) 2026-07-19 15:07:24 +01:00
evolve.py fix(eval): pre-approve proposer tools under Claude Code 2.1.214 ENV_SCRUB hardening (#2576) 2026-07-20 11:25:49 +01:00
free-model.litellm.yaml feat(skills): GitNexus Engineering Tool Kits (#2566) 2026-07-19 15:07:24 +01:00
learnings.jsonl fix(scope-resolution): a closure binding is a call SOURCE in every language, and function-local values carry their own identity (closes #2699) (#2718) 2026-07-28 18:25:19 +01:00
oracle_assets.py feat(skills): GitNexus Engineering Tool Kits (#2566) 2026-07-19 15:07:24 +01:00
process_control.py feat(skills): GitNexus Engineering Tool Kits (#2566) 2026-07-19 15:07:24 +01:00
promotion_apply.py feat(skills): GitNexus Engineering Tool Kits (#2566) 2026-07-19 15:07:24 +01:00
proposer_sandbox.py fix(eval): give vitest a writable .vite-temp inside read-only dependency mounts (#2630) 2026-07-22 10:16:25 +01:00
README.md feat(skills): GitNexus Engineering Tool Kits (#2566) 2026-07-19 15:07:24 +01:00
runner.py fix(eval): bind resolved node to a fresh sandbox path (corrects #2607) (#2609) 2026-07-21 16:09:45 +01:00
runner_artifacts.py fix(eval): mount the node prefix for npx and catch nested Claude Code bootstrap noise (#2627) 2026-07-22 08:25:46 +01:00
runner_sessions.py fix(eval): bind resolved node to a fresh sandbox path (corrects #2607) (#2609) 2026-07-21 16:09:45 +01:00
runner_tasks.py feat(skills): GitNexus Engineering Tool Kits (#2566) 2026-07-19 15:07:24 +01:00
runtime_mounts.py fix(eval): mount hooks/claude into the benchmark sandbox 2026-07-20 12:53:24 +00:00
sanitized_graph.py fix(eval): bind resolved node to a fresh sandbox path (corrects #2607) (#2609) 2026-07-21 16:09:45 +01:00
task_assets.py fix(eval): give vitest a writable .vite-temp inside read-only dependency mounts (#2630) 2026-07-22 10:16:25 +01:00
tasks.scenarios.yaml feat(skills): GitNexus Engineering Tool Kits (#2566) 2026-07-19 15:07:24 +01:00

Workflow benchmark — observe the token savings

Measures whether the gitnexus-plangitnexus-work engineering workflow actually saves tokens versus a baseline agent on the same tasks, using real headless Claude Code sessions. Nothing is estimated: every number comes from the CLI's own final event in its parent-captured --output-format stream-json report.

What it compares

Arm Sessions Notes
workflow gitnexus-plan on the task, then gitnexus-work on the produced plan The skills must be installed (gitnexus setup, or repo-local .claude/skills/)
candidate_workflow same sessions as workflow, with a candidate skill overlay Paired with workflow on the same task/ref/model
workflow_direct one gitnexus-work direct-mode session The middle option — execution discipline without a planning pass
candidate_workflow_direct same session as workflow_direct, with a candidate skill overlay Paired with workflow_direct on the same task/ref/model
ce_workflow ce-plan on the task, then ce-work on the produced plan External comparator: the explicitly supplied, pinned compound-engineering plugin's plan→work family
ce_workflow_direct one ce-work direct-mode session External comparator paired with workflow_direct
review one gitnexus-review session over local uncommitted changes The task's setup applies the diff under review; the review is written to review-output.md so verify can gate on it
ce_review one ce-code-review session over the same changes External comparator paired with review
baseline one session with the identical task text --disallowedTools Skill so it cannot borrow the workflow; same repo, same MCP tools
baseline_nomcp like baseline, graph tools also disallowed Separates the workflow-discipline question from the GitNexus-tools question (off by default)

Every arm runs in a fresh detached git worktree of the task's ref, once per --runs. The model-visible verify command is recorded as authored_tests_passed, but cannot certify its own solution: resolved also requires the task's harness-owned hidden behavioral oracle to pass. Token savings on a failed task are flagged, not celebrated, and diff churn (files/+insertions/deletions vs the starting commit) is recorded as a cheap over-engineering proxy. Task class labels (trivial → investigation → cross-module) make the report readable as a routing table: the boundary where workflow starts beating workflow_direct and baseline is the boundary lfg's gate and work's direct-mode triage should encode.

