Commit graph

645 commits

Author SHA1 Message Date
Gergo Magyar
c836801c4a feat(mcp): add deterministic response budgets (#2460)
Composed with the read-only and repository policies in the CallTool
handler: read-only assert, then budget resolution, then scoped dispatch
with the transport arg stripped.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
2026-07-16 08:59:05 +00:00
Gergo Magyar
f49ca472fa feat(mcp): normalize impact and context parameter aliases (#2462) 2026-07-16 08:55:49 +00:00
Gergo Magyar
490e74a901 fix(scope): stabilize graph lookup collisions (#2480) 2026-07-16 08:55:23 +00:00
Gergo Magyar
b685ba4cc8 test(communities): rebaseline pipeline-pdg goldens for projection order
The C#, Java and Go flag-off digests shift with the canonical community
projection from #2478 stacked on the walker sort from #2482. Regenerated
via vitest -u; mini-repo pipeline golden was already correct.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
2026-07-16 08:55:09 +00:00
Gergo Magyar
193db519a5 fix(communities): canonicalize projection order (#2478) 2026-07-16 08:50:51 +00:00
Gergo Magyar
48a145a47f feat(mcp): enforce repository allowlist and default (#2465)
Merged with the read-only policy: both filters compose in server.ts.
Review hardening: assertResourceUri compares the opaque host case
insensitively (GITNEXUS://GROUP bypass) and gains the fail-closed
fallback for unparseable URIs; the backend proxy now also intercepts
queryClusters/queryProcesses/queryClusterDetail/queryProcessDetail;
scrubGroupDescription is shared from read-only-policy.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
2026-07-16 08:50:07 +00:00
Gergo Magyar
aa0d6ee0a3 fix(mcp): reject group-only args at read-only dispatch
crossDepth and subgroup are inert outside @group routing, but rejecting
them keeps the scrubbed schema and the dispatch contract in agreement.
Also documents that resource content scrubbing is cosmetic.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
2026-07-16 08:43:30 +00:00
Gergo Magyar
a7775de993 feat(mcp): add fail-closed read-only mode (#2464) 2026-07-16 08:42:32 +00:00
Gergo Magyar
6b013e7d30 fix(scan): lock in Rust publish order and guard PHP suffix roots
Adds the missing #2481 Rust regression test (importer before definer),
fails closed when a PHP namespace suffix matches directories under
different roots, and points the baselines note at #2481/#2482.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
2026-07-16 08:42:07 +00:00
Gergo Magyar
b53429e901 fix(scan): canonicalize traversal without order-sensitive bindings (#2482) 2026-07-16 08:31:46 +00:00
Gergo Magyar
d1a4889550 feat(eval): require bearer auth for remote binding (#2458)
Non-loopback eval-server binds now require GITNEXUS_AUTH_TOKEN with an
exact Bearer header compared in constant time. Review fixes: loopback
binds defer unreadable env file errors to a warning, and help text
notes IPv4 hostname resolution.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
2026-07-16 08:28:30 +00:00
Gergo Magyar
277dfbbec7 fix(eval): defer env file read errors to binds that need a token
Loopback binds now warn and start when .env or .env.local exists but
cannot be read; non-loopback binds keep the fail-closed error. Help
text notes that hostnames resolve to IPv4.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
2026-07-16 08:25:52 +00:00
Copilot
6496c55564
fix(mcp): context resource reads stale lastCommit/stats after out-of-process analyze (#2438) (#2439)
* Initial plan

* fix(mcp): read fresh metadata from disk in context resource to fix stale staleness banner and stats (#2438)

The context resource (gitnexus://repo/{name}/context) was serving stale
lastCommit and stats after an out-of-process `analyze --index-only` refresh.
The LocalBackend's in-memory RepoHandle is cached and only refreshes on
registry misses — never on a disk update from an external process.

Fix: read fresh metadata via loadMeta(repo.storagePath) on every context
resource read, mirroring the ensureInitialized hot-swap pattern. Use the
fresh lastCommit for the staleness check and fresh stats for the stats
block; fall back to cached values when the disk read fails.

Tests:
- 5 new unit tests in resources.test.ts covering fresh meta, fallback behavior
- 3 new integration tests in context-resource-staleness.test.ts covering
  the exact reproduce sequence from the issue report

* fix(test): use @ladybugdb/core mock to prevent native addon load in integration test

The context-resource-staleness integration test used importOriginal() in
the vi.mock factories for pool-adapter.js and mcp/core/lbug-adapter.js.
That caused the real pool-adapter.ts to load @ladybugdb/core, which
tries to dlopen lbugjs.node — a native addon that requires postinstall
(not run with --ignore-scripts in CI).

