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228 commits

Author SHA1 Message Date
Copilot
2b0392cd83
feat(analyze): preserve existing embeddings by default; --force regenerates them; add --drop-embeddings opt-out (CLI + HTTP API) (#1055)
* Initial plan

* fix(analyze): preserve existing embeddings by default; add --drop-embeddings opt-out

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Co-authored-by: magyargergo <11230420+magyargergo@users.noreply.github.com>

* analyze: --force on embedded repo now regenerates embeddings (preserve+top-up)

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Co-authored-by: magyargergo <11230420+magyargergo@users.noreply.github.com>

* analyze: wire dropEmbeddings into HTTP API; log cache-load failures; extract pure deriveEmbeddingMode + behavioral tests; sync GUARDRAILS.md

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Co-authored-by: magyargergo <11230420+magyargergo@users.noreply.github.com>

---------

Co-authored-by: copilot-swe-agent[bot] <198982749+Copilot@users.noreply.github.com>
Co-authored-by: magyargergo <11230420+magyargergo@users.noreply.github.com>
2026-04-24 13:07:40 +01:00
Tom Hale
57808ef354
refactor(setup): migrate all config I/O to mergeJsoncFile (#1031) 2026-04-24 07:33:35 +01:00
Pratyush Sharma
3eeb2833e4
fix(fts): try local LOAD before INSTALL to avoid network failures (#726)
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2026-04-23 22:38:46 +01:00
Gergő Magyar
e00959dfb6
test(gitnexus): stabilize rel-csv-split stream teardown on Windows (expect.poll) (#1052)
* test(lbug): stabilize rel-csv-split Windows CI with expect.poll

Fixed sleeps assumed readline had already created the first mock stream
within 20ms; windows-latest can lag, causing streams.length===0 and
ENOTEMPTY tempdir cleanup. Poll up to 10s instead (Vitest 4).

Refs #1051

Made-with: Cursor

* test(lbug): use exact toBe assertions in rel-csv-split (DoD §2.7)

- Poll for streams.length === 2 after unblock (two pair keys only)
- disk-full test: streams.length === 1 for single Function|Class row

Made-with: Cursor

* test(lbug): replace rel-csv-split setTimeout waits with expect.poll

Shared pollOpts; drain-listener and disk-full tests now wait on streams.length
instead of fixed 50ms sleeps (DoD §2.7 deterministic tests).

Made-with: Cursor
2026-04-23 20:11:54 +01:00
azizur100389
ee871419e1
feat(ingestion): GITNEXUS_INDEX_TEST_DIRS opt-in for __tests__ / __mocks__ (#771) (#1046)
* feat(ingestion): GITNEXUS_INDEX_TEST_DIRS opt-in for __tests__ / __mocks__ (#771)

The DEFAULT_IGNORE_LIST hardcodes __tests__ and __mocks__ as
auto-filtered directory names. The comment at ignore-service.ts:273
explicitly documents this as intentional — .gitnexusignore negation
cannot override hardcoded entries. That default is right for the
majority of users, but for Quality Engineering workflows where test
files are the primary index target (tracing coverage via CALLS
edges), there was no escape hatch short of patching the installed
package.

Add an opt-in env var mirroring the GITNEXUS_NO_GITIGNORE /
GITNEXUS_MAX_FILE_SIZE precedent:
`GITNEXUS_INDEX_TEST_DIRS=1` removes __tests__ / __mocks__ from the
effective ignore set. Scope is deliberately limited to these two
names — the issue asked for these specifically, and other
test-adjacent entries (__snapshots__, snapshots, fixtures, .jest)
remain auto-filtered unchanged. .gitnexusignore negation semantics
are not touched; the env var is the orthogonal escape hatch.

Implementation: new `isEffectivelyIgnoredDirectory` helper in
ignore-service.ts wraps the `DEFAULT_IGNORE_LIST.has(name)` check
with the env-var opt-out. Two call-sites swap: shouldIgnorePath
(affects filesystem walker and wiki generator) and
createIgnoreFilter.childrenIgnored (affects directory pruning
during traversal). `isHardcodedIgnoredDirectory` export unchanged —
its contract is "is in the raw list", which remains true for
__tests__ / __mocks__ regardless of env var state (locked in by a
test).

Default behaviour is byte-identical for users who don't set the env
var. 9 new unit tests cover default-unset, opt-in-set, scoped scope
(other hardcoded entries unaffected), and the scope-discipline
guard (future expansion beyond the two named dirs fails loudly).
Env state restored by afterEach to prevent leakage.

Closes #771.

* feat(ingestion): .gitnexusignore negation overrides hardcoded DEFAULT_IGNORE_LIST (#771)

Per @magyargergo's review feedback: rather than add a special-case
GITNEXUS_INDEX_TEST_DIRS env var to unlock __tests__ / __mocks__,
let .gitnexusignore use !pattern negation to override the hardcoded
DEFAULT_IGNORE_LIST — mirroring the .gitignore mental model users
already know.

Implementation:
- New private hasExplicitUnignore(ig, rel) helper that walks ancestor
  segments and uses ignore.test(path)'s `unignored` flag to detect
  explicit negation. Ancestor-walk is required because .gitignore
  negation propagates — !__tests__/ implicitly unignores every
  descendant, but ignore.test() only reports unignored: true on the
  directly-matched path.
- createIgnoreFilter.ignored() and .childrenIgnored() now check
  hasExplicitUnignore BEFORE applying the hardcoded DEFAULT_IGNORE_LIST.
  If any ancestor (or the path itself) was explicitly unignored in
  .gitnexusignore, the hardcoded block is bypassed.
- shouldIgnorePath stays pure hardcoded-list — the wiki generator and
  other callers without per-repo config context keep deterministic
  behavior. The #771 override lives only inside createIgnoreFilter,
  which IS called with config.

Dropped:
- GITNEXUS_INDEX_TEST_DIRS env var (superseded by the more general
  negation mechanism)
- isEffectivelyIgnoredDirectory helper
- Associated env-var help text and unit tests

Added:
- Tip in analyze --help pointing users at .gitnexusignore with
  !__tests__/ as the example
- 8 new unit tests covering default behaviour, directory-level
  negation, selective overrides, generalisation (!node_modules/),
  non-leakage across hardcoded entries, standard non-negation rules
  still layering on top, and preservation of shouldIgnorePath /
  isHardcodedIgnoredDirectory contracts

Default behaviour (no .gitnexusignore or no negation pattern) is
byte-identical to pre-#771. Users who want to index an auto-filtered
directory add a single !pattern line — no env var, no flag, no
re-install.

Closes #771.

* fix(ingestion): honour re-ignore rules after .gitnexusignore negation (#771)

When .gitnexusignore contains both `!__tests__/` and
`__tests__/generated/`, the parent negation previously short-circuited
and allowed the re-ignored child through. Consult `ig.ignores(rel)`
after `hasExplicitUnignore` so a more-specific rule in the same file
correctly re-ignores a subset — matching .gitignore's last-match-wins
semantics. Adds a compound-pattern test locking this in.
2026-04-23 13:49:06 +01:00
Gergő Magyar
a7b3fa1b81
feat(csharp): migrate C# to registry-primary scope-resolution (Closes #934) (#1019)
* feat(csharp-scope): unit 1 — scope query + captures orchestrator

First slice of the C# scope-resolution migration (issue #934, RFC #909
Ring 3). Closes `Unit 1` of
docs/plans/2026-04-21-004-feat-csharp-scope-resolution-plan.md.

Adds:
- src/core/ingestion/languages/csharp/query.ts — tree-sitter scope
  query covering compilation_unit, namespace (block + file-scoped),
  class-like (class/interface/struct/record/enum), method-like
  (method/constructor/destructor/local_function/operator), property
  and field declarations, using directives, type bindings (parameter
  annotations, local variable annotations, constructor inference,
  invocation alias), and references (free call, member call including
  null-conditional, constructor call, member write).
- src/core/ingestion/languages/csharp/captures.ts — pass-through
  orchestrator mirroring python/captures.ts. Import decomposition
  (Unit 2), receiver-type-binding synthesis (Unit 3), and arity
  metadata synthesis (Unit 5) stub out for future units.
- src/core/ingestion/languages/csharp/cache-stats.ts — PROF
  instrumentation mirror of python/cache-stats.ts.

Design notes:
- Return-type / field-type / property-type captures deferred.
  tree-sitter-c-sharp does not expose these under a clean named field
  that pattern-matches. When Unit 7 parity gate surfaces a gap, add
  positional patterns or a post-hoc extractor lookup.
- object_creation_expression with qualified_name type — the qualified
  name itself is the reference text; captured as a whole via a
  dedicated tag so interpretation in later units can split namespace
  + name.
- Null-conditional calls use positional descendant patterns because
  tree-sitter-c-sharp's member_binding_expression and
  conditional_access_expression don't expose named fields.

Coverage:
- 23/23 new unit tests in
  test/unit/scope-resolution/csharp/csharp-captures.test.ts cover
  every capture tag. Confirmed against tree-sitter-c-sharp via the
  probe-script loop during development; grammar drift would surface
  as a capture-shape assertion failure.
- tsc --noEmit clean.

No changes to shared infrastructure. Resolver wiring + registration
land in Unit 6.

* fix(csharp-scope): capture null-conditional receiver + operator decls

Adversarial review surfaced two Unit 1 bugs that would silently
corrupt the graph once C# is flipped on the scope-resolution path:

- `obj?.Save()` only emitted @reference.name, so receiver-bound
  resolution downgraded to the free-call fallback and could mis-link
  to an imported `Save`. Capture the conditional_access_expression
  receiver under @reference.receiver.
- `operator_declaration` had @scope.function but no @declaration.method
  owner, so calls inside operator bodies were attributed to the
  enclosing class and the operator itself disappeared from method
  lookup. Capture the operator token as @declaration.name (downstream
  csharpMethodConfig normalizes to op_Addition etc.).
- `conversion_operator_declaration` was missing from both scope and
  declaration sets. Added with the target type as the name anchor.

Arity metadata for overload resolution remains deferred to Unit 5 and
gated behind Unit 7's parity flip, as documented in captures.ts.

* chore(scope-resolution): drop unused python/scopes.scm sibling

The file was documentation-only — the authoritative scope query is
the embedded `PYTHON_SCOPE_QUERY` constant in `python/query.ts`.
Nothing loaded the `.scm` at runtime, so it drifted from the code.
Remove it and update the four doc comments that pointed at it:

- language-provider.ts: "scopes.scm query" → "scope query (embedded
  in each language's query.ts)".
- languages/python.ts: capture-vocabulary pointer → query.ts.
- python/query.ts header: drop the "edit both together" note.
- python/receiver-binding.ts: "keeps the .scm declarative" → "keeps
  the embedded scope query declarative".
- scope/walkers.ts: "Python's scopes.scm" → "Python's scope query".

Historical plan docs under docs/plans/ still reference scopes.scm but
are frozen artifacts, not living documentation. C# never had a .scm
sibling, so no action needed there.

* feat(csharp-scope): Unit 2 — import interpret + target resolver

Adds the three files Unit 2 of the C# scope-resolution plan calls for:

- `import-decomposer.ts` — inspects each `using_directive` node and
  synthesizes `@import.kind/source/name/alias` markers. Kinds:
    `namespace`  — `using X;` / `using X.Y.Z;`
    `alias`      — `using Alias = X.Y.Z;`         (generics stripped)
    `static`     — `using static X.Y;`
  `global using` maps to namespace (plan's deferred decision); the
  `global::` qualifier is stripped before emitting.
- `interpret.ts` — reads the markers and builds `ParsedImport`. Static
  using maps to `kind: 'wildcard'` since it brings members into
  unqualified scope; Unit 4's merge-bindings tiers wildcards lowest.
  Also provides `interpretCsharpTypeBinding` with nullable/single-arg
  generic/qualifier stripping so receiver-typed resolution sees the
  concrete class name.
- `import-target.ts` — suffix-match adapter returning a single primary
  file. Cross-file partial-class aggregation runs later at graph-bridge
  time (Unit 6). The csproj-based `resolveCSharpImportInternal` stays
  on the legacy path until Unit 7's parity gate surfaces a gap.
- `captures.ts` routes `@import.statement` matches through the
  decomposer so the interpreter sees the markers it needs.

Tests cover every using flavor + resolution edge cases. 38/38 scope-
resolution C# unit tests pass; tsc clean.

* feat(csharp-scope): Unit 3 — simple hooks (binding/import/receiver)

Adds simple-hooks.ts mirroring Python's pattern:

- `csharpBindingScopeFor` — delegates to innermost (block scope is
  already captured by @scope.block in the query).
- `csharpImportOwningScope` — binds `using` inside a namespace to that
  namespace's scope so imports don't leak into sibling namespaces.
  File-level using delegates to module. Function-body using (not legal
  C# but possible from malformed input) attaches to the function.
- `csharpReceiverBinding` — looks up `this` / `base` in the function
  scope's type bindings; returns null for statics, free functions, and
  non-Function scopes. `this` / `base` synthesis itself is deferred to
  a follow-up (matches Python's receiver-binding.ts pattern).

9 new tests pin delegation semantics. 47/47 C# scope-resolution unit
tests pass; tsc clean.

* feat(csharp-scope): Unit 4 — mergeBindings (using precedence)

Three-tier shadowing, same shape as Python's LEGB merge:
  0: local      — class members, locals, parameters
  1: using      — namespace / named / reexport (equal tier; compiler
                  requires explicit qualifier if two using collide)
  2: wildcard   — `using static X.Y;` static-member imports

Within the surviving tier, de-dup by DefId (last-write-wins) so a
re-declared `using` cleanly replaces its earlier binding. Explicit
interface implementations bind under their qualified name in the
extractor layer, so they don't collide with plain simple names here.

7 new tests pin precedence + dedup semantics. 54/54 C# scope-resolution
unit tests pass.

* feat(csharp-scope): Unit 5 — arity metadata synthesis + compatibility

Adversarial review flagged overload narrowing as a blocker for the Unit
7 flip. This lands the declaration-side metadata; callsite-side arity
synthesis is a separate gap we'll address if the parity gate surfaces
overload misresolution.

- `arity-metadata.ts` — reads `csharpMethodConfig.extractParameters`
  and produces `{ parameterCount, requiredParameterCount,
  parameterTypes }`. `params` variadic collapses parameterCount to
  undefined (matches Python's `*args` treatment) and appends a literal
  `'params'` marker to parameterTypes so the compatibility hook can
  detect it without re-reading the AST. Default-valued parameters
  contribute to optionalCount → requiredParameterCount = total − optional.
- `arity.ts` — `csharpArityCompatibility(def, callsite)` returns
  compatible / incompatible / unknown. Mirrors Python's three-verdict
  shape so the central registry's arity filter works without adapter
  logic per-verdict.
- `captures.ts` — on every @declaration.method / @declaration.constructor
  / @declaration.function match, synthesize
  @declaration.parameter-count, @declaration.required-parameter-count,
  and @declaration.parameter-types captures. Covers method_declaration,
  constructor_declaration, destructor_declaration, operator_declaration,
  conversion_operator_declaration, and local_function_statement.

12 new tests: 5 on captures-side synthesis (method + params + types +
variadic + constructor + local function), 7 on the compatibility hook.
66/66 C# scope-resolution unit tests pass; tsc clean.

* feat(csharp-scope): Unit 6 — wire csharpScopeResolver + register

Creates the public barrel (index.ts) and ScopeResolver (scope-resolver.ts)
and plumbs them into the provider + registry:

- `languages/csharp/index.ts` — re-exports the hook entry points and
  documents the 8 known limitations of the registry-primary path
  (csproj-driven namespace resolution, multi-file namespace expansion,
  type-based overload resolution, nested generics, dynamic, preprocessor
  branches, cross-file global using, expression-bodied members).
- `languages/csharp/scope-resolver.ts` — ScopeResolver shape mirroring
  Python's. `isSuperReceiver` matches the literal `base` keyword.
  `fieldFallbackOnMethodLookup: false` since C# is statically typed
  — the type-binding layer already produces precise owner types;
  `propagatesReturnTypesAcrossImports: true` since signatures are
  authoritative.
- `languages/csharp.ts` — adds the 9 hook entry points to the provider
  (emitScopeCaptures, interpretImport, interpretTypeBinding, four
  simple hooks, mergeBindings, arityCompatibility, resolveImportTarget).
- `scope-resolution/pipeline/registry.ts` — registers csharpScopeResolver
  alongside the Python entry.

MIGRATED_LANGUAGES stays at {Python} — the resolver sits idle until
Unit 7's parity gate confirms ≥99% fixture parity. 368/368
scope-resolution unit tests pass; tsc clean.

* feat(csharp-scope): parity Unit 1 — this/base receiver-binding synthesis

Closes 3 parity failures (51 → 48). Target bucket: Category C from the
parity plan.

Changes:
- `languages/csharp/receiver-binding.ts` (new): walks up from a
  function node to the enclosing class/struct/record/interface,
  synthesizes `@type-binding.self` captures with boundName `'this'`
  (and `'base'` when the enclosing type is a class/record with an
  explicit base_list entry). Skips static methods and interface /
  struct `base` cases. Anchors to the method's `body` block so the
  scope-extractor's positionIndex places the binding inside the
  function scope (not the enclosing class scope).
- `languages/csharp/captures.ts`: route `@scope.function` matches
  through the synth, emitting the receiver captures as separate
  matches.
- `languages/csharp/interpret.ts`: map `@type-binding.self` to
  `source: 'self'` (parity with Python).
- `languages/csharp/query.ts`: explicit patterns for `this.X()`,
  `base.X()`, and `this.X = ...` / `base.X = ...` assignment writes.
  `this` and `base` are anonymous tokens in tree-sitter-c-sharp so
  the existing `expression: (_)` pattern (named-only) didn't match.

Tests:
- 8 new unit tests for receiver-binding synthesis edge cases
  (class/struct/record/interface, static, nested, constructor,
  local function inside method).
- Parity: 48 failed | 127 passed (175) under REGISTRY_PRIMARY_CSHARP=1;
  legacy path 175/175 green.

* feat(csharp-scope): parity Unit 2a — foreach + pattern + field captures

Closes 11 parity failures (48 → 37). Partial Unit 2 progress.

Adds type-binding captures for every shape the parity suite exercises
whose resolution path is in-file:

- Typed foreach `foreach (User u in xs)` — @type-binding.annotation
  with bindingName `u` and type `User`.
- Var foreach `foreach (var u in xs)` — @type-binding.alias so the
  generic-stripper unwraps `List<User>` / `Dictionary<K,V>.Values` to
  the element type at chain-follow time. Matches Python's for-loop
  alias pattern.
- `is` pattern `if (obj is User u)` — @type-binding.annotation with
  scope narrowing simplified to function scope (matches Python's
  match-case treatment since we don't emit @scope.block).
- `switch_section > declaration_pattern` (`case User u:`) — no
  case_pattern_switch_label wrapper in tree-sitter-c-sharp.
- `recursive_pattern` (`is User { Age: 1 } u` / `case User { ... } u:`)
  — named binding via type+name fields on the pattern node.
- Field declaration `private City _city;` — @type-binding.annotation
  attached to the class scope for `this._city.X` resolution.
- Property declaration `public User Owner { get; set; }` — same.
- Assignment rebind `alias = Factory()` / `alias = new User()` —
  @type-binding.alias / @type-binding.constructor so reassignment
  propagates type info to later receiver-typed resolution.

Closed tests: foreach (3), var foreach Tier 1c (2), is-pattern (1),
switch pattern (2), recursive_pattern (3). Remaining 37 include
tests that need cross-file same-namespace visibility (field chains,
assignment chain, cross-file return-type propagation) — deferred to
Unit 5 where the IMPORTS/cross-file work lives.

74/74 scope-resolution unit tests pass; legacy path 175/175 green.

* feat(csharp-scope): parity Unit 2b — same-namespace cross-file visibility

Closes 3 parity failures (37 → 34). Adds the C#-specific implicit
import that has no syntactic counterpart: every type declared in
`namespace X` is visible to every other file also declaring
`namespace X`, without any `using` directive.

Changes:
- `scope-resolution/contract/scope-resolver.ts` — new optional hook
  `populateNamespaceSiblings(parsedFiles, indexes, { fileContents })`.
  Most languages leave it undefined; Python / TypeScript / Java need
  explicit imports so there's no analogous pass.
- `scope-resolution/pipeline/run.ts` — invoke the hook after
  `buildWorkspaceResolutionIndex` and before
  `propagateImportedReturnTypes` so the return-type pass sees
  cross-file sibling class bindings.
- `languages/csharp/namespace-siblings.ts` (new) — groups top-level
  class-like defs by namespace name (extracted from source via regex
  since `file_scoped_namespace_declaration` scope range covers only
  the declaration line, not the rest of the file). Injects sibling
  classes into each file's Module AND Namespace scope bindings with
  origin='namespace'. Local declarations shadow cross-file siblings
  via mergeBindings tier precedence.
- `languages/csharp/scope-resolver.ts` — wire the hook.

74/74 scope-resolution unit tests pass; legacy path 175/175 green;
34 parity failures remain (was 37) under REGISTRY_PRIMARY_CSHARP=1.

* feat(csharp-scope): parity Unit 2c — alias/await/return-type captures

Closes 7 parity failures (34 → 27). Adds the remaining type-binding
shapes the parity suite exercises:

- `var alias = u;` / `alias = u;` — identifier-to-identifier alias.
  The resolver's chain-follow walks alias → u → u's declared type.
- `var u = svc.GetUser();` — chained method call alias. Anchors on
  the method_access_expression's `name` field; chain-follow picks up
  GetUser's return type.
- `var u = await Factory();` / `await svc.Get();` — await propagation.
  Strips the `await_expression` wrapper; interpret layer's
  `stripGeneric` handles `Task<T>` / `ValueTask<T>` unwrapping.
- `public User GetUser() { ... }` — method return-type annotation
  via `@type-binding.return`. Required for `propagateImportedReturnTypes`
  to see the return type in later cross-file passes. Covers identifier,
  generic_name, qualified_name, and nullable_type return shapes.

74/74 scope-resolution unit tests pass; legacy path 175/175 green;
27 parity failures remain under REGISTRY_PRIMARY_CSHARP=1.

* feat(csharp-scope): parity Unit 3a — cross-namespace `using` binding

Closes 2 parity failures (27 → 25). Extends the namespace-siblings
pass to resolve `using X;` directives against known namespace
buckets: for each `using` that targets a namespace declared
somewhere in the workspace, inject that namespace's classes into
the importer's module scope with origin='namespace'.

This is the scope-resolution analog of legacy's csproj-driven
directory↔namespace mapping. Without it, `new User()` in
`Services/UserService.cs` (namespace MyApp.Services) can't see the
User class in `Models/User.cs` (namespace MyApp.Models) even with
`using MyApp.Models;` — the scope-resolver layer doesn't have
csproj metadata to translate the dotted namespace path into a
directory lookup.

Legacy 175/175 green; 25 parity failures remain.

* feat(csharp-scope): parity Unit 3b — constructor CALLS emission

Closes 3 parity failures (25 → 22). Adds constructor-form CALLS
edge emission + C# 12 primary constructor synthesis.

Changes:
- `scope-resolution/passes/free-call-fallback.ts`: when a site's
  callForm === 'constructor', look up the class def (not a callable)
  and pick its explicit Constructor def via workspaceIndex's
  memberByOwner — or fall back to the Class def itself for implicit
  constructors. Matches legacy behavior (targetLabel === 'Constructor'
  when explicit, 'Class' when implicit).
- `scope-resolution/pipeline/run.ts`: pass workspaceIndex to the
  free-call fallback.
- `languages/csharp/captures.ts`: synthesize @declaration.constructor
  for C# 12 primary constructors — `class User(string name, int age)`
  / `record Person(string First, string Last)`. The parameter_list is
  a named child of the class_declaration / record_declaration (not a
  separate constructor_declaration node). Skip the synthesis when
  the type already has an explicit constructor to avoid duplicates.
  Emits @declaration.parameter-count + required-parameter-count
  alongside.

Legacy 175/175 green; 376/376 scope-resolution unit tests pass;
22 parity failures remain.

* feat(csharp-scope): parity Unit 3c — static call + default-namespace

Closes 2 parity failures (22 → 21).

- `receiver-bound-calls.ts`: add Case 5 for class-as-receiver. When
  `Animal.Classify()` has an identifier receiver that resolves to a
  Class binding (rather than a variable with a typeBinding), look up
  the member on the class's MRO chain. Covers C#-style static calls
  and any type-qualified member access. Python doesn't hit this
  because `ClassName.method()` is syntactically identical to a free
  call there.
- `namespace-siblings.ts`: treat files with no `namespace X;`
  declaration as living in the default (empty-name) bucket, so
  types declared in no-namespace files share cross-file visibility.
  Required for fixtures without explicit namespaces (e.g. the
  method-enrichment fixture's Animal/App/Dog classes).

Legacy 175/175 green; 21 parity failures remain.

* feat(csharp-scope): parity Unit 4 — callsite arity synthesis (infra)

Synthesize @reference.arity on every invocation_expression and
object_creation_expression by counting `argument` named children of
the backing `argument_list`. Wires the capture-to-Callsite pipeline
shared extractor already consumes (`scope-extractor.ts:878`).

No parity-count movement: the remaining arity-adjacent failures
(overload disambiguation, optional-parameter dedup, variadic
resolution) need type-based argument inference or member-call dedup,
both explicitly deferred in the plan's Known Limitations section.
This commit is infrastructure — future work lands on top of it.

Legacy 175/175 green; 21 parity failures remain.

* feat(csharp-scope): parity Unit 5a — IMPORTS edge + static-using mapping

Closes 1 parity failure (21 → 20). Fixes cross-file IMPORTS edge
emission for C#:

- `languages/csharp/interpret.ts`: map `using static X.Y;` to
  `kind: 'namespace'` rather than `'wildcard'`. The File→File
  IMPORTS edge needs a non-wildcard kind to survive finalize's
  Phase 4 (wildcard-expanded edges drop to empty when the provider
  doesn't implement `expandsWildcardTo`). Unqualified static-member
  access is a deferred limitation — covered by the namespace-siblings
  cross-namespace pass for type lookups, and documented under the
  module's Known Limitations.
- `languages/csharp/import-target.ts`: progressive prefix stripping.
  `using CrossFile.Models;` in a repo laid out `Models/User.cs` (no
  `CrossFile/` directory) works because the legacy resolver consults
  csproj; the scope-resolver tries each suffix of the dotted path
  against `.cs` files. Also handles `using static NS.Type;` by
  stripping leading segments until a direct match lands.
- `test/unit/scope-resolution/csharp/csharp-imports.test.ts`: update
  the `using static` test to the new namespace-kind shape.

376/376 scope-resolution unit tests pass; legacy 175/175 green;
20 parity failures remain.

* feat(csharp-scope): parity Unit 5b — return-type module hoist + chain fallback

Closes 1 parity failure (20 → 19) and lays groundwork for Unit 6.
Based on investigation-agent findings, addresses cluster of 7
cross-file + chain tests whose return-type bindings were stuck at
Class scope and invisible to the chain-follow and propagation passes.

Changes:
- `languages/csharp/simple-hooks.ts::csharpBindingScopeFor`: when the
  declaration is a `@type-binding.return`, hoist the binding all the
  way to the Module scope. The central extractor's auto-hoist only
  promotes one level (Function → Class); for C# methods the parent
  is always a Class, so without this override the return binding
  never reaches Module where chain-follow and cross-file
  `propagateImportedReturnTypes` read from.
- `scope-resolution/passes/compound-receiver.ts`: when the
  class-scope typeBindings lookup at `objClass.typeBindings.get(
  methodName)` misses, walk up from the class scope through the
  parent chain (→ Module) for a return-type binding. Preserves the
  existing class-scope fast-path while restoring owner-chain lookup
  for languages that hoist to Module.

Python parity suite stays 204/204 green on both flag paths;
legacy C# 175/175 green; 19 C# parity failures remain.

* feat(csharp-scope): parity Unit 5c — switch-expr + reasons + ACCESSES 1.0

Closes 4 parity failures (19 → 15).

- `languages/csharp/query.ts`: add captures for `switch_expression_arm`
  with `declaration_pattern` and `recursive_pattern`. C# expression-
  switch (`obj switch { User u => ..., Repo { Name: "x" } r => ... }`)
  uses a different AST node from classic `switch_statement`'s
  `switch_section` — needed separate query patterns.
- `scope-resolution/passes/receiver-bound-calls.ts`: replace the
  self-describing `'scope-resolution: *-receiver'` reason strings
  (which fail legacy-parity consumer filters) with the legacy
  convention: `'import-resolved'` when the resolved member lives in
  a different file, `'global'` otherwise. Mirrors
  `free-call-fallback.ts`'s existing reason logic.
- `scope-resolution/passes/receiver-bound-calls.ts`: pass
  `confidence: 1.0` to `tryEmitEdge` for write/read ACCESSES edges,
  matching legacy DAG behavior (default 0.85 was legacy-CALLS).

Python parity 204/204 on both flag paths; legacy C# 175/175;
15 C# parity failures remain.

* feat(csharp-scope): parity Unit 5d — cross-file typeBinding mirror

Closes 3 parity failures (15 → 12).

`languages/csharp/namespace-siblings.ts`: extend the pass to mirror
method return-type bindings from accessible sibling files' Module
scopes into the importer's Module scope. "Accessible" =
same-namespace siblings + `using namespace X;` targets.

Without this mirror, `var u = svc.GetUser()` in App.cs couldn't
chain-follow to User even after Unit 5b's module-scope hoist:
`GetUser → User` lived on User.cs's Module scope, which isn't on
the ancestor chain of App.cs's function scope, and
`propagateImportedReturnTypes` only mirrors across explicit
ImportEdge targets (not same-namespace implicit visibility).

Closes: var-invocation return type, async/await u.Save (ambient
namespace), cross-file return-type propagation (via u.Save /
u.GetName in Program.cs).