Quick start

cd eval
export GITNEXUS_BENCH_AUTH_TOKEN="$ANTHROPIC_API_KEY"
uv run --locked --extra dev python -m workflow_bench.runner \
  --tasks workflow_bench/tasks.scenarios.yaml --runs 3 \
  --model claude-sonnet-4-20250514

Scenarios marked expensive: true are skipped unless --include-expensive is supplied. The report names both selected and skipped tasks so an omitted cell cannot be mistaken for evidence.

CE comparator arms never discover a user-level plugin. Supply an exact plugin release explicitly; both flags are mandatory whenever any ce_* arm is selected:

uv run --locked --extra dev python -m workflow_bench.runner \
  --tasks workflow_bench/tasks.scenarios.yaml --runs 3 \
  --model claude-sonnet-4-20250514 \
  --arms workflow ce_workflow \
  --ce-plugin-dir /opt/operator-input/compound-engineering-3.19.0 \
  --ce-plugin-version 3.19.0

The runner verifies the manifest version, copies only the plugin manifests, skills, scripts, and assets into a bounded no-symlink snapshot, and mounts that snapshot read-only only for CE arms. Every CE result records its exact plugin version and content-manifest digest.

Output: results/wfbench-<timestamp>/results.jsonl (every run, with session ids for transcript drill-down) and report.md (medians per task per arm, plus a savings row: input / cache / output tokens, cost, wall time).

Trust model — fail-closed Linux containment

Task files and candidate prose remain untrusted executable inputs. Every setup, verifier, incumbent, and candidate cell therefore runs in a preflighted Bubblewrap boundary with a private home/config/temp, a self-contained clone, a PID namespace, bounded process-tree ownership, and a deny-by-default environment. Task-declared dependency roots are mounted read-only, while graph assets are rebuilt by the harness as described below. Claude runs in bare, dontAsk mode with strict clone-local MCP configuration; Bash children do not inherit the model credential and their network sandbox denies all domains.

Prebuilt task .gitnexus assets are rejected. For each task commit, the harness creates the deterministic parentless snapshot first, removes every analyzer-visible path or stored source reference to the benchmark harness, neutralizes target-controlled GitNexus config/ignore files, and builds one fresh PDG index offline with --pdg --index-only --no-stats. It then proves that neither whole graph nodes nor relationships contain a harness marker and caches only the bound metadata/database assets for reuse by paired arms.

Each selected task also declares a bounded hidden oracle command and file set. The harness captures those regular, non-symlink files into an immutable in-memory snapshot before any arm runs and binds the command, paths, sizes, and raw bytes into the task digest. Before any task asset or model session, each disposable clone that contains the benchmark harness is rewritten to a clean, parentless snapshot without eval/workflow_bench; all original refs, reflogs, and unreachable Git objects are pruned so git show cannot recover the hidden bytes. Only after the model exits (and after the authored-test signal is collected) does the harness materialize the oracle beneath a private host root, mount it read-only at a random workspace sibling, and supply that mount through GITNEXUS_BENCH_ORACLE_ROOT. This layout preserves hidden tests' ../gitnexus imports as the credited candidate checkout. Authored and hidden verifiers run with the complete workspace read-only and networking unshared; hidden stdout/stderr is never persisted. The harness re-checks every oracle byte and erases the mountpoint before churn/patch capture. Shipped Vitest oracles use the staged, digest-bound vitest.config.mts; a candidate cannot replace repo test config or setup hooks to make the hidden test vacuously pass. The hidden command invokes the read-only dependency's Vitest binary directly, without an npx configuration/resolution layer.

Every evaluated repo-local skill root is over-mounted read-only for the full model session, and an immutable empty user-level skills directory prevents a writable $HOME skill from shadowing it. Skill-use evidence comes only from the bounded stream captured directly from Claude stdout by the parent. The runner parses every event through EOF, requires one final result, correlates an exact Skill request ID with one later successful result, structurally redacts the event objects, and stores the canonical redacted JSONL with a digest. Files written beneath the agent's $HOME are never trusted as evidence.

Bare mode is deliberately non-interactive: it does not consult a stored Claude login/keychain or ANTHROPIC_AUTH_TOKEN. Supply one explicit API or proxy key through GITNEXUS_BENCH_AUTH_TOKEN (preferred) or --auth-token; the harness maps it to ANTHROPIC_API_KEY only for the trusted Claude parent and scrubs it from agent-launched tools.

The trusted Claude CLI still needs outbound access to the explicitly supplied model endpoint. This is not a network broker, so the CLI itself retains that egress; agent-launched tools do not. Missing Bubblewrap, unsupported hosts, invalid mounts, or namespace preflight failure stop before model invocation. Native benchmark execution is therefore Linux/WSL2-only. Evidence assembly and hand-authored overlay preparation can happen elsewhere, but --initial-overlay does not bypass containment.