Fix:
- Add a vi.mock('@ladybugdb/core') at the package boundary, matching the
  pattern in lbug-pool-fts-load.test.ts and pool-wal-recovery.test.ts.
- Replace the two importOriginal()-based lbug mocks with direct factories
  that provide all necessary exports (initLbug, executeQuery,
  executeParameterized, closeLbug, isLbugReady) without loading the real
  module.

All 3 integration tests now pass in CI (no lbugjs.node required).

* test(integration): run context staleness flow end-to-end without mocks

* Address PR review feedback (#2439)

- Restore libc selectors for optional native packages

---------

Co-authored-by: copilot-swe-agent[bot] <198982749+Copilot@users.noreply.github.com>
Co-authored-by: Gergő Magyar <gergomagyar@icloud.com>
2026-07-16 09:20:18 +01:00
Eva
b37dcef771 test(communities): rebaseline canonical projection 2026-07-16 10:19:12 +07:00
Eva
d4576630eb fix(mcp): ignore undefined alias inputs 2026-07-16 10:07:06 +07:00
Eva
846b545680 fix(php): index import declaration directories 2026-07-16 09:58:33 +07:00
Eva
711a13c077 Merge remote-tracking branch 'upstream/main' into review/pr-2482 2026-07-16 09:54:37 +07:00
Eva
ff385a5472 Merge remote-tracking branch 'upstream/main' into upstream/community-order-2477 2026-07-16 09:51:57 +07:00
Eva
575dc6810a fix(mcp): validate repository policy before embedded serving 2026-07-16 09:39:06 +07:00
Eva
e0a83f098a Merge remote-tracking branch 'upstream/main' into upstream/mcp-repository-policy 2026-07-16 09:36:31 +07:00
Eva
d4eb7560ac fix(mcp): close read-only resource routing bypass 2026-07-16 09:34:34 +07:00
Eva
f94826157a Merge remote-tracking branch 'upstream/main' into upstream/mcp-read-only-policy 2026-07-16 09:30:59 +07:00
Eva
3f3494fd32 fix(mcp): validate aliases without schema combinators 2026-07-16 09:29:47 +07:00
Eva
14375ebf29 Merge remote-tracking branch 'upstream/main' into upstream/mcp-parameter-aliases 2026-07-16 09:27:32 +07:00
Eva
0506f91eb9 docs(mcp): explain response budget guardrails 2026-07-16 09:26:19 +07:00
Eva
730edb5c2c Merge remote-tracking branch 'upstream/main' into upstream/mcp-output-budget 2026-07-16 09:23:52 +07:00
Eva
1f7036dbb0 fix(ingestion): canonicalize parse node insertion 2026-07-16 09:21:38 +07:00
Eva
ed3f58d292 Merge remote-tracking branch 'upstream/main' into review/pr-2480 2026-07-16 09:17:40 +07:00
Eva
c9fdab17f2 fix(eval): address auth configuration feedback 2026-07-16 09:13:34 +07:00
Eva
8682c8a56e Merge remote-tracking branch 'upstream/main' into upstream/eval-server-auth 2026-07-16 09:06:59 +07:00
Gergő Magyar
a05b501102
fix(cli): make Claude skills discoverable (#2434)
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2026-07-15 20:40:20 +05:00
Eva
34955b57f6 fix(php): resolve symbol-named PSR-4 imports 2026-07-14 13:12:33 +07:00
Eva
5407747c67 fix(php): resolve function imports by declaring file 2026-07-14 12:46:59 +07:00
Eva
f0f316a7b2 fix(scan): canonicalize traversal without order-sensitive Rust binding 2026-07-14 12:21:40 +07:00
Eva
031a160090 fix(scope): stabilize graph lookup collisions 2026-07-14 04:02:22 +07:00
Eva
26d9bfe888 fix(communities): canonicalize projection order 2026-07-14 03:21:34 +07:00
Eva
181faa858c feat(mcp): enforce repository allowlist 2026-07-14 02:01:00 +07:00
Eva
17b32c5be2 feat(mcp): add fail-closed read-only mode 2026-07-14 01:58:27 +07:00
Eva
a75844b692 feat(mcp): normalize impact and context aliases 2026-07-14 01:54:49 +07:00
Eva
627ec5a5aa feat(mcp): add deterministic output budgets 2026-07-14 01:48:17 +07:00
Eva
5b65f610a9 feat(eval): require bearer auth for remote binding 2026-07-14 01:45:28 +07:00
Gergő Magyar
c6445096eb
fix: stop Napi::Error SIGABRT on analyze — index C++ type lookups, terminate workers only at JS-safe points (#2432) (#2436)
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2026-07-11 18:07:08 +01:00
Parafee41
737a8cdb18
fix(web): use repo path identity in switcher (#2420)
* fix(web): use repo path identity in switcher

