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44 commits

Author SHA1 Message Date
Ankit Verma
8bd71c8335
feat(staleness): report diverged and unknown index state instead of fresh (#3257)
* feat(staleness): report diverged and unknown index state instead of fresh

A staleness check collapsed every git failure into { isStale: false,
commitsBehind: 0 }. On a branch-pinned serve clone, a failed re-index
leaves the recorded commit orphaned by the --depth 1 fetch; once the
reflog expires and gc prunes it, rev-list fails and the index silently
reads as fresh while still behind.

checkStaleness / checkStalenessAsync now return an additive status:
current, behind, diverged (rev-list failed but HEAD resolved and differs
from lastCommit) or unknown (HEAD unresolvable, no lastCommit, timeout).
isStale and commitsBehind keep their values in every case.

One payload builder (core/staleness-status.ts) feeds MCP list_repos, the
hot read tools and /api/repos + /api/repo. diverged carries a hint and no
invented count; unknown appears on listings only. The helpers live in a
pure module so existing vi.mock stubs of git-staleness stay valid.

gitnexus group status no longer prints "-1 commits behind".

Fixes #3256

Co-Authored-By: Claude Opus 5 <noreply@anthropic.com>

* Address PR review feedback (#3257)

- Document the `current` arm `fromHead` can return after a failed `rev-list`.
  The `staleness-status.ts` status list, the `fromHead` docstring and the
  `stalenessForTool` comment each named only `diverged`/`unknown`, so all three
  described a contract the helpers do not have.
- Document both `unknown` rows on the group status type: no recorded commit
  (`indexStale: true`, `commitsBehind: -1`) and a git probe that could not
  answer (`indexStale: false`, `commitsBehind: 0`), which do not agree on
  either field.
- Update both shipped `gitnexus-guide` copies to the new wire shape
  (`{ status, commitsBehind?, hint? }`), add a `diverged` example carrying no
  count, and state `unknown` is reported only by the `list_repos` listing.
  Presence now means "not `current`", not "behind N". Pinned in
  shipped-skills-sync.
- Lock the timed-out `rev-list` short-circuit with staleness-timeout.test.ts:
  it asserts `unknown` from exactly one git spawn, so removing the `killed`
  guard (which would probe HEAD again and double the #3232 bound) now fails.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* Claim only the uncountable gap in the diverged hint (#3257)

`fromHead` reaches the `diverged` branch on any non-timeout `rev-list` failure
where `rev-parse HEAD` resolves to a different SHA. It compares the two SHAs and
runs no reachability check, so a transient object-read failure lands there while
`lastCommit` is still an ancestor of HEAD — and the hint told the operator the
commit was gone from history. `staleness-status.ts` already documents `diverged`
as only "provably not at HEAD; the count is unknown", so the string was also the
one place contradicting its own contract.

The hint now states what the check established and hedges the usual cause:
"Index is not at HEAD and the commit gap could not be counted — the recorded
commit may no longer be in this clone's history."

Updated with it: the `staleness.test.ts` diverged assertion, and the `diverged`
example plus its lead-in sentence in both shipped `gitnexus-guide` copies (still
byte-identical). `mcp/resources.ts` needs no change — it interpolates
`staleness.hint`, holding no copy of the text.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* test(staleness): cover the remaining #3256 review test gaps

The tri-review's lower-priority gaps, each now locked:

- staleness-fallback.test.ts: after a failed (not timed-out) rev-list,
  both helpers report `current` when HEAD alone still resolves to the
  indexed commit, `diverged` when it resolves elsewhere, and `unknown`
  when it cannot be read, each from exactly rev-list + rev-parse. This
  complements staleness-timeout.test.ts: a timeout spawns once, any other
  failure probes HEAD.
- list_repos carries the listing-only `unknown` and a count-free
  `diverged`; `current` carries nothing.
- group status: a resolvable repo with no recorded commit composes to
  indexStale: true, commitsBehind: -1, status: unknown and renders as
  "STALE (? commits behind)", through the real groupStatus path rather
  than a hand-built row.

Each test was checked against a mutation of the code it guards (the
fromHead current arm, the group no-commit literal, list_repos
includeUnknown); every mutation fails its test.

Co-Authored-By: Claude Opus 5 <noreply@anthropic.com>

---------

Co-authored-by: tech-admin3 <tech-admin@kodnest.com>
Co-authored-by: Claude Opus 5 <noreply@anthropic.com>
Co-authored-by: Gergő Magyar <gergomagyar@icloud.com>
Co-authored-by: Gergo Magyar <gergomagyar0@gmail.com>
2026-09-11 08:07:37 +01:00
mengkaka
4154b63131
feat(indexing): add Objective-C semantic indexing support (#3179)
* docs: add Objective-C fork provider notes

* feat(objective-c): add deterministic provider and grammar

* feat(objective-c): finalize provider MVP

* fix(objective-c): harden provider integration

* fix(objective-c): normalize bare macro markers

* docs(objective-c): integrate provider documentation

* fix(objective-c): harden resolution and header classification

* fix(objective-c): complete provider follow-ups

* fix: address Objective-C review follow-ups

* chore: format Objective-C grammar sources

* fix(objective-c): harden review follow-ups

* Address PR review feedback (#3179)

Keep Objective-C chunking and macro recovery aligned with the grammar, and stop Community MEMBER_OF edges from leaking into symbol context.

Co-authored-by: Cursor <cursoragent@cursor.com>

* Address follow-up review on ObjC chunking and language fallback.

Keep preprocessor directive text from changing file-scope brace depth, group real ivar nodes, skip header modifiers, and restore Rakefile/Gemfile detection through getLanguageFromFilename.

Co-authored-by: Cursor <cursoragent@cursor.com>

* Parse Objective-C headers with the objc grammar in embeddings.

ensureAndParse and structural extraction now use the same content classifier as ingest, including method snippets from .h files, so Protocol/Category/Class chunks are not re-parsed as C++.

Co-authored-by: Cursor <cursoragent@cursor.com>

* Address PR review feedback (#3179)

Keep file-scope macro elision off C line splices and @interface/@protocol/@implementation bodies, and attach ivar attributes to the following instance variable when chunking.

Co-authored-by: Cursor <cursoragent@cursor.com>

* chore(bench): rebaseline Objective-C CSV emit

* feat(objective-c): add workspace resolution and linear emit benches

Plain .h files are classified as C++, so the ObjC pass could not
resolve #import of those headers. Load a C/C#-style workspace once
per pass, and keep protocol-candidate USES linear.

Refs #3179

Co-authored-by: Cursor <cursoragent@cursor.com>

* Address PR review feedback (#3179)

- Compare LadybugDB labels() as a scalar when excluding Community MEMBER_OF edges.
- Walk superclass members, skip file-static C sibling defs, and ignore comments in ObjC header/macro scans.

Note: pre-existing failure in objective-c-provider integration (worker-pool ready timeout) not addressed by this PR.
Co-authored-by: Cursor <cursoragent@cursor.com>

* Address PR review feedback (#3179)

Emit Objective-C declaration captures so compilation-unit siblings can share
header/implementation bindings, and keep class vs protocol visibility groups
distinct.

Note: pre-existing failure in worker-pool startup (GITNEXUS_WORKER_READY_TIMEOUT_MS) not addressed by this PR.
Co-authored-by: Cursor <cursoragent@cursor.com>

* Address PR review feedback (#3179)

Emit every comma-separated property/ivar declarator, and count @interface
after a multiline block comment closes so in-declaration macros stay intact.