Python parity 204/204 on both flag paths; legacy C# 175/175;
12 C# parity failures remain.

* feat(csharp-scope): parity Unit 5e — namespace-prefix bucket matching

Closes 2 parity failures (12 → 10).

`languages/csharp/namespace-siblings.ts`: when matching accessible
namespaces against class buckets, also probe every dotted prefix.
`using static CrossFile.Models.UserFactory;` parses into the
importer's accessible-namespace set as the full type path, but the
matching bucket is keyed on the containing namespace
(`CrossFile.Models`). Walking back through the dotted segments
ensures the static-using importer sees the containing namespace's
sibling files' return-type bindings.

Legacy 175/175 green; 10 C# parity failures remain.

* feat(csharp-scope): parity Unit 6a — class-like owner extension

Closes 1 parity failure (10 → 9). Extends `populateClassOwnedMembers`
to recognize Interface / Struct / Record / Enum / Trait as class-like
owners, not just Class.

The C# scope query collapses interface_declaration / struct_declaration
/ record_declaration / enum_declaration to @scope.class (they share
body-scope semantics), but the declaration-side tags produce defs of
type Interface / Struct / Record / Enum. `populateClassOwnedMembers`
previously only looked for Class-typed defs in class scopes, so
interface members (including C# 8+ default methods) never got
ownerIds — making them invisible to `findOwnedMember` via
`memberByOwner`.

With this fix, `user.Validate()` on a variable typed as `IValidator`
resolves correctly: receiver-bound-calls Case 4 finds IValidator via
findClassBindingInScope (which already accepted Interface), walks the
chain, and findOwnedMember locates Validate now that the interface
default has a proper ownerId.

Legacy C# 175/175 green; Python parity 204/204 on both flag paths;
9 C# parity failures remain.

* feat(csharp-scope): parity Unit 6b — member-call dedup + handled-site fix

Closes 1 parity failure (9 → 8). Adds the missing legacy-parity
behavior: collapse multiple member-call sites from the same caller
to the same target into one CALLS edge.

Changes:
- `scope-resolution/contract/scope-resolver.ts`: new optional
  `collapseMemberCallsByCallerTarget` flag. Default false (preserves
  the per-site invariant); C# sets it true.
- `scope-resolution/graph-bridge/edges.ts`: dedup key drops
  `line:col` when `collapseByCallerTarget` is on AND edgeType is
  `CALLS` (ACCESSES writes keep per-site granularity).
- `scope-resolution/passes/receiver-bound-calls.ts`: plumbs
  `collapse` through every `tryEmitEdge` call, and crucially marks
  `handledSites.add(siteKey)` whenever a resolved def was found —
  not only when the edge was freshly emitted. Otherwise the site
  leaked through to `emitReferencesViaLookup` which re-emitted a
  per-site edge, defeating the collapse.
- `languages/csharp/scope-resolver.ts`: opt in to the collapse.

Python parity 204/204 on both flag paths; legacy C# 175/175 green;
8 C# parity failures remain.

* feat(csharp-scope): parity Unit 6c — Dictionary.Values / .Keys unwrap

Closes 2 parity failures (8 → 6).

Dictionary<K,V>.Values in a foreach binds the element to V; .Keys
binds to K. Without this, `foreach (var user in data.Values)` where
`data: Dictionary<string, User>` couldn't propagate user's type to
User, and `user.Save()` stayed unresolved.

Changes:
- `languages/csharp/interpret.ts`: don't strip the qualifier when
  the final dotted segment is a known collection accessor
  (`Values` / `Keys`). Preserves the dotted form so downstream
  resolvers can unwrap the receiver's generic type based on the
  suffix.
- `scope-resolution/passes/compound-receiver.ts`: new
  `extractDictionaryArgs` helper splits `Dictionary<K, V>` at the
  top-level comma. In the dotted-access walk, detect trailing
  `.Values` / `.Keys` and return V/K via findClassBindingInScope
  instead of the normal class-walk (Dictionary itself isn't a
  local class def).
  - Handles nested cases: `this.data.Values` walks `this.data`
    recursively (resolving `data` as a field on `this`'s class)
    before applying the unwrap.
- `scope-resolution/passes/receiver-bound-calls.ts` Case 3b: when
  the typeRef's trailing segment is an accessor, pass the raw
  dotted path to `resolveCompoundReceiverClass` without appending
  `()` — the extra parens would misroute to the call-expression
  branch.

Python parity 204/204 on both flag paths; legacy C# 175/175 green;
6 C# parity failures remain.

* feat(csharp-scope): parity Unit 6d — using-static member injection

Closes 2 parity failures (6 → 4). `using static X.Y.Z;` now injects
every public static method of class Z into the importer's module
scope, so `Record("hi")` (without `Logger.` qualifier) resolves to
`Logger.Record` as a free call.

`languages/csharp/namespace-siblings.ts`: regex-scan each file's
source for `using static X.Y.Z;` directives. For each, look up the
class Z in the `X.Y` namespace bucket, walk its owning file's
localDefs for method/function members with `ownerId === Z.nodeId`,
and inject them as `origin: 'import'` bindings in the importer's
module-scope finalized bindings map. `findCallableBindingInScope`
then picks them up via its imported-bindings check.

Closes: variadic `Record(params string[])` + heritage arity
narrowing `WriteAudit`.

Python parity 204/204 on both flag paths; legacy C# 175/175 green;
4 C# parity failures remain (interface-dispatch pass + type-based
overload disambiguation).

* feat(csharp-scope): parity Unit 6e — overload disambig + interface dispatch + FLAG FLIP

Closes the final 4 parity failures (4 → 0). C# now runs the
registry-primary scope-resolution path by default — added to
MIGRATED_LANGUAGES.

Changes:
- `scope-resolution/scope/walkers.ts`: was already extended in
  Unit 6a to recognize Interface/Struct/Record/Enum as class-like
  owners (interface default methods get ownerIds).
- `scope-resolution/passes/receiver-bound-calls.ts`: build
  IMPLEMENTS edge index → emit secondary `interface-dispatch`
  CALLS edges to every implementor's same-named member when the
  primary receiver-typed edge targets an Interface method (closes
  heritage CreateUser CALLS-count test).
- `scope-resolution/passes/receiver-bound-calls.ts`: new
  `pickOverload` helper narrows multi-valued
  `membersByOwner.get(owner).get(name)` candidates by arity then
  argument types. Replaces the first-seen `findOwnedMember` lookup
  in Case 4 so receiver-typed overloaded calls pick the right def.
- `scope-resolution/passes/free-call-fallback.ts`: new
  `pickImplicitThisOverload` walks up to the enclosing class scope
  and applies the same arity + argument-type narrowing for free
  calls inside a class body (`Lookup("alice")` → `Lookup(string)`).
- `scope-resolution/workspace-index.ts`: new `membersByOwner`
  multi-valued index (`Map<owner, Map<name, Def[]>>`) preserves
  every overload alongside the existing first-seen `memberByOwner`.
- `scope-resolution/graph-bridge/node-lookup.ts` +
  `scope-resolution/graph-bridge/ids.ts`: include parameter-types
  suffix in the qualified lookup key for Method nodes. Legacy
  parse-phase encodes the type tag into the node id (`Method:f.cs:
  UserService.Lookup#1~int`); without this two same-arity overloads
  collapsed to one lookup entry and routed to the wrong graph node.
- `scope-resolution/contract/scope-resolver.ts`: new
  `collapseMemberCallsByCallerTarget` opt-in flag (was added in
  Unit 6b for member-call dedup; documented here).
- `gitnexus-shared/src/scope-resolution/reference-site.ts`: new
  `argumentTypes` field carrying inferred per-arg types.
- `scope-extractor.ts`: read @reference.parameter-types capture into
  `site.argumentTypes` and add it + the declaration-arity tags to
  KNOWN_SUB_TAGS so the anchor-detection picks the right anchor.
- `languages/csharp/captures.ts`: synthesize @reference.parameter-types
  by inferring arg types from literal AST nodes (integer_literal →
  'int', string_literal → 'string', constructor_expression →
  type-name, etc).
- `languages/csharp/scope-resolver.ts`: opt in to
  `collapseMemberCallsByCallerTarget`.
- `registry-primary-flag.ts`: **add CSharp to MIGRATED_LANGUAGES**.

Final state:
- C# parity: 175/175 green on flag-on AND flag-off.
- Python parity: 204/204 green on both flag paths (no regression).
- TypeScript clean.

51 → 0 failures across 18 commits on `feat/csharp-scope-resolution`.

* refactor(scope-resolution): extract language-specific accessor unwrap to provider hook

Optimizer pass: move C# Dictionary-family `.Values`/`.Keys` handling
out of the shared `compound-receiver.ts` (where it had hardcoded
regex + accessor names) into a provider-level
`unwrapCollectionAccessor` hook. The shared pass now takes an
arbitrary language-specific unwrap function; C# supplies its
Dictionary implementation in `languages/csharp/accessor-unwrap.ts`.

Related cleanup in `receiver-bound-calls.ts` Case 3b: replace the
hardcoded `tail === 'Values' || tail === 'Keys'` accessor check with
a try-dotted-walk-first / fall-back-to-call-form strategy. This
removes the last C#-specific branch in the shared pass and makes the
logic generalize cleanly to other languages that use property-style
accessors for collection views (Kotlin `.size`, future languages).

Changes:
- `scope-resolution/contract/scope-resolver.ts`: new optional
  `unwrapCollectionAccessor(receiverType, accessor) => string | undefined`
  hook. Documented as language-specific with examples.
- `scope-resolution/passes/compound-receiver.ts`: delete
  `extractDictionaryArgs`, accept `unwrapCollectionAccessor` via
  options, call it for trailing accessor segments.
- `scope-resolution/passes/receiver-bound-calls.ts`: plumb the hook
  through to `resolveCompoundReceiverClass`, remove the
  C#-hardcoded Case 3b accessor check.
- `languages/csharp/accessor-unwrap.ts` (new): C# Dictionary-family
  regex + element-type extraction.
- `languages/csharp/scope-resolver.ts`: opt in.

Audit outcome: everything else added across the 19 C# migration
commits is either correctly scoped to `languages/csharp/` (query,
captures, namespace-siblings, receiver-binding, interpret, imports)
or correctly generic in shared paths (argumentTypes field,
collapseMemberCallsByCallerTarget flag, overload narrowing via
parameterTypes, interface-dispatch via IMPLEMENTS edges, class-like
owner extension for Interface/Struct/Record/Enum, type-tagged node
IDs, module-scope return-type lookup fallback).

175/175 C# green on both flag paths; 204/204 Python green on both
flag paths; TypeScript clean.

* refactor(scope-resolution): gate module-scope typeBinding walk-up on hook

Add optional `hoistTypeBindingsToModule` to the ScopeResolver contract
and gate the Module-scope walk-up in `resolveCompoundReceiverClass` on
it. Only providers that hoist method return-type bindings to Module
scope (C#) opt in; Python and other providers no longer traverse that
fallback path.

Closes the architectural leak flagged in the production-readiness
review: the walk-up was unconditional and therefore widened Python's
code path despite existing only for C#.

No behavior change for C# (hook=true restores the prior lookup). No
behavior change for Python (hook undefined = walk-up skipped, matching
pre-PR behavior).

Verified:
  - npx tsc --noEmit           clean
  - C# unit suite              74/74 passing
  - C# + Python integration    388/388 passing

* refactor(csharp-scope): remove as-unknown-as double casts in scope-resolver

Tighten three type boundaries that were previously papered over with
`as unknown as` casts:

  * `CsharpResolveContext.allFilePaths`: `Set<string>` → `ReadonlySet<string>`.
    The orchestrator only hands out a read-only view; drop the widening
    cast at the resolver-adapter site.
  * `resolveCsharpImportTarget`: call passes the narrow context directly.
    `WorkspaceIndex` is `unknown` in the shared contract, so the
    `as unknown as WorkspaceIndex` cast was gratuitous — structural
    assignability covers it.
  * `csharpMergeBindings`: drop unused `_scope: Scope` parameter. The
    implementation never read it; the cast chain in `scope-resolver.ts`
    existed only to satisfy an unused slot. LanguageProvider.mergeBindings
    now wraps with a tiny arrow adapter; ScopeResolver.mergeBindings
    passes through directly.

No runtime behavior change. `grep 'as unknown as' csharp/scope-resolver.ts`
returns zero matches.

Verified:
  - npx tsc --noEmit           clean
  - C# unit + integration      462/462 passing (incl. Python integration)

* test(csharp-scope): integration fixtures for Units 6c/6d/6e runtime behavior

Close the integration-coverage gap flagged in the production-readiness
review. Units 6c (collection-accessor unwrap), 6d (using-static member
injection), and 6e (overload disambig + interface dispatch) previously
had only hook-level unit tests; the end-to-end wiring was exercised
only by the parity harness.

Three minimal fixtures + four new it() blocks:

  * csharp-collection-accessor — RenderAll iterates
    Dictionary<string, Widget>.Values and calls .Render(); asserts the
    CALLS edge lands on Widget.Render.
  * csharp-using-static — `using static Helpers.MathUtils;` makes
    Square(int) a free-callable in the consumer; asserts the CALLS
    edge lands on MathUtils.Square.
  * csharp-overload-interface — three assertions:
      1. Run → Log binds to the 2-arg overload only (arity narrowing);
         verified via target Method node's parameterTypes.length === 2.
      2. Run → Greet emits one primary edge to IGreeter.Greet plus two
         reason='interface-dispatch' siblings to En/FrGreeter.Greet.
      3. Interface-dispatch fan-out excludes the primary target.

Verified:
  - csharp integration        189/189 passing

* docs(scope-resolution): de-c#-ify optional-hook doc-comments on contract

Rewrite the doc-comments on four optional hooks so they describe the
behavior and when a provider would enable it, rather than naming C#
as the sole consumer. Hook names were already generic — only the
comments had baked in one-language framing, which risked discouraging
future reuse.

Affected hooks:
  * unwrapCollectionAccessor
  * collapseMemberCallsByCallerTarget
  * populateNamespaceSiblings
  * hoistTypeBindingsToModule

Language-specific rationale stays where it belongs — next to the hook
assignment in `languages/csharp/scope-resolver.ts`. Zero-match grep for
`C#|csharp|CSharp` in the contract file confirms the separation.

No code change.

* docs(csharp-scope): justify regex-based namespace-sibling detection

Record why `namespace-siblings.ts` uses regex over AST walks and
enumerate the known misses so the next reader has ground to stand on:

  * `global using static X.Y;` — no plain `using static` token.
  * Aliased `using static X = Y.Z;` — `=` breaks the pattern.
  * Attributed namespace declarations between `]` and `{`.
  * Multi-namespace files — first-wins attribution.
  * Preprocessor-gated namespace declarations — textual branch only.

Rationale: the pass is file-path-driven and the tree-sitter tree isn't
available at its call site (the orchestrator feeds raw fileContents);
re-parsing to count namespaces would cost more than the regex walk.
Refactor to AST-driven detection is deferred to a separate PR.

Mirrored the known-miss list into `csharp/index.ts`'s limitations
ledger so the operator-visible surface and the in-code justification
stay in sync.

No code change.

* refactor(csharp-scope): AST-driven namespace detection with treeCache reuse

Replace regex-over-source-content with tree-sitter AST walks in
namespace-siblings.ts; thread the orchestrator's treeCache through
the populateNamespaceSiblings hook so the pass reuses the same parse
trees `extractParsedFile` already consumed (single-source-of-truth
for the AST — no double-parse).

Behavior gains (no longer "known misses"):
  * `global using static X.Y;` is now detected.
  * Aliased `using static X = Y.Z;` is now detected.
  * Attributed namespace declarations (`[attr] namespace X`) parse
    correctly because tree-sitter sees them as one node.
  * Preprocessor-gated namespace declarations parse via the grammar.

Contract change (additive, optional):
  * `populateNamespaceSiblings` ctx now carries an optional
    `treeCache?: { get(filePath): unknown }`. Existing providers that
    don't set it on `RunScopeResolutionInput` see undefined, and the
    hook falls back to a fresh parse (current behavior preserved on
    cache miss).

Limitation ledger updated in csharp/index.ts: the AST-based detection
removes 4 of the 5 prior known misses; only "first-wins multi-namespace
file attribution" remains.

Verified:
  - npx tsc --noEmit                         clean
  - C# + Python integration                  393/393 passing

* refactor(python-scope): remove as-unknown-as casts in scope-resolver (mirrors Unit 2)

Replay the C# scope-resolver cleanup on the Python side so both
providers share a single clean pattern:

  * Drop `ws as unknown as WorkspaceIndex` — `WorkspaceIndex` is
    `unknown` in the shared contract, so the narrow context assigns
    structurally without a cast.
  * Drop `{ id: scopeId } as unknown as Scope` — `pythonMergeBindings`
    never read the scope (the parameter was `_scope`), so the stub
    was a type-only ghost. Signature is now `(bindings)` and the
    LanguageProvider slot wraps with an arrow adapter.
  * Drop `allFilePaths as Set<string>` — the orchestrator hands a
    `ReadonlySet<string>`; we copy it into a `Set` at the resolver
    adapter so the legacy downstream `resolvePythonImportInternal`
    chain (typed for mutable `Set<string>`) keeps working. The copy
    is O(N) once per import, trivial cost.

Left intact on purpose: the `(callsite, def) → (def, callsite)`
arrow wrapper on `arityCompatibility`. That's a documented shape
difference between `LanguageProvider.arityCompatibility(def, callsite)`
and `ScopeResolver.arityCompatibility(callsite, def)`; both providers
(Python + C#) carry the same wrapper. Reconciling is a separate
refactor across both contracts.

No runtime behavior change.

Verified:
  - npx tsc --noEmit                              clean
  - Python + C# unit + integration suites         529/529 passing

* docs(scope-resolution): document I1-I8 invariants, source-of-truth, and same-graph guarantee

Promote contract knowledge that was implicit in code into the canonical docs
so future migrations and the next reviewer don't have to reverse-engineer it.

contract/scope-resolver.ts:
  * Migration cookbook lists every optional hook (was: only the two
    booleans), with one-line guidance per hook including when to enable
    `hoistTypeBindingsToModule`.
  * Contract Invariants I1-I7 are now spelled out in full (was: only
    I1/I3/I5 summarized with a pointer to a plan file). Added new I8
    "post-finalize hooks may mutate Scope.typeBindings and indexes.bindings;
    consumers must not freeze or snapshot before all post-finalize hooks
    have run".
  * New "Semantic-model source of truth" section: ParsedFile is the
    single semantic model; passes that need AST-level facts must reuse
    the orchestrator's treeCache rather than re-parse.
  * New "Same-graph guarantee" section: legacy DAG and scope-resolution
    emit indistinguishable edges (node identity, edge vocabulary,
    confidence). CI parity workflow enforces this.

gitnexus-shared/src/scope-resolution/parsed-file.ts:
  * Added "Source-of-truth invariant" pointer paragraph.

ARCHITECTURE.md (Coexistence section):
  * Updated migrated-language list (Python + C#).
  * Added "Same-graph guarantee" subsection.
  * Added "Semantic-model source of truth" subsection.
  * Filled in the ScopeResolver hook table with the five optional hooks
    that landed in this branch (unwrapCollectionAccessor,
    collapseMemberCallsByCallerTarget, populateNamespaceSiblings,
    hoistTypeBindingsToModule, fieldFallbackOnMethodLookup).
  * Added C# rows to the code-references table.

Verified:
  - npx tsc --noEmit                                 clean
  - C# + Python integration                          393/393 passing

* refactor(scope-resolution): consume SemanticModel as single authoritative store

Unify scope-resolution and legacy parse into one symbol index per the
industry pattern (Roslyn / tsc / rust-analyzer). Scope-resolution
passes now consume `SemanticModel.methods` / `SemanticModel.fields` /
`SemanticModel.symbols` for all symbol-keyed lookups. The legacy DAG
already read from these; the drift — two parallel owner-keyed indexes
populated by two writers with divergent ownerId semantics — is closed.

Changes:

  * `MethodRegistry.lookupAllByOwner(owner, name)`: new API returning
    every overload without arity narrowing. Powers `findOwnedMember` /
    `pickOverload`.

  * `pipeline/run.ts` reconciliation pass: after
    `provider.populateOwners(parsed)`, iterate `parsed.localDefs[i]`
    and register methods/fields into the SemanticModel under the
    corrected ownerId. Idempotent — skips defs already present under
    `(ownerId, simple)` by nodeId, so unmigrated languages whose
    legacy extractor already set ownerId (C#) don't double-register.
    Closes the Python gap where class-body methods were invisible to
    `MethodRegistry` because the legacy Python method extractor
    couldn't resolve `enclosingClassId` at parse time.

  * `WorkspaceResolutionIndex` slimmed to Scope-valued maps only
    (`classScopeByDefId`, `moduleScopeByFile`). Dropped `memberByOwner`,
    `membersByOwner`, `defsByFileAndName`, `callablesBySimpleName` —
    all symbol-keyed duplicates of SemanticModel indexes.

  * Walker helpers now consume SemanticModel:
      - `findOwnedMember(owner, name, model)` → methods then fields
        fallback (ACCESSES writes target Property/Variable defs too).
      - `findExportedDefByName` fallback walks every Module scope's
        `origin === 'local'` bindings via `index.moduleScopeByFile`
        (preserves the module-export-visibility filter that
        SymbolTable.fileIndex can't cheaply encode).
      - `findExportedDef` reads `moduleScope.bindings` directly.

  * `pickOverload` in receiver-bound-calls.ts falls back to
    `model.fields.lookupFieldByOwner` when method lookup returns empty,
    fixing ACCESSES write edges that receive a Property target.

  * `phase.ts` threads `resolutionContext.model` into
    `RunScopeResolutionInput`.

Boundary rule, enforced by file placement:
  - symbol-indexed lookups (key = nodeId / name / filePath) →
    `SemanticModel`
  - Scope-valued lookups (value = `Scope`) →
    `WorkspaceResolutionIndex`

Research synthesized from web-researcher + Explore + best-practices +
system-architect agents; canonical references: Roslyn Overview,
rust-analyzer architecture, stack-graphs paper.

Verified:
  - npx tsc --noEmit                               clean
  - C# + Python integration                        393/393 passing

* docs(scope-resolution): refresh comments after dropping duplicated indexes

Replace references to the now-deleted `memberByOwner` /
`callablesBySimpleName` index fields with comments that describe the
actual lookup path (`SemanticModel` registries + scope-tied module
bindings). Pure doc cleanup; no behavior change.

* feat(scope-resolution): extract reconciliation pass + add parity validator

Extract the SemanticModel reconciliation pass (previously inline in
`pipeline/run.ts`) into a dedicated module with:

  * `reconcileOwnership(parsedFiles, model)` — pure function returning
    stats (methodsRegistered / fieldsRegistered / skippedAlreadyPresent).
    Idempotent; safe to re-run.
  * `validateOwnershipParity(parsedFiles, model, onWarn)` — dev-mode
    runtime validator for Contract Invariant I9. Walks every def with
    an `ownerId` and asserts it is reachable via
    `model.methods.lookupAllByOwner` or `model.fields.lookupFieldByOwner`.
    Soft-fails via `onWarn`; never throws.

Validator is gated on both `NODE_ENV !== 'production'` and
`VALIDATE_SEMANTIC_MODEL !== '0'` so production incurs zero cost but
development surfaces any drift between `parsed.localDefs` ownership and
the registries.

12 new unit tests cover:
  * happy path: method, property, Variable registration
  * edge case: defs without ownerId are skipped
  * idempotency: second call is a no-op
  * coexistence: defs the legacy extractor already registered (via
    `model.symbols.add`) are skipped on reconcile
  * overloads: multiple methods under the same (owner, name)
  * validator: no warnings after reconciliation
  * validator: warns on drift
  * validator: no-op under NODE_ENV=production
  * validator: no-op when VALIDATE_SEMANTIC_MODEL=0
  * validator: warns on missing Property same as missing Method

Verified:
  - npx tsc --noEmit                               clean
  - reconcile-ownership unit tests                 12/12 passing
  - C# + Python integration                        393/393 passing

* refactor(scope-resolution): narrow handles + tighten required params

Two small hygiene fixes that fell out of the unified-model work:

  * Introduce `readonlyModel: SemanticModel` in `runScopeResolution`
    immediately after reconciliation so the write/read phase boundary
    is explicit at the code level. Downstream passes (receiver-bound,
    free-call) receive the narrowed `SemanticModel` rather than the
    `MutableSemanticModel` that only the reconciliation pass needs.
    The type system now rejects accidental writes in the read phase.

  * Make `emitFreeCallFallback`'s `workspaceIndex` parameter required.
    It's now always passed (every caller threads it through), and the
    `workspaceIndex?` guard was dead code. Also drops the `| undefined`
    branch from `pickConstructorOrClass` which no caller can hit.

No behavior change.

* docs(semantic-model): document unified single-source-of-truth invariant (I9)

Add Contract Invariant I9 to the ScopeResolver contract and write the
single-source-of-truth + write/read phase contract into both the
SemanticModel file-head and ARCHITECTURE.md.

Three landing points so the rule is reachable from every entry:

  * contract/scope-resolver.ts — new I9 entry in the Contract
    Invariants list: scope-resolution passes consult SemanticModel
    exclusively for symbol-keyed lookups; WorkspaceResolutionIndex is
    reserved for Scope-valued maps. Documents the two-phase write
    (legacy parse + reconcileOwnership) and the narrowed-handle read
    posture. Calls out the reconciliation shim as transitional.

  * model/semantic-model.ts — new "Single-source-of-truth invariant"
    and "Write / read phase contract" sections in the file-head.
    Three ordered write phases (parse → reconcile → attachScopeIndexes),
    then frozen for readers.

  * ARCHITECTURE.md § "Semantic-model source of truth" — expanded
    subsection covering both invariants (ParsedFile = AST truth,
    SemanticModel = symbol truth), the write/read phase diagram, and
    the reconciliation-shim rationale.

No code change.

* test(scope-resolution): rewrite workspace-index test for slimmed index

The test file previously asserted on \`defsByFileAndName\`,
\`callablesBySimpleName\`, and \`memberByOwner\` — fields removed when
symbol-keyed lookups moved to \`SemanticModel\`. Rewrite so the same
invariants are asserted via the authoritative consumers:

  * New WorkspaceResolutionIndex shape test (scope-only maps).
  * \`findExportedDef\` module-export visibility tests:
    - keeps top-level class and function defs.
    - excludes class-body Variable defs (MAX_USERS = 100).
    - excludes class methods from module-export lookup.
  * \`findExportedDefByName\` fallback excludes class methods when a
    same-named module function exists.
  * \`findOwnedMember\` via the reconciled SemanticModel finds Python
    class methods after populateOwners + reconcileOwnership.

Total assertions preserved: every invariant from the old test file is
still pinned; the assertion surface shifted from the index shape to
the walker helpers.

Verified:
  - workspace-index.test.ts                        8/8 passing

* fix(tests): update registry-primary-flag test for C# migration

The "returns exactly the flipped languages" case expected `enabled.size === 1`
after toggling Python off and Go on. After the C# migration lands C# in
MIGRATED_LANGUAGES, C# is default-on too — so the size is now 2 (Go + C#)
unless C# is also opted out.

Turn off C# alongside Python in the test setup. Added a comment noting
that future migrations must add their REGISTRY_PRIMARY_<LANG>='false'
line here.

* refactor(scope-resolution): address PR #1019 review findings

Resolves all 5 findings from the automated review on
feat/csharp-scope-resolution. Shared ingestion code stays
language-agnostic; C# (and every class-like language) benefits.

F1 [high] Broaden class-like predicate
  Hoist `isClassLike` in `scope/walkers.ts` to an exported top-level
  helper covering Class | Interface | Struct | Record | Enum | Trait.
  Use it in `findClassBindingInScope`, `findEnclosingClassDef`, and
  `buildWorkspaceResolutionIndex` so C# records, structs, interfaces,
  and enums participate in scope chains and receiver binding the same
  way Python classes do.

F2 [medium] Remove stale comment in csharp simple-hooks
  `csharpReceiverBinding`'s doc claimed this/base synthesis was
  "planned for a follow-up"; synthesis has been implemented in
  receiver-binding.ts since the migration landed. Rewrite the doc to
  describe the actual behavior (non-null TypeRef on instance-method
  bodies, null on static/free functions).

F3 [medium] O(1) reverse lookup for classScopeId -> classDefId
  Add `classScopeIdToDefId: ReadonlyMap<ScopeId, string>` to
  `WorkspaceResolutionIndex`, populated as the inverse of
  `classScopeByDefId`. Replace the O(C) linear scan in
  `pickImplicitThisOverload` (free-call-fallback.ts) with an O(1)
  `Map.get` — turns per-site reverse resolution from linear in class
  count to constant time for every free call.

F4 [low] Extract narrowOverloadCandidates shared utility
  New `passes/overload-narrowing.ts` centralizes the arity + argument-
  type narrowing previously duplicated across `pickOverload`
  (receiver-bound-calls.ts) and `pickImplicitThisOverload`
  (free-call-fallback.ts). Both callsites now share identical
  narrowing semantics; variadic `params T` handling is preserved.
  Return type is `readonly SymbolDefinition[]` with no defensive
  spreads (allocations saved on the hot path).

F5 [low] Merge unreachable Case 5 into Case 2
  `Case 5` in `receiver-bound-calls.ts` was dead code — `Case 2`
  pre-empted it for every static/class-name receiver. Delete Case 5
  and lift its kind-aware read/write ACCESSES reason/confidence logic
  into Case 2 so static-style member access (e.g. `Interface.Member`,
  `TypeName.StaticMember`) gets the correct edge metadata.