* keep repo URL project names stable

* fix server repo path resolution

* fix repo path miss resolution

* fix(server): guard clone-dir deletion with path ownership check

Deleting a registry entry derived its clone dir from the entry NAME with
no ownership check, so deleting a local repo that shares a display name
with a server-cloned sibling wiped the sibling's checkout. Gate the
removal on cloneDirBelongsToEntry (canonicalized path equality), the
same entry.path-driven rule the handler's step 2b already mandates.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* fix(server): fail closed on relative repo params and rate-limit GET /api/repo

Relative separator-containing ?repo= values (org/name, ./repo) were
canonicalized against the server CWD — an attacker-influenced
realpathSync probe on an un-rate-limited GET — before failing anyway.
Reject them immediately without touching the filesystem, drop the
redundant path.sep clause, document the resolver's two-tier contract,
and wire createRouteLimiter on GET /api/repo like its DELETE sibling.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* test(server): lock repo resolver branches and register for Windows CI

Lock in the resolver's remaining branches: first-wins for ambiguous
bare names, Windows-shaped input as a fail-closed path claim, the
repos[0] default, and the case-insensitive name fallback. Register the
suite in cross-platform-tests.ts so windows-latest actually runs the
path-shape logic it exists to protect.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* refactor(web): single repoIdentity helper with repoPath normalized end-to-end

The identity fallback chain was copy-pasted in Header and RepoLanding
while backend-client already owns BackendRepo and the repoPath
normalization. Export one repoIdentity helper, normalize fetchRepos
like fetchRepoInfo, and emit repoPath from GET /api/repos so the
scheme no longer silently relies on /api/repo.repoPath equalling
/api/repos.path.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* fix(web): persist and restore repo path identity in the URL

The URL persisted only ?project=<display name>, so refreshing after
switching to a duplicate-name repo silently restored the first
same-named sibling. Persist ?repo=<server-resolved path> alongside the
readable ?project= at both write sites, prefer it on restore (legacy
project-only URLs still work), keep failed path restores fail-visible
(no name fallback), and strip stale identity params when deleting the
active or last repo.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* fix(web): analyze completion connects by path identity

RepoAnalyzer's completion callback passed the display name, so
analyzing a repo whose basename collides with an existing one
reconnected the first same-named sibling. The SSE terminal payload now
carries the job's repoPath (both emit sites), the analyzer passes that
identity to onComplete while the done screen keeps showing the display
name, and old servers without repoPath degrade to today's behavior.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* fix(web): scope code-reference file reads to the active repo identity

The code viewer passed the display name as the repo scope, so with
duplicate-name repos it rendered the wrong repo's file contents under
the right filename. Pass the active path identity (currentRepo) with
the display name as fallback, and collapse the two dead repo fields
that were already shadowed by the readFile spread.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* fix(web): show display names instead of absolute paths in labels

The path-identity switch leaked raw filesystem paths into three
user-facing surfaces: the re-analyze progress label, the repo-switch
overlay, and the agent prompt's project name via loadGraphAnyway.
Resolve display names at render time (registry lookup, then basename
fallback) while state keeps holding the identity; loadGraphAnyway
passes the name explicitly because initializeAgent's empty-deps
closure would otherwise fall through to the literal 'project'.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* fix(web): stop initializeAgent from clobbering repo identity with display names

initializeAgent fell back to writing overrideProjectName (a display
name) into the repo identity, so any future name-only caller — the
pre-PR idiom — would silently kill the Active badge and re-admit the
duplicate-name ambiguity through the agent path. Only opts.repo may
write the identity now.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* chore(web): drop dead initializers flagged by CodeQL

pNameStr's and repoIdentity's initial values were never read: both are
assigned on the success path before any use and the catch returns
early. Bare declarations resolve CodeQL alerts 825/826.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* style(web): fix tailwind class order per root prettier plugin

The worktree pre-commit hook resolved prettier-plugin-tailwindcss
through symlinked node_modules and sorted scrollbar-thin differently
than CI's clean-room install. Re-formatted with the root lockfile
environment; no behavior change.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* test(web): e2e coverage for every #2419 duplicate-name ambiguity

Provision two live repos with the same basename under different parents
via POST /api/analyze, then drive a real browser through each item of
the issue's "Actual behavior" list:

- duplicate rows render and the ACTIVE one is identifiable before and
  after switching (active-state must not compare repo.name)
- switching between duplicates swaps the loaded graph, verified by
  per-repo marker files (onSwitchRepo must not receive repo.name)
- re-analyze targets the clicked duplicate's exact path (POST body),
  tracks progress on that row only, and the completion reconnect
  requests that same path — never the same-named sibling
- delete requests target exactly the chosen duplicate's path; the
  sibling stays registered and loaded
- backend ?repo= resolution is path-first: landing selection loads the
  exact repo, ?repo= survives F5, and a stale path fails closed to the
  repo picker instead of retargeting the sibling

Adds four data-testids to Header (switcher trigger/row/reanalyze/
delete, rows expose data-active) so the spec has stable selectors, and
broadens the post-analyze reconnect retry in App to any BackendError:
the server may still be reinitializing when the SSE complete event
fires, and that surfaces as transient 5xx/binder errors, not only 404.