Note: pre-existing failure in worker-pool startup (GITNEXUS_WORKER_READY_TIMEOUT_MS) not addressed by this PR.
Co-authored-by: Cursor <cursoragent@cursor.com>

---------

Co-authored-by: ximengkai <ximengkai@soyoung.com>
Co-authored-by: Gergő Magyar <gergomagyar@icloud.com>
Co-authored-by: Gergo Magyar <gergomagyar0@gmail.com>
Co-authored-by: Cursor <cursoragent@cursor.com>
2026-09-09 09:40:21 +00:00
ChunxueLi
19f6731c34
feat(java): resolve SpringContextUtil.getBeans(X.class) dynamic lookups (#2886)
* feat(java): resolve SpringContextUtil.getBeans(X.class) dynamic lookups

* fix(ingestion): make Spring dynamic lookups graph-correct

Capture Java and Kotlin lookups from ASTs and resolve them through scoped type bindings and transitive JVM assignability so emitted INJECTS edges are attributable, cache-safe, and production-tested.

Co-authored-by: Cursor <cursoragent@cursor.com>

* perf(ingestion): keep Spring lookup capture linear

Reuse Java and Kotlin scope-query call nodes instead of rewalking each AST, cache DI subtype closures, and enforce linear scaling with production-path benchmarks in CI.

Co-authored-by: Cursor <cursoragent@cursor.com>

---------

Co-authored-by: Gergő Magyar <gergomagyar@icloud.com>
Co-authored-by: Gergo Magyar <gergomagyar0@gmail.com>
Co-authored-by: Cursor <cursoragent@cursor.com>
2026-08-30 23:09:21 +00:00
DuduPhudu
48106d3c00
fix(ingestion): index NestJS decorator routes so api_impact and route_map stop reporting live endpoints as non-existent (#3017) 2026-08-27 08:35:36 +01:00
azizur100389
9d4f029001
fix(impact): mark Convex caller results incomplete (#3044)
* fix(impact): mark Convex caller results incomplete

* fix(storage): align Convex Const persistence
2026-08-26 12:54:00 +01:00
azizur100389
7f0ab16ffe
feat(routes): support JS data route tables (#2972)
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2026-08-18 04:39:45 +01:00
Gergő Magyar
77360e1043
fix(scope-resolution): make interface dispatch generic-instantiation aware (#2912) (#2939)
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* fix(scope-resolution): make interface dispatch generic-instantiation aware (#2912)

Interface-dispatch fan-out walked the subtype closure with generic arguments
erased, so `IValidator<string>` and `IValidator<int>` — one declaration, one
subtype list — were indistinguishable and a call through the first reached
`IntValidator.Check(int)`, a target no runtime dispatch can produce.

The arguments were already in the capture, unread: every language anchors
`@reference.inherits` on the whole base node while `@reference.name` keeps the
erased base. `ReferenceSite.typeArguments` is therefore derived generically in
`scope-extractor.ts` from the anchor's own spelling — no per-language query
changed — covering C#, Java, TypeScript, Kotlin, Go (`Base[int]` embedding),
Python (`Base[User]`) and Swift; Rust and Dart anchor on the bare name and get
nothing, which reads as "unknown". `preEmitInheritanceEdges` is the only code
that pairs a heritage site with a resolved (subtype, supertype), so it records
the instantiation there and hands it to the dispatch pass.

The closure is then walked carrying a substitution, as a type checker would:
`Wrapper<T> : IValidator<T>` binds T to the receiver's argument and stays
reachable from every instantiation, while its own subtypes are matched against
that binding. An incompatible hop is skipped without being marked seen, so a
type reachable by a second, compatible path still gets its edge, and without
descending, since its subtypes inherit the mismatch.

Pruning happens only on positive evidence that two instantiations differ.
Unknown arguments on either side, an arity that does not line up, an unresolved
qualified spelling of the same simple name, or an argument that might be a type
variable the language never captured all keep the target. Telling an uncaptured
type VARIABLE from a concrete type is the crux: `typeParameters` is absent both
for a non-generic declaration and for every declaration in a language whose
query omits `@declaration.type-parameters`, so the pass reads the evidence in
front of it — one run resolves one language, so a single generic declaration
anywhere in it proves the captures record parameters. A language recording
neither arguments nor parameters keeps exactly its pre-#2912 fan-out.

Type arguments are compared as resolved declarations rather than spellings, so
`Models.User` and an imported `User` are one type; the new optional
`ScopeResolver.normalizeTypeArgument` hook canonicalizes a language's predefined
aliases, implemented for C# (`string` ≡ `String`) where mixing the spellings
would otherwise delete a real implementor.

Fan-out cap, skipped-target reporting, overload selection and non-generic
closure behaviour are unchanged. SCHEMA_BUMP 60 -> 64: the heritage arguments
are a parse-time capture, so a warm cache would replay pre-fix sites and leave
the filter silently inert on unchanged files (61/62/63 are claimed by open PRs).

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01StNKYi7Qxv5DnSURZuFBef

* fix(scope-resolution): close the two generic-dispatch gaps (#2912)

The first commit left two shapes on the pre-#2912 fan-out. Both are now
covered, and the second one turned out to need a route the pipeline did not
have at all.

**Folded receivers (Cases 0 and 3b).** `this._validator.Check(x)` is typed by
the compound fold, and the fold answers with a CLASS — which is exactly what
loses the instantiation, since `IValidator<string>` and `IValidator<int>` fold
to one declaration. The fold now reports the SPELLING it typed each receiver
position from, through a pure side channel (`recordReceiverType`) added to the
one helper every declared-type route already shares plus the two return-type
routes; resolution is unchanged whether or not a caller passes it. The reader
keeps the last report and uses it only when it names the class the fold
returned, so an intermediate position cannot lend its arguments to another
class. This covers the dependency-injection shape the issue is really about —
a field-held generic interface — and multi-hop chains, where it is the last
hop's spelling that types the receiver.

**Rust and Dart heritage.** Neither recorded arguments, for two different
reasons, so both routes exist now:

  - Rust's `@reference.inherits` anchor is the trait identifier INSIDE a
    `generic_type`. Widening the anchor would move the site's range, and that
    range is part of every inheritance edge's id, so the arguments arrive
    through a new `@reference.type-arguments` sub-tag instead.
  - Dart's `implements` / `with` never become reference sites at all: they
    travel as heritage MARKERS and their edges are emitted by the language
    hook. The arguments ride the marker payload as an optional fourth field
    (dropped, not encoded, when the spelling contains the marker delimiter),
    and `ScopeResolver.emitHeritageEdges` now receives the same sink
    `preEmitInheritanceEdges` writes to, so whichever pass emits an edge
    records that edge's instantiation. Dart also gained the
    `@declaration.type-parameters` capture, without which its own type
    VARIABLES are indistinguishable from concrete arguments and
    `class Box<T> implements Validator<T>` would be pruned from every
    instantiation.

Note this makes Rust and Dart record their instantiations; it does not make
them fan out. Interface dispatch still fires only for a receiver whose folded
type is an `Interface` symbol, so a Rust `Trait` or a Dart abstract `Class`
receiver has no secondary targets to filter. Widening that gate emits new
edges for several languages and belongs to its own issue.

**Two matcher rules the wider coverage exposed.** A WILDCARD names a set of
types rather than one — `Repo<? extends User>` holds a `Repo<User>`, and
Kotlin's `Repo<*>` / `Repo<out User>` say the same — so a position with one on
either side is unknown; nullable spellings trip the same test, which costs a
little precision in the safe direction. And insignificant whitespace inside a
nested spelling (`Map<string, User>` vs `Map<string,User>`) is no longer a
difference.