Prompt and skill evolution loop

Prompts age as models and tool harnesses change. Treat the current skills and router thresholds as an incumbent policy, not permanent truth. Candidate changes run offline in the same throwaway clones as the incumbent; production skills never rewrite themselves from a live task.

Build an overlay that mirrors only the canonical repo-local skill paths:

/tmp/gn-skill-candidate/
└── .claude/skills/
    ├── gitnexus-plan/SKILL.md
    └── gitnexus-work/SKILL.md

The overlay may contain Markdown files from either of those two skill trees. The runner rejects every other path, including source, test, and MCP configuration files, so a candidate cannot improve its score by changing the task or verifier. Arm selection is derived from the touched skill and must be exact: a plan-only overlay runs the workflow pair; any work overlay runs both workflow and direct-work pairs. Subsets and unrelated extra pairs fail before paid work. For a work overlay:

cd eval
uv run --locked --extra dev python -m workflow_bench.runner \
  --tasks workflow_bench/tasks.scenarios.yaml \
  --runs 3 --model claude-sonnet-4-20250514 \
  --arms workflow candidate_workflow \
         workflow_direct candidate_workflow_direct \
  --candidate-overlay /tmp/gn-skill-candidate

Candidate runs start from the same task commit, then receive a clean ephemeral commit containing the overlay. results.jsonl records the named model, task commit, task-prompt digest, skill digest, overlay digest, hidden-oracle command/manifest/content digests, immutable dependency content/manifest digests, separate authored-test and oracle outcomes, timestamp, local session ids, and digest-bound parent-captured event-stream artifacts. Those artifacts are the trajectory evidence: cluster failures and expensive detours, propose one bounded prompt change, and feed it back as the next overlay.

When candidate arms are present the runner also writes schema-3 promotion.json. It binds the immutable overlay digest, benchmark model, truthful candidate origin (a named proposer model or manual-initial-overlay), selected task definitions, resolved commits, and exact hidden-oracle bytes/commands, immutable dependency bytes, committed base digest of every apply destination, exact required arms, thresholds, and evidence expiry. Its default deterministic gate is deliberately conservative:

  • at least 3 paired VALID runs per task, zero excluded runs in either arm (session/infra-error rows therefore block promotion), and a named model;
  • the candidate must pass the hidden oracle on every valid run for every task;
  • no per-task resolution-rate regression (quality is lexicographically first);
  • promotion by resolution needs a margin of at least 2 resolved runs — a 1-run difference is noise at this run count and falls through to the efficiency comparison;
  • with equal quality, at least 5% median improvement on the promotion metric (default cost_usd — the only CLI-reported number that includes subagent spend; token metrics count only the main-loop session and flatter subagent-heavy candidates, so selecting one stamps a warning into promotion.json);
  • no individual task may regress the selected efficiency metric by more than 20%.

Tune the efficiency signal with --promotion-metric and the three --promotion-* thresholds. Applying requires one unique promote decision for every bound candidate arm. The driver then stages every canonical and shipped mirror, verifies that all destination bytes still match the bound bases, replaces them as one compare-and-swap set, verifies byte parity, and rolls every landed replacement back on failure or interruption. keep_incumbent and insufficient_evidence become the next learning queue; their raw results.jsonl rows carry the session_ids of the trajectories to inspect.

Re-run the paired suite whenever the named model or tool harness changes, and at least every 90 days otherwise. This is prompt-policy optimization using verified agent trajectories as reward evidence; it is intentionally not online model-weight RL. The same records can feed a later offline RL pipeline without weakening today's deterministic promotion boundary.

Closing the loop automatically (evolve.py)

workflow_bench.evolve automates the three manual arrows — propose, benchmark, apply — without moving the trust boundary:

cd eval
uv run --locked --extra dev python -m workflow_bench.evolve \
  --tasks workflow_bench/tasks.scenarios.yaml \
  --model claude-sonnet-4-20250514 --generations 2 \
  --seed-results results/wfbench-<prior-run>   # optional gen-0 evidence

Each generation: a confined proposer session reads the incumbent plan/work skills, the prior generation's results.jsonl loser rows, their session transcripts and patches, and the learning queue, then writes ONE bounded candidate overlay plus a reviewer-facing proposal.md. The overlay is re-validated by candidate_overlay_files (same boundary: Markdown under the plan/work trees, nothing else), frozen, and exercised only by its exact required pairs. Task refs are resolved once before generation zero and the immutable task bindings are forwarded to every generated runner invocation, so a moving branch cannot change later evidence. The deterministic gate then decides. Promotion application rejects older pre-oracle evidence schemas. promote stops the loop; with --apply the authorized frozen bytes are transactionally applied to the canonical .claude/skills/ trees and their shipped mirrors as an ordinary working-tree diff — committing, CI (shipped-skills-sync, skills-steering), and the PR merge stay human. keep_incumbent feeds that generation's trajectories to the next proposer. --initial-overlay skips the generation-0 proposer to benchmark a hand-written candidate; --proposer-model upgrades only the diagnosis session.