The re-analyze and delete tests deliberately assert identity at the
request level and tolerate two pre-existing server races that are
unrelated to the #2419 identity contract (freshly-analyzed DB briefly
unreadable after SSE complete; registry validate-prune clobbering a
concurrent unregister) — see the in-test comments.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* chore(autofix): apply prettier + eslint fixes via /autofix command

* test(web): isolate repo-path-identity e2e onto a spec-owned backend

The spec is the only e2e file doing write operations (analyze,
re-analyze, delete). Running its force re-analysis against the shared
CI backend while parallel workers held connections took the whole
server down (run 29145679019: the jobId poll died with ECONNRESET and
every later test in every file failed to connect).

Spawn a dedicated `gitnexus serve` on port 4799 with an isolated
GITNEXUS_HOME in beforeAll instead: writes can no longer perturb the
other suites, a crash is contained to this spec (its output is captured
and printed, which CI otherwise loses), and the registry is hermetic by
construction — the previous leftover-purge and shared-registry cleanup
are gone. Every page is pointed at the spec backend through
useBackend's supported localStorage override, which covers both the
probe-driven landing flow and the ?server= auto-connect. Verified
self-sufficient (6/6 with no shared server running) and non-interfering
(full suite 39/39 with the shared server up).

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* stabilize repo path identity e2e

* fix(server): don't report analyze complete before the index is settled

The analyze worker reports `complete` over IPC before its on-disk
finalization (LadybugDB checkpoint, native handle release, metadata
write) is visible at the storage path — observed up to ~6.5s behind the
IPC message. The launcher's "reinitialize backend BEFORE marking
complete" ordering was meant to make the repo queryable by the time the
client sees the SSE complete event, but it never verified that: clients
reconnecting on that event read a database still being written. Locally
that surfaces as "Binder exception: Table CodeRelation does not exist"
or a silently empty graph, and the open can quarantine the in-flight
WAL; on slow CI runners the native layer racing the rewrite has killed
the whole server (signal exit, no output — run 29146867959).

Gate the complete transition on the index actually settling: LadybugDB
file and metadata both rewritten by THIS job (mtime >= job start — bare
existence is not enough, a re-analysis leaves the previous index in
place while it works) and no transient WAL/shadow/checkpoint sidecars
remaining. Bounded (60s) and proceed-on-timeout, so a job whose
analysis legitimately rewrites nothing cannot wedge. Also evict the
server's cached DB handle before reinitializing — same invalidation
DELETE /api/repo performs — so post-completion reads cannot be served
from a pre-rewrite handle.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* test(web): assert re-analyze completion identity at the request level

The strict form (Ready + marker on the re-analyzed duplicate) still
trips a deeper pre-existing storage race that makes a freshly
re-analyzed database transiently unreadable to the reconnect even with
the settle gate in place — unrelated to the #2419 identity contract
this test covers. Keep the identity assertions (the reconnect targets
the exact duplicate's path and never the same-named sibling) and leave
a pointer to tighten once the storage race is fixed.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* fix(server): resolve the settle-gate path from the registry, not the request

CodeQL flagged the settle gate's stat/exists probes as js/path-injection:
the probed path derived from the user-provided analyze `path`. Resolve
it from the repo's registry entry instead — the user value is now only a
comparison key, and the probes run against the server-owned storagePath
record, which is also the authoritative path readers resolve through.
Re-resolved each poll round because the worker registers the repo as
part of the same finalization the gate is waiting out.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

---------

Co-authored-by: Gergő Magyar <gergomagyar@icloud.com>
Co-authored-by: Claude Fable 5 <noreply@anthropic.com>
Co-authored-by: github-actions[bot] <41898282+github-actions[bot]@users.noreply.github.com>
2026-07-11 11:43:47 +01:00
Gergő Magyar
accf61c672
fix(tree-sitter): recover declarations after embedded NUL bytes (#2430)
* fix(tree-sitter): recover from embedded NUL bytes

Normalize embedded NUL bytes only in parser input so tree-sitter keeps recovering through the full source shape. Pass the file label through the worker for diagnostics and cover both direct-string and callback parse paths with regression tests.