One expectation changed in the #2833 field-receiver matrix: a
`Repo<Repo<User>>` receiver no longer reaches `UserRepo implements Repo<User>`.
That edge is precisely the false positive this issue is about, and the primary
edge to the interface's own declaration — which is what the matrix row exists
to prove — is untouched.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01StNKYi7Qxv5DnSURZuFBef

* refactor(scope-resolution): apply the quality pass to the #2912 change

Three cleanups, no behaviour change.

**One balanced-list scanner, not two.** `erasedTypeApplication` and
`typeApplicationArguments` each carried a copy of the same fiddly scan — one
bracket list, balanced, closing on the last character, non-empty — differing
only in what they did with the result. Both now call `balancedTailList`; the
rule that rejects `User[][]` and `Repo<User>?` lives in one place instead of
being free to drift between two.

**The receiver's arguments are parsed after the gates, not before them.**
`emitInterfaceDispatchFor` takes the receiver's declared SPELLING and parses it
itself, once the owner is known to be an Interface with subtypes. Every one of
the five cases calls it unconditionally and the overwhelming majority of
receivers are concrete classes that return at the first line, so the parse was
running per resolved receiver site to be discarded immediately. Case 4 and Case
6 now hand over the string they already hold, and the folded-receiver helper
returns the recorded spelling rather than parsing it.

**One question gates the whole instantiation apparatus.** Inside the closure
walk, the graph-id lookups now hang off "is the supertype's instantiation
known?" — false for every non-generic receiver and for every language that
captures no heritage arguments, which is what makes those walks cost exactly
what they cost before #2912.

Also lifted the argument-route choice in `pass5CollectReferences` out of a
nested ternary into a named `heritageTypeArguments`, where the reason the
explicit sub-tag wins over the anchor text can be stated once.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01StNKYi7Qxv5DnSURZuFBef

* test(scope-resolution): cover generic interface dispatch in Kotlin and Go (#2912)

Extends the #2912 dispatch coverage past C#/Java/TypeScript. No production
code changes — the derivation is language-agnostic by construction
(`heritageTypeArguments` reads the heritage anchor's own spelling), so the
question was only which languages actually reach the filter.

Kotlin rides the shared heritage pre-pass; Go reaches the same filter from
the other side, matching implementors structurally while the receiver's
`Validator[string]` spelling carries the instantiation. Both are confirmed
to prune the mismatched implementor.

Each language gets a NON-GENERIC control asserting the fan-out still reaches
every implementor. Without it the `not.toContain` assertion passes just as
well when a language emits no dispatch edge at all — which is what Dart,
Python and Rust were measured doing for this receiver shape, generic or not.
They are deliberately not asserted on here: a "filtered correctly" test over
a path that never fans out measures nothing.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_015Px638Zyqa9CJMUU7DsJoB

* test(bench): re-baseline the Rust and Dart capture fingerprints for #2912

The Rust trait-impl and Dart heritage capture changes this branch makes are
additive TEXT on existing matches — each carries the instantiation the clause
was written with — so they drift the scope-capture digest without adding or
removing a match. The baselines were never re-measured when those captures
landed, which left `measure.mjs --check` red on this branch independently of
the merge.

Re-measured rather than hand-edited. Rust's capture_groups_fp (3556) and
fixture_count (202) are unchanged across the move, which is the evidence that
this is digest drift and not a capture-set regression. The other 13 languages
are byte-identical; 15/15 pass.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_015Px638Zyqa9CJMUU7DsJoB

* refactor(scope-resolution): quality pass over the #2912 change

Cleanup only — no behavior change. Findings from a four-angle review (reuse,
simplification, efficiency, altitude), applied where they were verified.

Reuse / duplication:
* `stripTrailingCallSuffix` was a second copy of `matchingOpenParen`'s backward
  balanced-paren scan. Both now live in `template-arguments.ts` beside
  `balancedTailList`, for the reason that helper was shared in the first place:
  two copies of a scan this fiddly are free to disagree.
* The two call-return arms of the compound fold repeated the same four-part
  expression character for character; they share `classOfReturnType` now, the
  return-type twin of `classOfDeclaredType`, which keeps the "look up by
  rawName, report the erased application" pairing in one place.
* `pipeline/run.ts` implemented first-writer-wins twice — once in the pre-pass
  and once in the provider sink. One store, one sink, one rule; the pass keeps
  its `Set<string>` return and the callable-flow-only arm stops building an
  empty map to satisfy a widened return shape.

Simplification:
* `subtypeParametersComplete` dropped a disjunct that could never decide: every
  `subDef` reaching it comes out of the same loop that sets
  `languageCapturesTypeParameters`, from exactly those defs.
* The heritage-argument lookup asked "is the supertype's instantiation known?"
  three times; `superGraphId` now gates the block once.
* `TypeArgumentResolver` and `HeritageInstantiationResult` un-exported — no
  consumer outside their module.

Efficiency (all on the per-site dispatch walk):
* `resolveSupertypeArgument` captures only the site, so it is built once per
  site instead of once per subtype visited; the subtype's scope id is looked up
  once per subtype instead of once per argument position.
* `erasedTypeApplication` no longer runs on every fold hop through a call — the
  spelling is built only once the lookup has found a class, since it is
  discarded otherwise.
* `normalize`+`compact` computed once per side rather than twice.
* Regex literals and the identity `normalize` fallback hoisted to module scope.
* C# `System.` prefix stripped with `startsWith`/`slice` instead of a regex.

Verified: tsc clean, build clean, 1994 scope-resolution unit tests, 171
generic-dispatch + generic-field-receiver integration tests, 15/15 capture
bench fingerprints unchanged.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_015Px638Zyqa9CJMUU7DsJoB

* style: apply Prettier to the two files the quality pass reformatted

Whitespace only — `quality / format` (npx prettier --check .) was red.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_015Px638Zyqa9CJMUU7DsJoB

* fix(scope-resolution): close the generic-dispatch review findings (#2912)

Addresses the gitnexus-check review on #2939.

A repeated type variable was rebound rather than unified: `class C<T> :
Pair<T, T>` accepted a `Pair<string, int>` receiver, with `T = int` silently
replacing `T = string` and the bogus substitution carried to the next hop.
It now unifies, and prunes only on the same positive evidence the concrete
path demands — an undecidable repeat keeps the target with no binding.

A type PARAMETER of the declaration enclosing either side is now recognised
and never compared. `subtypeParametersComplete` is evidence about the
SUBTYPE's parameter list and says nothing about a `T` written at the call
site, so `void Run<T>(IValidator<T> v) { v.Check(x); }` pruned every
implementor: unbounded, `T` grounds to nothing; bounded, it grounds to its
BOUND. Both read as a difference of type. That is the missing-edge failure
this filter is built to avoid, and it is the common dependency-injection
shape in C#, Java and Kotlin.

Making that recognition reliable is why generic METHODS now capture
`@declaration.type-parameters` in C#, Java and Kotlin — TypeScript already
did, which is why its generic functions never had the defect. The capture
feeds the existing `bindsTypeParameter` guard, so a method-level `T` also
stops resolving to a same-named class in every other lookup.

C# alias normalization additionally strips the `global::` qualifier, which
`import-decomposer` already unwraps elsewhere: `global::System.String` read
as unequal to `string` and pruned a live implementor.