Tests
  - New unit tests for `narrowOverloadCandidates` covering empty
    input, arity filtering, variadic params, type narrowing, and
    fallback semantics.
  - New unit tests for `classScopeIdToDefId` verifying inverse
    invariant and empty index behavior.
  - New C# integration fixtures and tests:
      * csharp-record-base — record inheritance + `base.Save()`
      * csharp-struct-overloads — struct with implicit-this overload
        narrowing (pinned exact edge count under registry-primary)
      * csharp-interface-receiver-static — interface-qualified static-
        style call exercises the merged Case 2.
  - Full runs green:
      * scope-resolution unit: 406/406
      * csharp integration (registry-primary): 197/197
      * csharp integration (legacy DAG): 197/197
      * python integration (regression guard): 204/204

Chore
  - Add `.context/` to root `.gitignore` to prevent agent scratch
    files from being committed.

Made-with: Cursor

* test(csharp-scope-resolution): address adversarial review follow-ups on PR #1019

Applies the three actionable follow-ups from the post-commit adversarial
review of 5a1bce7f against DoD.md. No runtime code changes.

- [medium] Strengthen bounds-only assertion in the struct-overloads
  suite: `methods.length` is now pinned to `toBe(2)` and the arity list
  to `toEqual([1, 2])`. Fixture `csharp-struct-overloads/src/Calc.cs`
  declares exactly two `Add` methods, so a regression that adds, drops,
  or merges an overload will now fail the test instead of silently
  passing a `>= 2` gate.

- [low] Pin the merged Case 2 kind-aware branch (receiver-bound-calls.ts
  lines 257-289) with a dedicated fixture and three new assertions:
  `csharp-class-static-field-access/src/Counters.cs` exercises
  `ClassName.Field = value` where the receiver resolves via
  `findClassBindingInScope` (no typeBinding on `Counters`). The test
  verifies (a) two distinct ACCESSES writes are emitted from a single
  method (per-site dedup from graph-bridge/edges.ts:80-87),
  (b) `reason === 'write'`, (c) `confidence === 1.0`, and (d) no
  spurious CALLS edges are produced for the same sites. This is the
  semantic upgrade lifted from the deleted Case 5; without a pinning
  test a future revert of the kind-aware branch would silently drop
  back to `import-resolved`/`global` at 0.85 for the same sites.
  Read-side coverage is intentionally not asserted because the C#
  tree-sitter query currently emits only `write.member` captures
  (languages/csharp/query.ts:485-501) — a read counterpart would have
  no reference site today and would give a false sense of coverage.

- [info] Left the `?? overloads[0]` fallback in place at
  receiver-bound-calls.ts:450 unchanged. With the package's current
  tsconfig (strict: false, no noUncheckedIndexedAccess) both the
  defensive fallback and a `candidates[0]!` assertion type-check
  identically, so the finding has no production-readiness impact.
  Keeping the fallback minimizes churn.

Validation (local, Windows PowerShell):
- `npx prettier --check test/integration/resolvers/csharp.test.ts` -> clean
- `npx tsc --noEmit` -> 0 errors
- `REGISTRY_PRIMARY_CSHARP=1 npx vitest run test/integration/resolvers/csharp.test.ts` -> 200/200
- `REGISTRY_PRIMARY_CSHARP=0 npx vitest run test/integration/resolvers/csharp.test.ts` -> 200/200
- `npx vitest run test/integration/resolvers/python.test.ts` -> 204/204
- `npm test` (full gitnexus suite) -> 6967 passed, 6 pre-existing failures
  (4x Swift overload/dedup, 1x Swift method-extraction unit, 1x Swift
  type-env unit, 1x LadybugDB lockfile on Windows). All six reproduce on
  5a1bce7f with these follow-up changes stashed, confirming they are
  environment/baseline failures unrelated to this work. Swift is not in
  MIGRATED_LANGUAGES so the merged Case 2 path cannot affect it.

Refs: PR #1019
Made-with: Cursor

* refactor(scope-resolution): address full-PR review findings on PR #1019

Resolves the two remaining findings from the code-review-swarm full-PR
sweep (verdict: production-ready with minor follow-ups).

[low] Complete the csharp/index.ts module-layout JSDoc.

`languages/csharp/index.ts` is the discovery surface for the C# scope-
resolution module decomposition (per AGENTS.md). The "Module layout"
list silently omitted three load-bearing modules — `accessor-unwrap.ts`
(`.Values`/`.Keys` receiver-type unwrap), `namespace-siblings.ts`
(AST-driven cross-file implicit-namespace visibility), and
`receiver-binding.ts` (`this`/`base` type-binding synthesis). Extended
the JSDoc list so the "single-concern" decomposition story is honest
and the next contributor can locate the right file without grep.
No behavior change.

[info] Replace the non-standard `'scope-resolution: super-receiver'`
      edge reason with the canonical `'global'` tier.

`passes/receiver-bound-calls.ts` emitted a non-canonical reason string
for the super/base branch, which falls outside the vocabulary declared
in ARCHITECTURE.md § Scope-Resolution Pipeline (`'import-resolved' |
'global' | 'local-call' | 'same-file' | 'interface-dispatch' | 'read'
| 'write'`). Super/base calls resolve through the MRO chain rather
than through import directives, so the correct canonical tier is
`'global'` (same classification the legacy DAG's `toResolveResult`
applies to non-same-file, non-import-scoped resolutions).

Locked the contract with `rel.reason === 'global'` assertions on the
existing `csharp-super-resolution` and `csharp-generic-parent-
resolution` suites, both of which go through the super-branch MRO
path. The `csharp-record-base` suite intentionally does not pin a
reason (records don't currently emit EXTENDS edges, so the MRO lookup
misses and the edge is produced by the reference-index fallback
instead of the super-branch). A code comment flags the pre-existing
Python-legacy asymmetry (Python legacy tier classifier marks
`super()` as `'import-resolved'` because the ancestor arrives via an
`import` statement); closing that gap requires realigning the legacy
tier classifier and is tracked separately.

Validation:
- `npx tsc --noEmit` passes.
- `npx prettier --check` clean on all four touched files.
- `test/integration/resolvers/csharp.test.ts` — 200/200 under both
  `REGISTRY_PRIMARY_CSHARP=0` (legacy DAG) and `REGISTRY_PRIMARY_CSHARP=1`
  (registry-primary), preserving same-graph parity on the super branch.
- `test/integration/resolvers/python.test.ts` — 204/204 under both
  `REGISTRY_PRIMARY_PYTHON=0` and `=1`.
- `test/unit/scope-resolution/` — 406/406 passing.

Unstaged: `gitnexus/package-lock.json` (drift from `npm install` run
to resolve the pre-existing missing `jsonc-parser` dependency — not
part of this change).

Made-with: Cursor

* test(ci): raise integration-test timeouts so slow Windows runners stop flaking

The `windows-latest` CI runner for this branch was consistently failing
two integration suites in ways that had nothing to do with the PR's
scope-resolution changes:

  * `cli-e2e.test.ts` — `analyze command runs pipeline on mini-repo`
    hit the default 30 s vitest test timeout, which raced the test's
    own 30 s subprocess timeout and prevented the existing
    `if (result.status === null) return;` slow-CI tolerance from ever
    firing. That single timeout then cascaded into the downstream
    `cypher`/`query`/`impact` tests (which exited non-zero because the
    mini-repo was never indexed) and the `EPIPE handling` test.
  * `skills-e2e.test.ts` — `beforeAll` hooks run a full
    `runSkillsCli(tmpDir)` subprocess that analyzes a fixture repo and
    generates skills. 50 s was enough on Linux/macOS but not on slow
    Windows CPUs, producing "Hook timed out in 50000ms" errors and
    cascading test failures across every language describe block.

Fix:
  * Bump the `analyze` test's vitest test-level timeout to 60 s so it
    exceeds the 30 s subprocess timeout and the slow-CI tolerance can
    actually activate.
  * Bump all 12 `runSkillsCli`-driven `beforeAll` hooks from 50 s to
    120 s.

No production-code behavior changes. No change to what the tests
assert — only the per-test/hook wall-clock budget.

Made-with: Cursor
2026-04-23 12:38:13 +01:00
Sonu Verma
253f9cae37
feat(ingestion): make large-file skip threshold configurable (#1044)
* feat(ingestion): make large-file skip threshold configurable

The walker previously hardcoded a 512KB skip threshold, which silently dropped legitimate large source files (e.g. ~900KB hand-written Java service classes) during analysis with no way to override short of editing source.

Allow overrides via the GITNEXUS_MAX_FILE_SIZE env var (KB) — consistent with the existing GITNEXUS_NO_GITIGNORE / GITNEXUS_VERBOSE patterns — and a matching --max-file-size <kb> flag on gitnexus analyze.

- New utility getMaxFileSizeBytes() in core/ingestion/utils/max-file-size.ts parses the env var, falls back to the 512KB default for missing/invalid values, and clamps against TREE_SITTER_MAX_BUFFER (32MB) to keep the downstream parser safe.
- filesystem-walker.ts now resolves the threshold per call and drops the 'likely generated/vendored' editorial when the user has explicitly raised the limit.
- analyze CLI wires --max-file-size to the env var and echoes a one-line notice when the threshold is overridden, mirroring how --no-gitignore is handled.
- index.ts documents the new flag and env var under the analyze help text.
- Warnings for invalid or out-of-range values are emitted exactly once per distinct value to avoid log spam.

Tests:
- New test/unit/max-file-size.test.ts covers defaults, KB parsing, clamp-at-ceiling, invalid-input fallback + warn-once, and distinct-value warnings.
- test/integration/filesystem-walker.test.ts gains a 'large file skip threshold (#991)' block: 600KB fixture skipped by default, included under GITNEXUS_MAX_FILE_SIZE=1024, invalid values fall back and warn once, and the 'generated/vendored' suffix is only emitted under the default threshold.

Closes #991

* fix(cli): show effective clamped max-file-size in banner

Addresses the PR #1044 review finding: the startup banner printed the raw GITNEXUS_MAX_FILE_SIZE value rather than the clamped effective threshold, producing misleading telemetry when the value exceeded the 32 MB tree-sitter ceiling.

The banner is also suppressed when the effective threshold equals the default, removing log noise when operators explicitly set the value to the current default.

Extracted the logic into a new getMaxFileSizeBannerMessage() helper and pinned the behavior with unit tests covering default, raised override, invalid fallback, and above-ceiling clamp cases.
2026-04-23 11:07:37 +01:00
Ryanba
358e4b5542
fix(ingestion): Log skipped sequential parser languages (#1021)
* fix(ingestion): Log skipped sequential parser languages

* 修复: 对齐 GitNexus#1021 的 Prettier 格式
2026-04-23 08:50:38 +01:00
evolution
38db0244e8
fix(go): align worker CALLS source IDs for receiver methods (#1043) 2026-04-23 08:08:56 +01:00
azizur100389
e262dda35b
fix(cli): only match <!-- gitnexus:* --> markers at section position (#1041) (#1042)
`upsertGitNexusSection` in ai-context.ts uses `indexOf` to locate the
bounds of the GitNexus section in CLAUDE.md / AGENTS.md before
replacement. `indexOf` matches the first occurrence of the marker
anywhere in the file, including inline prose references in backtick-
quoted fragments mid-sentence.

The shipped CLAUDE.md contains exactly such a reference ("See the
`<!-- gitnexus:start --> … <!-- gitnexus:end -->` block in AGENTS.md
for the canonical MCP tools..."). Running `gitnexus analyze` on a
fresh install matches those inline markers as section delimiters and
replaces the prose between them with the full ~100-line injected
block, breaking the backtick and corrupting markdown for every user.

Fix: new private `findSectionMarkerIndex` helper that only matches
markers occupying their own line — preceded by `\n` or start-of-file,
followed by `\n` / `\r` (CRLF files) / end-of-file. `\r` is explicit
so CRLF-terminated sections on Windows (core.autocrlf = true) still
match. The generator always emits markers alone on their line, so
every legitimate section continues to update in place; only inline
prose references now fall through to the append branch, which leaves
existing content untouched.

Two new unit tests:
- #1041 regression — seed CLAUDE.md with the shipped inline prose
  line, run analyze twice, assert inline prose preserved verbatim
  and marker counts stay at 2/2 (1 inline + 1 section-position)
- CRLF handling — seed a CRLF file with inline prose + legitimate
  section, run analyze, assert section replaced in place, inline
  prose preserved, stale stub content removed

No destructive ops, no bypass flags, no new deps. Behaviour change
is strictly narrowing — files that previously updated correctly
still do; files that previously got corrupted now fall through to
the safer append branch.

Closes #1041.
2026-04-23 07:58:07 +01:00
Tom Hale
6618120f63
fix: preserve comments and config in opencode.json during setup (#998)
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* deps: add jsonc-parser for JSONC-safe config editing

* fix: use jsonc-parser to preserve comments in opencode.json during setup

- Add mergeJsoncFile() using parseTree/modify/applyEdits pipeline
- Add getOpenCodeMcpEntry() for OpenCode MCP format { type: local, command: [...] }
- Replace readJsonFile+writeJsonFile in setupOpenCode with mergeJsoncFile
- Fix wipe bug: JSON.parse on JSONC comments caused catch block to reset config to {}
- Add 9 tests for JSONC comment preservation, corrupt file safety, and format

* fix: use parseTree error collection and detect indentation

- Pass parseErrors array to parseTree() instead of checking
  (tree as any).errors which was always undefined — a real bug
  that allowed corrupt files to be rewritten
- Detect tab indentation from file content to avoid mixed
  indentation in modified JSONC files
- Fix JSDoc to match actual fallback behavior (JSON.parse, not
  readJsonFile)
- Strengthen corrupt-file test to assert exact content match

* style(setup): fix prettier formatting on mergeJsoncFile

* fix(setup): remove dead JSON.parse fallback, detect space-indent width, fix JSDoc

- Remove the semantically unreachable JSON.parse fallback branch in
  mergeJsoncFile (jsonc-parser's parseTree is a strict superset of
  JSON.parse, so the fallback can never fire for content JSON.parse
  would accept)
- Replace binary tab/space detection with detectIndentation() that
  measures actual indent width from the first indented line
- Fix JSDoc: 'valid JSON that is not valid JSONC' is impossible by
  definition
- Add tests for tab indentation and 4-space indentation preservation
2026-04-22 17:21:56 +01:00
Copilot
962f22482b
feat(cli): Fingerprint indexed repos by remote URL to detect sibling-clone graph drift (#982)
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* Initial plan

* feat: detect sibling-clone graph drift via remote URL fingerprint

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* test: address review feedback — fake commit, same-commit case, regex docs

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* fix(mcp): address review feedback — CI green, perf, dead branch, one-shot test

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* Merge branch 'main' into copilot/fix-single-path-indexing-issue

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* Merge branch 'main' into copilot/fix-single-path-indexing-issue

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* style: prettier format run-analyze.ts after merge with main

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* test: realpath both sides of cwdGitRoot assertion for Windows 8.3 short-name compat

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* fix(test): use path-agnostic assertion for cwdGitRoot on Windows (#1015)

git rev-parse --show-toplevel returns long path names on Windows
while os.tmpdir() returns 8.3 short names. fs.realpathSync does not
expand short names, so exact path comparison always fails on Windows
CI runners. Replace with behavioral assertions instead.

---------

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Co-authored-by: evolution <wjc163@sina.cn>
2026-04-21 21:58:54 +01:00
Sam Fakhreddine
95a38c7e2d
fix(group): surface friendly error when group name not found (#903 regression test) (#989)
* fix(group): surface friendly error when group name not found

Squashed commits:
- test(csharp): add #903 regression — parse completeness for single-file C# repo
- fix(group): add GroupNotFoundError guard to groupList + re-throw tests for groupQuery/groupStatus
- fix(test): restore section comments in csharp.test.ts stripped during rebase

* fix(group): catch GroupNotFoundError explicitly in groupContext and groupImpact
2026-04-21 15:52:36 +01:00
Copilot
ff4ae89aaa
feat(python): scope-based call resolution + registry-primary flip + perf + generalization (RFC #909 Ring 3) (#980)
* Initial plan

* plan: Python scope-based resolution migration

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* feat(python): scope-based resolution provider hooks + 62 tests

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* refactor(python): split scope-hooks monolith into focused modules

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* test(python): integration-style scope-resolution tests + suffixResolve fallback

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* wire python scope-based resolution end-to-end (initial pass)

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* keep legacy IMPORTS for python (heritage needs importMap), scope phase owns CALLS only

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* test(python): remove parallel scope-resolution integration test

The new test/integration/python-scope-resolution.test.ts duplicated coverage
the reviewer explicitly rejected. The existing
test/integration/resolvers/python.test.ts (191 tests, driven by
runPipelineFromRepo) is the source of truth for Ring 3 parity.

Also document the IMPORTS-emission follow-up gap: wiring emitImportEdges
in python-scope-emit.ts today regresses 10 IMPORTS-edge fixtures because
the scope-extractor's ImportEdge coverage is narrower than legacy
pythonImportConfig.importResolver. Tracked as a follow-up.

Baseline with REGISTRY_PRIMARY_PYTHON=1 is unchanged: 109/191 pass.

* feat(ingestion): scope-resolution phase owns Python IMPORTS edges (RFC #909 Ring 3)

When `REGISTRY_PRIMARY_PYTHON=1`, IMPORTS graph edges for Python files are now
emitted exclusively by the new scope-resolution path. The legacy
`import-processor` still runs — heritage resolution needs its importMap /
namedImportMap / moduleAliasMap population — but its graph edge emission is
gated per-language so Python no longer double-emits.

This closes the reviewer's second change request on PR #980: "the legacy path
must be turned off". Legacy IMPORTS edges for Python are now off by default
when the flag is enabled.

Three bugs were fixed to make the new path's coverage match legacy:

1. **Root-file bailout** (import-resolvers/python.ts): `resolvePythonImportInternal`
   returned null immediately when the importer file lived at the repo root
   (importerDir === ''). The ancestor directory walk further down already
   handles this case correctly; the early return was the bug. Proximity check
   now only runs when importerDir is non-empty, and the ancestor walk sees
   root-level files for the first time.

2. **External dotted imports** (languages/python/import-target.ts): the new
   path fell straight through to `suffixResolve` for multi-segment imports,
   which happily matched `django.apps` to a local `accounts/apps.py`. Mirror
   `pythonImportStrategy`'s `hasRepoCandidate` guard — suffix-match only when
   the leading segment exists somewhere in-repo as a package, __init__.py,
   or namespace directory.

3. **suffixResolve ambiguity** (languages/python/import-target.ts): the
   shared `suffixResolve` helper requires a pre-built `SuffixIndex` to
   disambiguate ties. Without one it falls back to an O(files) scan that
   silently picks the first match when the last segment collides across
   directories (e.g. `accounts.models` matching `billing/models.py`).
   Replaced with `resolveAbsoluteFromFiles` — exact lookup first, then a
   deterministic suffix match.

Validation:
- Flag OFF: 191/191 pass (no regression).
- Flag ON: 109/191 pass (82 fail — exact baseline match; remaining 82 are
  unchanged CALLS-edge provider-feature gaps tracked as Phase B follow-ups).
- `tsc --noEmit`: clean.

The 82 CALLS failures cluster into 44 describe blocks covering type-inference
features (assignment chains, walrus, class-level annotations, constructor
inference, C3 MRO, overload dispatch, return-type inference) that need
dedicated Ring 3 follow-up work. Each cluster is tracked against the RFC #909
shadow-parity gate (>=99% fixtures / >=98% corpus) in the per-language ticket.

* ci(scope-resolution): automatic parity gate driven by MIGRATED_LANGUAGES

Adds the Ring 3 parity gate the RFC §6.4 requires: when a language's
scope-resolution migration is marked complete, CI runs its resolver
integration test twice on every PR (once with the legacy DAG, once with
the registry-primary path) and both must pass.

The "is this language migrated" signal is a single TypeScript constant:

  // gitnexus/src/core/ingestion/registry-primary-flag.ts
  export const MIGRATED_LANGUAGES: ReadonlySet<SupportedLanguages> =
    new Set([ /* SupportedLanguages.Python when ready */ ]);

Adding a language here has three simultaneous effects:

  1. `isRegistryPrimary(lang)` defaults to true for that language in
     production (env-var override still wins if set explicitly).
  2. `.github/workflows/ci-scope-parity.yml` auto-discovers the set via
     `npx tsx scripts/ci-list-migrated-languages.ts`, builds a parity
     matrix, and runs:
       - `REGISTRY_PRIMARY_<LANG>=0 npx vitest run resolvers/<slug>.test.ts`
       - `REGISTRY_PRIMARY_<LANG>=1 npx vitest run resolvers/<slug>.test.ts`
     Both legs must pass for the job to succeed.
  3. Legacy-path gating in call-processor.ts / import-processor.ts kicks
     in automatically through the same `isRegistryPrimary` lookup.

No JSON registry, no manual workflow edit, no second source of truth —
contributors update the Set and CI picks it up. Empty Set = parity job
is a skipped matrix (workflow still reports success).

The new `scope-parity` reusable workflow is added to ci.yml's `needs`
graph and ci-status gate. Its result must be `success` (skipped would
mean upstream discover job failed and should block).

Validation (with empty MIGRATED_LANGUAGES set):
- flag OFF: 191/191 pass (no behavior change)
- flag ON (manual REGISTRY_PRIMARY_PYTHON=1): 82 fails = baseline exact match
- `npx tsc --noEmit`: clean
- concurrency-convention script: pass
- tsx discovery script: emits `[]` correctly

* ci(scope-resolution): keep MIGRATED_LANGUAGES empty; fix linter auto-uncomment

Previous commit's example entry got auto-uncommented (linter preferred a
type-checkable `SupportedLanguages.Python` over a commented-out reference).
That would have triggered the parity CI gate against Python, which today
has 82 known flag-on failures — unintended and would block the PR.

Use the explicit generic `new Set<SupportedLanguages>([])` so an empty set
still type-checks without needing an uncommented-out sample member.
Example in the comment now has `//   SupportedLanguages.Python,` so it
remains illustrative without participating in the set.

* feat(python): capture constructor-inferred + annotated type bindings

Extends the Python scope-extractor with two new type-binding capture
patterns so receiver-typed method dispatch has concrete type bindings
to work from:

1. `u: User = ...` / `u: User` — variable annotations. `@type-binding.annotation`
   anchor, `source: 'annotation'`.
2. `u = User("alice")` — assignment RHS is a bare-identifier call (Python
   has no `new` keyword; constructor-shaped calls are syntactically
   identical to function calls). `@type-binding.constructor` anchor,
   `source: 'constructor-inferred'`.

The runtime query lives in `query.ts` (the `.scm` file is documentation
per the comment at its top); both are updated.

Fixes 19 failures across these resolver fixtures (flag-on 82 → 63):
- Python constructor-inferred type resolution (3)
- Python class-level annotation resolution (3)
- Python nullable receiver resolution (3)
- Python member-call / receiver-constrained / constructor-call (3)
- Python assignment chain propagation (2)
- Python walrus / match-case / chained method (3)
- Python member access iterable for-loop (2)

* feat(python): strip nullable unions + prefer annotations over inference

Two linked changes that together fix the 4 nullable-receiver tests:

1. `stripNullable` in Python's `interpretTypeBinding` unwraps `User | None`,
   `None | User`, and `Optional[User]` to `User`, so receiver-typed
   resolution treats nullable receivers identically to non-nullable ones.
   Three-arm unions (`User | Error | None`) are left unchanged — truly
   ambiguous for single-receiver inference.

2. Source-strength ordering in `pass4CollectTypeBindings`. When multiple
   matches fire for the same bound name in the same scope — e.g. the
   `u: User = find()` idiom where both the annotation and
   constructor-inferred patterns match — the explicit annotation now
   wins regardless of query-match arrival order. Rank:
     explicit (annotation / parameter-annotation / return-annotation / self) > inferred

Also reorders the two Python patterns in query.ts / scopes.scm so the
constructor-inferred pattern appears first — a belt-and-braces fallback
that keeps behavior deterministic if the shared priority ranking is ever
revisited.

Fixes 4 failures (flag-on 63 → 59):
- Python nullable receiver resolution (4 tests)

Flag-off regression check: 191/191 still pass.

* feat(python): walrus, qualified-call, match-case type bindings

Extends the constructor-inferred family of captures with three more
assignment-shaped patterns that all bind a variable to a class-like type:

- Walrus: `(u := User(...))` → `u: User` via `(named_expression)`.
- Qualified call RHS: `u = models.User(...)` → `u: models.User` via
  `(attribute)` node .text. Falls through resolveTypeRef Phase 2
  (QualifiedNameIndex dotted fallback).
- Match as-pattern: `case User() as u:` → `u: User` via `(as_pattern)`
  + `(class_pattern (dotted_name))`.

Fixes 2 failures (flag-on 59 → 57):
- Python walrus operator type inference
- Python match/case as-pattern type binding

Qualified-call constructor tests still fail because they require
cross-module qualifiedName registration (models.User → models.py's User
class) which isn't yet wired in the Python extractor. Tracked as
follow-up alongside module-import CALLS (#337) resolution.

* feat(python): chain type bindings + strip list[T] generic for for-loop

Adds two capture patterns and a shared transitive-closure pass that
together handle Python's variable-aliasing and for-loop-over-typed-
iterable patterns:

1. `(assignment left: (identifier) right: (identifier))` — `alias = u`.
2. `(for_statement left: (identifier) right: (identifier))` — `for u in users`.

Both emit `@type-binding.alias` with the RHS identifier as rawName. The
shared `pass4CollectTypeBindings` now runs a final transitive-closure
walk that follows identifier-chain TypeRefs through the declaring scope
and its ancestors (depth-capped, cycle-guarded) so `alias` ultimately
points at the class type instead of another local variable name.

Generic stripping in `interpret.ts` unwraps single-arg collection
wrappers — `list[User]`, `set[User]`, `Iterable[User]`, etc. — to the
element type. Multi-arg generics (`dict[str, User]`, `Callable[...]`)
are left alone; their semantics aren't unambiguous.

Fixes 8 failures (flag-on 57 → 49):
- Python assignment chain propagation (4)
- Python nullable + assignment chain (2)
- Python walrus operator (:=) assignment chain (2)

Flag-off still 191/191.

* feat(python): namespace & class receiver resolution + file-level caller fallback

Adds a Python-specific post-resolution pass `emitReceiverBoundCalls`
that closes two receiver gaps the shared `MethodRegistry.lookup` doesn't
cover:

1. **Namespace receivers** — `import models; models.User()` /
   `import models as m; m.User()`. The shared `lookupReceiverType` only
   walks `scope.typeBindings`; namespace imports never land there
   (they're filtered out of `scope.bindings` when the target module
   has no self-named def, per `finalize-algorithm.ts:540`). The new
   pass walks `indexes.imports` directly, builds a per-file
   `localName → targetFilePath` map, and emits CALLS/ACCESSES edges
   against the target file's `localDefs`.

2. **Class-name receivers** — `Dog.classify("dog")`. The shared resolver
   requires typeBindings; class bindings in `scope.bindings` are never
   consulted as receivers. The new pass checks class-kind bindings in
   the call scope's chain and resolves members via `ownerId`.

Also fixes module-level call attribution: `resolveCallerGraphId` now
falls back to the File node id (`generateId('File', filePath)`) when no
enclosing function/method/class is found. Matches legacy DAG behavior
for module-scope calls like `u = models.User()` at the top of app.py.

Fixes 4 failures (flag-on 49 → 45):
- Python module import CALLS resolution (Issue #337) (4 of 7)

Flag-off still 191/191.

* feat(python): dotted-typebinding receiver resolution

Adds case 3 to `emitReceiverBoundCalls`: when a receiver's typeBinding
has a dotted rawName like `u: models.User` (the constructor-inferred
form fired by `u = models.User(...)`), walk the namespace map + target
file's defs to find the class, then look up the member via ownerId.

`resolveTypeRef`'s QualifiedNameIndex fallback can't cover this because
the target class's qualifiedName in models.py is just `"User"`, not
`"models.User"` — the dotted form only exists in the call-site file's
receiver expression. This pass bridges that gap without modifying the
shared registry.

Fixes 9 more failures (flag-on 45 → 36):
- Python qualified constructor inference (2)
- Python module import CALLS resolution (Issue #337) (3)
- (cluster overlap — several downstream tests in assignment/nullable/
  walrus that propagate through qualified-ctor bindings also benefit)

Flag-off still 191/191.

* feat(python): consult finalized bindings for receiver resolution

`findClassBindingInScope` now walks BOTH:
  1. `scope.bindings` — pre-finalize local declarations (origin: 'local')
  2. `indexes.bindings` — post-finalize cross-file imports/namespaces

Without (2) we were blind to any class brought in via
`from models import Dog` at the call site's file, because the
scope-extractor's Pass 2 only populates local bindings and the
cross-file finalize produces a separate bindings map that never lands
on `scope.bindings`.

Case 2 (`Dog.classify()`) now walks MRO so inherited static/class
methods resolve — `Dog.classify()` where `classify` lives on `Animal`.

Case 4 (simple typeBinding like `u: U` from aliased import) now uses
`findClassBindingInScope` instead of the shared `resolveTypeRef`,
because `resolveTypeRef`'s `ctx.scopes` only sees pre-finalize local
bindings too.

Fixes 4 more failures (flag-on 36 → 32):
- Python method enrichment > Dog.classify static (1)
- Python static/classmethod class-as-receiver (2)
- Python alias import resolution (1)

Flag-off still 191/191.

* refactor(python-scope): extract language-agnostic emit-core/

Unit 1 of the python migration architectural plan
(docs/plans/2026-04-19-001-refactor-python-migration-architectural-plan.md).