Learning queue. Live plan/work skill runs never self-edit (see each skill's "Skill feedback" section) — instead they may append one-line JSON notes to workflow_bench/learnings.jsonl (gitignored, machine-local like the transcripts they complement). The proposer reads the queue as hints, not ground truth: a learning only reaches a shipped skill by surviving the same paired benchmark as any other candidate. Legacy review/LFG rows are ignored; those skills do not yet have honest candidate lanes or promotion gates.

Run the driver on the existing re-evaluation triggers (model/harness change, 90-day staleness), not on a tight schedule — every generation costs ≥3 paired runs per task, and --generations is the only loop bound.

Free-model setup (no paid tokens)

Headless Claude Code honors ANTHROPIC_BASE_URL, and litellm (already an eval dependency) can proxy its Anthropic-compatible /v1/messages to a model that costs nothing — a hosted OpenRouter :free variant or a fully local Ollama model. Config template: free-model.litellm.yaml.

# 1. Choose a proxy master key and start the proxy
#    (pick/edit a model route in the yaml first; keep the proxy on loopback —
#    anyone who can reach the port with this key can spend the backend quota)
export LITELLM_MASTER_KEY="$(openssl rand -hex 16)"
uv run --locked --with 'litellm[proxy]' litellm --config workflow_bench/free-model.litellm.yaml --port 4000

# 2. Point the benchmark at it
uv run --locked --extra dev python -m workflow_bench.runner \
  --tasks workflow_bench/tasks.scenarios.yaml --runs 3 \
  --base-url http://localhost:4000 --auth-token "$LITELLM_MASTER_KEY" --model free-coder

Caveats, honestly:

  • Both arms run on the same model, so the comparison stays fair at any quality level — but small free models follow skills less reliably, so expect lower resolve rates and noisier savings than on frontier models. Treat free-model runs as directional; confirm headline numbers with a small paid run.
  • Through a proxy cost_usd reads ~0, and the CLI's token counts are NOT a substitute "real metric": they cover only the main-loop session, so subagent spend is invisible to both. For efficiency ranking, prefer a paid run gated on cost_usd, or sum per-session usage from the transcripts (~/.claude/projects/<cwd-slug>/<session_id>.jsonl, deduplicating events that share one message.id).
  • OpenRouter :free variants are rate-limited (~50 req/day on a fresh account); local Ollama has no limits.
  • Codex users: codex exec --oss runs local models for free too, but this runner is Claude-Code-first; a codex engine is a straightforward extension (parse its --json usage events).

Historical ground base (2026-07-11, Claude Code 2.1.207, unnamed model, n=1/cell)

These figures predate mandatory model provenance and are retained only as historical calibration. They are not eligible promotion evidence and must not be combined with current named-model runs.

Three task classes × three arms, single-repo (GitNexus itself). Every arm resolved every task — at this difficulty, pass/fail quality is saturated and the comparison is pure cost:

task (class) arm resolved cost $ wall turns vs baseline cost
trivial-version-alias workflow 1/1 9.16 16m 63 333%
trivial-version-alias baseline 1/1 2.11 2.8m 16
inv-bug-pdg-note workflow 1/1 14.56 21m 83 331%
inv-bug-pdg-note workflow_direct 1/1 5.23 7.5m 32 55%
inv-bug-pdg-note baseline 1/1 3.38 4.7m 22
inv-feature-list-repos-filter workflow 1/1 13.22 19m 84 211%
inv-feature-list-repos-filter workflow_direct 1/1 4.87 4.8m 38 15% (wall +14% faster)
inv-feature-list-repos-filter baseline 1/1 4.25 5.5m 32

What the ground base says, honestly:

  • The full plan→work workflow never paid for itself at this task scale (tasks a baseline agent finishes in ≤35 turns). Its fixed cost — freshness gate incl. analyzer rebuild + re-index, a full 13-section plan, work-phase re-anchoring — is ~$911 per task and needs much larger tasks, plan-reuse (one plan, several executors/sessions), or plan-as-deliverable flows to amortize.
  • workflow_direct is close to baseline (15% to 55% cost, once slightly faster wall) — the execution discipline (impact-before-edit, detect_changes-before-commit) is cheap. It produced noticeably more test coverage than baseline for near-equal cost on the feature task.
  • Quality didn't differentiate because nothing failed. The regime where the workflow should win on resolve rate — cross-module tasks where baselines flail — is the unmeasured cell (cross-module-parse-retry), and the next thing to measure, ideally with --runs 3+ on a free backend.
  • Caveats: n=1 per cell, one repo, one model; churn numbers from this run predate the intent-to-add/exclude-plans churn fix, so they are not comparable across arms and are omitted above.

Routing implication (to revisit as cells fill in): for tasks up to this size, gitnexus-work direct mode or a plain agent is the cost-optimal route; reserve full gitnexus-plangitnexus-work for cross-module work, multi-session execution, or when the plan document itself is a deliverable. If a future run shows the workflow flattering itself here, distrust the run.

Cross-module cell (same day, optimized skills, n=1)

The hardest class — retry-with-backoff across the worker-pool/pipeline seams, transient-vs-deterministic classification:

arm resolved cost $ wall turns churn
workflow 1/1 18.32 37m 107 4/+373/17
workflow_direct 1/1 9.53 15m 52 11/+244/66
baseline 1/1 18.03 34m 98 6/+345/69

(The workflow_direct row is the clean re-run under clone isolation — the original was contaminated, see the integrity note below.)

This is the cell where the discipline pays. workflow_direct — the execution skill without a planning pass — beat a plain agent by 47% cost and 56% wall time on the hardest class while resolving: impact-first navigation and gated commits prevented the flailing that baseline's 98 turns represent. The full workflow's premium vanished (1.6% vs baseline; 211%..333% on smaller classes) — fixed costs amortize here, with a less destructive diff and a durable plan artifact — but it didn't beat direct mode on any measured axis with the plan consumed only once. Resolve rate stayed tied across all cells; the savings story belongs to the execution discipline, and the planning pass is bought for its artifact (multi-session reuse, review, handoff), not for same-session token savings.

Benchmark integrity note (why churn earns its keep): the original workflow_direct cell reported an impossible 28-turn/$4.71 solve with churn byte-identical to the workflow arm — because git worktree add shares the ref namespace, the workflow arm's slug branch survived worktree removal, and the direct arm found and adopted the finished work. Fixed by giving every arm an isolated git clone --no-local --no-hardlinks with no object alternates (agent-created refs and storage die with the clone); the leaked branch was deleted and the cell re-measured. Treat identical churn fingerprints across arms as a contamination alarm.

Optimization re-measurement (same day, commit 830a0459)

After category-priced plan forms (compact ≤80 lines + mini-pack), category-priced freshness (accept for compact classes), per-category turn budgets, and the work-phase HEAD==pin fast path, the same inv-bug-pdg-note workflow cell re-measured (n=1):

ground base optimized delta
resolved
cost $ 14.56 11.70 20%
turns 83 72 13%
output tokens 59,789 53,345 11%
cache_read 6.64M 5.07M 24%
wall 21m 25m +15%

Verified in-transcript: the compact form fired (115-line plan vs 209 for a simpler task pre-optimization), the plan session dropped 72→49 turns, and NO analyzer rebuild/re-index executed. All savings came from the plan side; this run's work session drew a long test-debugging tail (hence the wall regression) — single-run variance cuts both ways. The optimizations narrow the gap but do not flip the regime: the workflow remains ~3.5× baseline on this task class, so the routing rule above stands unchanged.

Writing good tasks

See tasks.scenarios.yaml. Small enough to finish headless, real enough to require investigation — the workflow's savings come from not re-reading and not re-investigating, which trivial tasks never exercise. Keep verify as a model-visible authored-test quality signal, and add an independent oracle whose source files live under workflow_bench/oracles/. Oracle commands must run only files staged beneath $GITNEXUS_BENCH_ORACLE_ROOT; for Vitest, include the shared vitest.config.mts as an oracle file and pass it explicitly with --config. Prefer verify commands that use the repo's own npm scripts (they carry build pre-hooks).

Relation to the SWE-bench harness

The rest of eval/ benchmarks GitNexus tools inside a litellm agent loop (baseline vs graph-enhanced). This module benchmarks the skill workflow inside the real CLI harness those skills ship for. Different question, same spirit: measure, don't assume.