The C# captures golden fixture is regenerated for the new capture; the
extractor reads `@declaration.type-parameters` generically, so no reader
changed. SCHEMA_BUMP 64 already covers these capture changes.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_015Px638Zyqa9CJMUU7DsJoB

* fix(scope-resolution): close the two remaining gitnexus-check findings (#2912)

`balancedTailList` counted ONE bracket family, so a crossed pair slipped
through: scanning `Foo<Bar]>` it never sees the `]`, reaches the final `>` at
depth zero, and reports `Bar]` as a balanced argument list — which
`typeApplicationArguments` then splits and `erasedTypeApplication` rebuilds a
spelling from. It now tracks a stack of expected closers, so every closer must
match the opener it actually closes and a crossed pair declines to `undefined`,
the "unknown" both callers already fail open on. Well-formed mixed nesting
(`List<Dict[a, b]>`) is unaffected.

C# `normalizeTypeArgument` stripped `System.` from every qualified spelling, so
`System.Custom` answered `Custom` and compared equal to an unrelated `Custom`
elsewhere in the workspace. The strip is now earned: a keyword answers from the
alias table first, and the qualifier is dropped only when what remains IS a
predefined type. `System.Custom` is returned as written and goes to the identity
comparison instead — the step that can actually tell two declarations apart.
`global::System.String` still meets `string`.

Both are pinned by unit tests, including the well-formed mixed nesting and the
`global::`-qualified ordinary type that must keep its qualifier.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_015Px638Zyqa9CJMUU7DsJoB

* docs(csharp): record why a shadowed `String` keeps its implementor (#2912)

Answers a review finding rather than changing behavior.

A workspace may declare its own type named `String`, shadowing the BCL simple
name, and the alias table then reads `IValidator<String>` as the `string`
instantiation and keeps that implementor. That is the SAFE direction, not an
oversight: pruning instead would rest on the belief that two spellings differ,
which is the missing-edge failure `generic-instantiation.ts` exists to avoid.

Resolving rather than normalizing cannot settle it either — the identity
comparison needs a `definitionId` from both sides, and a built-in name carries
none, so "built-in versus workspace-declared implies different" would be a new
prune with no positive evidence behind it. The cost is one surplus edge for that
pair, which is exactly the pre-#2912 fan-out and no worse.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_015Px638Zyqa9CJMUU7DsJoB

* refactor(scope-resolution): pair the receiver spelling with the class structurally (#2912)

The fan-out needs the spelling a receiver position was typed from, because the
class the fold returns has lost the generic arguments. That was carried by a
PASS-LEVEL mutable holder, written by every declared-type lookup anywhere in the
fold and read back through a def-id coincidence check, with the holder cleared
by hand before each call site. Three things were load-bearing and none were
enforced:

* the reset had to be remembered at every call site. It was not: the Case 3b
  retry (`rawName` then `rawName + '()'`) reset once, BEFORE the first attempt,
  so a spelling reported by the attempt that failed could be attributed to the
  one that succeeded.
* the holder outlived every resolution, so a site that resolved through a route
  reporting nothing could read the previous site's spelling if the def ids
  happened to line up.
* the pairing itself was inferred from "whichever lookup reported last", not
  from the fold's own bookkeeping — losing branches (an MRO walk that moved on,
  a step later folded past) report too.

`foldReceiverChain` already had the answer and threw it away: its final
`FoldState` holds `def` and `declaredType` produced by the SAME step. It now
reports that pairing last, so the structural route is the one that stands.

`resolveCompoundReceiverTyped` returns `{def, declaredSpelling}` and owns a sink
created and read within the single call, which is what removes the reset
discipline — a local cannot be forgotten, and each of the two retry attempts
carries its own. The def-id guard stays as the check that a report names the
class actually returned.

Behavior is unchanged: 1975 scope-resolution unit tests, 177 generic-dispatch
and generic-field-receiver integration tests.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_015Px638Zyqa9CJMUU7DsJoB

---------

Co-authored-by: Gergo Magyar <gergomagyar0@gmail.com>
Co-authored-by: Claude Opus 5 (1M context) <noreply@anthropic.com>
2026-08-13 14:50:53 +01:00
DuduPhudu
223ac7010d
feat: close reported graph blind spots in reference resolution, analyze and storage (#2856)
* fix(mcp): report UNKNOWN risk when an upstream impact walk finds no callers

`risk: LOW` asserts "safe to change" — a claim ABOUT callers. An upstream
walk that resolved none has nothing to base it on: the symbol may be
genuinely unused, or reached only through a reference class the index does
not record (a property access on a plain object, a bare-identifier read of a
module-scope const). Seeding LOW from an empty result is the false-safe
signal `anyKnownRisk` already refuses to emit on the ambiguous-candidate
path, and that #2687 removed by making an undetermined impactedCount `null`
rather than `0`.

Zero-caller upstream results now report risk UNKNOWN with a riskNote saying
absence of edges is not evidence of disuse. Downstream is untouched: an
empty downstream walk reports resolved callees, not safety.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* feat(javascript): emit ACCESSES for bare-identifier reads of module-scope consts

A constant read only as a bare identifier — `Math.max(LIMIT, n)`, a default
parameter value, `return LIMIT` — minted no reference site at all, because
JS captured only `@reference.read.member`, which requires a receiver a bare
identifier does not have. So "who uses this constant?", the question behind
every dead-code trim and constants refactor, answered with a confident zero
in both directions.

The rest of the machinery was already in place: `FIELD_KINDS` accepts
`Const`, the scope query already declares it via `@declaration.const`, and
`read` maps to ACCESSES for any resolved target. This adds the missing
capture in VALUE POSITIONS ONLY (call arguments, default-parameter values,
return statements) — a blanket `(identifier)` rule would mint a site for
every token in the file, which is unaffordable at repo scale and would keep
alive the block-local symbols `pruneLocalSymbols` exists to drop.

Cross-file readers are NOT yet covered: the site exists and a call through
the same import statement resolves, but a value-kind def does not link
across the import edge. Recorded as a todo with the investigation.

PARSE_CACHE_VERSION bumped 44 -> 45: this is parse-time capture emission, so
a warm cache replays the pre-change capture set and the new edges never
appear — observed directly, a full `analyze --force` produced a
byte-identical graph until the cache was cleared by hand.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* test(javascript): pin A1/A5 plain-object property acceptance criteria

Fixture plus todo specs for the four shapes plain-object property access has
to answer: object-literal keys indexed as Property nodes, a read through the
holding variable, a property WRITE, and a read through an untyped param.

Records the investigation so the work is resumable: the parse-query pattern
scoped to literals bound to a variable matches correctly (verified against
the raw JAVASCRIPT_QUERIES), but no Property node reaches the graph and
local-symbol-pruner is not the cause — it drops only Const/Variable/Static.
The remaining gate is in the parse worker's node-creation path.

No production code — specs only, so the suite stays green.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* feat(javascript): index object-literal keys of a named object as Property nodes

Idiomatic JS models configuration as an object literal, not a class, but
Property definition nodes existed only for DECLARED CLASS FIELDS. A config
field therefore had no symbol at all: `context({name: 'exitMinAtrMult'})`
answered "not found" for a field read and written throughout a live code
path, and ACCESSES had no target to point at.

Both halves are added for keys of a literal BOUND TO A VARIABLE — the parse
query mints the graph node, the scope query mints the def the resolver can
aim at. Unbound literals are deliberately excluded: an inline call argument
or a JSX prop bag is call-site data, not a named surface other code
references, so a node per key there would add volume without adding an
answerable question.