Splits python-scope-emit.ts (~945 → 481 lines) by lifting 14 generic
graph-feeding primitives into emit-core/:
  - graph-node-lookup, graph-id, emit-edge
  - emit-references, emit-imports
  - scope-walkers (findReceiverTypeBinding, findClassBindingInScope,
    findOwnedMember, findExportedDef)
  - namespace-targets, method-dispatch-bridge

Each file carries a "Next-consumer contract" JSDoc so future language
migrations (TS #927, JS #928, Java, Kotlin, Ruby) import from emit-core
rather than re-implementing. python-scope-emit.ts keeps only the four
Python-specific pieces: runPythonScopeResolution (orchestrator),
buildPythonMro, emitReceiverBoundCalls (4 cases), populateMethodOwnerIds
— these move to languages/python/emit/ in Unit 11.

Pure refactor, zero behavior change:
  - flag-off: 191/191 python.test.ts pass (identical baseline).
  - flag-on (REGISTRY_PRIMARY_PYTHON=1): 32 fail / 159 pass (identical
    baseline — the refactor neither fixes nor regresses any test).
  - tsc --noEmit clean.

* feat(python-scope): arity metadata + bind function decls in parent scope

Unit 2 of the python migration architectural plan
(docs/plans/2026-04-19-001-refactor-python-migration-architectural-plan.md).

Two changes that the registry-primary path needs before any of the
arity-sensitive failures can move:

1. Arity metadata on scope-extracted Function/Method defs.
   - New helper `languages/python/arity-metadata.ts` reuses
     `pythonMethodConfig.extractParameters` so self/cls stripping,
     defaults, and *args/**kwargs detection match legacy semantics.
   - `emit-captures.ts` synthesizes
     `@declaration.parameter-count` /
     `@declaration.required-parameter-count` /
     `@declaration.parameter-types` captures on every
     `@declaration.function` match.
   - Generic `scope-extractor.ts buildDefFromDeclarationMatch` reads
     the three optional captures into `SymbolDefinition`. Absence is
     still the no-op default for non-Python providers.

2. Hoist function/class declaration bindings to the enclosing scope.
   The "innermost scope containing the anchor" default placed
   `def greet(...)` inside greet's OWN body — invisible to other
   module-level callers, so every flag-on free-call resolved to
   `unresolved`. The hoist condition (`anchor range == innermost
   range`) only fires for scope-creating declarations, so variable /
   for-loop captures whose anchor is a child identifier stay put.
   Hooks can still override via `bindingScopeFor`.

Verification:
  - Flag-off: 191/191 (identical baseline).
  - Flag-on (REGISTRY_PRIMARY_PYTHON=1): 31 fail / 160 pass
    (was 32/159; the hoist unblocks free-call resolution end-to-end).
  - tsc --noEmit clean.

Per-(source,target) edge collapse for multi-call-site cases
(default-params, variadic) still pending — landing it without
regressing the static-method find_user fixture (which expects two
distinct edges through different targets) needs the ownership-aware
qualified-id work that lands with Unit 4 / Unit 11.

* feat(python-scope): capture function return-type annotations

Unit 3 of the python migration architectural plan
(docs/plans/2026-04-19-001-refactor-python-migration-architectural-plan.md).

Wires the `def get_user() -> User` return-type annotation into the
typeBindings stream so the existing constructor-inferred + transitive
chain machinery can resolve `u = get_user(); u.save()` to `User#save`
without any orchestrator change.

Changes:
- `query.ts` + `scopes.scm`: new `@type-binding.return` pattern keyed by
  the function name (matches RFC §5.1 canonical vocabulary).
- `interpret.ts`: maps `@type-binding.return` to the existing
  `'return-annotation'` source label (no shared change needed).
- `scope-extractor.ts pass4CollectTypeBindings`: extends the Pass 2
  auto-hoist (anchor range == innermost scope range → bind in parent)
  to type bindings as well — return-type bindings whose anchor IS the
  function_definition land in the function's enclosing scope so
  callers see them.

Same-file return-type inference is now end-to-end:
  `def get_user() -> User: ...` + `u = get_user()` produces
  `u: User (return-annotation)` in the caller's scope via
  `followChainedRef`.

Verification:
- Flag-off: 191/191 (identical baseline).
- Flag-on: 31 fail / 160 pass (no change — every remaining
  return-type test in this fixture set is *cross-file*; carrying
  `get_user → User` across module boundaries lands with the
  cross-file typeBinding propagation work in Unit 5/7).
- tsc --noEmit clean.

* feat(python-scope): resolve dotted receivers via class-scope field types

Unit 4 partial — the dotted-receiver case (`user.address.save()`).

Class-body annotations like `class User: address: Address` already
land in the class scope's typeBindings via the existing
`@type-binding.annotation` capture. This commit consumes that signal:

- Build a `Map<classDefId, Scope>` from every parsed file's class
  scopes once per resolution pass.
- New Case 0 in `emitReceiverBoundCalls`: when the receiver's name
  contains a dot, walk the chain — resolve the head's type, then for
  each remaining segment look up that field's type in the owner
  class's scope.typeBindings, then emit the call against the final
  class with MRO walk.
- Cross-scope lookups use each TypeRef's `declaredAtScope` so an
  imported `Address` resolves in the file that owns the field
  declaration, not the file holding the call site.

Verification:
- Flag-off: 191/191 (identical baseline).
- Flag-on: 29 fail / 162 pass (was 31/160; both `Field type
  resolution` fixtures now pass — same-file and cross-file disambig).
- tsc --noEmit clean.

Remaining Unit 4 work (write ACCESSES, `self.X` for-loop iteration)
needs Unit 6's tuple/iterable destructuring before it can land —
`for u in self.users` requires the iterable typing path.

* feat(python-scope): chain receiver via call-expression return types

Unit 5 — extends the compound-receiver case to handle call-expression
receivers (`svc.get_user().save()`).

`resolveCompoundReceiverClass` is the single recursive entry point for
all compound receivers. Three shapes:
  - bare identifier — typeBinding chain
  - dotted `obj.field[.field]…` — class-scope field types
  - call `expr.method()` — recurse into expr, look up method's
    return-type typeBinding on its class scope

Method return-type bindings auto-hoist to the parent (class) scope per
Unit 3, so `methodClassScope.typeBindings.get(methodName)` is the
canonical lookup. Free-call return types (`get_user()`) walk the
caller's scope chain.

Depth-capped at 4 hops to bound recursion.

Verification:
- Flag-off: 191/191 (identical baseline).
- Flag-on: 28 fail / 163 pass (was 29/162; `Python chained method
  call resolution` now passes).
- tsc --noEmit clean.

Two related tests (`city.save() via method chain`, `c.greet().save()
depth-2 MRO`) still fail because the captures yield typeBindings
shaped like `city → user.get_city` (no trailing parens — the capture
grabs the attribute text). Resolving those needs a follow step that
detects the call-shape rawName and feeds it through the compound
recurser. Lands with the chain-typeBinding work in a follow-up.

* feat(python-scope): free-call fallback consults finalized bindings

Unit 7 — closes the cross-file free-call gap.

The shared `MethodRegistry.lookup` walks `scope.bindings` (pre-finalize
local-only) for free-call resolution. Cross-file imports land in
`indexes.bindings` (post-finalize). Without the dual-source lookup,
`from x import f; f()` resolves to "unresolved" and no CALLS edge is
emitted.

Two changes:

- `emit-core/scope-walkers.ts`: new `findCallableBindingInScope` —
  same dual-source pattern as `findClassBindingInScope`, but accepts
  Function/Method/Constructor. Promoted to emit-core because every
  language with cross-file imports needs the same lookup.
- `python-scope-emit.ts emitFreeCallFallback`: post-pass that walks
  every free-call reference site, looks up the callee with the new
  helper, and emits via `tryEmitEdge`. Pre-seeds `seen` from the
  shared resolver's emissions so we never double-count.

Verification:
- Flag-off: 191/191 (identical baseline).
- Flag-on: 22 fail / 169 pass (was 28/163; +6 tests including
  the Python overload dispatch fixtures, ancestor-directory imports,
  and same-name module-alias collision).
- tsc --noEmit clean.

* feat(python-scope): super() receiver dispatches up the MRO

Unit 8 — `super().method()` inside a class method walks the enclosing
class's MRO chain (skipping self) and resolves to the first ancestor
that owns the method.

New receiver branch in `emitReceiverBoundCalls` recognizes
`super(...)` syntactically (regex-cheap), finds the enclosing class
via a new `findEnclosingClassDef` scope-walk helper, then re-uses
`scopes.methodDispatch.mroFor` + `findOwnedMember` from the existing
class-receiver path. Handled before the compound-receiver case so
`super()` doesn't fall into the bare-identifier branch where `super`
isn't a binding.

Verification:
- Flag-off: 191/191 (identical baseline).
- Flag-on: 21 fail / 170 pass (was 22/169; `super().save() inside
  User to BaseModel.save` now passes).
- tsc --noEmit clean.

* feat(python-scope): suppress shared resolver on member-call sites

Unit 9 — `app_metrics.get_metrics()` (namespace import alias) was
emitting two CALLS edges: a wrong self-call from the shared
resolver's free-call fallback, plus the correct namespace-receiver
edge from the Python post-pass.

Mechanism:

- `emit-core/emit-references.ts`: new optional `skipSites` parameter
  (`Set<string>` of `${filePath}:${line}:${col}` keys). When supplied,
  references at those positions are skipped — the provider has
  already emitted (or chosen not to emit) for that site.
- `python-scope-emit.ts`: reorders Phase 4 — receiver-bound + free-
  call fallback run FIRST, populating `handledSites`. The shared
  `emitReferencesViaLookup` then runs with that set so the resolver's
  fallback can't fight a precise per-receiver emission. Site keys are
  added only on successful tryEmitEdge (not for sites the post-pass
  saw but couldn't resolve — those still get a chance from the shared
  path).

Verification:
- Flag-off: 191/191 (identical baseline).
- Flag-on: 20 fail / 171 pass (was 21/170; same-name module-alias
  collision now resolves correctly).
- tsc --noEmit clean.

* feat(python-scope): propagate return-type bindings across imports

Closes the cross-file return-type propagation gap that left tests
like `u = get_user(); u.save()` (where get_user lives in another
file) with `u` typed as the function name instead of its return type.

The shared finalize pass copies callable bindings (`from x import f`
puts `f` in the importer's bindings) but typeBindings stay file-local
because they live on `Scope.typeBindings`, not on the index. Mutate
post-finalize:

- For each module-scope import binding (`origin: 'import'` or
  `'reexport'`), look up the source file's module-scope typeBinding
  for the def's simple name. If present (return-annotation source),
  mirror it under the importer's local alias. Skip when the importer
  already has its own typeBinding for the name (explicit local always
  wins).
- After propagation, re-run a chain-follow on every scope's
  typeBindings — pass-4 ran before propagation and missed any chain
  whose terminal lived in a foreign file. Same algorithm as
  `followChainedRef` in scope-extractor, but operates on the
  finalized scopes so propagated entries are visible.

Mutating `Scope.typeBindings` is safe — `draftToScope` constructs a
plain `new Map(...)`, not a frozen one.

Verification:
- Flag-off: 191/191 (identical baseline).
- Flag-on: 16 fail / 175 pass (was 20/171; +4 — both cross-file
  return-type tests, plus two related propagation cases).
- tsc --noEmit clean.

* feat(python-scope): for-loop call-iterable typeBinding

Adds `(for_statement left: (identifier) right: (call function:
(identifier)))` to the typeBinding capture set. Combined with Unit 3's
return-type capture and the cross-file return-type propagation pass,
this makes `for u in get_users(): u.save()` resolve to `User.save`
even when `get_users` is imported from another module.

Captured as `@type-binding.alias` (rawName = function identifier,
without parens) so the existing chain-follow walks the alias to the
function's return-type binding without any new code path.

Verification:
- Flag-off: 191/191 (identical baseline).
- Flag-on: 12 fail / 179 pass (was 16/175; +4 for-loop call-iterable
  tests across get_users / get_repos fixtures).
- tsc --noEmit clean.

* feat(python-scope): collapse free-call edges per (caller, target)

Free calls (no explicit receiver) now emit a single CALLS edge per
(caller, target) pair regardless of how many call sites the caller
contains. Mirrors the legacy DAG's per-pair dedup contract — what
the `default-params`, `variadic`, and `overload` fixtures expect.

Member calls keep position-based dedup so distinct resolved targets
(e.g. UserService.find_user vs AdminService.find_user from the same
caller) still produce distinct edges.

Implementation: bypass `tryEmitEdge` (which dedupes positionally) and
hand-roll the relationship with a position-independent rel.id
(`rel:CALLS:<caller>-><target>`). Site handling is now unconditional —
even when the dedup-collapse skips the actual emit, we mark the site
handled so the shared `emit-references` doesn't fight us with its
fallback.

Verification:
- Flag-off: 191/191 (identical baseline).
- Flag-on: 10 fail / 181 pass (was 12/179; +2 — both `default
  parameter arity` tests now pass).
- tsc --noEmit clean.

* fix(python-scope): match legacy CALLS reason for import-resolved free calls

The arity-narrowing test asserts \`rel.reason === 'import-resolved'\`
for cross-file free-call edges. Switch the free-call fallback's
reason to mirror legacy DAG semantics:
  - target-file !== source-file → 'import-resolved'
  - same file                   → 'local-call'

Verification:
- Flag-off: 191/191 (identical baseline).
- Flag-on: 9 fail / 182 pass (was 10/181; +1 arity-narrowing test).
- tsc --noEmit clean.

* fix(python-scope): drop dead pre-seeding from receiver-bound pass

The pre-seeding loop at the top of \`emitReceiverBoundCalls\` populated
\`seen\` with every reference the shared resolver had already resolved.
That was useful when emit-references ran FIRST. After Unit 9 reversed
the order (emit-references runs after the Python passes and uses
\`handledSites\` to skip what we processed), the pre-seed only causes
harm: when an MRO walk in Case 0 (compound receiver) and Case 4
(simple typeBinding) both touch the same site at the same position
but resolve to different targets, the pre-seed suppresses the second
emission because the shared resolver had already entered the wrong
target into \`seen\`.

Concrete case: \`c.greet().save()\` — Case 0 emits the outer save edge
to Greeting.save; Case 4 then resolves the inner \`c.greet()\` to
A.greet via MRO walk. With pre-seed both edges should emit (different
targets, different rel.ids); without removing the pre-seed the inner
emission was being deduped against an already-seeded entry and the
A.greet edge was lost.

Verification:
- Flag-off: 191/191 (identical baseline).
- Flag-on: 8 fail / 183 pass (was 9/182; +1 — \`c.greet() to A#greet
  via MRO walk\` now passes).
- tsc --noEmit clean.

* feat(python-scope): enumerate(X) for-loop tuple destructuring

Adds two new typeBinding capture patterns for the canonical enumerate
pattern:

  for (i, u) in enumerate(users): ...   ; tuple_pattern
  for  i, u  in enumerate(users): ...   ; pattern_list

Both bind the second tuple element (u) to the iterable identifier
(users). The chain-follow then unwraps users → its element type via
the existing generic-strip in interpret.ts (List[User] → User).

The #eq? predicate scopes the pattern to enumerate specifically;
generic tuple destructuring of arbitrary callables is left to a
future iteration once we have a richer signal for "what does this
call yield".

Verification:
- Flag-off: 191/191 (identical baseline).
- Flag-on: 7 fail / 184 pass (was 8/183; +1 — `parenthesized tuple:
  for (i, u) in enumerate(users)` now passes).
- tsc --noEmit clean.

* feat(python-scope): dict.items() value-type unwrapping

Two changes that together resolve `for k, v in data.items(): v.save()`:

- `interpret.ts stripGeneric`: extends to `dict[K, V]` /
  `Dict[K, V]` / `Mapping[K, V]` etc., stripping to the value type V.
  Previously only single-arg generics (list[User] → User) were
  stripped; multi-arg ones returned the raw text.
- `query.ts` + `scopes.scm`: new typeBinding patterns for
  `for k, v in X.items()` (both pattern_list and tuple_pattern). The
  second tuple element binds to X; the chain-follow then unwraps X's
  dict annotation to V via the new stripGeneric branch.

Verification:
- Flag-off: 191/191 (identical baseline).
- Flag-on: 6 fail / 185 pass (was 7/184; +1 — `dict.items() loop`
  test now passes).
- tsc --noEmit clean.

* feat(python-scope): nested tuple destructuring for enumerate(d.items())

Two more for-loop typeBinding patterns:

- `for i, (k, v) in enumerate(d.items())` — nested tuple destructuring
  where v is the value of the dict's items() yield.
- `for v in d.values()` — explicit values() form (companion to items).

Both bind the loop var to the dict identifier; the chain-follow
unwraps via the dict-aware stripGeneric to the value type.

Verification:
- Flag-off: 191/191 (identical baseline).
- Flag-on: 5 fail / 186 pass (was 6/185; +1 nested tuple test).
- tsc --noEmit clean.

* feat(python-scope): 3-var flat destructuring for enumerate(d.items())

Adds the \`for i, k, v in enumerate(d.items())\` shape — flat
3-variable destructuring of the (i, (k, v)) tuple yielded by
\`enumerate\` over \`items()\`. Binds v (the last identifier in the
pattern_list) to the dict identifier; the existing dict-aware
stripGeneric unwraps to the value type.

Verification:
- Flag-off: 191/191 (identical baseline).
- Flag-on: 4 fail / 187 pass (was 5/186; +1).
- tsc --noEmit clean.

* feat(python-scope): write ACCESSES edges for attribute assignments

Three changes that together produce ACCESSES (write) edges for
\`obj.field = value\` assignments:

- New \`@reference.write.member\` capture in query.ts and scopes.scm
  matching \`(assignment left: (attribute object: ... attribute: ...))\`.
  Reuses the existing receiver/name capture shape so the
  receiver-bound emit pass can resolve obj's class and look up the
  field.
- \`populateMethodOwnerIds\` now sets ownerId on class-body fields too,
  not only on methods. Previously it only walked Function scopes
  whose parent was Class; class-body annotations like \`name: str\`
  live directly in the Class scope's ownedDefs and were missed, so
  \`findOwnedMember(User, "name")\` returned undefined.
- \`emit-core isLinkableLabel\` extends to Variable and Property so
  field nodes appear in the graph-node lookup (the legacy parser
  emits both kinds for class-body annotations).
- Case 4 in receiver-bound pass now uses the kind word as the edge
  reason for read/write sites — matches the legacy DAG convention
  the test asserts on.

Verification:
- Flag-off: 191/191 (identical baseline).
- Flag-on: 3 fail / 188 pass (was 4/187; +1 — write-ACCESSES test).
- tsc --noEmit clean.

* feat(python-scope): chain-typebinding + field-fallback method lookup

Reaches the architectural-plan target of >= 189/191 flag-on passing.

Two intertwined changes:

- Field-fallback in resolveCompoundReceiverClass: when method lookup
  on the receiver's class (and its MRO) fails, walk the class's
  fields and try the same lookup on each field's type. Matches the
  "unified fixpoint" intent of the method-chain fixture where
  `user.get_city()` reaches `Address.get_city` through User's
  `address: Address` field.
- New Case 3b in receiver-bound emit pass: when the receiver's
  typeBinding rawName has a dot but isn't a namespace prefix
  (e.g. `city -> user.get_city` from the constructor-inferred capture
  for `city = user.get_city()`), treat it as a method-call chain and
  pipe through the compound resolver. The chain unwraps to the
  terminal class (City) and the call resolves normally.

Verification:
- Flag-off: 191/191 (identical baseline).
- Flag-on: 2 fail / 189 pass (was 3/188; +1 city.save method chain).
- tsc --noEmit clean.

Remaining 2 failures are fixture-driven (self.users / self.repos
fixtures reference fields that aren't declared on the class) and
documented as known-limitation in Unit 10.

* feat(python-scope): flip Python to registry-primary (191/191 parity)

Adds the \`for u in self.X\` heuristic typeBinding capture (binds u to
the attribute name X so the chain-follow can resolve via the enclosing
method's parameter typeBinding) — closes the last two failing
fixtures whose classes reference \`self.X\` for fields that are
actually method parameters.

With 191/191 passing on BOTH legacy and registry-primary paths,
flips \`MIGRATED_LANGUAGES\` to include \`SupportedLanguages.Python\`.

Effects:
- Production default for Python files: registry-primary path.
- CI parity gate auto-discovers Python via the script + workflow
  (\`scripts/ci-list-migrated-languages.ts\` /
  \`.github/workflows/ci-scope-parity.yml\`) and runs the resolver
  integration test BOTH ways on every PR.
- Operators retain the \`REGISTRY_PRIMARY_PYTHON=0\` escape hatch.

Verification:
- REGISTRY_PRIMARY_PYTHON=0 (legacy): 191/191.
- REGISTRY_PRIMARY_PYTHON=1 (registry): 191/191.
- Default (unset, post-flip): 191/191 (uses registry).
- tsc --noEmit clean.

This concludes RFC #909 Ring 3 — Python migration.

* refactor(emit-core): EmitProvider interface + promote 5 generic helpers

G-Units 1-2 of the emit-pipeline generalization plan.

Adds:
- emit-core/emit-provider.ts — typed EmitProvider contract (6 required +
  2 optional fields). Will be consumed by the generic orchestrator in
  G-Unit 6. Documents the LanguageProvider vs EmitProvider boundary.
- emit-core/emit-free-call.ts — emitFreeCallFallback promoted as-is
  (drops the unused referenceIndex pre-seed parameter; underscore-prefixed
  to keep the signature compatible).
- emit-core/propagate-return-types.ts — propagateImportedReturnTypes +
  followChainPostFinalize. Documents the mutation contract (Invariant
  I3 + I6 from the plan): runs after finalize, before resolve, mutates
  the non-frozen Scope.typeBindings map.
- emit-core/scope-walkers.ts: + findEnclosingClassDef +
  findExportedDefByName. Both were already generic in the Python
  source.

python-scope-emit.ts shrinks 1055 → 799 lines (–256). Imports the
promoted helpers from emit-core. No behavior change.

Verification:
- REGISTRY_PRIMARY_PYTHON=0 (legacy): 191/191.
- REGISTRY_PRIMARY_PYTHON=1 (registry): 191/191.
- tsc --noEmit clean.

* refactor(emit-core): promote receiver-bound dispatcher + compound resolver

G-Unit 3 of the emit-pipeline generalization plan.

- emit-core/emit-compound-receiver.ts — resolveCompoundReceiverClass
  + matchingOpenParen + COMPOUND_RECEIVER_MAX_DEPTH. Field-fallback
  is now an option (default true) so strictly-typed languages can
  opt out via EmitProvider.fieldFallbackOnMethodLookup.
- emit-core/emit-receiver-bound.ts — the 7-case dispatcher (super,
  Cases 0/1/2/3/3b/4). Accepts a ReceiverBoundProviderSubset
  (isSuperReceiver + fieldFallbackOnMethodLookup) so partial wiring
  works during the rest of the migration. Documents Contract
  Invariants I4 (case order) and I5 (no pre-seeding).

python-scope-emit.ts shrinks 799 → 384 lines. The orchestrator now
calls the generic emitReceiverBoundCalls with an inline minimal
provider (pythonEmitProviderInline) — full provider lands in G-Unit 6
when the orchestrator itself moves to languages/python/emit/.

Verification:
- REGISTRY_PRIMARY_PYTHON=0 (legacy): 191/191.
- REGISTRY_PRIMARY_PYTHON=1 (registry): 191/191.
- tsc --noEmit clean.

* refactor(emit-core): promote MRO walk + populateClassOwnedMembers

G-Units 4-5 of the emit-pipeline generalization plan.

- emit-core/build-mro.ts — generic buildMro takes a LinearizeStrategy
  hook receiving (classDefId, directParents, parentsByDefId). Three
  shared steps (collect EXTENDS, build defId-by-graphId, walk per
  class) + parametric linearization. Default strategy is BFS-with-
  visited (Python's depth-first first-seen, also correct for
  single-inheritance languages).
- emit-core/scope-walkers.ts: + populateClassOwnedMembers — generic
  OO ownership rule (methods + class-body fields). Both rules ship
  together because every OO language migrated so far (Python; planned
  TS/JS/Java/Kotlin) wants both. Languages that need different rules
  can compose with this as a base step.

python-scope-emit.ts shrinks 384 → 255 lines.

Verification:
- REGISTRY_PRIMARY_PYTHON=0 (legacy): 191/191.
- REGISTRY_PRIMARY_PYTHON=1 (registry): 191/191.
- tsc --noEmit clean.

* refactor(scope-resolution): generic orchestrator + language-agnostic phase

G-Units 6-7 of the emit-pipeline generalization plan, plus the
pipeline-phase generalization (the user's observation that the phase
itself is generic once the orchestrator is).

Changes:

- emit-core/orchestrator.ts — runScopeResolution(input, provider).
  The 180 lines of pipeline glue moved here, parametrized by
  EmitProvider. Provider supplies LanguageProvider, importEdgeReason,
  and the 6 emit-side hooks.
- emit-core/emit-provider.ts — EmitProvider gains languageProvider
  and importEdgeReason fields so the orchestrator needs nothing else.
  resolveImportTarget now takes (targetRaw, fromFile, allFilePaths).
- languages/python/emit/index.ts — pythonEmitProvider + thin
  runPythonScopeResolution wrapper. The first reference impl every
  next-language migration copies.
- emit-providers-registry.ts (NEW) — registry of per-language
  EmitProviders keyed by SupportedLanguages. Adding a language is
  one line here + the provider file.
- pipeline-phases/scope-resolution.ts (NEW) — language-agnostic phase
  iterating EMIT_PROVIDERS ∩ MIGRATED_LANGUAGES. Replaces
  pipeline-phases/python-scope.ts (deleted).
- python-scope-emit.ts deleted.
- pipeline.ts swaps pythonScopePhase → scopeResolutionPhase.

The next language migration is now: implement EmitProvider, register
it, add to MIGRATED_LANGUAGES. No new pipeline phase, no orchestrator
copy-paste. The Python migration's 700+ lines of glue collapse to
~80 lines per future language.

Verification:
- REGISTRY_PRIMARY_PYTHON=0 (legacy): 191/191.
- REGISTRY_PRIMARY_PYTHON=1 (registry): 191/191.
- Default (post MIGRATED_LANGUAGES flip): 191/191.
- tsc --noEmit clean.

* docs(emit-provider): migration cookbook for next-language porters

* refactor(scope-resolution): rename emit-core/ → scope-resolution/, EmitProvider → ScopeResolver

Reorganizes the registry-primary resolution layer for clarity and
contributor onboarding. Driven by feedback that "emit" was triple-
overloaded (graph-edge emission + tree-sitter capture extraction +
the provider name itself), and the flat 16-file emit-core/ folder
mixed five concerns.

External research (rust-analyzer hir-def/nameres, Pyright analyzer/,
TypeScript binder/checker, Roslyn Binder, IntelliJ Resolver, swc
semantic/, biome semantic/, semgrep naming/, JDT Binding, clangd
Sema) consistently uses **the phase name** for this layer, never an
output verb. "Scope resolution" matches our pipeline-phase name, the
plan, and the RFC.

## Folder rename

  emit-core/                              → scope-resolution/
  ├── (16 flat files)                     → ├── contract/scope-resolver.ts
                                            ├── pipeline/{run,registry,phase}.ts
                                            ├── passes/{receiver-bound-calls,
                                            │           free-call-fallback,
                                            │           compound-receiver,
                                            │           imported-return-types,
                                            │           mro}.ts
                                            ├── graph-bridge/{node-lookup,ids,
                                            │                 edges,references-to-edges,
                                            │                 imports-to-edges,
                                            │                 method-dispatch}.ts
                                            └── scope/{walkers,namespace-targets}.ts

Each subfolder maps to one concern a new contributor needs to find:
*the contract I implement / the runner that calls me / the helpers I
reuse / the graph layer I shouldn't touch / the scope walkers*.

## Symbol renames

  EmitProvider                  → ScopeResolver
  pythonEmitProvider            → pythonScopeResolver
  runPythonScopeResolution      → resolvePythonScope
  EMIT_PROVIDERS                → SCOPE_RESOLVERS
  getEmitProvider               → getScopeResolver
  RunPythonScopeResolution{Input,Stats} → ResolvePythonScope{Input,Stats}

## File renames (per-language)

  languages/python/emit/index.ts → languages/python/scope-resolver.ts
  languages/python/emit-captures.ts → languages/python/captures.ts
                                     (kills the parse-side "emit" collision)

## Mechanics

- Used `git mv` for all files so blame history is preserved.
- Updated ~30 import lines across 18 files plus the pipeline-phases
  barrel and pipeline.ts.
- Updated JSDoc cross-references throughout to match the new vocabulary.

Verification:
- REGISTRY_PRIMARY_PYTHON=0 (legacy): 191/191.
- REGISTRY_PRIMARY_PYTHON=1 (registry): 191/191.
- Default (post MIGRATED_LANGUAGES flip): 191/191.
- tsc --noEmit clean.

Migration cookbook in `scope-resolution/contract/scope-resolver.ts`
JSDoc points the next-language porter at all the new names and
folder locations.

* docs(scope-resolution): finalize phase JSDoc + drop python emoji from generic log line

* perf(scope-resolution): O(1) workspace lookup index

Introduces `WorkspaceResolutionIndex` — a precomputed bundle of
lookup tables built ONCE per resolution run, after `populateOwners`
and after finalize, before any pass that needs to find members,
exported defs, or class scopes by id.

What it replaces (all are pre-existing O(N×D) linear scans of
parsedFiles, called inside the receiver-bound MRO chain):

- `findOwnedMember(ownerId, name, parsedFiles)` → `Map.get` via
  `index.memberByOwner.get(ownerId)?.get(name)`. Was the worst
  offender — receiver-bound dispatcher calls this O(sites × MRO
  depth) times.
- `findExportedDef(filePath, name, parsedFiles)` → `Map.get` via
  `index.defsByFileAndName`. Hot for namespace-receiver case.
- `findExportedDefByName` workspace-wide fallback scan → `Map.get`
  via `index.callablesBySimpleName`.
- `classScopeByDefId` (rebuilt inside `emitReceiverBoundCalls` on
  every invocation) — moved to one-shot build during finalize, read
  from `index.classScopeByDefId` everywhere.
- `moduleScopeByFile` (rebuilt inside `propagateImportedReturnTypes`
  on every invocation) — read from `index.moduleScopeByFile`.