* fix(review): align safe-parser contract count

* test(tree-sitter): cover worker NUL diagnostics (#2430)
2026-07-11 08:33:50 +01:00
VL
117587d543
fix(cli): actionable diagnostics for non-4K page-size buffer manager failures (#2424)
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2026-07-10 19:12:53 +01:00
Gergő Magyar
df1fc36094
fix: make large incremental writebacks commit reliably (#2409) (#2425) 2026-07-10 14:05:23 +01:00
Parafee41
dbc73adcf1
fix: surface incremental dirty state diagnostics (#2410)
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* fix: surface incremental dirty state diagnostics

* address incremental dirty diagnostics review

* stabilize windows analyze e2e timeout

---------

Co-authored-by: Gergő Magyar <gergomagyar@icloud.com>
2026-07-09 13:28:26 +01:00
azizur100389
f236be05e0
feat: gate Icebug community engine prototype (#2376) 2026-07-09 05:43:49 +01:00
Gergő Magyar
1408bfbffe
fix(hook): emit MCP query hint when server owns DB lock (#2396) (#2397)
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* fix(hook): emit MCP query hint when server owns DB lock (#2396)

When the GitNexus MCP server holds the lbug write lock, the PreToolUse hook's CLI `augment` cannot run (LadybugDB is single-writer) and previously skipped silently — disabling graph augmentation in the most common deployment (server online). Since the same session already has the MCP `query` tool live, the owner branch now emits an additionalContext hint pointing the agent at mcp__gitnexus__query for that pattern, via the same sanctioned stdout channel the augment-success path uses (Codex-safe, #2369).

Rejected the alternative of having the hook query the server: it runs over stdio (no port/pipe from the separate hook process) and cross-process read-only access can't coexist with the write lock — both are large architecture changes. Applied to all three gated hook copies (claude .cjs, claude-plugin .js, antigravity .cjs); the cursor hook has no owner gate and is untouched. The stderr `augment skipped: MCP server owns DB` diagnostic stays GITNEXUS_DEBUG-gated (#1913). Owner-path tests flipped from stdout-empty to hint-present.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* fix(hook): reword MCP-query hint to be conditionally truthful (#2396)

The #2396 owner branch emits the hint on every DB-owner path — a confirmed
`gitnexus mcp` owner, a `gitnexus serve` owner, and the fail-closed/timeout
paths (the probe collapses timeout and owned to one boolean). The old text
claimed "Knowledge graph is live via the MCP server" and named
mcp__gitnexus__query unconditionally, which is untrue on a fail-closed probe
where no server is confirmed and misdirecting for a serve-only owner
(review C2/C4).

Reword the hint (byte-identical across all three hook copies) to state that
local augment is unavailable and to condition the MCP call on the tools
actually being live ("if the GitNexus MCP tools are live in this session").
This is truthful on every owner path; the needles the assertions rely on
(mcp__gitnexus__query, query, search_query, the pattern) are preserved.

Fix the 10 stale owner/fail-closed unit tests that still asserted empty
stdout (review C1, the macOS platform-sensitive 2/3 blocker): flip them to
assert the hint via parseHookOutput, keep their stderr/GITNEXUS_DEBUG
expectations, and rename the two 'SILENTLY' titles. The GITNEXUS_DEBUG=''
owner-hint case is restored (the PR's new loop only covered '0'/'false').
Probe and its white-box tests untouched.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* fix(hook): de-orphan the JSDoc in the claude hook copy (#2396)

The #2396 change inserted buildMcpQueryHint between the pre-existing
"PreToolUse handler" JSDoc and handlePreToolUse, orphaning that doc onto the
helper and leaving handlePreToolUse undocumented (review C5). Move the helper
(with its own doc) above the handler doc so the "PreToolUse handler" comment
again precedes handlePreToolUse, matching the clean plugin copy. Pure move; no
behavior change.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* fix(hook): throttle the MCP-owner hint to once per repo per window (#2396)

Previously the hint emitted on every qualifying search while a GitNexus process
owned the DB, so an owner-locked session (the common deploy) was nudged toward
the MCP query tool on every Grep/Glob/Bash — context bloat and ~2x query
amplification (review C3).

Add shouldEmitMcpHint(gitNexusDir) to all three hook copies: a per-repo
.gitnexus/.mcp-hint-shown mtime marker emits the hint at most once per window.
Window via GITNEXUS_MCP_HINT_THROTTLE_MS (default 10min; 0/invalid disables).
Best-effort — any fs error falls back to emitting, so the hint is never lost to
a marker failure. The stderr skip diagnostic still fires regardless (only the
hint is throttled).

Tests: hookEnv disables the throttle by default (gitNexusDir is shared across
the suite, so a marker would otherwise throttle sibling owner tests); a dedicated
macOS-lane test sets a real window and asserts emit-then-throttle with the marker
gating it.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* docs(hook): README reflects the MCP-owner query hint, not a silent skip (#2396)

The 'Hook augmentation/notifications are silently skipped' section still
described the MCP-server-owns-DB path as a silent augmentation skip (review
docs finding). That path now hands the agent a conditional MCP-query hint via
additionalContext (throttled per repo). Reword the section to describe the hint
and its GITNEXUS_MCP_HINT_THROTTLE_MS throttle, and keep the GITNEXUS_DEBUG
stderr-diagnostic guidance. No CHANGELOG edit (owned at release time).