This lands the definition-node half only. The ACCESSES edges still require
receiver resolution — typing the const that holds the literal to the
literal's scope for the precise case, and name-based matching at reduced
confidence for the untyped-param (option bag) case. Both are recorded as
todos with the mechanism each needs.

Also records a trap that cost a wrong conclusion: under vitest the parse
worker runs the BUILT dist code (parse-impl resolves parse-worker.js, absent
under src/, and falls back to dist), so parse-query changes are invisible to
tests until `npm run build`.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* test(cache): move the SCHEMA_BUMP pin to 45

The pin is the guard that makes two branches claiming one cache-schema
number fail loudly instead of silently serving each other's entries, so a
bump is only half-done until the pin moves with it. The bump itself landed
with the JavaScript bare-identifier captures; this is the other half.

Caught by the guard working exactly as designed — the suite failed with
"expected 45 to be 44" rather than letting a mismatched pair through.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* feat(scope-resolution): resolve plain-object property access by unique name

Idiomatic JS reads configuration off an object whose receiver cannot be
typed — an options bag passed as a parameter, a destructured handle, an
imported literal. No precise pass resolves those, so a field read and
written across a live code path produced no ACCESSES edge at all and "who
reads this setting?" answered a confident zero.

A last-resort pass runs after every precise pass and sees only what they
left behind. For each still-unresolved read/write site it asks whether
exactly ONE Property in the workspace carries that name. If so the read
almost certainly means it. If two or more do, nothing is emitted and the
site is COUNTED as ambiguous — a guess between them would be a coin flip,
and a wrong edge in the pre-edit safety gate is worse than a missing one.

Uniqueness is the right gate because it recovers exactly the names worth
recovering: distinctive domain fields (exitMinAtrMult, bookNotionalUsdt)
are unique in a repo and resolve, while generic keys (id, name, data) are
not and are skipped — which is where name matching would over-connect.

Bounded four ways:
- Confidence 0.5, the global tier, with the inference named in the reason,
  so a consumer can filter inferences without losing scope-resolved edges.
- Never second-guesses a precise result: sites already resolved are
  excluded, because first-write-wins stops a duplicate but NOT a second
  edge to a different target.
- Honors `fieldFallbackOnMethodLookup`. A statically-typed language opts
  out of name matching precisely because it over-connects; inferring an
  ACCESSES edge by name is the same claim and must obey the same opt-out.
- Requires an explicit receiver — a bare identifier is not a property
  access, and matching one by name would link a local to an unrelated key.

Indexes graph nodes rather than scope defs because an object-literal key
mints a Property NODE but no scope-resolution DEF: `localDefs` and
`scope.bindings` are both empty for exactly the population this serves.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* feat(analyze): record a collapsed graph write instead of reporting fresh

The dangerous half of a broken refresh: metadata IS written, so the index
reads as fresh, hooks re-arm, and every tool answers from a graph missing
most of its edges — indistinguishable from a codebase that genuinely has no
such relationships. Reported in the field as edges collapsing 23009 -> 2170
and as a CodeRelation table that never materialized.

`analyze` now compares the relationship count the pipeline PRODUCED against
what the DB hands back after the write. Both numbers are already in scope at
the same point, so the shortfall is provable rather than inferred — no
comparison against the previous index, which cannot distinguish a failed
write from a repo that legitimately shrank. A missing relation table needs
no special case: it reads back as a persisted count of zero.

On a collapse the run records `graphWriteCollapsed` in metadata, which
`getIndexIncompleteReasons` turns into `graph-write-collapsed` so status and
the MCP resources report the index INCOMPLETE rather than fresh.

A ratio, not equality: some relationship types do not round-trip one-for-one
and `--pdg` writes MORE rows into the same table, so demanding equality
would fire on healthy runs. Only a collapse is a defect. Fail-safe when the
expected count is unavailable — an implementation that offloads
relationships out of memory may not be able to report a total, and a false
"your index is broken" is worse than a missed one.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* fix(ingestion): qualify object-literal Property ids by their owning object

Two config objects in one file that share a key name generated the same
`Property:<file>:<key>` id and COLLAPSED INTO ONE node, so two distinct
settings became a single symbol. Worse, the merged name then looked
workspace-unique to name inference, which happily resolved reads of it to a
node representing both — a wrong edge in the pre-edit safety gate, which is
precisely what the unique-name pass is bounded to avoid.

`objectLiteralOwnerInfo` already existed for exactly this ("so two
constructors in one file that both define `bar` stay distinct nodes") but
was gated to `Method`. `Property` now opts in.

`findObjectLiteralBindingInfo` returns `ownerName` only when asked. Its
`Method` ids must stay byte-identical — qualifying them would rewrite every
object-literal method id in every indexed repo — while object-literal KEYS,
indexed only since A1/A5, have no such history to preserve.

Found by a test written for the ambiguity path rather than by review: the
suite reported one node where two were expected, and an edge where none
should exist. Both are now pinned, along with the detection boundaries of
the B2 collapse check, which was previously an untestable inline expression
and is now a pure function.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* feat(typescript): index type aliases and shape members as symbols

A TS frontend models its API contracts as `type X = { … }` and `interface`,
so a field on one is exactly what "who breaks if I remove this?" is asked
about. Three gaps made that unanswerable, all in the TypeScript queries:

1. No `type_alias_declaration` -> `@definition.type`, so an alias minted NO
   NODE AT ALL and a context() lookup on an exported contract type answered
   "Symbol not found". TypeScript was the ONLY language missing this — Rust
   (type_item), Kotlin (type_alias), Swift (typealias_declaration) and Dart
   all emit it. The alias was declared for scope resolution but never became
   a graph symbol.
2. No `property_signature` in the parse query, so INTERFACE members minted no
   Property nodes either — the upstream report's "class/interface index fine"
   holds only for the type, not its fields.
3. No `property_signature` in the scope query, so even with nodes present the
   resolver had no member declaration to aim at. Its sibling
   `method_signature` -> `@declaration.method` already existed; only
   properties were missing.

Interface bodies and object-type aliases both spell members as
property_signature, so one pattern per query covers both shapes.

Lands the SYMBOLS, not yet the ACCESSES edges: the shape is already a
class-like scope and now has member declarations, but no edge forms — the
remaining link is owner/type-binding, recorded as todos with the diagnosis.
Note TypeScript sets fieldFallbackOnMethodLookup:false, so unlike JavaScript
there is deliberately no name-based fallback here; the precise path is the
only route by design.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* test(golden): accept interface members in the mini-repo snapshot

Drift is entirely the new TypeScript shape-member indexing: the fixture's
three interfaces (ValidationResult 2, DbRecord 3, LogEntry 3) contribute
exactly 8 Property nodes, each with exactly one HAS_PROPERTY owner edge.

Verified before regenerating rather than after: every pre-existing count is
untouched (CALLS 9, IMPORTS 12, DEFINES 16, HAS_METHOD 1, MEMBER_OF 12,
STEP_IN_PROCESS 12), so nothing was rewired — the digest moved only because
8 edges were added. The fixture's inline `return { valid: false, … }`
literals correctly produced nothing, confirming the object-literal rule
stays scoped to variable-bound literals.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* fix(analyze): never report a collapse from a non-numeric count

The B2 check reported healthy runs as total graph-write collapses. A
non-numeric `expected` (a graph implementation reporting no total, a
lightweight pipeline result) does not skip the guards — it INVERTS them:
`undefined < 100` is false, so the small-repo exemption never fires, and
`0 >= undefined * 0.5` is `0 >= NaN`, also false, so the ratio check
"passes" as well. Both bounds silently evaporate and every such run is
flagged.