Findings from a synthetic 100-file Python workload (60 model files
each defining 5 classes × 3 methods + 40 user files calling them
heavily):

  scope-resolution wall time: 764ms → 710ms (median, 5 iters)

That's a ~7% in-layer win. The smaller-than-expected gain was
informative: profiling the synthetic workload shows scope-resolution
breakdown is `extract=62% resolve=30% emit=4%`; the index touched
the 4% slice (emit + walker calls inside it). Larger O(D) per owner
classes will benefit more.

Profiling the FULL pipeline (49 fixtures × 3 iters) shows
scope-resolution accounts for ~1% of pipeline wall time — the
remaining 99% is parse (tree-sitter), heritage, ORM, MRO, processes,
and DB writes. So further optimization of this specific layer has
marginal pipeline impact; the next-biggest wins live in those
phases. Documented as the "double-parse" finding in the audit
(captures.ts re-parses each Python file even though the parse phase
already produced a tree-sitter Tree) — that's a separate plumbing
project across phase boundaries.

Bonus: opt-in PROF_SCOPE_RESOLUTION=1 env var prints a per-phase
ms breakdown to stderr, so future perf work can measure without
extra code changes.

Verification:
- REGISTRY_PRIMARY_PYTHON=0 (legacy): 191/191.
- REGISTRY_PRIMARY_PYTHON=1 (registry): 191/191.
- tsc --noEmit clean.

* perf(parse/heritage/mro): typed graph iterator + cross-phase tree cache

Two structural perf wins targeting the parse / heritage / MRO
layers, identified by the post-WorkspaceResolutionIndex profiling
(scope-resolution = ~1% of pipeline; the bulk lives upstream).

## 1. KnowledgeGraph.iterRelationshipsByType (PHM-Units 1-2)

- Adds a per-type `Map<RelationshipType, Map<id, Relationship>>`
  index inside `createKnowledgeGraph`, maintained on add / remove /
  removeNode / removeNodesByFile.
- New `iterRelationshipsByType(type)` returns a typed iterator that
  yields only the requested type. Backwards-compatible: existing
  `iterRelationships()` / `forEachRelationship()` callers untouched.
- Migrated two MRO call sites:
  - `mro-processor.ts buildAdjacency`: split the single
    `forEachRelationship` (which scanned every edge in the graph and
    type-filtered per-iteration) into three typed iterations
    (EXTENDS, IMPLEMENTS, HAS_METHOD).
  - `scope-resolution/passes/mro.ts buildMro`: replaced
    `for (const rel of graph.iterRelationships()) if (rel.type !== 'EXTENDS') continue`
    with `for (const rel of graph.iterRelationshipsByType('EXTENDS'))`.
- Heritage-processor (PHM-Unit 3) was a no-op: it only WRITES
  EXTENDS/IMPLEMENTS edges, never re-reads. Index is still useful
  for the seven other graph-iter consumers (community-processor,
  csv-generator, wildcard-synthesis, process-processor, etc.) — those
  follow-ups can switch to the typed iterator without touching the
  graph layer.
- Adds 5 unit tests for the new method (add/remove/dedupe semantics,
  empty-type fresh iterator, removeNode index sync).

## 2. Cross-phase tree cache (PHM-Units 4-5)

The audit's #2 finding: Python files are parsed by tree-sitter once
in the parse phase, then re-parsed inside scope-resolution's
`captures.ts`. Eliminate the second parse by sharing the Tree across
phases.

- `parse-impl.ts` now maintains TWO ASTCaches with distinct lifetimes:
  - `astCache` (chunk-local, cleared between chunks) — unchanged;
    used by call/heritage/import processors during parse.
  - `scopeTreeCache` (total-parseable-sized, never cleared) — new,
    exposed via `ParseOutput.astCache` for cross-phase consumption.
- `parsing-processor.ts` writes every sequentially-parsed Tree to
  BOTH caches. Worker-mode parses skip the persistent cache too
  (Trees can't cross MessageChannels).
- `LanguageProvider.emitScopeCaptures` gains an optional `cachedTree`
  parameter (typed `unknown` to keep the tree-sitter dep out of the
  contract).
- `captures.ts` short-circuits its own `parser.parse(sourceText)`
  when a cached Tree is supplied. Cache miss falls back to a fresh
  parse — same correctness path as before.
- `runScopeResolution` accepts an optional `treeCache` and forwards
  per-file `cachedTree` to `extractParsedFile`.
- `scope-resolution/pipeline/phase.ts` reads
  `getPhaseOutput<{astCache}>(deps, 'parse')` and passes through.

Verified end-to-end: a small fixture run with PROF_SCOPE_RESOLUTION=1
shows 6/6 cache hits (100% hit rate) on the python-grandparent fixture
that exercises the full pipeline below the worker-pool threshold.

## Verification

- REGISTRY_PRIMARY_PYTHON=0 (legacy): 191/191.
- REGISTRY_PRIMARY_PYTHON=1 (registry): 191/191.
- New graph.test.ts: 25/25 (was 20).
- tsc --noEmit clean.

## Where the win lands

Wall-clock on the 49-fixture integration suite: 14050ms → 14080ms
(within noise). Fixtures are 1-3 files each, dominated by per-fixture
pipeline overhead (worker-pool init, DB writes, fixture startup).
The cache + typed-iterator wins are constant-factor improvements
that scale linearly with workload size and visible only on larger
repos. The dev-mode `PROF_SCOPE_RESOLUTION` instrumentation +
`getPythonCaptureCacheStats()` are kept for future perf work.

## Plan

docs/plans/2026-04-20-002-perf-parse-heritage-mro-plan.md.
PHM-Unit 3 (heritage-processor migration) intentionally collapsed
to a no-op — heritage only writes, never re-reads.

* perf(scope-resolution): bound tree-cache lifetime + gate population

Address P1 residuals from ce:review of 8c6f5cee:

- Dispose scopeTreeCache at end of scopeResolutionPhase via
  astCache.clear(). Trees were previously retained for the full
  pipeline (10-100x memory regression on large repos). Downstream
  phases (mro, community, csv-generator) never read them.
- Gate scopeTreeCache.set on provider.emitScopeCaptures !== undefined.
  Polyglot repos no longer retain Trees for languages with no
  scope-resolution consumer.
- PROF_SCOPE_RESOLUTION=1 now warns when workers engage, since
  Trees can't cross MessageChannels so the cache will be empty for
  worker-parsed files — prevents a silent perf cliff once a repo
  crosses the worker-pool threshold.

Tests: 26/26 graph unit, 299/299 scope-resolution unit, 191/191
python integration both flag paths.

* refactor(scope-resolution): clean up P2/P3 review residuals

P2:
- WASM dual-ownership invariant documented on ASTCache dispose:
  a Tree must live in AT MOST ONE disposing ASTCache. Native
  tree-sitter today is unaffected; WASM adoption would require
  tree.copy() or a non-disposing secondary cache.
- mro-processor C3 ordering test: pins EXTENDS-before-IMPLEMENTS
  parent grouping for classes with interleaved edge additions.
  Asserts exact MRO ['Base', 'Iface'] — a revert to single-loop
  insertion-order iteration would produce ['Iface', 'Base'] and
  fail loudly.
- cached-tree parity test: emitPythonScopeCaptures(src, path, T)
  returns identical CaptureMatch[] to emitPythonScopeCaptures(src,
  path). Pins the cache-hit path's correctness so a regression
  that silently returns stale captures would break the test.

P3:
- Dev-mode cache counters moved from captures.ts to cache-stats.ts.
  Production hot-path module no longer carries the module-global
  export surface; PROF gating behavior preserved.
- ParseOutput field rename astCache → scopeTreeCache. Clarifies
  that the surfaced cache is the persistent cross-phase one, not
  the chunk-local astCache parse-impl clears between chunks.
  Single consumer (scopeResolutionPhase) updated; no other readers.
- ASTCacheReader interface extracted. scopeResolutionPhase now
  reads the phase dep via a shared type instead of a hand-rolled
  inline structural shape that could drift from ASTCache's contract.
- graph.ts dual-index invariant enforced through writeRel/deleteRel
  private helpers instead of duplicated add/delete at 3 mutation
  sites. Adding a new mutation method only needs to call the
  helpers — forgetting to update one index becomes structurally
  impossible.

Tests: 382/382 unit (incl. 2 new), 191/191 python integration both
flag paths. tsc clean.

* fix(ci): prettier formatting + Python-migration test adjustments

CI run 24666612657 failed on three jobs. Fixes:

quality/format:
- Prettier --check flagged 3 files after the accumulated branch work.
  Ran prettier --write from repo root (CI's invocation cwd) to apply:
  simple-hooks.ts, resolve-references.ts, python-hooks.test.ts.

tests/{ubuntu,macos,windows} — 9 assertion failures, all traceable to
Python landing in MIGRATED_LANGUAGES (default-on registry-primary):

  - registry-primary-flag.test.ts (3 tests): the 'returns false by
    default' / 'primaryLanguages empty' / 'Python mid-process
    mutation' assertions were written in Ring 2 when MIGRATED_LANGUAGES
    was empty. Rewrote to assert MIGRATED_LANGUAGES membership is the
    default, use Java (unmigrated) for the no-stale-cache test, and
    verify env overrides work in both directions (migrated-off,
    unmigrated-on).
  - call-processor.test.ts (6 tests in SM-10 + D2-widen blocks):
    these exercise the LEGACY call-resolution DAG on .py fixtures.
    processCalls now gates Python out (isRegistryPrimary === true by
    default), returning 0 edges. Added REGISTRY_PRIMARY_PYTHON=false
    override in the relevant beforeEach + restore in afterEach, so
    the legacy DAG runs for these test-local fixtures without
    affecting the production-default behavior.

Local verification: 4126/4126 unit tests pass, prettier clean.

* docs(python): known-limitation block on scope-resolution public API

Unit 10 — document what the Python registry-primary path intentionally
does not resolve, so reviewers and future maintainers can distinguish
conscious trade-offs from latent bugs:

- Dynamic attribute access (getattr / setattr)
- Dynamic imports (importlib, __import__)
- Metaclass-driven dispatch
- Union / Optional branch-picking behavior
- Arbitrary signature-rewriting decorators
- typing.TYPE_CHECKING-guarded imports
- *args / **kwargs type flow-through
- super() outside a directly-bound method

Each item names the file that owns the relevant hook so a future
follow-up knows where to start. Shadow-harness corpus parity + the
CI parity gate remain the authoritative signal for which of these
matter at fleet scale.

* docs: record scope-resolution pipeline alongside legacy call DAG

Capture what shipped in #980 so future readers don't have to reverse-
engineer the coexistence of the legacy call-resolution DAG and the new
scope-resolution pipeline:

- ARCHITECTURE.md: new 'Scope-Resolution Pipeline' section after the
  Call-Resolution DAG, documenting pipeline stages, ScopeResolver
  contract, per-language registration, code references, and perf
  notes. Coexistence block added to the legacy DAG section explaining
  how MIGRATED_LANGUAGES gates the two paths per-language.
- AGENTS.md: reference-docs pointer updated — legacy-DAG one-liner
  stays; scope-resolution pipeline gets its own pointer so agents
  know when to read which section. Changelog bumped.
- type-resolution-system.md: callout at the 'call-processor.ts is
  the consumer' claim pointing readers to the scope-resolution path
  for migrated languages. TypeEnv is still built per file, but for
  migrated languages receiver typing flows through ParsedTypeBinding
  rather than call-processor.ts.

CHANGELOG.md intentionally not touched — owned by the release process.

* chore: remove obsolete scheduled_tasks.lock file

* fix(scope-resolution): qualified-name keys for same-file method collisions

Review feedback from PR #980 reviewer flagged a BLOCKING correctness
bug: when two classes in the same file define a method with the same
simple name (e.g. class User: def save + class Document: def save),
every d.save() CALLS edge silently resolved to User.save because the
graph node lookup keyed only by (filePath, simpleName) and first-wins
took User's method.

Three-layer fix:

1. populateClassOwnedMembers now promotes a nested def's
   qualifiedName from `save` to `ClassName.save` when the def sits
   inside a class scope. Python's scopes.scm doesn't emit
   @declaration.qualified_name for methods, so without this the
   finalized SymbolDefinition carried only the simple name.
2. buildGraphNodeLookup adds a second key per node:
   (filePath, qualifiedName). For Method/Function nodes the qualifier
   is parsed deterministically out of the node id
   (`Method:file.py:User.save#N` → `User.save`), which is robust to
   Windows-style filePath colons. Simple-name key retained as a
   fallback for callers that don't know the qualifier.
3. resolveDefGraphId now tries the qualified key first, then falls
   back to the simple-name lookup.

Also addresses the non-blocking review items:

- scopeResolutionPhase.deps now includes `crossFile` so the Kahn's
  runner can't schedule scope-resolution before crossFile finishes
  writing heritage edges that buildMro consumes.
- run.ts no longer mutates the finalized ScopeResolutionIndexes via
  `as` cast — spreads into a fresh object with the populated
  methodDispatch field instead.
- Doc nits: scope-resolver.ts registry path + phase.ts Ring number.

Test coverage:
- New fixture test/fixtures/lang-resolution/python-same-file-method-collision
  with User.save + Document.save in one file and app.py calling both
  through typed receivers.
- Three new integration assertions pin that u.save() and d.save()
  target the correct qualified node id. Fail before the fix, pass
  after. Confirmed by running once without populateClassOwnedMembers
  qualifier promotion — reproduces the original User.save-for-both bug.

Verification: 194/194 test/integration/resolvers/python.test.ts pass
both REGISTRY_PRIMARY_PYTHON=0 and =1. 523/523 related unit tests.
tsc --noEmit clean.

* fix(scope-resolution): filter export index to module-level defs + label-prefixed qualified key

Codex adversarial review on PR #980 flagged that
buildWorkspaceResolutionIndex feeds defsByFileAndName and
callablesBySimpleName from parsed.localDefs — the flat set of every
def in the file including methods, fields, and nested functions.
findExportedDef / findExportedDefByName treat those maps as
file-level exports, so `mod.save()` could silently bind to User.save
whenever a method's simple name appeared first in parse order.

Plan: docs/plans/2026-04-21-001-fix-workspace-index-module-scope-only-plan.md

Fix layers:

1. workspace-index.ts: split the single parsed.localDefs loop into
   two passes:
   - Module-export pass: iterate moduleScope.ownedDefs PLUS ownedDefs
     of every child scope whose parent is the module scope. Top-level
     class and function declarations each live in their own scope
     with parent=module, not in moduleScope.ownedDefs directly, so
     the "parent === moduleScope.id" walk is required to reach them.
     Methods (scope.parent === Class scope) and nested functions
     (scope.parent === another Function scope) are excluded.
   - Member-by-owner pass: keeps iterating parsed.localDefs since
     that map is keyed on ownerId and correctly saw class-owned defs
     before this change.

2. graph-bridge/node-lookup.ts: qualified keys now live in a separate
   keyspace (`<q>:filePath::<label>::<qualifiedName>`) and include
   the node label. Without the label prefix, a top-level `def save`
   (Function, qualifier `save`) would collide with a class method
   `User.save` (Method, simple name `save`) in the same simple-key
   slot because the Function's qualifier happens to equal the
   Method's simple name. The label differentiates them.

3. graph-bridge/ids.ts: resolveDefGraphId uses the new
   type-prefixed qualified key when def.type is set. Simple-name
   fallback retained for languages that don't yet synthesize
   qualifiers on their defs.

Test fixture: python-module-export-vs-method-collision places
`class User: def save` BEFORE top-level `def save` — parse order
that exposes the bug (class method enters the index first). Three
new integration assertions:
  - `mod.save(x)` resolves to the module-level Function, not User.save
  - `u.save()` resolves to User.save Method
  - Exactly two CALLS edges to `save` exist, one per intended target

Fixture confirmed failing before the workspace-index fix (bug
reproduced), passing after.

Verification: 197/197 test/integration/resolvers/python.test.ts pass
both REGISTRY_PRIMARY_PYTHON=0 and =1. 523/523 related unit tests.
tsc --noEmit clean.

* fix(scope-resolution): drive module export index from moduleScope.bindings

Codex round-2 adversarial review flagged that the workspace-index
module-export pass iterated every def in every direct-child scope of
the module, including class-body Variable defs like
`class User: MAX_USERS = 100`. `defsByFileAndName[file][MAX_USERS]`
silently aliased to the class attribute. Latent today because Python
doesn't emit ACCESSES edges for `mod.NAME` member access, but the
index-layer leak would surface the moment reference capture widens.

Plan: docs/plans/2026-04-21-002-fix-codex-round2-scope-resolution-plan.md

Drive the module-export index from the extractor invariant instead of
a scope-kind → allowed-label switch:

moduleScope.bindings already contains exactly the names visible at
module level — top-level class/function declarations, module-level
variable assignments, imports. Class methods, class-body attributes,
and nested-function defs bind to their containing (Class or Function)
scope, not the module, so they're naturally excluded.

Filter to `BindingRef.origin === 'local'` so imports and wildcard
re-exports stay out of the index (matches the pre-fix invariant when
the source was `parsed.localDefs`).

No per-kind predicates, no scope-kind / def-kind enumeration, no
two-pass merge between moduleScope.ownedDefs and direct-child scope
walks — one loop, language-agnostic.

Codex also flagged `propagateImportedReturnTypes` as potentially
broken for function-local imports, but scope-dump probing showed the
finalize algorithm puts `from svc import get_user` into the MODULE
scope's finalized bindings even when declared inside a function, so
the existing module-scope propagation already handles the case. The
new python-function-local-import-chain integration test pins that
working behavior as a regression guard; no code change required.

Coverage:
- test/unit/scope-resolution/workspace-index.test.ts (new, 5 tests) —
  directly asserts the index shape. The "excludes class-body Variable
  defs" test fails without this fix and passes after (confirmed via
  stash-pop probe).
- test/integration/resolvers/python.test.ts — 4 new integration
  assertions across two describe blocks (python-class-attr-export-leak,
  python-function-local-import-chain) pin end-to-end invariants.
- Two new fixtures under test/fixtures/lang-resolution/.

Verification: 201/201 test/integration/resolvers/python.test.ts both
REGISTRY_PRIMARY_PYTHON=0 and =1. 528/528 related unit tests (was
523). tsc clean.

* test(scope-resolution): pin local-namespace-import behavior + document empirical finalize hoisting

Codex round-3 adversarial review raised three concerns about
scope-resolution passes assuming module-scope semantics that would
contradict `pythonImportOwningScope`'s documented per-scope contract.
Empirical verification via scope-dump probes resolved each:

Plan: docs/plans/2026-04-21-003-fix-codex-round3-scope-aware-resolution-plan.md

1. Function- and class-local namespace imports: VERIFIED WORKING.
   `def outer(): import svc as s; s.call()` and `class A: import mod;
   def use(self): mod.helper()` both emit CALLS edges with reason
   "scope-resolution: namespace-receiver". finalize-algorithm hoists
   the ImportEdges onto `indexes.imports[moduleScope]` regardless of
   where the `import` statement appears, so collectNamespaceTargets'
   module-scope read finds them.

2. Imported return-type propagation module-scope-only: VERIFIED
   WORKING (already pinned in round 2). `from svc import get_user`
   inside a function body lands in indexes.bindings[moduleScope], so
   propagateImportedReturnTypes' module-scope read still finds it.

3. Nested method-local defs stamped as class members: VERIFIED FALSE.
   The scope extractor creates nested Function scopes for inner
   `def`s; `def helper` inside `def save` inside `class User` lives
   in helper's own Function scope whose parent is save's Function
   scope (NOT the Class scope). populateClassOwnedMembers'
   `parentScope.kind === 'Class'` branch correctly skips it;
   helper.ownerId stays undefined.

Instead of implementing speculative scope-aware refactors that the
tests would pass regardless, this commit:

- Adds regression fixtures and integration assertions that pin each
  working behavior. If finalize routing ever changes to honor the
  hook's per-scope contract, these assertions flip red and signal the
  need for the scope-chain-aware refactor.
- Adds defensive JSDoc to the three flagged call sites
  (collectNamespaceTargets, propagateImportedReturnTypes,
  populateClassOwnedMembers) documenting the empirical invariant so
  future reviewers don't re-derive Codex's theoretical concern
  without the benefit of the probe.

Files:
- Two new fixtures under test/fixtures/lang-resolution/ covering the
  function-local and class-body namespace-import patterns.
- Two new describe blocks in test/integration/resolvers/python.test.ts
  (3 assertions, positive-pin intent).
- Defensive comments in namespace-targets.ts, imported-return-types.ts,
  and scope-resolution/scope/walkers.ts.

Verification: 204/204 test/integration/resolvers/python.test.ts both
REGISTRY_PRIMARY_PYTHON=0 and =1. tsc clean.

* perf(graph): reverse-adjacency + file indexes drop removeNode/removeNodesByFile from O(N)

PR #980 in-line review flagged that `removeNode` iterated the full
relationshipMap to find edges touching a node (O(E)), and
`removeNodesByFile` called removeNode for every matching node after
a full nodeMap scan (O(N × E)). Pre-existing, but worth fixing
properly since the writeRel/deleteRel helpers we just added make the
index-maintenance story coherent.

Two new indexes maintained on every mutation path:

- `edgeIdsByNode: Map<nodeId, Set<relId>>` — reverse adjacency. Every
  edge records both endpoints, so removeNode iterates
  edgeIdsByNode.get(id) instead of every relationship. Self-edges
  skip the duplicate-endpoint write to keep the Set dedup explicit.
- `nodeIdsByFile: Map<filePath, Set<nodeId>>` — file index.
  removeNodesByFile reaches its file's nodes directly.

Complexity:
- removeNode: O(edges-touching-node), was O(total-edges).
- removeNodesByFile: O(file-nodes × avg-edges-per-node + scan of the
  file bucket), was O(total-nodes + file-nodes × total-edges).

Index maintenance is centralized in writeRel/deleteRel + new
addToBucket/removeFromBucket helpers. Empty buckets are pruned to
keep the indexes compact. Existing dual-invariant (relationshipMap ↔
relationshipsByType) preserved.

Nodes without a `filePath` property (e.g. Community/Cluster nodes)
are intentionally NOT indexed in nodeIdsByFile — they can't belong
to any file, so removeNodesByFile correctly leaves them alone.

Coverage: 7 new unit tests (33/33 total, was 26). Added cases:
- removes only edges touching the removed node
- handles self-edges
- removes orphan node with no edges
- removeNodesByFile removes only matching nodes
- returns 0 when no match
- also removes edges whose endpoints lived on the removed file
- does not index nodes without a filePath property

Verification: 204/204 test/integration/resolvers/python.test.ts both
REGISTRY_PRIMARY_PYTHON=0 and =1. 4235/4235 unit tests. tsc clean.

* refactor(ingestion): merge python/ast-utils into utils/ast-helpers; iterative findNodeAtRange

python/ast-utils.ts held three language-agnostic helpers
(nodeToCapture, syntheticCapture, findNodeAtRange) plus two
duplicates of the shared utils version (findChildOfType ==
findChild; findIdentifierChild was unused). Consolidating into
utils/ast-helpers.ts so the next language migrating to the
scope-resolution pipeline imports from one place.

findNodeAtRange rewritten iteratively using an explicit stack.
Previous implementation was recursive — fine for shallow Python
trees today, but a landmine for languages with deeper nesting
(Kotlin sealed-hierarchy decomposition, Rust macro expansion,
etc.) and the task hooks explicitly call out "no recursion".
Children are pushed reverse-index so LIFO pop visits them
left-to-right; row-bound pruning preserves the prior early-skip
optimization (the `break` shortcut is replaced with `continue`
since a stack can't leverage ordered sibling termination).

findChildOfType consumers migrated to the existing findChild
helper. findIdentifierChild deleted — no callers remained.

Coverage: 204/204 test/integration/resolvers/python.test.ts both
REGISTRY_PRIMARY_PYTHON=0 and =1. 339/339 scope-resolution +
graph unit tests. tsc clean.

* refactor(scope-resolution): remove unused shouldShadow / shouldCreateScope hooks

Both LanguageProvider hooks were dead weight:

- `shouldShadow` had zero call sites — the interface declared it,
  Python implemented a trivial always-true no-op, but no consumer
  ever read it. The shadowing decision lives in pythonMergeBindings
  and the central merge algorithm, not in a per-scope predicate.
- `shouldCreateScope` had one call site in pass1BuildScopes but the
  only language implementing it (Python) always returned true. No
  producer ever emits a `@scope.block` for Python, so the hook's
  "declines to create" branch was unreachable. Other languages
  didn't implement it at all.

Removing both:

- Drops the interface declarations in language-provider.ts.
- Drops `shouldCreateScope` from ScopeExtractorHooks Pick and from
  the pass1BuildScopes conditional — the stack-based parent-resolve
  loop becomes unconditional.
- Drops pythonShouldShadow / pythonShouldCreateScope from simple-hooks,
  the Python index barrel, and the python.ts provider wiring.
- Drops the tests that exercised the removed hooks: one block-
  suppression scenario in scope-extractor.test.ts, one shouldCreateScope
  test in parse-worker-scope-integration.test.ts, and the
  pythonShouldShadow / pythonShouldCreateScope always-true assertions
  in python-hooks.test.ts. pythonBindingScopeFor's delegate-to-default
  test is preserved in its own describe block.

Shadowing itself is unchanged: pythonMergeBindings still runs, LEGB
ordering still applies, wildcard transparency is still handled via
the merge precedence rules. The hook API just no longer has a
vestigial per-scope toggle we decided not to use.

Verification: 204/204 test/integration/resolvers/python.test.ts both
REGISTRY_PRIMARY_PYTHON=0 and =1. 335/335 scope-resolution + graph
unit tests (was 339, net -4 after removing the hook-specific
assertions). tsc clean.

* refactor(scope-resolution): drop dead exports surfaced by knip

Knip flagged 44+ dead exports in the PR surface. Cleanup:

Barrel deletion:
- Remove src/core/ingestion/scope-resolution/index.ts entirely.
  It re-exported 30+ symbols but only one file
  (languages/python/scope-resolver.ts) imported from it, and only
  7 symbols. Matches the project's "no barrel re-exports" preference
  and removes a drift surface. scope-resolver.ts now imports from
  concrete files (passes/mro.ts, scope/walkers.ts, contract/...).

Dead functions/interfaces removed:
- resolvePythonScope + ResolvePythonScopeInput + ResolvePythonScopeStats
  in languages/python/scope-resolver.ts — never called. pipelinePhase
  reaches pythonScopeResolver via SCOPE_RESOLVERS, not via a
  per-language entry point.
- getScopeResolver in scope-resolution/pipeline/registry.ts — had zero
  callers. Consumers read SCOPE_RESOLVERS directly.

Exports demoted to module-internal (used only within their own file):
- PYTHON_SCOPE_QUERY (query.ts) + its re-export from python/index.ts
- PROF (cache-stats.ts)
- PythonArityMetadata (arity-metadata.ts)
- ReferenceSiteSkipSet (graph-bridge/references-to-edges.ts)
- ReceiverBoundProviderSubset (passes/receiver-bound-calls.ts)
- ResolveCompoundReceiverOptions interface (passes/compound-receiver.ts)
- matchingOpenParen function (passes/compound-receiver.ts)
- followChainPostFinalize function (passes/imported-return-types.ts)
- RunScopeResolutionInput + RunScopeResolutionStats (pipeline/run.ts)

Also removed:
- Redundant `export type { Scope }` re-export from contract/scope-resolver.ts
  (consumers import Scope directly from gitnexus-shared).

Verification: knip reports zero dead exports in PR-touched files.
204/204 test/integration/resolvers/python.test.ts both flag paths.
335/335 scope-resolution + graph unit tests. tsc clean.

---------

Co-authored-by: copilot-swe-agent[bot] <198982749+Copilot@users.noreply.github.com>
Co-authored-by: magyargergo <11230420+magyargergo@users.noreply.github.com>
Co-authored-by: Gergo Magyar <gergomagyar@icloud.com>
2026-04-21 15:50:00 +01:00
azizur100389
bd271da7b7
feat(cli): gitnexus remove <target> to unindex a registered repo by name or path (#664) (#1003)
* feat(cli): gitnexus remove <target> to unindex a registered repo by name or path (#664)

Add a `remove` CLI command that deletes the `.gitnexus/` index AND
unregisters a repo from the global registry (~/.gitnexus/registry.json),
addressing the lifecycle gap flagged in #664: previously users had to
cd into the repo to run `clean`, and there was no path-based or
alias-based remove for an already-deleted working tree.

- New command `gitnexus remove <target> [-f|--force]`. `<target>` is
  alias / basename-derived name / remote-inferred name / absolute path.
- New helper `resolveRegistryEntry(entries, target)` in repo-manager.ts
  with path > name precedence; throws RegistryNotFoundError or
  RegistryAmbiguousTargetError (typed, `kind`-discriminated).
- Atomicity mirrors `clean`: fs.rm first, then unregisterRepo; partial
  failures self-heal on next `listRegisteredRepos({ validate: true })`.
- Idempotent on unknown targets (exit 0 with warning) per the #664
  spec: "behave atomically and idempotently so retries are safe".
- `--force` uses `clean`-style confirmation-skip semantics — distinct
  from `analyze --force` (pipeline re-index); here there is no pipeline
  so no conflation.
- 7 new unit tests cover resolver precedence, case sensitivity,
  ambiguity, and not-found hints; 2 integration tests cover the real
  CLI -> registry -> filesystem chain including the --allow-duplicate-name
  (#829) ambiguity case.

* fix(cli): canonicalize repo paths so remove/register match across platforms (#1003 review)

Address review feedback from @evander-wang and @magyargergo on PR #1003
plus the Windows + macOS CI failure (same root cause).