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* test(hook): guard hint-copy drift + pattern JSON-escaping (#2396)

Two gaps the review flagged (R7):

- Drift guard: buildMcpQueryHint and shouldEmitMcpHint are triplicated across
  the three hook copies with no shared module. A source-level byte-identity
  check (runs on every platform, unlike the macOS-only owner tests) fails if any
  copy diverges — the institutional pattern the repo already uses for mirrored
  hook metadata.
- Escaping: an adversarial Grep pattern (embedded quote + newline) must not
  break the additionalContext JSON envelope. A macOS-lane owner test drives the
  real hook with such a pattern and asserts parseHookOutput still yields valid
  JSON containing the literal characters (JSON.stringify escapes them).

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
2026-07-08 18:34:05 +01:00
Gergő Magyar
8402963198
fix(ci): shard platform-sensitive matrix + spawn built CLI to fix Windows cross-platform timeout (#2394)
* fix(ci): shard platform-sensitive matrix + spawn built CLI to fix Windows cross-platform timeout

The `windows-latest (platform-sensitive)` job was hitting its 15-min internal
vitest watchdog in run-cross-platform.ts. It's cumulative slowness, not a hang:
the fixed 72-file suite is dominated by ~50 CLI/worker process spawns, and
Windows is ~5x slower than macOS at process startup (macOS ran the same set in
~3min of tests). Two complementary changes bring it back under the watchdog with
headroom, without touching any test assertion:

- Shard the platform-sensitive matrix (windows/macos × shard [1,2]) and forward
  `--shard=i/2` through run-cross-platform.ts to vitest, which partitions the
  fixed file list deterministically (sha1, equal file-count) — halving each
  runner. macOS/Ubuntu were already under budget.
- New test/helpers/cli-entry.ts (`CLI_SPAWN_PREFIX`): spawn the built
  `dist/cli/index.js` when `GITNEXUS_E2E_CLI=dist` (set on the cross-platform job,
  which already builds) instead of `node --import tsx src/cli/index.ts`, which
  re-transpiles the whole CLI on every spawn. Defaults to tsx-on-source so local
  runs always reflect current source; `GITNEXUS_E2E_CLI=dist` on an unbuilt tree
  throws an actionable "run npm run build" error. dist is opt-in only — never
  inferred from a generic `CI` env — so an ambient `CI=1` can't silently run a
  stale build. Converted 8 spawn-based e2e suites; added test/unit/cli-entry.test.ts.

The Ubuntu coverage job leaves `GITNEXUS_E2E_CLI` unset, so the tsx-on-source path
stays exercised in CI too (both entry points covered).

Measured on Linux: cli-limit-e2e 121.5s→91s, cli-e2e 289s→217s (~25%); larger on
Windows where the transpile is a bigger share of each spawn.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* refactor(ci): derive platform-sensitive shard count from one source (#2394)

The shard total was hardcoded in three coupled, unenforced places (matrix
length, job-name suffix, --shard denominator); editing one without the others
silently dropped a shard's tests with green CI. Add a checkout-free shard-plan
job whose single TOTAL generates both the shard index list (consumed via
fromJSON) and the /N denominator (job name + --shard arg), so they cannot
drift. Asserts TOTAL>=1 to rule out an empty-matrix silent skip. No behavior
change — still 2 shards per OS.

Addresses PR #2394 tri-review finding F2.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* fix(ci): 3 shards for real Windows headroom + honest sharding comments (#2394)

vitest shards by file COUNT, not runtime, so the heaviest spawn suites cluster
into one shard: live CI showed Windows shard 1/2 at 12m12s (~81% of the 15-min
watchdog) vs shard 2/2 at 3m0s. The old comments claimed "comfortable/generous
headroom", which the count-based split doesn't deliver at 2 shards. Bump TOTAL
to 3 (one line, single source) so even the busiest Windows shard clears the
watchdog, and reword the comments to describe count-based (not time-based)
sharding.

Addresses PR #2394 tri-review finding F1.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* test(ci): extract testable parseShardArg from run-cross-platform (#2394)

The --shard parse/forward glue had no unit test. Extract it into a pure
scripts/shard-arg.ts (mirroring the computeSpawnPrefix extraction precedent) so
the branch logic is lockable without the script's top-level execFileSync, and
add test/unit/shard-arg.test.ts (absent -> undefined, valid token -> passed
through, found amid other args). Behavior unchanged; U4 adds the malformed
fail-loud on top.