That is precisely the failure this check was written to catch, reproduced
inside the check itself: an unmeasurable quantity treated as a measured
zero. Both sides are now validated as finite numbers before any comparison.

`persisted` is also passed as UNKNOWN rather than zero when the DB was not
demonstrably readable: `getLbugStats` flattens "no connection", "query
threw" and "empty table" all into `edges: 0`, so `stats.nodes > 0` is used
as independent evidence the read happened at all.

Caught by the existing run-analyze suites, not by the new unit tests — those
exercised the pure function with well-formed numbers and were blind to the
integration's actual inputs. Both cases are now pinned.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* feat(typescript): make object-type aliases own their members

A TS object-type alias declares the same `property_signature` members as the
interface beside it and answers the same question, but was not a member
owner: its fields were minted with bare ids and no owner edge, so two
aliases in one file sharing a field name collapsed onto one node, while the
identical interface resolved normally.

`type_alias_declaration` joins CLASS_CONTAINER_TYPES (and
CONTAINER_TYPE_TO_LABEL, as that set's invariant requires — a container
missing there gets orphaned member edges or a wrong owner label). Aliases
with no object type (`type Id = string`) declare no members, so they own
nothing and are unaffected.

This also lands the INTERFACE field -> consumer edges, verified on the
mini-repo fixture rather than only on a purpose-built one: `saveToDb` now
links to `ValidationResult.value`, and `formatLogEntry` to `LogEntry.level`
and `LogEntry.message` — three real contract-field reads that previously had
no graph path at all. Golden updated: +3 ACCESSES, no node changes.

The ALIAS field -> consumer edge is still not linked and is recorded as a
todo with the exact blocker: resolving a receiver typed as the alias needs
the NAME to resolve to a class-like def, and `isClassLike` is
Class|Interface|Struct|Record|Enum|Trait. That predicate is read from ~12
sites including MRO and heritage, and every language mints TypeAlias, so
widening it would enrol aliases in linearizations where they do not belong.
Widening only the scope index was tried and reverted — the type-name walkers
gate on it independently, so it fixed nothing and left dead code. That needs
a deliberate "shape-like" concept, not more call-site widening.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* docs(test): record the traced diagnosis for the unlinked alias field edge

Traced to the end rather than left as "needs investigation", so the next
attempt starts from facts:

  1. Graph side is COMPLETE and symmetric with the interface —
     Property:...:LiveModeConfig.bookSlots is owner-qualified and carries
     HAS_PROPERTY.
  2. Resolution DOES reach resolveClassBindingForName('LiveModeConfig')
     (instrumented) and misses.
  3. It misses because the module scope binds LiveModeIface:Interface,
     renderAlias, renderIface — and not LiveModeConfig. The alias has no
     binding on the receiver's scope chain at all.
  4. The TS scope query tags aliases @declaration.type, but normalizeNodeLabel
     accepts only typealias / type_alias and has no "type" case, so it returns
     undefined. Kotlin and Dart use @declaration.type_alias; TypeScript is
     alone on the dead tag.
  5. Retagging is NECESSARY BUT NOT SUFFICIENT — tried, and the binding still
     does not appear, so a second gate exists in how a declaration anchored on
     a node that is ALSO a @scope.class anchor is attached: the alias appears
     to bind inside its own scope rather than hoisting to Module, where
     interface_declaration evidently does hoist.

An isShapeLike predicate (the nominal-vs-structural split: shapes declare
members, nominal types participate in MRO) plus a mirrored
findShapeBindingInScope were built and REVERTED along with the retag. With no
binding on the chain they never fire, and shipping inert widening is worse
than shipping none — the same standard applied to the earlier scope-index
attempt. The design is recorded here; it is worth doing once step 5 is fixed,
and it also unblocks Rust's parked union_item, which the MEMBER_OWNER_NODE_TYPES
comment documents as the same gap in another language.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* feat(scope-resolution): resolve cross-file value references, skip block-locals

Two halves of the same question, "who uses this constant?".

CROSS-FILE. `resolveReferenceSites` runs against the registries and, as its
own comment says, "imports live in finalized bindings the registries can't
see" — which is why free CALLS need `emitFreeCallFallback`. Reads had no
counterpart, so `import { LIMIT }` followed by a bare use resolved to nothing
while a CALL through the very same import statement resolved fine. This adds
the read/write counterpart, reusing `findValueBindingInScope` (which walks the
FINALIZED chain) rather than inventing a lookup. Confidence 0.9: the import
names the def, so this is precise resolution, not inference.

BLOCK-LOCALS. Bare-identifier capture also matches a read of a block-local
`const`, and an edge to one keeps alive exactly the inert locals
`pruneLocalSymbols` exists to drop — a pruned node becomes a retained node
plus an edge, in every function of every indexed repo. Emission now takes the
set of value defs bound at MODULE scope and drops ACCESSES to
Const/Variable/Static outside it. The cross-file pass carries the same
guarantee structurally: a def in another file cannot be a block-local of this
one, so it skips same-file hits entirely.

The block-local leak was already shipped in the intra-file A2 commit and was
found only because a test was written for the guard rather than the feature —
the same way the object-literal id collision surfaced.

Verified on the full resolver matrix: 3172 tests, golden unchanged.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* fix(lbug): diagnose a vanished staging CSV instead of surfacing a Binder error

A forced rebuild could fail with "COPY failed for File: Binder exception: No
file found that matches the pattern .gitnexus/csv/file.csv" and then an ENOENT
on .gitnexus/csv/rel_Folder_File.csv — two engine-level messages that name
neither a cause nor a remedy, which is where several field reports end.

Only tables with rows > 0 enter the COPY manifest (csv-generator.ts), so an
absent file was WRITTEN during this run and removed since. Both COPY loops now
preflight and say exactly that, with the row count, both causes the reports
point at (a second `gitnexus analyze` on the same repo — they share
.gitnexus/csv — or an external cleanup of .gitnexus/), and the action to take.

Scope note, deliberately narrow: this does not attempt to fix WAL corruption
or checkpoint rotation. Those already have detection and recovery hints
(isWalCorruptionError, WAL_RECOVERY_SUGGESTION, the configurable
wal-checkpoint-threshold), and the ~6000 lines added to lbug/ + storage/ since
v1.6.9 — index-lock.ts most of all, which serializes writers and plausibly
closes the concurrent-run class outright — postdate every report in the
window. Guessing at unreproducible durability faults would be speculation;
making the one failure with NO handling legible is not.

An existing overlap test induced this exact scenario (a manifest entry
pointing at a missing csv) and asserted on the engine's wording. Its intent —
that a node-COPY failure is rethrown at the FK barrier rather than swallowed —
is unchanged and still asserted; only the message it matches moved.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* feat(scope-resolution): split shape-like from class-like, linking alias fields

Completes A4: a field on a TypeScript object-type alias now links to the code
that reads it, the last unanswerable half of "who breaks if I remove this?"
for a TS frontend that models contracts as `type X = { … }`.

`isClassLike` answered two questions that only coincide for classes:
  1. does this declare MEMBERS I can look up?   — a SHAPE (structural)
  2. does this participate in inheritance / MRO? — a NOMINAL TYPE
An object-type alias is (1) and emphatically not (2) — it has no supertypes
and no place in a linearization. Widening `isClassLike` to buy (1) would have
enrolled every language's aliases (Rust type_item, Kotlin/Swift/Dart
typealias, C typedef) into MRO and heritage, so the two questions now get two
predicates. Call sites split by which they ask, and their names already said
which: `resolveInheritanceBaseInScope` and `resolveQualifiedInheritanceBase`
keep `isClassLike`; receiver typing and member OWNERSHIP take `isShapeLike`.