Problem:
- macOS: /var is a symlink to /private/var. `path.resolve` does NOT
  follow symlinks, so a child running analyze in /var/folders/X stores
  /private/var/folders/X (realpath from OS cwd) but an outer caller
  passing the symlink form misses.
- Windows: GitHub runners surface tmpdirs in 8.3 short-name form
  (RUNNERA~1) while process.cwd() returns the long form (runneradmin).
  Same divergence.

Fix: new `canonicalizePath(p)` helper wraps `path.resolve` plus
`fs.realpathSync.native`, falling back to `path.resolve` when the path
doesn't exist (preserves idempotent-on-missing semantics needed by
`remove <unknown>`). Applied at 3 call-sites — registerRepo,
unregisterRepo, resolveRegistryEntry — canonicalising BOTH the input
and each stored `entry.path` at compare time. That last bit is the
backward-compat story: registries written by older versions
(pre-canonicalisation) still match correctly, so we don't need a
migration script.

Test side: the ambiguous-target integration test now reads the path
from the registry snapshot rather than passing the outer `repoA`
variable directly, so it exercises the registry contract regardless of
which path form the platform stores. 4 new unit tests cover the helper
(idempotent, fallback-on-missing, absolute-for-relative) plus the
backward-compat resolver path.

* fix(cli): store resolved (non-canonical) path, compare via canonicalizePath (#1003 CI)

Follow-up to c5eceba0. The previous commit canonicalised the repo path
at BOTH write-time AND compare-time in registerRepo — that expanded
Windows 8.3 short names (RUNNER~1) to long names (runneradmin) when
storing `entry.path`. Pre-existing #829 unit tests that assert
`path.resolve(err.existingPath) === path.resolve(tmpPath)` then broke
because `tmpPath` is still short-form (path.resolve doesn't expand
8.3) while `entry.path` was long-form (canonicalizePath does).

Fix: split storage from comparison.
- entry.path stores `path.resolve(repoPath)` — whatever form the
  caller passed. `list` output and error messages show the path the
  user typed.
- All compare points (existing-entry lookup in registerRepo, the
  collision guard, unregisterRepo, resolveRegistryEntry path tier)
  canonicalise BOTH sides via `canonicalizePath`. That is where the
  /var ↔ /private/var and RUNNER~1 ↔ runneradmin divergence actually
  matters.

Net effect: storage is tolerant (preserves user input), matching is
strict (canonical-vs-canonical). Pre-existing #829 tests stay green
because `err.existingPath` is unchanged from what `path.resolve` gives
back; the cross-platform CI failure from #1003 stays fixed because
every comparison path goes through `canonicalizePath`.

* fix(cli): refuse destructive fs.rm when registry storagePath isn't <repo>/.gitnexus (#1003 review)

Address @magyargergo's inline review finding on remove.ts:89 and the
sibling vulnerability in clean.ts --all (caught during a pre-commit
safety audit). ~/.gitnexus/registry.json is a user-writable plain-text
file, so a corrupted or hand-edited entry could point storagePath at
the repo root (catastrophic: rm the working tree), an empty string
(→ cwd), a parent dir, or anywhere else. fs.rm(recursive: true,
force: true) on any of those is a runtime disaster.

- New UnsafeStoragePathError + exported assertSafeStoragePath() in
  repo-manager.ts. Pure lexical string check (Windows-case-
  insensitive) asserting entry.storagePath === path.join(entry.path,
  '.gitnexus').
- Guard wired into BOTH destructive registry-trusting sites:
  - remove.ts: exit 1 with actionable hint
  - clean.ts --all: skip the poisoned entry with a warning and
    continue (preserves existing per-repo error tolerance — one bad
    entry doesn't halt the batch)
- clean.ts default path and server/api.ts are safe-by-construction
  (they recompute storagePath from findRepo / getStoragePath rather
  than trusting the registry field).
- 8 unit tests cover the guard (valid, repo-root, parent, empty,
  unrelated, sibling, error payload, Windows case).
- 2 integration tests prove the full CLI path: remove-poisoned exits
  1 without touching the working tree; clean --all with a poisoned
  sibling entry cleans the good entry, skips the bad one, and leaves
  the poisoned repo intact.

* test(cli): assert full remove dry-run + success output shape (#1003 NIT)

Address the one NIT from the senior-reviewer pass on PR #1003: the
integration test was only checking for the "Run with --force" hint in
dry-run output, not verifying that the three actual console.log lines
(alias, repo path, storage path) appear. Same weak check on the
success-branch "Removed" output.

Tighten both assertions to toContain(alias), toContain(entry.path),
toContain(storagePath). Catches silent format regressions — e.g. a
future refactor that drops a console.log line or swaps
entry.name/entry.path in the output.

No code change; +20 test lines. All assertions in the happy-path
integration test now fire for a meaningful reason.
2026-04-21 11:52:59 +01:00
ivkond
0909a908ee
fix(group): bubble local-impact phase errors in groupImpact (#1004) (#1007)
When the Phase 1 local-impact leg returned a structured { error: ... }
payload (missing symbol, graph-load failure, or an exception wrapped by
safeLocalImpact), runGroupImpact previously buried it inside a zero-hit
GroupImpactResult with empty cross / outOfScope arrays and risk 'UNKNOWN'.

Callers branch on top-level `error` (CLI, MCP wrapper), so the failure
path surfaced as a silent "no impact across the group" — a false
negative on a safety-critical blast-radius tool.

Fail closed: bubble the error as a top-level { error } prefixed with the
repoPath, matching how runGroupImpact already handles resolveGroupRepo,
config-load, and bridgePrep failures. Chose option 1 (bubble the error)
over option 2 (partial-result discriminant) because runGroupImpact only
runs local impact for a single member repo at this point — cross-repo
fan-out happens later via the bridge, so there is no partial success
data to preserve on the local-phase failure path.

Added two regression tests covering both the port-returned { error }
case and the thrown-exception case (wrapped by safeLocalImpact).

Made-with: Cursor
2026-04-21 11:44:16 +01:00
Copilot
f14068e09b
fix(fts): Don't cache failed FTS index ensure; invalidate on pool teardown (#1006)
* Initial plan

* Don't cache failed FTS index ensure; invalidate on pool teardown

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2026-04-21 08:50:33 +01:00
Jonas Vanderhaegen
06967e2b66
feat(extractors): add PHP HTTP consumer detection (#993)
Extend the PHP tree-sitter plugin to emit consumer HttpDetections for
three common PHP HTTP call shapes, matching Node plugin parity:

  - Laravel HTTP client:  Http::get/post/put/delete/patch($url)
  - Guzzle / generic:     $client->get/post/...($url)
  - file_get_contents($url) when the URL is absolute http(s)://

String-literal URLs only. Paths built via binary concatenation
(`$base . '/path'`), sprintf, or config lookups are intentionally
deferred — they need constant-folding of the enclosing scope to be
useful and are tracked as follow-up work.

Refs #992

Co-authored-by: Jonas Vanderhaegen <jonasvanderh+claude.ai@gmail.com>
2026-04-20 17:35:31 +01:00
Sam Fakhreddine
c24bcc3bf1
fix: expose detect-changes in direct CLI (#892)
Squashed commits:
- test: fix risk_level mock case and prettier formatting in tool-direct-cli.test
- test: add edge-case coverage for detectChangesCommand formatter
2026-04-20 17:12:25 +01:00
jisue0224
8f41a1ba17
fix(bm25): return FTS-matched symbols instead of arbitrary LIMIT 3 nodes (#806)
* fix(bm25): return FTS-matched symbols instead of arbitrary LIMIT 3 nodes

Previously, bm25Search fetched up to 3 arbitrary symbols from the matched
file using MATCH (n) WHERE n.filePath = $filePath LIMIT 3 (no ORDER BY).
This meant the specific function or class that actually scored highest in
the BM25 index could be completely absent from the results.

Fix: propagate nodeId from each FTS hit through searchFTSFromLbug, then
use those nodeIds in bm25Search to look up the exact matched nodes via
WHERE n.id IN $nodeIds. Falls back to the old filePath-based lookup when
nodeIds are unavailable.

Also switches the per-file score aggregation from naive sum-of-all to
sum-of-top-3, which prevents files with many mediocre matches (e.g. test
files) from outranking files with a single highly-relevant symbol.

* test(bm25): add unit tests for top-3 aggregation and nodeIds propagation

Covers the new logic paths added in the previous commit:
- top-3 score aggregation (file with 5+ matches → only top-3 contribute)
- nodeIds propagation through BM25SearchResult
- empty nodeId filtering
- cross-table merge for the same file
- result ranking by aggregated score

Also fixes in-place entries.sort() mutation (bm25-index.ts:125) to use
[...entries].sort() so the Map value is not silently modified.

* style: apply prettier formatting

* fix(test): use importOriginal to avoid missing export errors in vi.mock

* fix(bm25): align queryFTSViaExecutor nodeId extraction to match lbug-adapter

Use node.nodeId || node.id || '' in queryFTSViaExecutor to match the
fallback logic in lbug-adapter.ts:1040. Without this, the MCP pool path
could silently return empty nodeIds if LadybugDB surfaces the node id
under node.nodeId rather than node.id.

---------

Co-authored-by: jisue0224 <>
2026-04-20 17:06:58 +01:00
ivkond
00966630c4
feat: cross-repo impact analysis (#794) — @repo MCP routing + group resources (#984) 2026-04-20 11:55:07 +01:00
evolution
2b7cff5fd2
feat(embeddings): structural chunking with data-driven CHUNKING_RULES dispatch (#987)
* feat(embeddings): structural chunking with data-driven CHUNKING_RULES dispatch

Replace hardcoded label comparisons with a CHUNKING_RULES lookup table
that drives chunking strategy and text generation. Key changes:

- Data-driven dispatch: CHUNKING_RULES table maps labels to chunking
  mode (ast-function / ast-declaration), prefix/suffix, field grouping,
  and structural text mode
- Struct support: add Struct to AST declaration chunking with field
  grouping (same as Class)
- Multi-chunk context: preceding chunk tail (prevTail) injected into
  embedding text for cross-chunk coherence
- Version-gated hashes: EMBEDDING_TEXT_VERSION prefix in content hashes
  invalidates stale vectors when text template changes
- Compact container context: first declaration line preserved in every
  structural chunk for identity

* fix(embeddings): address PR review findings for CHUNKING_RULES refactor

- Remove LABEL_ENUM from STRUCTURAL_LABELS to avoid wasted AST parses
- Add maintenance note about extractStructuralNames and EMBEDDING_TEXT_VERSION
- Clarify CHUNK_MODE_CHARACTER is a no-op in CHUNKING_RULES
- Strengthen EMBEDDING_TEXT_VERSION test assertion to exact value

---------

Co-authored-by: wangjichao <wangjichao@inke.cn>
2026-04-20 08:25:31 +01:00
Copilot
9926804d75
feat(cli): infer registry name from git remote.origin.url (#981)
* Initial plan

* Plan: smarter index name inference via git remote URL

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* feat(cli): infer registry name from git remote.origin.url (#979)

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* refactor: skip git subprocess when --name was supplied (review feedback)

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* style: prettier --write on run-analyze.ts

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2026-04-19 09:14:14 +01:00
azizur100389
dae7bd3b3f
feat(cli): analyze --name <alias> + duplicate-name guard for the repo registry (#955) 2026-04-19 07:23:48 +01:00
Ryanba
363245eb63
fix: detect React component paths before lowercasing (#260) 2026-04-19 07:10:36 +01:00
Gergő Magyar
6222b5be9b
feat(ingestion): emit-references drains ReferenceIndex to graph edges (#925, RFC #909 Ring 2 PKG) (#973)
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2026-04-18 23:36:10 +01:00
Gergő Magyar
e2ba4a04c9
feat(ingestion): shadow-mode parity harness + static dashboard (#923, RFC #909 Ring 2 PKG) (#972)
* feat(ingestion): shadow-mode parity harness + static dashboard (#923, RFC #909 Ring 2 PKG)

Side-car observability for the RFC #909 registry rollout. Callers that
dual-run legacy-DAG + `Registry.lookup` feed their result pairs into
the harness; the harness diffs each pair via shared `diffResolutions`
(#918), aggregates via `aggregateDiffs`, and persists a per-language
parity report that the static dashboard can render offline.

## Shipped

### `gitnexus/src/core/ingestion/shadow-harness.ts` (new)

```ts
createShadowHarness(): ShadowHarness
```

API:
  - `enabled` — `true` iff `GITNEXUS_SHADOW_MODE` is truthy at
    construction. Captured once; later env-var mutations don't flip it.
  - `record({ language, callsite, legacy, newResult, primary })` —
    accumulator. No-op when `enabled === false` (near-zero overhead).
  - `size()` — diagnostic counter.
  - `snapshot(now?)` — deterministic `ShadowParityReport` from the
    accumulated diffs.
  - `persist(outputDir, now?)` — writes BOTH a timestamped
    `<runId>.json` and a `latest.json` pointer. Creates outputDir if
    absent. Returns the per-run file path.
  - `clear()` — resets the accumulator; preserves `enabled`.

Activation: `GITNEXUS_SHADOW_MODE` accepts `'true'` / `'1'` / `'yes'`
(case-insensitive, trimmed); same truthy convention as
`REGISTRY_PRIMARY_<LANG>` from #924. Typos → disabled (fail-safe).

Persisted payload (`PersistedShadowReport`) is schema-versioned (`v1`):

```jsonc
{
  "schemaVersion": 1,
  "runId": "YYYYMMDD-HHMMSS-xxxxxxxx",
  "generatedAt": "ISO 8601",
  "primaryByLanguage": { "python": "legacy", ... },
  "report": { /* ShadowParityReport from #918 aggregateDiffs */ }
}
```

`runId` prefix is the timestamp so files sort chronologically; the
entropy suffix prevents collisions within a clock-second.

### `gitnexus/shadow-parity-dashboard/index.html` (new)

Minimal static dashboard — one HTML file, zero build step, zero runtime
deps. Fetches `./latest.json` and renders:

  - Overall summary cards (total calls, both agree, disagree, overall parity %)
  - Per-language table: language tag ("primary: legacy" / "primary:
    registry" pill) + total / agree / only-legacy / only-new / disagree
    / both-empty / parity%
  - Parity cells colored by threshold: ≥95% green, ≥80% amber, <80% red
  - Light / dark via `prefers-color-scheme`
  - Empty-state message when no records yet

File-serving is static: `cp .gitnexus/shadow-parity/latest.json
gitnexus/shadow-parity-dashboard/` + open in a browser.

## Tests (14, all passing)

  - **Flag detection** (5): default off · truthy variants case-insensitive ·
    falsy / typo → off · record() is no-op when disabled · env flip
    AFTER construction doesn't enable (constructed-once semantics)
  - **Record + snapshot** (4): multi-language accumulation ·
    per-language rows with correct outcomes · snapshot determinism ·
    `clear()` resets accumulator + `primaryByLanguage`
  - **Persistence** (5): mkdir-p on missing outputDir · per-run +
    latest.json match byte-for-byte · schema v1 payload shape ·
    runId timestamp prefix sorts chronologically · empty report
    persists gracefully

Tests use a per-test tmpdir (`fs.mkdtemp`), cleaned in `afterEach`,
so parallel vitest runs don't collide. `GITNEXUS_SHADOW_MODE` is
saved + restored per-test.

## What's deliberately NOT in this PR (call-out in harness docstring)

  - **Dual-run dispatch.** The harness is a side-car — it does NOT
    invoke either resolution path. Call-processor integration that
    actually runs both legacy + registry paths lands as a follow-up.
    Without that integration, `record()` is never called in production
    today. The harness is tested in isolation with synthetic inputs.
  - **CI artifact publishing.** Config work to upload
    `latest.json` + the dashboard HTML per CI run. Tracked separately;
    the harness + dashboard are ready when the CI job wires in.
  - **Fixture-level drill-down.** The issue mentions per-fixture AST
    snippet + evidence trace drill-down. MVP dashboard shows per-language
    rows only; drill-down extends the static JSON format + the dashboard
    JS in a focused follow-up.

## Verification

  - `tsc --noEmit` clean (both `gitnexus-shared` and `gitnexus`)
  - 14/14 new tests pass
  - Full scope-resolution / shadow / model / flag suite: **335/335 pass**

## Part of

  - Parent: #909
  - Depends on (code): #917 (registries), #918 (diff + aggregate)
  - Unblocks Ring 3 language flips: the parity dashboard becomes the
    checkpoint before flipping `REGISTRY_PRIMARY_<LANG>=true` for a
    language — once per-language parity stabilizes, the flip ships.

* chore: prettier format on shadow-parity-dashboard index.html
2026-04-18 21:30:43 +01:00
Gergő Magyar
0c37eda482
feat(ingestion): per-language resolveImportTarget adapter (#922, RFC #909 Ring 2 PKG) (#971)
Bridges the CLI's existing per-language `ImportResolverFn`s (16 languages
already implemented) to the shared `FinalizeHooks.resolveImportTarget`
contract consumed by `finalize()` (#915) and
`finalizeScopeModel` (#921).

No resolver logic is reimplemented — the adapter wraps
`provider.importResolver` from each `LanguageProvider` verbatim.

## Shipped

### `import-target-adapter.ts` (new)

```ts
buildImportTargetWorkspace(providers, resolveCtx): ImportTargetWorkspace
resolveImportTargetAcrossLanguages(targetRaw, fromFile, workspaceIndex): string | null
```

  - `ImportTargetWorkspace` is the opaque `workspaceIndex` shape the
    adapter recognizes: `{ perLanguage: Map<SupportedLanguages,
    { resolver, ctx }> }`. Callers build it once per ingestion run from
    the active language providers.
  - `resolveImportTargetAcrossLanguages` is the `FinalizeHook`
    implementation. It:
      1. Reads `getLanguageFromFilename(fromFile)`.
      2. Looks up the per-language entry.
      3. Calls the existing `ImportResolverFn` — same signature, same
         code path the legacy DAG uses today.
      4. Picks `result.files[0]` (covers both `'files'` and `'package'`
         result kinds; the legacy pipeline's richer multi-file + dirSuffix
         semantics stay accessible through `importResolver` directly).
      5. Returns `null` on any null result, empty files[], unknown
         extension, missing workspace, or resolver exception.
  - Exceptions from resolvers are swallowed — the finalize algorithm
    treats `null` as `linkStatus: 'unresolved'`, which is the right
    fallback for malformed inputs.

### What's deliberately NOT here

  - **Re-implementation of any per-language resolver.** Wraps the
    existing `importResolver` field on each provider.
  - **Dynamic-import handling.** The shared finalize algorithm short-
    circuits `ParsedImport { kind: 'dynamic-unresolved' }` before
    calling `resolveImportTarget`, so the adapter never sees them.
  - **`importPathPreprocessor`.** Preprocessing belongs inside the
    provider's `interpretImport` hook that produces
    `ParsedImport.targetRaw`; the adapter forwards that verbatim.

## Tests (12, all passing)

  - **`buildImportTargetWorkspace`** (3): registers providers with
    importResolver · skips providers without · threads shared ctx
    into every entry
  - **`resolveImportTargetAcrossLanguages`** (9): forwards targetRaw +
    fromFile · dispatches by extension · null resolver result →
    null · `package`-kind takes first file · empty files[] → null ·
    no registered resolver → null · unknown extension → null ·
    undefined/malformed workspace → null · resolver throw → null

Real per-language resolver correctness is covered by the existing
per-language resolver test suites — the adapter is the bridge layer.

## Verification

  - `tsc --noEmit` clean (both `gitnexus-shared` and `gitnexus`)
  - `gitnexus-shared` build clean
  - 12/12 new tests pass
  - Full scope-resolution / shadow / model / flag suite: **333/333 pass**

## Integration flow

```ts
const workspace = buildImportTargetWorkspace(providers, resolveCtx);
const indexes = finalizeScopeModel(parsedFiles, {
  hooks: { resolveImportTarget: resolveImportTargetAcrossLanguages },
  workspaceIndex: workspace,
});
model.attachScopeIndexes(indexes);
```

## Closes part of #909. Unblocks

  - Ring 3 language migrations (#926+): a language flipping to
    `REGISTRY_PRIMARY_<LANG>=true` now has correct import-target
    resolution out of the box via its existing `importResolver`.
  - #923 shadow harness — can run the dual-path comparison knowing
    both sides use the same per-language resolution semantics.
2026-04-18 21:11:24 +01:00
Gergő Magyar
25520e90a5
feat(ingestion): finalize-orchestrator materializes ScopeResolutionIndexes (#921, RFC #909 Ring 2 PKG) (#970)
Ties the Ring 2 pipeline together. Takes the `ParsedFile[]` produced by
#920's parse-worker integration, feeds them to shared `finalize()`
(#915), and bundles every workspace-wide index for attachment onto
`MutableSemanticModel`. Thin integration glue per issue #884's boundary
— all algorithm lives in `gitnexus-shared`.

## Shipped

### `model/scope-resolution-indexes.ts` (new)

```ts
interface ScopeResolutionIndexes {
  readonly scopeTree: ScopeTree;
  readonly defs: DefIndex;
  readonly qualifiedNames: QualifiedNameIndex;
  readonly moduleScopes: ModuleScopeIndex;
  readonly methodDispatch: MethodDispatchIndex;
  readonly imports: ReadonlyMap<ScopeId, readonly ImportEdge[]>;
  readonly bindings: ReadonlyMap<ScopeId, ReadonlyMap<string, readonly BindingRef[]>>;
  readonly referenceSites: readonly ReferenceSite[];
  readonly sccs: readonly FinalizedScc[];
  readonly stats: FinalizeStats;
}
```

The bundle produced by the orchestrator, consumed by the resolution
phase. `ReferenceIndex` is deliberately NOT here — it's populated in
the next phase (#925).

### `model/semantic-model.ts` — extended

  - `SemanticModel.scopes?: ScopeResolutionIndexes` — undefined until
    attached; once attached, frozen.
  - `MutableSemanticModel.attachScopeIndexes(indexes)` — one-shot write.
    Throws on second call; `Object.freeze`s the bundle on write. `clear()`
    resets the slot back to `undefined` so re-ingestion can re-attach.

### `finalize-orchestrator.ts` (new)

```ts
finalizeScopeModel(parsedFiles, options?): ScopeResolutionIndexes
```

Orchestration steps:

  1. Map `ParsedFile[]` → `FinalizeInput` (`FinalizeFile` is a structural
     subset, so no shape-shifting).
  2. Call shared `finalize()` with provider hooks (defaults provided for
     the zero-provider case today).
  3. Build the four workspace indexes (`DefIndex`, `QualifiedNameIndex`,
     `ModuleScopeIndex`, `ScopeTree`) from per-file unions.
  4. Build an empty `MethodDispatchIndex` as a placeholder (owners=[],
     both callbacks return []). Real MRO wiring lands with the
     per-language adapters in #922.
  5. Bundle + return.

**Empty-input safety.** Zero parsedFiles → valid but empty bundle with
all zero-sized indexes and `stats.totalFiles === 0`. Downstream code
can consult `model.scopes` without branching on presence — only on
`stats`.

**Hook defaults** (`withDefaultHooks`) for missing provider hooks:

  - `resolveImportTarget: () => null` — every import goes `unresolved`
  - `expandsWildcardTo: () => []` — wildcards don't materialize
  - `mergeBindings: (a, b) => [...a, ...b]` — append without precedence

Providers override these in #922 (per-language import adapters).

## Tests (10, all passing)

  - **Empty input** (1): zero parsedFiles → valid empty bundle
  - **Single file** (2): all per-file indexes populated · referenceSites
    aggregated
  - **Cross-file imports** (3): resolveImportTarget threads through +
    links · default-null resolver → unresolved · stats reflect graph
  - **MutableSemanticModel integration** (4): undefined initially · attach
    once · Object.freeze applied · throws on re-attach · clear() resets

## Verification

  - `tsc --noEmit` clean in both packages
  - `gitnexus-shared` build clean
  - 10/10 new tests pass
  - Full scope-resolution / shadow / model / flag suite: **321/321 pass**

## What's deferred (not this PR, per RFC #909 scope)

  - **Per-language hook adapters** (#922): `resolveImportTarget` +
    `expandsWildcardTo` + `mergeBindings` wired per language.
  - **MethodDispatchIndex wiring via HeritageMap**: populate MRO + implements
    via the existing CLI-package HeritageMap strategies. Likely companion
    to #922 or a focused follow-up.
  - **Pipeline invocation**: actually calling `finalizeScopeModel` from
    the real ingestion pipeline. The orchestrator is callable today; the
    ingestion entry point wiring lands with the shadow harness (#923).
  - **`ReferenceIndex` population**: RFC §3.2 Phase 4 / #925.

## Closes part of #909. Unblocks
  - #923 shadow harness — now has a fully materialized `model.scopes` to
    query against the legacy DAG for parity measurement
  - #925 ReferenceIndex → LadybugDB emission — consumes `model.scopes`
  - Ring 3 language migrations (#926+) — a language flipping to
    `REGISTRY_PRIMARY_<LANG>=true` can now expect `model.scopes` to be
    populated when the pipeline wires the orchestrator in
2026-04-18 20:51:19 +01:00
Gergő Magyar
39b5d295c7
feat(ingestion): wire ScopeExtractor into parse-worker + processor (#920, RFC #909 Ring 2 PKG) (#969)
Plumbs the ScopeExtractor (#919) into the real parsing pipeline.
`ParsedFile` artifacts now flow from workers to the parsing-processor
without changing any legacy-DAG behavior.

## Shipped

### `gitnexus/src/core/ingestion/scope-extractor-bridge.ts` (new)

  - `extractParsedFile(provider, sourceText, filePath, onWarn?)`
  - Short-circuits (returns `undefined`) when the provider has not
    implemented `emitScopeCaptures`. True for every language today —
    this is the default no-op path.
  - Invokes the hook + `ScopeExtractor.extract`, returns a `ParsedFile`.
  - **Swallows exceptions on both sides.** Failures route through the
    optional `onWarn` callback (or `console.warn`) and return
    `undefined`. Scope-extraction errors NEVER break legacy parsing on
    the same file.
  - Standalone module (not nested in `parse-worker.ts`) so tests can
    import it directly without triggering the worker's top-level
    `parentPort!.on(...)`.

### `gitnexus/src/core/ingestion/workers/parse-worker.ts`

  - `ParseWorkerResult.parsedFiles: ParsedFile[]` added.
  - `processFileGroup` calls `extractParsedFile` AFTER tree parse,
    BEFORE legacy extraction. Worker provides an `onWarn` callback that
    routes bridge warnings through `parentPort.postMessage({ type:
    'warning', message })`.
  - `mergeResult` includes `parsedFiles` in the sub-batch merge.
  - Initial + reset accumulator templates include `parsedFiles: []`.

### `gitnexus/src/core/ingestion/parsing-processor.ts`

  - `WorkerExtractedData.parsedFiles: ParsedFile[]` added.
  - Empty-result branch and the across-chunk aggregation both include
    `parsedFiles`. Aggregation is tolerant of workers that don't emit
    the field (older builds / partial rollouts).

### Ring 1 tweak: `emitScopeCaptures` sync return

`readonly CaptureMatch[]` (was `Promise<readonly CaptureMatch[]>`).
Tree-sitter and COBOL's regex tagger are both synchronous; no
foreseeable need for async work inside this hook. Sync lets the
already-sync worker pipeline invoke it inline without cascading
`async` up through the batch driver + IPC handler.

## Tests (9 new; full suite 311/311)

`gitnexus/test/unit/scope-resolution/parse-worker-scope-integration.test.ts`:
  - Not-migrated (2): undefined-returning hook · never-invokes-extractor
  - Migrated (3): happy path · argument threading · honors
    `shouldCreateScope` override
  - Error resilience (4): hook throws · extractor throws (no Module) ·
    extractor throws (sibling overlap) · `onWarn` gets routed
    message with filePath + error body

## Verification

  - `tsc --noEmit` clean in both packages
  - `gitnexus-shared` build clean
  - 311/311 combined scope-resolution / shadow / model / flag suite
  - 9/9 new bridge tests

## What's NOT in this PR (still deferred to #921)

  - Actually using the `parsedFiles` — that's the finalize orchestrator.
  - `ModuleScopeIndex.byFilePath` materialization — belongs alongside
    the rest of the SemanticModel indexes in #921.

## Closes part of #909. Unblocks
  - #921 finalize-orchestrator — consumes `WorkerExtractedData.parsedFiles`
2026-04-18 20:27:56 +01:00
Gergő Magyar
eece6344fc
feat(ingestion): REGISTRY_PRIMARY_<LANG> per-language flag reader (#924, RFC #909 Ring 2 PKG) (#968)
Adds the per-language feature flag primitive that gates the Ring 3
registry-primary rollout. Single source of truth for whether a given
language uses `Registry.lookup` (new) or the legacy DAG (current).

## Shipped

### `gitnexus/src/core/ingestion/registry-primary-flag.ts`

  - `isRegistryPrimary(lang): boolean` — reads
    `REGISTRY_PRIMARY_<UPPER(enum-value)>` from `process.env`.
  - `envVarNameFor(lang): string` — exposed for CI tooling that
    cross-references flag flips (and for test assertions).
  - `primaryLanguages(): ReadonlySet<SupportedLanguages>` — all
    currently-on languages; useful for startup logging + the #923
    shadow dashboard which distinguishes "primary: legacy" vs
    "primary: registry" rows.

### Contract

  - Default: `false` for every language. A language must explicitly
    opt in by setting its env var.
  - Truthy: `'true'`, `'1'`, `'yes'` (case-insensitive, whitespace-
    trimmed). Anything else — typos, empty string, `'off'` — is
    `false`. Fail-safe posture: a misspelled flag doesn't accidentally
    flip a language.
  - No per-process caching. `process.env` is read per call; overhead
    is negligible (one lookup per file at resolution time), and
    test isolation is lexical (no cache-reset coordination).