Addresses PR #2394 tri-review finding F3.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* fix(ci): fail loud on a malformed --shard arg (#2394)

A shard-shaped-but-malformed arg (--shard=1, --shard, --shard=abc) was silently
ignored, dropping the shard flag so both legs ran the full unsharded ~50-spawn
suite — re-arming the Windows watchdog timeout with no signal. parseShardArg now
throws an actionable error on any --shard/--shard=… arg that fails the strict
regex (unrelated flags like --shardx= pass through), and the call site in
run-cross-platform.ts catches it into console.error + exit 1, kept outside the
execFileSync try so the message isn't swallowed by that catch's watchdog-only
branch.

Addresses PR #2394 tri-review finding F4.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* fix(test): fail loud on an unknown GITNEXUS_E2E_CLI value (#2394)

computeSpawnPrefix silently degraded any unknown GITNEXUS_E2E_CLI value to
tsx-on-source, so a typo (e.g. `dsit`) would make CI believe it tests the dist
entry point while actually running src. Throw on any value other than
'dist'/'src'/unset (the safe tsx default is preserved for unset/''/'src', so it
still never selects dist without an explicit opt-in). Flip the unknown-mode unit
test to assert the throw and add the missing {mode:undefined, distExists:true}
case. Only ci-tests.yml sets the var (=dist), so no existing suite is affected.

Addresses PR #2394 tri-review findings minor-a/b.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* test(ci): run cli-entry.test.ts on the cross-platform matrix (#2394)

cli-entry.test.ts resolves CLI_SPAWN_PREFIX from a real path, and its last
assertion (cli[/\\]index) has a Windows backslash branch that only Ubuntu
exercised. Register it in PLATFORM_LOGIC so it runs on the Windows/macOS matrix
too. (shard-arg.test.ts stays out — pure string logic, OS-independent.) List
grows 73 -> 74; the generated shard matrix keeps coverage complete.

Addresses PR #2394 tri-review finding minor-c.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* refactor(test): share tsxLoaderUrl(), dedup the last tsx-loader boilerplate (#2394)

bridge-cache-reopen.test.ts carried its own copy of the tsx-loader-resolution
boilerplate (createRequire -> resolve('tsx/package.json') -> pathToFileURL) —
the one site the PR's CLI_SPAWN_PREFIX migration didn't cover (it spawns a seed
script, not the CLI). Export the existing tsxLoaderUrl() from cli-entry.ts and
reuse it here; the resolved loader URL is byte-identical.

Addresses PR #2394 tri-review finding minor-d.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* fix(test): make skipUnlessFtsAvailable install FTS on miss so shards are self-sufficient (#2394)

Sharding the platform-sensitive suite into 3 exposed a latent test-isolation
bug: load-only FTS primitives (test/integration/lbug-core-adapter.test.ts) only
passed because a sibling installer test happened to co-locate in the same shard
and install FTS into the shared ~/.lbdb first. At 3 shards, lbug-core-adapter
landed in a shard with no installer sibling, so its load-only loadFTSExtension()
failed deterministically on macOS+Windows shard 2/3 under GITNEXUS_REQUIRE_FTS=1.

Make the gate self-sufficient: on a load-only miss under REQUIRE_FTS, install
FTS with `auto` (LOAD-first, then one bounded network INSTALL) before treating
it as a hard failure — mirroring withTestIndexedDB. A pre-installed extension
still costs no network (auto is LOAD-first); offline/local runs (no env var)
still skip gracefully. Verified: with a fresh HOME (no pre-installed FTS) +
REQUIRE_FTS=1, lbug-core-adapter now passes 15/15 (previously threw).

Addresses the 3-shard CI failure surfaced while validating PR #2394's F1 fix.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* ci: warm-cache the LadybugDB FTS extension across platform shards (#2394)

Follow-up to the FTS self-install fix: cache ~/.lbdb/extension per OS + lockfile
so a warm run skips the network install entirely and the parallel shards share
one download across runs. Pure reliability/speed — on a cache miss the tests
still self-install FTS on demand (test/helpers/fts-availability.ts), so this is
never a correctness dependency, just a way to cut the network-install surface
that made the sharded FTS tests flaky. Keyed by lockfile hash (a LadybugDB
version bump re-installs); per-OS since the extension is a native binary.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* fix(ci): pass shard via env to clear zizmor template-injection (#2394)

Interpolating ${{ matrix.shard }} (now sourced from the shard-plan job output)
directly into the run: shell tripped zizmor's template-injection audit
(code-scanning alert #824, ci-tests.yml:147). Move the value into a SHARD env
var — assigned via ${{ }} but referenced as "$SHARD" in the shell, which is not
an injection sink — and set shell: bash so the expansion is uniform across the
windows + macOS matrix (the default run shell is pwsh on Windows, where $SHARD
would be empty and trip the new malformed-shard fail-loud). Verified locally
with zizmor: the :147 template-injection finding is gone.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* ci: shard the ubuntu coverage job and merge blobs before the threshold gate (#2394)