Three parts, each necessary and none sufficient alone:
- `findShapeBindingInScope`, mirroring `findValueBindingInScope`'s established
  relationship to `findClassBindingInScope` (same walker, different accepted
  def-type), consulted only AFTER the class lookup misses so a class of the
  same name always wins.
- `populateClassOwnedMembers` uses it, so alias members get an `ownerId` and
  are registered under the alias. Without this the receiver resolved to the
  alias and then found no members under it.
- The TS scope query tags aliases `@declaration.type_alias`, not
  `@declaration.type`: `normalizeNodeLabel` accepts typealias / type_alias and
  has no "type" case, so the old tag mapped to NO label and TypeScript aliases
  produced no scope-resolution def at all. Kotlin and Dart already spelled it
  this way; TypeScript alone was on the dead tag.

An earlier attempt concluded a further "scope-attachment gate" existed. That
was wrong and is worth recording: scope extraction runs in the parse WORKER,
which loads built `dist`, so the retag was never executed. Rebuilt, the alias
hoists to Module scope exactly as the interface does. Same trap as the parse
query — `src` edits to anything the worker runs are invisible until
`npm run build`.

Typedef and Union stay out of `isShapeLike` deliberately: they belong
conceptually (the union_item note on MEMBER_OWNER_NODE_TYPES records the same
gap) but neither is wired as a member container, so including them would widen
a predicate nothing exercises.

Verified on the full resolver matrix: 3173 tests, golden unchanged.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* test(typescript): pin the type-alias capture to a tag that maps to a label

The capture test asserted `@declaration.type`, the tag that
`normalizeNodeLabel` does not recognize (it accepts typealias / type_alias and
has no "type" case). So the test passed for as long as the tag was broken: it
checked only that the capture FIRED, never that it resolved to anything, while
TypeScript aliases produced no scope-resolution def at all.

Updated to the working tag and given a second assertion that the derived kind
string is one the label mapper accepts — the property that actually matters,
and the one whose absence let a dead tag sit pinned.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* fix(lbug): declare TypeAlias member pairs so analyze does not abort

Making object-type aliases member owners emits HAS_PROPERTY from a `TypeAlias`,
and the relation schema declared no such pair. The emit therefore threw
`UndeclaredRelationPairError` and the ENTIRE analyze died on any repo
containing `type X = { ... }` — a hard stop, not a dropped edge. Found by
running the analyzer over a real 16k-node TypeScript repo, not by a test.

`Method` is declared alongside `Property`: a member written
`type Handler = { onClick(): void }` is a method_signature and would fail in
exactly the same way.

Why every existing test missed it: the resolver suites build an in-memory
graph via `runPipelineFromRepo` and never write to LadybugDB, so the schema
constraint was never exercised. `structural-pair-coverage.test.ts` is the one
suite that does run the emitters against the declared pairs — and its own
docstring names the gap: coverage is bounded by NON_BRIDGE_CORPUS, "a new
structural emitter should land with an entry here". This adds that entry,
pinning TypeAlias|Property and Interface|Property as sentinels.

Verified the guard is not vacuous: removing the pair again makes the suite
fail with undeclaredPairs: ["TypeAlias|Property"].

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* fix(processes): trace depth-first so multi-hop flows are detected

D1 ("query ranks frontend components above the backend module that owns the
concept") and D2 ("processes is dominated by trivial mechanical chains") are
the same defect, and neither is about ranking or selection.

The walk stops after a fixed NUMBER of traces, so traversal order decides which
traces those are. Breadth-first reaches every shallow terminal before any deep
one, so the quota filled with the shortest paths in the graph and the walk
stopped — `maxTraceDepth: 10` was never approached. Measured on a real repo
before the fix: of 300 processes NONE exceeded 7 steps and 90% were 3-4. A
multi-hop business flow (signal → order → exit) therefore had no process that
could represent it, and `query` could only rank the mechanical pairs that did
exist. Step 4 of the caller already sorts by length and dedupes by endpoint —
it was always asking for the deepest traces this walk could give it.

Depth-first descends to a terminal first, so the same quota is spent on paths
worth keeping. Cost is unchanged: same budget, same cycle guard, same depth
ceiling — only the order differs.

Measured on the same 16k-node repo, same build and flags, BFS vs DFS (an
earlier comparison was discarded as confounded — it crossed builds and --pdg):

  steps   6-8:  50 → 168   (3.4x)
  totals:      844 → 806

and the reported query moved from `LiveSetupView → Cn` (a React component) to
`ReconcilePositions → IsTpInProfit / WithHeld / ShouldNotify` — server-side
exit management, which is what was asked for.

`traceFromEntryPoint` is exported for the test. Traversal order is unobservable
through `processProcesses`: `findEntryPoints` supplies several starting points,
so a deep chain is traced from inside it whatever the order does. A test at
that level passes under BOTH traversals — the first version of this test did
exactly that and guarded nothing. Driving the walk directly, it fails under
breadth-first with "expected 3 to be greater than 3".

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* docs(test): correct a stale status note left behind by a later fix

The A1/A5 header still said "edge resolution REMAINING ... neither is
implemented". Both shapes resolve — the typeable receiver precisely, the
untyped one by workspace-unique name — and the tests below assert exactly that,
so the note contradicted the file it sat on.

It was accurate when written and went stale when the work continued past it.
Left as-is it would tell a reviewer that a landed feature is missing.

The TRAP note is kept: the parse worker still runs built dist under vitest, and
that is still the trap it describes.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* feat(scope-resolution): index literals behind identity-preserving wrappers

`export const INERT_EXIT_CONTRACT = Object.freeze({ ... })` minted no
`Property` node for any of its keys. The object-literal rule matches
`variable_declarator > value: (object)` as a DIRECT child, and freezing puts a
call expression in between — so the shape whose fields are most worth querying
was the one shape the rule could not see. Freezing a config object is how JS
publishes an immutable contract, which is why this reads as a confident zero
on exactly the fields a reader cares about.

The allowlist is three functions, not "any call". `Object.freeze`, `seal` and
`preventExtensions` RETURN THE ARGUMENT THEY WERE GIVEN, which is what makes
the literal's keys members of the bound name. For `const x = compute({ a: 1 })`
the literal is an argument and `x` holds compute's return value, so attributing
`a` to `x` would be a fabrication.

Two negative controls, because the obvious one is vacuous: a bare-identifier
callee is rejected structurally and would pass with no allowlist at all, so the
assertion that actually pins the predicate uses `Object.entries` — identical
shape, differing only by name. Verified load-bearing by adding `entries` to the
allowlist and watching that test alone fail.

SCHEMA_BUMP 46 -> 47: parse-time emission, so a warm cache replays the pre-fix
capture set. Observed as a false negative first — `analyze --force` returned
the old node set until the on-disk cache was removed by hand.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* fix(scope-resolution): narrow multi-candidate property names by scope

Workspace uniqueness was the wrong denominator. Measured on the reporting
repo: `exitMinAtrMult` has 26 `Property` definitions — 16 in one-off
`scripts/`, 7 in the frontend, one in a test, and exactly ONE in the backend
that reads it. Every backend read was refused because of competitors the
reader cannot see. The gate was not too permissive or too strict, it was
scope-blind.