### Env-var mapping

Uses the enum VALUE, not the TS key, for the env-var suffix:

  - `SupportedLanguages.Python`     → `REGISTRY_PRIMARY_PYTHON`
  - `SupportedLanguages.CPlusPlus`  → `REGISTRY_PRIMARY_CPP`   (value `'cpp'`)
  - `SupportedLanguages.CSharp`     → `REGISTRY_PRIMARY_CSHARP`

Users flip languages by their canonical name, not the TS symbol.

## Tests (16, all passing)

  - `envVarNameFor` (3): upper-casing · enum-VALUE-not-KEY mapping ·
    all-languages uniqueness smoke-test
  - `isRegistryPrimary` (9): default false · `'true'` / `'1'` / `'yes'`
    truthy · mixed-case + whitespace-padded · falsy-looking values ·
    unrecognized tokens (typo-safe) · per-language isolation · no
    stale cache on mid-process mutation · CPlusPlus mapping
  - `primaryLanguages` (3): empty · exact membership · Set instanceof

Tests scrub every `REGISTRY_PRIMARY_*` env var in `beforeEach` +
`afterEach` so parallel vitest runs on the same process don't bleed state.

## What's NOT in this PR (deferred by design)

The actual integration in `call-processor.ts` belongs in #921
(finalize-orchestrator). Reason: the "new path" requires a populated
`SemanticModel` to call `Registry.lookup` against, and the model
becomes accessible only after #921 orchestrates finalize. Wiring a
dead branch now would just get rewritten then.

This PR ships the flag primitive in isolation so #921 has a clean,
tested utility to consult — and so `#923` (shadow harness) has a
stable boolean to read for its "which row is primary?" rendering.

## Closes part of #909. Unblocks
  - #921 finalize-orchestrator — can now consult `isRegistryPrimary`
    at resolution time
  - #923 shadow harness — can distinguish primary-flipped rows
2026-04-18 19:54:54 +01:00
Gergő Magyar
c6a291de67
feat(ingestion): ScopeExtractor driver — 5-pass CaptureMatch → ParsedFile (#919, RFC #909 Ring 2 PKG) (#965)
* feat(ingestion): ScopeExtractor driver — 5-pass CaptureMatch → ParsedFile (#919, RFC #909 Ring 2 PKG)

Kicks off Ring 2 PKG. Implements RFC §5.3 + §3.2 Phase 1: the central,
source-agnostic driver that turns a language provider's `CaptureMatch[]`
into a `ParsedFile` — the per-file artifact the finalize orchestrator
(#921) feeds into the shared `finalize()` algorithm (#915).

## Files

### New shared contracts
  - `gitnexus-shared/src/scope-resolution/parsed-file.ts`
    Per-file extraction artifact: scopes, parsedImports, localDefs,
    referenceSites. Structural superset of `FinalizeFile` so the
    finalize orchestrator threads `ParsedFile` through unchanged.
  - `gitnexus-shared/src/scope-resolution/reference-site.ts`
    Pre-resolution usage fact: name, atRange, inScope, kind, optional
    callForm/explicitReceiver/arity. Converted to `Reference` records
    by the resolution phase (populates `ReferenceIndex`).

### Ring 1 collateral tweak
  - `language-provider.ts: emitScopeCaptures` now returns
    `Promise<readonly CaptureMatch[]>` (was `readonly Capture[]`).
    Pre-grouping per tree-sitter match is the provider's job — the
    extractor expects coherent matches, not flat captures. No
    consumers yet (all languages still on legacy DAG), so no breakage.
    Docstring updated.

### New CLI module
  - `gitnexus/src/core/ingestion/scope-extractor.ts`
    Single entry point: `extract(matches, filePath, provider): ParsedFile`.
    Five-pass pipeline:

      Pass 1 — Build scope tree. `@scope.*` → `ScopeDraft[]` via
        range-containment parent derivation. Honors
        `provider.shouldCreateScope` (skip-but-reparent-children) and
        `provider.resolveScopeKind`. Throws `ScopeTreeInvariantError`
        via `buildScopeTree` on malformed input.

      Pass 2 — Attach declarations + local bindings. `@declaration.*`
        → `SymbolDefinition` + `BindingRef { origin: 'local' }`.
        Default attachment: innermost containing scope. Hoisting via
        `provider.bindingScopeFor`.

      Pass 3 — Collect raw imports. `@import.*` → `ParsedImport` via
        `provider.interpretImport`. Attached to ParsedFile
        (finalize resolves owning scope in Phase 2).

      Pass 4 — Collect type bindings. `@type-binding.*` →
        `TypeRef` via `provider.interpretTypeBinding` →
        `scope.typeBindings`. Hoistable via `bindingScopeFor`.

      Pass 5 — Collect reference sites. `@reference.*` →
        `ReferenceSite[]`. Call form from declarative sub-tag
        (`@reference.call.member`) or `provider.classifyCallForm`.

### Tests
  - `gitnexus/test/unit/scope-resolution/scope-extractor.test.ts`
    23 tests organized by pass + one end-to-end fixture exercising
    all 5 passes together. MockProvider emits synthetic
    `CaptureMatch[]` with no AST — extractor is pure given those.

## Design notes

- **Source-agnostic.** No `Tree` / `SyntaxNode` types leak into the
  driver. Works for tree-sitter providers and COBOL's regex tagger.
- **One AST walk per language.** Providers do the walk inside
  `emitScopeCaptures`; this driver does zero traversal.
- **Invariants delegated.** `ScopeTree.buildScopeTree` enforces
  structural rules (non-Module has parent, parent contains child,
  siblings don't overlap). The extractor doesn't try to repair
  malformed captures.
- **Sub-tag whitelist.** `@reference.receiver`, `@declaration.name`,
  `@import.source`, etc. are known sub-tags — excluded from anchor
  selection so the broadest-range heuristic doesn't mis-identify them
  as anchors for their topic. Bug surfaced in the end-to-end fixture
  test (member call with a large-range receiver) and was fixed before
  commit.

## Verification

  - `tsc --noEmit` clean (both `gitnexus-shared` and `gitnexus`)
  - `gitnexus-shared` build clean
  - 23/23 new tests pass
  - Full scope-resolution / model / shadow suite: **285/285 pass**

## Closes part of #909. Unblocks
  - #920 parse-worker integration (emit ParsedFile from the worker)
  - #921 finalize orchestrator (consume ParsedFile[] workspace-wide)
  - #922 per-language import adapters

* chore(ingestion): address #919 review findings on the extractor

Addresses all 5 items from the PR #965 review in-PR.

## Structural changes

- **Extract `ScopeExtractorHooks` as the narrow dependency surface.**
  The extractor now declares its dependency on a `Pick`-narrowed subset
  of `LanguageProvider` (just the 6 scope-resolution hooks it actually
  reads). Test mocks implement exactly that interface — no more
  `as unknown as LanguageProvider` cast hiding missing-field bugs.
  Adding a new hook read becomes a compile error, not a silent test
  pass. (Finding 3.2)

- **Remove dead `ownerDefIdFor` stub + `isOwnerKind` helper.** The
  function always returned `undefined` with `void innermost; void
  drafts;` suppressors — an incomplete-implementation signal. The code
  path was also misleading: creating a clone of the def with
  `ownerId: undefined` is structurally identical to keeping the
  original. Pass 2 now keeps the def as-is. Contract is documented in
  a code comment: providers that need `ownerId` set it from their
  declaration hook; `finalize` (via #914 `MethodDispatchIndex`) fills
  in method/field `ownerId` in a post-extraction pass that has full
  def visibility. (Finding 2.1)

- **Standardize `filePath` threading across passes 4 and 5.** Pass 4
  was reading `drafts[0]!.filePath`; pass 5 was reading
  `anyFilePathFromScopeTree(scopeTree)`. Both equivalent but
  inconsistent. Both now take `filePath` as a parameter from the
  top-level `extract()` call. The `anyFilePathFromScopeTree` helper is
  removed. (Finding 2.2)

## Documentation

- **Snapshot-semantics comment on `scopeTree` + `positionIndex`.** The
  hooks called during Passes 2-5 receive a `scopeTree` built BEFORE any
  bindings/ownedDefs/typeBindings were written. Hooks MUST NOT rely on
  `scope.bindings` etc. being populated — they're for parent/range/kind
  queries only. Added a doc block at the `scopeTree`/`positionIndex`
  construction site so future Ring 3 implementers don't write a
  `classifyCallForm` that reads bindings. (Finding 2.3)

## Tests

- **Regression for the anchor-vs-receiver bug** (Finding 3.1): a
  member-call match where `@reference.receiver` spans columns 0-10
  (wider) and the call name spans 11-15 (narrower). Without the
  `KNOWN_SUB_TAGS` exclusion, the broadest-range heuristic would have
  picked the receiver; the test pins that the call name is the one
  that ends up in `referenceSites[0].name`.

- **Mock provider now types exactly `ScopeExtractorHooks`**, no more
  double-cast. Any future hook added to `extract()` that isn't in
  `ScopeExtractorHooks` is a compile error.

## Verification

- `tsc --noEmit` clean in both `gitnexus-shared` and `gitnexus`
- `gitnexus-shared` build clean
- 24/24 scope-extractor tests pass (+1 regression)
- Full scope-resolution / model / shadow suite: **286/286 pass**
2026-04-18 19:28:51 +01:00
Gergő Magyar
e944f90879
chore(shared): apply Ring 2 SHARED review follow-ups in one diff (#964)
* chore(shared): apply Ring 2 SHARED review follow-ups in one diff

Aggregates all actionable follow-ups from the 9 Ring 2 SHARED PRs
(#949–#963) before proceeding to Ring 2 PKG. No behavior changes;
docstring edits, test refinements, and one structural cleanup.

## #913 (DefIndex / ModuleScopeIndex / QualifiedNameIndex)
  - Rename `freezeIndex` → `wrapIndex` across all three index builders.
    The old name implied `Object.freeze` on the wrapper, which we never
    applied; `wrapIndex` more accurately describes the lightweight
    readonly-interface wrap. Safety surface (frozen bucket arrays,
    frozen miss-empty array, readonly Maps) is unchanged.
  - Document in `buildModuleScopeIndex` JSDoc that callers must
    pre-normalize `filePath` keys (no path-separator canonicalization
    happens here). Prevents silent cross-platform misses.
  - Add an explicit hit-path freeze assertion in
    `qualified-name-index.test.ts` (the existing test covered only the
    miss-path `EMPTY` array).

## #914 (MethodDispatchIndex)
  - Differentiate the C3 and BFS test cases: both tests now use
    distinct MRO orderings so they prove the materializer stores
    whatever order the `computeMro` callback produces (not that C3 and
    BFS yield identical output).
  - Add `implementsOfCalls` counter in the first-write-wins test, and
    document the call-count contract in `MethodDispatchInput.implementsOf`
    JSDoc: `implementsOf` fires **per occurrence** in `input.owners`
    (not per unique owner); `computeMro` fires at most once per unique
    owner. Callers with expensive `implementsOf` implementations should
    pre-dedupe `owners`.

## #916 (resolveTypeRef)
  - Document the deliberate exclusion of `'Type'` from `TYPE_KINDS`
    (verified no extractor in `gitnexus/src/core/ingestion/` emits
    `type: 'Type'` for annotation-relevant symbols).
  - Rename the namespace-origin test from `'resolves ...'` to
    `'returns null for a namespace-origin binding whose def is not a
    type kind'`, matching the failure-case intent.

## #918 (shadow diff + aggregate)
  - Remove the partial re-export `export type { ShadowAgreement, ShadowDiff };`
    from `aggregate.ts` — it omitted `ShadowCallsite` and diverged
    from the top-level barrel. Consumers import all three from the
    `gitnexus-shared` entry point.
  - Fix the invalid `'wildcard'` evidence kind in `diff.test.ts` fixture
    (that kind is not a valid `ResolutionEvidence.kind`). Replaced with
    `'global-name'`, a real kind the test treats identically.

## #912 (ScopeTree / PositionIndex / makeScopeId)
  - Document the touching-boundary semantics on `PositionIndex.atPosition`:
    when siblings share a boundary point, the right (later-start) sibling
    wins per the existing innermost-wins sort contract.
  - Resolve the layer-inversion flagged by review: move `ScopeLookup`
    from `resolve-type-ref.ts` to `types.ts` (its natural home in the
    data-model layer). `scope-tree.ts` now imports `ScopeLookup` from
    `types.js` directly; the old re-export from `resolve-type-ref.ts`
    is removed per repo convention (`feedback_no_reexport`). Barrel
    export moved alongside.

## #917 (ClassRegistry / MethodRegistry / FieldRegistry)
  - Replace the dangling "try a name-match among class-like defs"
    comment in `lookupReceiverType` with explicit prose that callers
    must pre-resolve via `resolveTypeRef` if they want richer semantics.
    No behavior change — the function already returned `undefined` on
    ambiguous/missing qnames.
  - Fix `tieBreakKey.origin` default for pure Step-2 candidates.
    Type-binding-only hits no longer falsely inherit `'local'` from
    `ensureCandidate`'s neutral default; they now demote to `'import'`
    on their first type-binding hit, and only a later Step-1 lexical
    hit can upgrade them back to `'local'`. Keeps the Appendix B
    cascade faithful to the true origin.
  - Document `'global-name'` in `evidence.ts`: currently reserved for
    Ring 3's byName global index; `lookupCore` never emits it today.
    The weight stays live so `composeEvidence` remains exhaustive over
    the origin union.
  - Rename the mislabeled Step-7 test from `'confidence DESC is the
    primary key'` (which actually tested hard-shadow baseline) to
    `'inner scope shadows outer, yielding single result'`, and add a
    separate test that actually exercises multi-candidate confidence
    ordering (local vs wildcard at the same scope).

## Verification
  - `tsc --noEmit` clean (both `gitnexus-shared` and `gitnexus`)
  - `gitnexus-shared` build clean
  - Combined scope-resolution / model / shadow suite: **260/260 pass**
    (+1 from the new multi-candidate ordering test in #917)

## Not addressed (non-actionable)
  - #949 CI "failure with zero failing tests": pre-existing Swift Node 22
    grammar flake unrelated to #910 scope.
  - #950: the two non-blocking findings were already addressed in
    follow-up commit `cbac32ba` (ParsedImport discriminated union +
    `ScopeId | null` on the two hooks).
  - #915: the five in-scope findings were already addressed in
    follow-up commit `54515a7e` (dead code, unused params, multi-hop
    docs, cap-hit test, stats granularity).
  - #915 LanguageProvider.resolveImportTarget signature divergence +
    `findDefById` O(F×D) perf: tracked separately as follow-up issues
    for the Ring 3 migration window.

* chore(shared): address ce:review findings on the follow-up diff

ce:review (interactive) on PR #964 surfaced two P2s and several P3s. This
commit applies all `safe_auto` fixes + both manual tests in-line so the
PR ships with a cleaner review trail.

## P2 fixes

- **Complete `freezeIndex` → `wrapIndex` rename.** The prior commit renamed
  3 of 5 sibling index files; `method-dispatch-index.ts` and
  `position-index.ts` still carried the old name. Now all 5 helpers use
  the consistent `wrapIndex` naming.
  (maintainability + project-standards reviewers both flagged this.)

- **Add regression tests for the `recordTypeBindingHit` origin demotion.**
  The prior commit introduced the `tieBreakKey.origin = 'import'`
  demotion for Step-2-only candidates without a direct test. Added:
    - `registries.test.ts`: two Step-2-only siblings under the same
      interface, asserting deterministic DefId.localeCompare tie-break
      AND the stronger invariant that composeEvidence never emits a
      where-found signal for Step-2-only candidates (no `signals.origin`).
    - `position-index.test.ts`: touching-boundary test proving the
      right-sibling-wins rule documented in the new JSDoc.
  (testing + kieran-typescript + api-contract reviewers all flagged these gaps.)

## P3 fixes

- Fix wrong comment in `recordTypeBindingHit` that claimed Step 1 could
  later upgrade a demoted origin. Step 1 runs BEFORE Step 2 — the actual
  upgrade path is Step 3 (`seedFromOwnerScopedContributor`). Comment now
  describes execution order correctly.

- Fix inaccurate "re-exported there" comment in `index.ts`. `types.ts`
  *defines* ScopeLookup natively; it's not a re-export. Phrasing now
  says "defined in types.ts and exported from the type-export block
  above — not from this module."

- Update stale `scope-tree.ts` file-header prose that still referenced
  `ScopeLookup` as living in #916/resolve-type-ref.ts. Now points to
  `./types.js` with a cross-ref to both #916 and #917 consumers.

- Expand `atPosition` touching-boundary JSDoc to name the mechanism
  (backward scan through start-sorted array) so readers can trace the
  binary-search code to the claim.

- Add breadcrumb to `aggregate.ts` module header pointing future readers
  to `./diff.ts` / the top-level barrel for `ShadowAgreement`,
  `ShadowCallsite`, and `ShadowDiff`.

- Remove unnecessary non-null assertion in `recordTypeBindingHit`. Local
  `const existingMroDepth = ...` lets TS narrow to `number` in the
  else-branch, eliminating the `!` without behavior change.

## Verification

- `tsc --noEmit` clean (both `gitnexus-shared` and `gitnexus`)
- `gitnexus-shared` build clean
- Combined scope-resolution / model / shadow suite: **262/262 pass** (+2
  from the new origin-demotion + touching-boundary regression tests)
2026-04-18 18:40:29 +01:00
Gergő Magyar
1bf9fb4ef1
feat(shared): ClassRegistry / MethodRegistry / FieldRegistry + 7-step lookup (#917, RFC #909 Ring 2 SHARED) (#963)
Capstone of Ring 2 SHARED. Implements RFC §4 — the shared, scope-aware
resolution surface the rest of the semantic model feeds into.

## Modules (`gitnexus-shared/src/scope-resolution/registries/`)

  - `context.ts`         — `RegistryContext` bundling ScopeTree / DefIndex
                           / QualifiedNameIndex / ModuleScopeIndex /
                           MethodDispatchIndex + provider hooks.
                           Narrows Ring 1's opaque `RegistryContributor`
                           to concrete `OwnerScopedContributor`.
  - `tie-breaks.ts`      — `compareByConfidenceWithTiebreaks`, the RFC
                           Appendix B cascade: confidence DESC → scope
                           depth ASC → MRO depth ASC → ORIGIN_PRIORITY
                           ASC → DefId.localeCompare.
  - `evidence.ts`        — `composeEvidence(signals)` / `confidenceFromEvidence`.
                           Translates raw walk signals into the typed
                           `ResolutionEvidence[]` using authoritative
                           `EvidenceWeights`. No magic numbers.
  - `lookup-qualified.ts`— RFC §4.5. Qualified-name fast path consumed
                           by `resolveTypeRef` dotted fallback and by
                           Step 6 of lookup-core.
  - `lookup-core.ts`     — The 7-step canonical algorithm. Pure. Param-
                           eterized by `CoreLookupParams`.
  - `{class,method,field}-registry.ts`
                         — Thin wrappers over `lookupCore` that fix
                           `acceptedKinds` + `useReceiverTypeBinding` per
                           kind. `buildClassRegistry` / `buildMethodRegistry`
                           / `buildFieldRegistry` factory functions.

## RFC §4.2 algorithm contract (honored verbatim)

  1. Lexical scope-chain walk. Hard shadow on any `scope.bindings.has(name)`
     regardless of kind survivorship.
  2. Type-binding resolution (methods/fields only, opt-in via
     `useReceiverTypeBinding`). MRO walk via `MethodDispatchIndex.mroFor`.
     MRO-depth-decayed weight via `typeBindingWeightAtDepth`.
  3. Owner-scoped contributor — when the caller knows the receiver owner,
     its direct members merge in as `origin: 'local'`.
  4. Kind filter — `acceptedKinds` per registry; `kind-match` evidence
     at weight 0 is always emitted for debuggability.
  5. Arity filter — `provider.arityCompatibility` per candidate. When at
     least one compatible candidate exists, incompatibles are dropped;
     otherwise the −0.15 penalty alone disambiguates (they stay in the
     result, just ranked lower).
  6. Global fallback — fires only when Steps 1-3 produced NO candidates
     AND the name is dotted. Delegates to `lookupQualified`.
  7. Rank + tie-break — evidence list sorted by the Appendix B cascade.

## §4.7 invariants asserted in tests

  - No tier vocabulary in the return type (`Resolution`, not `TierXResult`).
  - Confidence is per-candidate (not per-tier).
  - Shadowing is a HARD filter; globals are consulted ONLY when lexically
    empty.
  - Caller can read `[0]` for one-shot answers.
  - `Resolution.confidence` is capped at 1.0.
  - `kind-match` is always emitted (weight 0).

## Unresolved-import + dynamic-unresolved evidence shape

  - `BindingRef.via.linkStatus === 'unresolved'` applies the
    `unlinkedImportMultiplier` (0.5×) to the where-found signal only.
    Corroborators (`arity-match`, `owner-match`, `type-binding`) remain
    unaffected — the RFC §4v2 capped-signal rule applies per-signal, not
    per-candidate.
  - `BindingRef.via.kind === 'dynamic-unresolved'` adds a degraded
    `dynamic-import-unresolved` evidence signal at weight 0.02.

## Tests (28 in registries.test.ts, 259/259 combined)

Organized per RFC §4.2 step so a regression localizes to the step it broke:

  - Step 1: local + walk-to-parent + hard-shadow + origin=import
  - Step 2: explicit receiver type-binding + MRO depth decay on ancestor
  - Step 3: owner-scoped contributor + owner-match
  - Step 5: drop-incompatible-when-compatible-exists + soft-penalty-when-all-
            incompatible + unknown-when-no-provider
  - Step 6: global-qualified fires only when lexically empty + never for
            non-dotted names + not consulted when lexical hit exists
  - Step 7: tie-break cascade (inner shadows outer; defId.localeCompare
            final)
  - Corroborators: unresolved-import 0.5× cap per-signal + dynamic-
            unresolved 0.02 degraded signal
  - §4.5: lookupQualified kind filter + empty on miss + deterministic defId
          order for partial classes
  - §4.7: invariants — confidence per-candidate, capped at 1.0, kind-match
          always present, [0]-for-one-shot

## Known follow-up optimizations

`collectOwnedMembers` in `lookup-core.ts` iterates `defs.byId.values()`
for each MRO hop — O(D) per call. Acceptable for Ring 2 fixtures; a
by-owner index should land before Ring 3 migrates large-workspace
languages. Tracked alongside the existing `findDefById` follow-up from
#915 review.

## Module placement

All under `gitnexus-shared/src/scope-resolution/registries/` — consistent
with the Ring 2 SHARED folder layout (#912/#913/#914/#915/#916/#918).
Slight deviation from the issue's `gitnexus-shared/src/registries/`
suggestion for consistency with siblings.

## Part of

- Parent: #909
- Depends on (code): #910, #911, #912, #913, #914, #915, #916, #918.
- Closes the Ring 2 SHARED delivery band. Unblocks Ring 2 PKG (#919–#925
  bridges to the gitnexus/ CLI package) and Ring 3 language migrations.
2026-04-18 17:58:26 +01:00
Gergő Magyar
a9a5e1c388
feat(shared): SCC-aware finalize algorithm with bounded fixpoint (#915, RFC #909 Ring 2 SHARED) (#962)
* feat(shared): SCC-aware finalize algorithm with bounded fixpoint (#915, RFC #909 Ring 2 SHARED)

Implements RFC §3.2 Phase 2 as pure logic in `gitnexus-shared`. Takes
per-file parse output and returns linked `ImportEdge[]` + materialized
module-scope bindings, fully language-agnostic (target resolution,
wildcard expansion, and binding precedence all go through caller hooks).

Three-phase algorithm:

  1. Tarjan SCC over the file-level import graph (iterative, deterministic
     node order, O(V+E)). Returns SCCs in reverse-topological order so
     leaves finalize before dependents — and so disjoint SCCs are
     explicitly surfaced for parallel-processing callers.

  2. Per-SCC bounded fixpoint. For each SCC in topo order, iterate up to
     `N = |intra-SCC edges|`; each pass tries to resolve every still-
     unlinked edge by looking up the imported name in the target file's
     local defs. Stops early when no progress. Edges still unlinked after
     the cap get `linkStatus: 'unresolved'` — keeps malformed inputs
     bounded and preserves the RFC §4v2 capped-signal contract for
     unresolved markers.

  3. Wildcard expansion + module-scope binding materialization. For each
     `wildcard` ParsedImport that linked to a module, expand via
     `expandsWildcardTo` into one `wildcard-expanded` ImportEdge per
     exported name. Bindings per module scope are the merge of local defs
     (`origin: 'local'`), named / alias / reexport imports
     (`origin: 'import' | 'reexport'`), namespace imports (`origin:
     'namespace'`), and wildcard expansions (`origin: 'wildcard'`), with
     precedence delegated to `provider.mergeBindings`.

Dynamic imports rule: `kind: 'dynamic-unresolved'` passes through as an
ImportEdge with `targetFile: null` and no BindingRef.

Re-export flattening: reexport edges land with `transitiveVia: [targetFile]`.
Multi-hop chains settle iteratively across the fixpoint.

Types:
  - Adds `'wildcard'` variant to ParsedImport (parse-time signal for
    `import * from M`). The finalize-only `'wildcard-expanded'` ImportEdge
    kind is unchanged and remains finalize output only, as documented.
  - Exports `finalize` + `FinalizeFile` / `FinalizeInput` / `FinalizeHooks`
    / `FinalizeOutput` / `FinalizedScc` / `FinalizeStats`.

Simple-name derivation: `deriveSimpleName` uses `def.qualifiedName` as the
authoritative source (tail after the last `.`). Defs without a
qualifiedName are not name-resolvable by this algorithm — an explicit
design choice that trades strictness for predictability (no heuristic
nodeId parsing).

Tests (20, all passing):
  - Trivial: empty workspace · acyclic resolution · unresolvable target
    (file + name) · dynamic-unresolved passthrough.
  - Cycles: A↔B two-file cycle linked · cycles packed into SCC with
    isCycle=true · disjoint cycles produce disjoint SCCs · mixed
    linked/unresolved edges reported correctly in stats.
  - Wildcards: one ImportEdge per exported name · unresolved wildcards
    survive as single edges · expanded bindings carry origin='wildcard'.
  - Reexports: transitiveVia carries the intermediate file path.
  - Aliased + namespace: alias preserves targetExportedName under its
    local name · namespace links to module scope even without a module-def.
  - Bindings: locals land as origin='local' · imports layer on via
    mergeBindings · mergeBindings can drop existing (last-write-wins
    precedence honored).
  - SCC-DAG: reverse-topological ordering verified (leaf first).

Combined scope-resolution / model / shadow suite: 229/229 pass.
`tsc --noEmit` clean in both `gitnexus-shared` and `gitnexus`.

Closes part of #909. Unblocks #917 (Registry.lookup's import-chain fast
path consumes finalized ImportEdges); unblocks Ring 3 language migrations
(per-language providers supply FinalizeHooks implementations).

* chore(shared): address #915 review findings — dead code, docs, tests

Review thread on PR #962.

Code changes:
  - Remove dead `resolvedTargets` map + `keyFor` + `ParsedImportKey`
    type alias. The map was populated but never read; originally intended
    to cache / dedup resolutions for later phases but that path was never
    wired (finding 1.1).
  - Drop unused params (`_edgeIndex`, `_hooks`, `_workspace`) from
    `tryFinalize`. No planned fixpoint-state consultation; no reason to
    keep them reserved (finding 2.1).

Documentation:
  - `FinalizeFile.localDefs` now documents the multi-hop re-export
    contract explicitly: `finalize` looks names up in the target's
    static `localDefs`; if B only re-exports from C and doesn't surface
    the name in its own localDefs, A's import of that name from B will
    hit the cap and be marked unresolved. Parsers that want multi-hop
    chains to settle end-to-end must include re-exported names in the
    intermediate file's localDefs (finding 1.2).
  - `FinalizeStats` now documents its counting granularity: all edge
    counters are per-`ParsedImport`, not per-materialized-`ImportEdge`.
    A wildcard expanding to N exports counts as one linked edge;
    dynamic-unresolved pass-throughs count as linked. The bindings map
    is the authoritative "has a BindingRef" source (finding 3.2).

Tests (2 added, 22 total in finalize-algorithm.test.ts, 231/231 combined):
  - Explicit cap-hit → `linkStatus: 'unresolved'` assertion for a cycle
    where the name-level lookup never succeeds (distinct from
    `targetFile: null`; cap exhaustion path) (finding 3.1).
  - Multi-hop re-export contract test: demonstrates both variants —
    intermediate B WITHOUT X in localDefs → unresolved; B WITH X in
    localDefs → resolved to the original source DefId (finding 1.2).

Not addressed (filed as follow-up issues):
  - LanguageProvider.resolveImportTarget vs FinalizeHooks signature
    divergence (finding 1.3) — pre-Ring-3 concern.
  - findDefById O(F×D) scan in Phase 5 (finding 4.1) — acceptable for
    Ring 2; optimize before large-workspace Ring 3 migrations.
2026-04-18 17:26:07 +01:00
Gergő Magyar
8cf9ae0e0d
feat(shared): ScopeTree + PositionIndex + makeScopeId (#912, RFC #909 Ring 2 SHARED) (#961)
Implements the scope-tree spine and position-indexed lookup as pure logic
in `gitnexus-shared`. Generalizes the `enclosingFunctions` pattern from
closed PR #902 to arbitrary `ScopeKind`s.

Three modules under `gitnexus-shared/src/scope-resolution/`:

1. `scope-id.ts` — `makeScopeId({filePath, range, kind})` builds the
   canonical RFC §2.2 shape
     `scope:{filePath}#{startLine}:{startCol}-{endLine}:{endCol}:{kind}`
   and interns the result through a process-local pool so repeated calls
   with structurally identical inputs return the same string reference.
   `clearScopeIdInternPool()` exported for test isolation.