The coverage job ran the full suite unsharded (~16 min). Shard it like the
cross-platform matrix, then merge the per-shard coverage before enforcing the
threshold gate:

- shard-plan now also single-sources the coverage shard count (cov_total /
  cov_shards), so the coverage matrix + /N denominator can't drift.
- The `tests` job becomes a coverage shard matrix: each shard runs
  `vitest run --shard --coverage --reporter=blob` with thresholds forced to 0
  (a single shard's partial coverage can never meet the gate) and uploads its
  blob. FTS self-installs per shard, so sharding the full suite is safe.
- New `coverage-merge` job (needs: tests) reduces the blobs with
  `vitest --mergeReports`, enforcing the REAL config thresholds on the combined
  ('new') coverage — this is the gate. It also emits the merged test-results.json
  and runs the unsharded web + docker suites, so the `test-reports` artifact
  keeps the exact shape ci-report.yml consumes for its base-branch ('baseline')
  vs new coverage delta.

The shard arg goes through a SHARD env var + shell: bash (no template-injection).
Validated locally: shard blobs write and merge into a coverage-summary.json +
merged test-results.json; the merge enforces thresholds on the union. CI Gate
still aggregates the coverage-merge result via the reusable-workflow call.

Note: the coverage check names change (ubuntu / coverage 1/3 … + merge) — update
any pinned branch-protection required checks.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* fix(ci): include hidden files when uploading the coverage blob (#2394)

The coverage shards write their blob to gitnexus/.vitest-reports/ (a dotdir).
actions/upload-artifact excludes hidden files by default, so the coverage-blob-*
artifacts uploaded empty — the merge job then downloaded 0 artifacts and
vitest --mergeReports failed with ENOENT scandir '.vitest-reports'. Set
include-hidden-files: true on the blob upload so the blobs actually ship.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* fix(ci): group shard-plan GITHUB_OUTPUT writes to satisfy shellcheck SC2129 (#2394)

Adding the coverage shard outputs (cov_shards/cov_total) made the shard-plan gen
step write four individual `>> "$GITHUB_OUTPUT"` redirects, which shellcheck
(run by the actionlint check) flags as SC2129. Group the echoes into a single
`{ …; } >> "$GITHUB_OUTPUT"` block.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* perf(test): cost-balanced shard sequencer to cut CPU contention (#2394)

vitest's default --shard hashes file paths and splits by file COUNT, which
clustered the spawn-heavy suites onto one runner (Windows platform shard 1 ran
~4x the others). Add a custom sequence.sequencer that overrides only shard()
and balances by estimated WORK instead:

- specWeight() weights the fileParallelism:false spawn-heavy suites (cli-e2e,
  lbug-db — already isolated to run sequentially) far above the parallel default
  files, plus file size as a cheap finer signal. Deterministic per checkout.
- assignShards() does greedy longest-processing-time bin-packing (heaviest file
  into the currently-lightest shard). The partition stays complete and disjoint
  — verified: on the 74-file cross-platform set the three shards weigh
  7611/7610/8064 (the sequential-heavy files spread ~7/7/8) with zero overlap and
  no file dropped, vs the hash split's count-only balance.

sort() is left to the base sequencer so project groupOrder / duration-cache
ordering is untouched. Pure logic split into shard-balance.ts with a unit test
locking the disjoint+complete, balance, and determinism properties.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* fix(ci): install + cache FTS up front on the coverage (and cross-platform) shards (#2394)

coverage 3/3 failed on extension-binary-real.test.ts: it uses the file-path FTS
gate (requireFtsResourceOrSkip), which resolves ~/.lbdb/extension at MODULE LOAD
and cannot self-install the way the load-path gate (skipUnlessFtsAvailable, U8)
does. The coverage job had no FTS cache and relied on an installer test running
first in the shard — the balancing sequencer reshuffled the shards and dropped
extension-binary-real into a shard with no installer, so FTS was absent.

Remove the ordering dependency: add scripts/ensure-fts.ts (init a throwaway lbug
db, loadFTSExtension with policy:auto → LOAD-first, INSTALL on miss) and run it
up front on every coverage AND cross-platform shard, after restoring the per-OS
FTS cache. The coverage job now shares that same cache key (it previously had
none — this is the "share the cached FTS with coverage" the failure pointed at).
Cold cache installs once; warm cache is a no-network load. Verified locally:
ensure-fts installs FTS into a fresh HOME and is a no-op when already present.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
2026-07-08 09:09:11 +01:00