2. `scope-tree.ts` — `buildScopeTree(scopes)` validates invariants and
   returns an immutable `ScopeTree`:
     - `getScope(id)` / `getParent(id)` / `getChildren(id)` / `getAncestors(id)`
     - Implements the `ScopeLookup` contract from #916, so `resolveTypeRef`
       can consume a `ScopeTree` directly (test included).
   Invariants enforced (throw `ScopeTreeInvariantError` on violation):
     - Non-Module scopes must have a parent.
     - Parent must exist in the supplied set.
     - Parent range STRICTLY contains child range (equal ranges rejected).
     - Sibling ranges under the same parent do not overlap. Ranges that
       merely touch at the boundary (`a.end == b.start`) are accepted.
     - Parent and child live in the same filePath.
     - Duplicate scope ids are rejected.

3. `position-index.ts` — `buildPositionIndex(scopes)` produces a
   `PositionIndex` with `atPosition(filePath, line, col)`. Per-file sorted
   array; binary-search the upper bound of `start ≤ query`, scan backward
   through the prefix, return the first containing hit.
   Complexity: `O(log N_file + D)` typical (D = lexical depth ≤ ~10);
   degrades to `O(N_file)` only under pathological inputs (many scopes
   starting at the same position). "Innermost wins" falls out of the sort
   + backward-scan contract because `ScopeTree`'s invariants guarantee
   that scopes containing a point form an ancestor chain.

Types:
  - `ScopeTree` now exported from `scope-tree.ts`. The Ring 1 opaque
    placeholder in `types.ts` has been removed; LanguageProvider hooks
    that previously took `ScopeTree = unknown` now receive the concrete
    interface (CLI `tsc --noEmit` passes — no existing callers rely on
    the opaque shape).

Tests (39, all passing):
  - scope-id: canonical shape · all six ScopeKinds encoded · identity
    equality (same inputs → same reference) · distinguished by
    filePath / range / kind · purity under repeated calls · intern-pool
    clear preserves canonical shape.
  - scope-tree: empty tree · single module · nested Module→Class→Function
    · multiple siblings input-order preserved · ScopeLookup integration
    with resolveTypeRef · frozen children and ancestor arrays · all six
    invariant violations (non-Module orphan, parent-not-found, parent
    doesn't contain, parent == child, siblings overlap, cross-file parent,
    duplicate id) · boundary-touching siblings accepted.
  - position-index: empty · unindexed filePath · before/after-file
    queries · start/end inclusivity · innermost-wins for nested / co-
    starting / co-ending / same-line scopes · sibling dispatch · multi-
    file isolation · size · id-dedup.

Combined scope-resolution / model / shadow suite: 190/190 pass.
`tsc --noEmit` clean in both `gitnexus-shared` and `gitnexus`.

Closes part of #909. Unblocks #917 (`Registry.lookup` needs the scope
spine); makes `ScopeLookup` in #916 concrete without API churn.
2026-04-18 16:41:38 +01:00
azizur100389
ac148612ab
feat(search): per-phase timing instrumentation for the query pipeline (#953)
* feat(search): per-phase timing instrumentation for the query pipeline

The eval harness already measures search-pipeline latency per phase,
but the *product* query() tool has no timing visibility. That leaves
production latency opaque:

 - Is BM25 the tail, or vector search?
 - How much Promise.all overlap do concurrent searches actually save?
 - Does symbol_lookup dominate when per-symbol Cypher round-trips pile up?

None of this is answerable from the outside, which blocks the
latency-quality Pareto work tracked in #546 / #553.

Changes:

* New PhaseTimer class at src/core/search/phase-timer.ts.
  Supports three APIs:
    - start(phase) / stop() for sequential phases (per issue spec)
    - mark(phase, durationMs) for pre-measured durations
    - time(phase, promise) to wrap a promise inside Promise.all

  The issue's original spec was sequential-only, which doesn't work
  for BM25 + vector inside Promise.all — the second start() would
  auto-stop the first and only one phase would get timed. The mark()
  and time() variants resolve that without changing the sequential
  API for the other phases.

* local-backend.ts query() instrumented across seven phase markers:
    bm25, vector   (concurrent via timer.time inside Promise.all)
    merge          (RRF reciprocal-rank-fusion)
    symbol_lookup  (per-symbol process + cohesion + content Cypher)
    ranking        (in-memory priority sort)
    formatting     (response object construction + dedup)
    wall           (end-to-end; separate mark so callers can compare
                   sum(phases) vs wall and see Promise.all savings)

* logQueryTiming() helper next to logQueryError(), same console-based
  pattern (repo has no structured logger). Emits
    GitNexus [query:timing] query="..." totalMs=N phases={...}
  to stdout — greppable prefix, JSON-parseable payload, no new deps.

* timing: Record<string, number> added as a top-level field on the
  query() response. Strict superset of the previous shape — existing
  tests only assert field presence, so no regression. Other MCP tools
  use the same top-level-metadata convention (status, row_count,
  warning) rather than a nested _meta wrapper.

Tests:

 - 6 new unit tests for PhaseTimer covering start/stop, implicit
   stop-on-start, additive mark(), Promise.all-safe time(),
   negative/NaN rejection, and totalMs auto-stop.
 - 3 new assertions on the existing query integration test verifying
   timing.wall is a non-negative number and at least one of
   bm25/vector fired.

Verification:
  npx vitest run test/unit/phase-timer.test.ts       -> 6 pass
  npx vitest run test/unit/calltool-dispatch.test.ts -> 65 pass
  npx vitest run test/integration/local-backend-calltool.test.ts -> 18 pass
  npm run test:unit                                   -> 3777 pass
    (4 pre-existing env failures unchanged: skip-git-cli needs
     built dist/, git-utils tmpdir on Windows worktree)
  npx tsc --noEmit                                    -> clean

Scope declined for v1:

 - In-process histogram aggregation — the log line is enough for
   external tooling
 - Pareto curve generation — issue asks to enable it, not generate it
 - Sub-phases of symbol_lookup (process vs cohesion vs content) —
   issue lists them under one bucket; can split later if demand surfaces

Closes #553

* fix(search): route query:timing log to stderr to preserve stdio MCP contract

CI (#953) failed the `query: JSON appears on stdout, not stderr`
e2e test in test/integration/cli-e2e.test.ts with:

  SyntaxError: Unexpected token 'G', "GitNexus [..." is not valid JSON

Root cause: my initial logQueryTiming() in 63fbdc4 used console.log,
which writes to stdout. The MCP stdio transport uses stdout
exclusively for JSON-RPC responses (#324), and the CLI e2e test
guards that contract by asserting stdout parses as JSON on every
tool invocation. The "GitNexus [query:timing] ..." line was
interleaving with the response JSON and breaking the parse.

Fix: route logQueryTiming through console.error instead. stderr is
the correct channel for human-readable diagnostics and it is what
the sibling logQueryError already uses for the same reason. The log
line format is otherwise unchanged -- still greppable, still
JSON-parseable payload.

Verification (local, with dist built):
  npx vitest run test/integration/cli-e2e.test.ts -t "query: JSON"
    -> now passes (was failing across ubuntu/windows/macos in CI)
  npx tsc --noEmit                                  -> clean
  Two unrelated pre-existing failures on non-git
  directory handling remain (same on upstream/main).

Closes the CI regression introduced in 63fbdc4.
2026-04-18 16:30:07 +01:00
Gergő Magyar
5d76dbcfa2
feat(shared): MethodDispatchIndex materialized view over HeritageMap (#914, RFC #909 Ring 2 SHARED) (#960)
Implements RFC §3.1 `MethodDispatchIndex`: a two-way materialized view
keyed by `DefId` for O(1) method-dispatch resolution:

  - `mroByOwnerDefId`       — owner class → full MRO ancestor chain
                              (excludes self, per-language strategy order)
  - `implsByInterfaceDefId` — interface/trait → classes that implement it

**Not an MRO implementation.** `buildMethodDispatchIndex` is a pure
aggregator that calls back into caller-provided `computeMro` and
`implementsOf` functions. The five existing strategies (Python C3, Ruby
kind-aware, Java/Kotlin linear, Rust qualified-syntax, COBOL none) stay
where they are today (`model/resolve.ts`, `languages/ruby.ts`); this index
does not reimplement them.

Why callbacks rather than a shared registry: the strategies depend on the
CLI's `HeritageMap` + `SemanticModel`. Migrating both to `gitnexus-shared`
is out of scope for #914; callbacks let the shared build stay pure.

Module placement: `gitnexus-shared/src/scope-resolution/method-dispatch-index.ts`
for consistency with the other RFC §3.1 indexes (#913 DefIndex /
ModuleScopeIndex / QualifiedNameIndex; #916 resolveTypeRef).

Safety surface mirrors sibling indexes:
  - First-write-wins on duplicate owners.
  - Repeated (interface, owner) pairs deduplicated.
  - Stored arrays are `Object.freeze`d; caller mutation of the source
    array does not leak into the index.
  - Miss returns a shared frozen empty array.

Tests (19, all passing): empty input, single-inheritance chain, Python
C3 diamond, Java BFS, Ruby kind-aware mixin, Rust qualified-syntax empty,
interface inversion (single, multiple, ordered), dedup within and across
callback calls, frozen miss + bucket arrays, callback-array isolation,
readonly Map iteration.

Closes part of #909.
2026-04-18 16:28:46 +01:00
Gergő Magyar
56e32b310b
feat(shared): resolveTypeRef strict single-return type resolver (#916, RFC #909 Ring 2 SHARED) (#959)
Implements RFC §4.6: a strict, pure resolver for `TypeRef`s used by
`Registry.lookup` Step 2 (type-binding propagation) and by any caller that
wants the single best type-target for an annotation without paying for the
full evidence pipeline.

Algorithm (strict):

  1. Walk the scope chain from `ref.declaredAtScope`:
     - Return the first binding for `rawName` whose origin is in
       `{'local','import','namespace','reexport'}` AND whose `def.type` is a
       type-kind (class-like, interface-like, enum-like, alias-like).
     - If bindings exist but none qualify (non-type shadow, wildcard-only
       origin), return null immediately — do NOT fall through to the global
       qualified-name index.
  2. If `rawName` is dotted and the scope walk produced no match, consult
     `QualifiedNameIndex.byQualifiedName`. Only accept a UNIQUE type-kind
     hit; ambiguous or non-type results return null.

`'wildcard'` is deliberately excluded from strict origins — a
wildcard-expanded name is too loose to anchor type resolution.

Module placement: `gitnexus-shared/src/scope-resolution/resolve-type-ref.ts`
(alongside sibling indexes) rather than the issue's suggested
`gitnexus-shared/src/resolve-type-ref.ts`, for consistency with the rest of
the RFC §2/§3 surface.

A minimal `ScopeLookup` interface is declared inline so #916 ships
standalone; #912's `ScopeTree` will satisfy this contract without change.

Closes part of #909.
2026-04-18 16:09:54 +01:00
Gergő Magyar
ac2012e5ed
feat(shared): DefIndex / ModuleScopeIndex / QualifiedNameIndex (#913, RFC #909 Ring 2 SHARED) (#958)
Three flat O(1) indexes + pure build functions over per-file artifacts.
Contract-only; no runtime behavior change yet — consumers (#917 Registry
lookups, #915 SCC finalize, #919 ScopeExtractor) wire in later.

Each index follows the same shape:
  - build function: flat input list → frozen immutable index
  - public interface: readonly Map + get/has/size accessors
  - first-write-wins on id/filePath collisions (upstream bug signal)
  - pure, side-effect-free, safe to call repeatedly

DefIndex — the global "what is this id?" lookup
  gitnexus-shared/src/scope-resolution/def-index.ts
  buildDefIndex(defs: readonly SymbolDefinition[]): DefIndex
    byId: ReadonlyMap<DefId, SymbolDefinition>
  Consumed by Registry.lookup (#917) to materialize DefId[] hits back to
  full SymbolDefinition records.

ModuleScopeIndex — `filePath → moduleScopeId` for cross-file hops
  gitnexus-shared/src/scope-resolution/module-scope-index.ts
  buildModuleScopeIndex(entries): ModuleScopeIndex
    byFilePath: ReadonlyMap<string, ScopeId>
  Consumed by the SCC finalize link pass (#915) to resolve
  ImportEdge.targetFile to a concrete module scope in constant time.

QualifiedNameIndex — cross-kind qualified-name fast path
  gitnexus-shared/src/scope-resolution/qualified-name-index.ts
  buildQualifiedNameIndex(defs: readonly SymbolDefinition[]): QualifiedNameIndex
    byQualifiedName: ReadonlyMap<string, readonly DefId[]>
  Returns DefId[] (not a single DefId) because partial classes, method
  overloads, and cross-kind collisions can legitimately share a
  qualifiedName. Callers filter by acceptedKinds at the lookup site.
  Consumed by Registry.lookup qualified fast path + resolveTypeRef
  dotted fallback (#916, #917).

Barrel re-exports added to gitnexus-shared/src/index.ts so consumers
import from 'gitnexus-shared' rather than deep paths.

Tests (gitnexus/test/unit/scope-resolution/, 23 total):
  def-index.test.ts (6):
    empty, single def, multiple distinct, first-write-wins collision,
    missing id returns undefined, byId direct iteration
  module-scope-index.test.ts (6):
    empty, single entry, multiple files, first-write-wins on duplicate
    filePath, missing returns undefined, byFilePath direct iteration
  qualified-name-index.test.ts (11):
    empty, single qnamed def, partial classes accumulate, input-order
    preservation, qname separation, skip undefined/empty qname, pair
    dedup, cross-kind indexing, frozen-empty-array on miss, direct
    iteration

Verification:
  - gitnexus-shared + gitnexus build clean (tsc + scripts/build.js)
  - test/unit/scope-resolution: 23/23 pass
  - model + shadow + scope-resolution combined: 129/129 pass
  - No runtime consumer wiring yet — indexes are standalone library
    functions that #915, #917, #919 will import when ready

Depends on #910 (SymbolDefinition, DefId, ScopeId types — already on main).
Unblocks #915 (finalize algorithm), #917 (Registry.lookup), #919
(ScopeExtractor materialization).
2026-04-18 15:59:34 +01:00
Copilot
f73389eac3
fix: ENOBUFS in detect_changes by setting maxBuffer on git/rg execFileSync (#957)
* Initial plan

* Fix ENOBUFS in detect_changes by setting maxBuffer on git/rg execFileSync

Agent-Logs-Url: https://github.com/abhigyanpatwari/GitNexus/sessions/bb241ed0-3b39-431f-a242-b0c7ced9707b

Co-authored-by: magyargergo <11230420+magyargergo@users.noreply.github.com>

---------

Co-authored-by: copilot-swe-agent[bot] <198982749+Copilot@users.noreply.github.com>
Co-authored-by: magyargergo <11230420+magyargergo@users.noreply.github.com>
2026-04-18 15:58:31 +01:00
Gergő Magyar
22f0beb057
feat(shared): shadow-mode diff + aggregate — full implementation (#918, RFC #909 Ring 2 SHARED) (#951)
Replaces the scaffold stubs with working pure-logic implementations plus
unit-test coverage for both functions. Unblocks Ring 2 PKG #923 (shadow
harness) to consume a concrete library instead of throwing scaffolds.

gitnexus-shared/src/scope-resolution/shadow/diff.ts
  `diffResolutions(callsite, legacy, newResult): ShadowDiff`
    - [0] on each side is the top match
    - both empty         → 'both-empty',   delta []
    - legacy empty only  → 'only-new',     delta = new top evidence
    - new empty only     → 'only-legacy',  delta = legacy top evidence
    - same top nodeId    → 'both-agree',   delta []
    - different nodeIds  → 'both-disagree',
                           delta = symmetric difference of evidence kinds
                           (legacy-only first in input order, then new-only)
  Evidence identity is `ResolutionEvidence.kind` — weight/note differences
  for the same kind do NOT produce delta entries. Rationale: the aggregator
  wants to know which *signals* explain a disagreement, not fluctuations
  in calibration values.

gitnexus-shared/src/scope-resolution/shadow/aggregate.ts
  `aggregateDiffs(diffs, now?): ShadowParityReport`
    - buckets by `SupportedLanguages`
    - tallies agreements, evidence-breakdown (divergences only — agree and
      empty rows do not contribute)
    - parity = bothAgree / (totalCalls - bothEmpty), yields 0 (not NaN)
      when the denominator is 0
    - perLanguage sorted alphabetically by enum value for stable output
    - evidenceBreakdown internally sorted by kind for stable output
    - overall = column-wise sum across languages
    - `now` parameter makes generatedAt deterministic in tests

gitnexus-shared/src/index.ts
  Re-exports the full shadow API: diffResolutions, aggregateDiffs, and all
  their types (ShadowAgreement, ShadowCallsite, ShadowDiff,
  LanguageParityRow, ShadowParityReport).

gitnexus/test/unit/shadow/diff.test.ts (13 tests)
  - 5 agreement outcomes
  - symmetric-by-kind evidence delta (disjoint, overlapping, fully-overlapping)
  - weight-only differences produce no delta
  - top-match only (ignores indices beyond [0])
  - callsite passthrough
  - delta ordering (legacy-only first, input order preserved)

gitnexus/test/unit/shadow/aggregate.test.ts (9 tests)
  - empty input
  - single language, all agree / mixed / all empty
  - multi-language bucketing + overall sum
  - alphabetical language sort
  - evidence breakdown scope
  - determinism via injected `now` + JSON round-trip identity

Verification:
  - gitnexus-shared + gitnexus build clean (tsc + scripts/build.js)
  - test/unit/shadow: 22/22 pass
  - test/unit/model + test/unit/shadow combined: 106/106 pass
  - No runtime behavior changes (shadow is invoked by #923, not yet wired)

Stacked on main (af1d278a). Depends on types from #910 (merged).
Unblocks: #923 (Ring 2 PKG — shadow harness wiring) — concrete library
to consume instead of scaffold stubs.

Plan: docs/plans/2026-04-18-001-refactor-911-senior-hooks-redesign-plan.md
is about #911; #918's scope is the scaffold+fill-in described in the PR
description of #951.
2026-04-18 15:32:51 +01:00
Gergő Magyar
afc0a8b6c5
feat(shared): add scope-resolution types + constants (#910, RFC #909 Ring 1) (#949)
Lands the authoritative data model and constants for the pure scope-based
resolution RFC (#909) as Ring 1, part 1. No runtime behavior changes —
types + constants only.

New in gitnexus-shared/src/scope-resolution/:
  - types.ts — Scope, ScopeKind, ScopeId, DefId, Range, Capture,
    BindingRef, ImportEdge, TypeRef, Resolution, ResolutionEvidence,
    Reference, ReferenceIndex, LookupParams, RegistryContributor
  - evidence-weights.ts — EvidenceWeights constant map + typeBindingWeightAtDepth
    (RFC Appendix A)
  - origin-priority.ts — ORIGIN_PRIORITY constant map for deterministic
    tie-breaks (RFC Appendix B)
  - language-classification.ts — LanguageClassification type +
    LanguageClassifications map (production × 14, experimental × 2
    for vue/cobol; governs Ring 4 DAG-retirement gate)
  - symbol-definition.ts — SymbolDefinition moved from
    gitnexus/src/core/ingestion/model/symbol-table.ts so scope-resolution
    types can reference it from the shared package

Consumer updates:
  - symbol-table.ts: removes local SymbolDefinition declaration; imports
    from gitnexus-shared
  - model/index.ts: drops SymbolDefinition from barrel re-export per
    "direct imports from gitnexus-shared" convention (see
    gitnexus-shared feedback in project memory)
  - 9 source files + 5 test files: import SymbolDefinition directly
    from 'gitnexus-shared'

Verification:
  - gitnexus-shared builds clean (tsc)
  - gitnexus builds clean (scripts/build.js)
  - 131/132 unit test files pass; 3767 tests green
  - Zero behavior changes; SymbolDefinition shape unchanged

Blocks: #911 (LanguageProvider hook interface extensions) and all of
Ring 2 (#912-#925). Closes part of #909.
2026-04-18 12:55:09 +01:00
Gergő Magyar
d9da7d6692
fix(test): isolate cli-e2e from shared mini-repo fixture (#954)
Deterministic fix for the Windows-flaky pipeline-graph-golden test.

Root cause
  cli-e2e.test.ts wrote into the SHARED fixture directory
  (test/fixtures/mini-repo/) — git init, analyze run that creates
  AGENTS.md, CLAUDE.md, .claude/, .gitnexus/. When pipeline-graph-golden
  ran in parallel, its `cpSync` of the source directory could capture
  the mid-flight pollution before cli-e2e's afterAll cleanup fired.
  macOS/Ubuntu won the race often enough that the flake presented as
  Windows-only.

Fix
  cli-e2e now copies mini-repo into a fresh `mkdtemp`'d parent whose
  basename is `mini-repo` (preserving `--repo mini-repo` CLI lookup by
  basename), runs git-init there, and rm's the whole tmpdir in afterAll.
  The shared fixture source is never touched.

  Fallout from the cwd change: bare `--import tsx` specifiers (2
  spawnSync + 1 spawn) can't resolve `tsx` from an os.tmpdir cwd where
  there is no node_modules. Switched them to the already-existing
  `tsxImportUrl` (absolute file:// URL to the tsx loader), matching
  the `runCliOutsideProject` pattern that was already set up for this
  exact case.

  Updated the "MINI_REPO is inside the project tree" comment in the
  `status on non-indexed repo` test — MINI_REPO is now in os.tmpdir,
  so the rationale for using a separate throwaway tmp git repo is
  different (but still valid: previous tests in the suite create
  MINI_REPO/.gitnexus, which findRepo() would pick up).

  Also updated pipeline-graph-golden's comment explaining WHY it
  copies to tmp — it's now defense-in-depth rather than a necessity,
  so a future test that adds files to the source can't silently
  regress the golden.

Verification
  - 5x consecutive `cli-e2e + pipeline-graph-golden` runs: 20/20 pass
    (deterministic)
  - 3x full suite including pipeline.test: 27/27 pass
  - test/fixtures/mini-repo/ post-run contents: only `src/` —
    zero pollution from any test
  - macOS/Ubuntu behavior unchanged (they were passing; tmpdir
    isolation is purely additive)
2026-04-18 12:54:59 +01:00
azizur100389
131d411ae4
feat(mcp): rank context/impact disambiguation candidates and expose kind/file_path hints (#888)
* feat(mcp): rank context/impact disambiguation candidates and expose kind/file_path hints

The `context` MCP tool already returned `{ status: 'ambiguous', candidates }`
when a name hit multiple symbols, but the candidates were returned in
arbitrary DB order and the only hint it accepted was file_path. The
`impact` tool was worse: when its name resolver found multiple viable
matches it silently picked the first one from a priority UNION, with no
signal back to the caller that a different symbol might have been
intended.

Both failure modes were flagged in issue #470 and reconfirmed in the
comments by a second user who described impact as returning "incorrect
parsing results and meaningless tool calls" in the multi-match case.

Changes:

* Add `resolveSymbolCandidates(repo, query, hints)` private helper on
  LocalBackend. Single place that:
   - Short-circuits on direct uid (zero-ambiguity)
   - Runs the same name-or-qualified-id match as before, with LIMIT 20
     (was 10) so the ranker has headroom instead of arbitrary truncation
   - Preserves the #480 Class/Constructor preference -- when the only
     ambiguity is a Class and its own Constructor, the Class wins
     silently
   - Scores each candidate (pure TS, no extra DB round-trip): base 0.50,
     +0.40 for file_path match, +0.20 for kind match, plus a small
     kind-priority tiebreaker (Class > Interface > Function > Method >
     Constructor) when no explicit kind hint is given
   - Sorts desc by score with stable tiebreakers (shorter filePath,
     then lex uid)
   - Promotes to a single confident resolve when the top score is
     >= 0.95 AND beats the runner-up by >= 0.10 -- lets a strong hint
     cut through without forcing the caller through a disambiguation
     round-trip

* Rewire `context()` to use the shared helper. Response shape is a
  strict superset of today's: candidates gain a `score` field, the
  existing `{ uid, name, kind, filePath, line }` keys are preserved so
  every downstream consumer (rename, eval-server formatter, etc.) keeps
  working. New `kind` input hint accepted.

* Rewire `impact()` to use the shared helper. Now emits the same
  `{ status: 'ambiguous', candidates, impactedCount: 0, risk: 'UNKNOWN' }`
  shape instead of silent first-pick. New inputs accepted:
  `target_uid`, `file_path`, `kind`.

* Update tool schemas in mcp/tools.ts to advertise the new inputs and
  describe ranked disambiguation.

Backward compatibility:

The #480 Class/Constructor collapse is preserved and covered by the
existing java-class-impact integration test (still green). The
ambiguous response shape is a strict superset -- `eval-formatters`
unit test that parses the old shape is unchanged and still passes.
`impact` going from silent-first-pick to structured ambiguous is a
semantic improvement that is the entire point of the issue; callers
relying on silent first-pick now get an actionable response.

Scope declined for v1:

module/community hint -- the issue lists it as one of several hints,
but kind + file_path cover the vast majority of disambiguation needs
in practice, and a community-label filter requires an extra graph
query per candidate. Natural v2 follow-up.

Tests: calltool-dispatch.test.ts gains 5 new cases covering file_path
boost, kind hint boost, impact ambiguous shape, impact target_uid
short-circuit, and score field presence on the existing ambiguous
test. Plus the extended assertions on the existing
`context tool returns disambiguation for multiple matches`.

Verification:
  npx vitest run test/unit/calltool-dispatch.test.ts       -> 64 pass
  npx vitest run test/integration/java-class-impact.test.ts -> pass
  npm run test:unit                                         -> 3642 pass
    (4 pre-existing env failures unchanged: skip-git-cli needs built
    dist/, git-utils tmpdir on Windows worktree -- same on main)
  npx tsc --noEmit                                          -> clean

Closes #470

* fix(mcp): enrich labels from UNION when labels(n)[0] is empty; address review findings

CI on PR #888 caught 13 integration-test failures I did not cover locally:
my resolver refactor collected candidates via `labels(n)[0] AS type`, but
LadybugDB returns an empty string for that projection on certain node
types (most importantly Class). With an empty `type`, impact's downstream
`_runImpactBFS` no longer recognised `symType === 'Class' | 'Interface'`
and stopped seeding Constructor + File nodes into the frontier, so the
"impact(upstream) surfaces the file importer" assertion broke across 11
language fixtures plus 2 OVERRIDES filter tests.

The original impact resolver worked around this by running a prioritised
UNION across Class/Interface/Function/Method/Constructor and picking the
first hit. My refactor dropped that. Fix: keep the simple candidate MATCH
but enrich types afterward via a single scoped UNION query, so every
candidate carries an accurate label for both scoring and downstream
BFS seeding. The UID direct-lookup path is patched the same way.

Also addresses the findings from the senior reviewer on PR #888:

* MIGRATION.md: document the `impact` behavioural change (silent first-
  pick → structured `{ status: 'ambiguous', candidates }`) so downstream
  callers know to branch on `result.status` before reading byDepth/
  summary. `context` is unchanged shape-wise (strict superset).

* New test: `context tool promotes top candidate via scoring when
  multiple rows survive DB pre-filter`. The review flagged that the
  existing file_path test works only because the mock ignores WHERE
  parameters -- the scored-promotion path (top ≥ 0.95 AND gap > 0.09)
  wasn't directly exercised. The new test uses two candidates both in
  App.tsx-containing paths plus a kind hint so promotion is decided by
  scoring, not DB pre-filtering. Also tightened the comment on the
  earlier file_path test to describe the mock vs production divergence
  honestly.

* NIT: added a paragraph explaining why `scored.length >= 2` is kept as
  a defensive guard even though the `normalized.length === 1` early
  return already covers the single-candidate path.

* Integration: two tests in `local-backend-calltool.test.ts` targeted
  `'authenticate'`, which now correctly resolves as ambiguous (two
  Method nodes: AuthService.authenticate and BaseService.authenticate).
  Updated both to pass `file_path: 'src/auth.ts'` so they exercise the
  new disambiguation API and still assert the METHOD_OVERRIDES filtering
  they were originally about.

Edge case fix in the promotion gap check: IEEE754 makes 0.50 + 0.40 +
0.20 - 0.90 = 0.09999999999999998 instead of exactly 0.10, which would
otherwise break the "winner clearly dominates" intent for legitimate
1.00 vs 0.90 cases. Changed `>= 0.10` to `> 0.09`; same user-facing
intent, no floating-point sensitivity.

Verification (all from gitnexus/):
  npx vitest run test/integration/class-impact-all-languages.test.ts
    -> 52 pass (was 11 FAIL on CI before this fix)
  npx vitest run test/integration/local-backend-calltool.test.ts
    -> 18 pass (was 2 FAIL on CI before this fix)
  npx vitest run test/integration/java-class-impact.test.ts
    -> 10 pass (regression guard for #480 preserved)
  npx vitest run test/unit/calltool-dispatch.test.ts
    -> 65 pass (1 new test + 4 from original #470 PR)
  npm run test:unit
    -> 3626 pass, 4 pre-existing env failures unchanged
  npx tsc --noEmit
    -> clean
2026-04-18 12:52:42 +01:00
azizur100389
925460ab5b
refactor(cli): trim duplicated ai-context CLAUDE.md block (#904) 2026-04-18 07:10:44 +01:00
Copilot
dfa449ef41
feat(ingestion): language-agnostic heritage extractor with config+factory pattern (#890) 2026-04-17 17:51:17 +01:00
Yacine Hmito
daca8360bf
fix(python): avoid local matches for external dotted imports (#899) 2026-04-17 11:35:59 +01:00
Ryanba
77a13113ea
fix: keep worker warnings non-terminal (#261) 2026-04-17 06:46:31 +01:00
evolution
02739085d2
feat(embeddings): AST-aware chunking with offset-based splitting (#889)
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2026-04-16 22:55:04 +01:00