A name with several definitions is now narrowed before being abandoned:
same-file first, then files the reading file directly imports, using the
finalized import graph rather than a path-shape heuristic. Exactly one
survivor at the first non-empty tier resolves; anything else stays refused.
A tier holding several candidates stops the walk instead of falling through —
local evidence that is itself ambiguous still contradicts reaching further out.

Confidence stays 0.5 at every tier. Narrowing changes which candidate is
chosen, not the kind of claim: it is still a name match, and the round-1
contract is that filtering on confidence drops all name inference at once.
The reason string now names the tier that fired.

Ambiguity reporting goes from a count to the actual names (capped), because a
count says a gap exists while the names say which fields are unanswerable.

Measured on that repo, backend readers of `exitMinAtrMult` go 0 -> 24 and
total readers 9 -> 45, including the two call sites in
`oppositeSignalExitManager.js` the report singled out. Both narrowing tests
were mutation-checked by dropping the import evidence and confirming they, and
only they, fail.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* feat(scope-resolution): capture destructured parameter keys as property reads

`function exit({ exitMinAtrMult = 0 })` reads that property off whatever the
caller passes, exactly as `cfg.exitMinAtrMult` would. It never appears in a
member_expression, so it had no reference site at all — and this is the shape
the function that IMPLEMENTS a behaviour uses, so the most relevant reader was
the one systematically missing from "who reads this setting?".

Uses a distinct `@reference.read.destructured` anchor rather than
`@reference.read.member`. The latter is filtered emit-side to matches with a
member_expression ancestor, because calls and writes share its shape, and a
destructuring pattern has none — reusing the tag would have been silently
dropped by that filter. The `read.` head already maps to a read kind, so no
mapping change is needed.

Scoped to formal_parameters. A destructuring binding elsewhere
(`const { x } = require('m')`) is frequently an import rather than a field
read, and minting a property read there would attribute module bindings to
unrelated same-named keys.

All three cases (default value, bare shorthand, renamed key) mutation-checked
by removing the patterns and confirming those three tests, and only those,
fail. The renamed case also asserts the edge points at the KEY and that the
local alias mints nothing.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* fix(scope-resolution): link type consumers to the type they name

An exported contract type owned its members after round 1 and still answered
`incoming: {}`, so "what breaks if I remove this field?" — the question a
contract type exists to answer — had no edge to walk. Measured on the
reporting repo: all 324 TypeAlias nodes AND every Interface node had DEFINES
as their only incoming edge.

Two independent causes, and the second is why the first was not enough.

TypeScript captured no type references at all — only cpp and csharp did — so
an annotation naming a declared type minted no reference site. Added for
annotations, generic arguments and `as` assertions, anchored to those contexts
rather than a bare `(type_identifier)`, which would also match the name in
`type X = …` and make every declaration a consumer of itself.

That alone fixed interfaces and left aliases still empty. `TypeAlias` was
missing from `LINKABLE_LABELS`, so alias graph nodes were never indexed in
`nodeLookup` and `resolveDefGraphId` could not bridge a def to its node — the
edge was dropped AFTER a successful lookup. `CLASS_KINDS` has always listed
TypeAlias and the ClassRegistry returned the def correctly, which is what made
this read as a resolution failure; instrumenting the lookup showed it
returning the right def all along and moved the search one table over. Exactly
the bug already documented two entries above it for Trait.

Fixes every language that spells an alias this way — TypeScript, Kotlin, Dart
and Rust all emit `@declaration.type_alias`.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* feat(scope-resolution): capture record construction as property writes

The read side answered well after the narrowing work while "who SETS this
field?" still missed the code that stamps the value. A record built inline —
`return { exitContract: { exitMinAtrMult: settings.x } }` — is bound to no
variable, so it minted no definition and its keys referenced nothing.

Modelled as WRITE REFERENCES, deliberately not definitions. The round-1 rule
already mints Property nodes for literals bound to a variable; minting more for
anonymous records would add same-named competitors to the very name-narrowing
that makes these fields resolvable — measured at 26 competing definitions for
one field on the reporting repo, which is what made every backend read
unanswerable in the first place. A construction site is a USE of a field, not
another declaration of it.

Two positions only: nested under a key, and returned. Both are records with a
name attached (the key, or the function). An inline call argument
(`doThing({ id: 1 })`) stays excluded for the same reason round 1 excluded it
from definitions — it is call-site data, not a named surface — and is asserted
as such.

The enclosing literal is the receiver and it is anonymous, so these route
through the same narrowing and the same refusal-to-guess as every other
untyped receiver.

Verified on the reporting repo: `entryPlan.js` went from no rows to
`selectExitEnvelope` as a writer of `exitMinAtrMult`. Both captures
mutation-checked.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* feat(processes): select round-robin by terminal so the list is not one flow repeated

Ranking was `sort by length` alone, so the top of the list was one behaviour
described many ways: eleven of the top fourteen processes on the reporting
repo were four entry points crossed with three terminals of the SAME
date-window utility cluster. Genuine call chains, but a reader learns one
thing from fourteen entries, and the repo's own domain flows sat below them.

Selection now round-robins across TERMINALS, deepest first. Depth still orders
within a terminal and still leads the list; what changes is that no terminal
takes a second slot until every other has had a first.

Keying on the entry point was tried first and made it worse — many files
declare a `main`, so each was a distinct entry that round-robin then awarded
its own slot, and `Main -> AlignWindowEnd` went from one row to eight. The
repetition was never in where a flow starts.

Measured on that repo: distinct terminals in the top 20 went 3 -> 20, and its
domain flows (`ReconcilePositions -> ...`) moved into the top 4%.

Two things this deliberately does not claim. The reported cause — ranking
rewarding fan-in, promoting chains ending in widely-called helpers — measured
FALSE: those terminals have one caller each (`alignWindowStart` 1,
`validateSymbol` 1). A fan-in discount was implemented against that hypothesis,
measured, and reverted for moving nothing. And a business flow still cannot be
a process in its own right: the walk only emits at a leaf, at max depth, or on
a cycle, so a flow whose meaningful endpoint calls onward survives only as
whatever leaf it bottoms out in. Both are recorded in the code so neither
reads as settled.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* test(structural-pairs): pin the type-annotation USES pair

R2-2 emits USES INTO a `TypeAlias`, so the pair is `Function|TypeAlias` — a
different table from the `TypeAlias|Property` entry added in round 1, and one
that entry stays green without. `TypeAlias` is on the eleven-table list this
suite exists for, and an undeclared pair does not degrade: it throws
`UndeclaredRelationPairError` and kills the entire analyze on any repo
containing an annotated type. Every resolver suite still passes, because they
build an in-memory graph and never write to the DB.

That exact failure shipped once in this PR already. Two emitters into the same
label, each with its own way to reach a released build.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* fix(scope-resolution): build the module-level set before the out-of-core seal

Review blocker. Under `GITNEXUS_DISK_SCOPE_INDEX=1` the seal replaces every
ParsedFile with a scope-STRIPPED copy, and the block-local filter's set was
built after it — so it walked `scopes: []` for every file, came out empty, and
the filter read that as "no def is module-level" and dropped EVERY
`Const`/`Variable`/`Static` ACCESSES edge in the repo. All languages, all
files, including the module-scope-const edges this PR exists to add. Nothing
threw and nothing logged, on the path the largest repos take: the exact
confident-empty answer the PR is about.

Built above the seal now, from `parsedFiles`, and passed as `undefined` rather
than an empty set when no scope was inspectable — an empty set is a legitimate
answer ("this repo has no module-level value defs") and must not be
indistinguishable from "could not look". Fails open; the block-local exclusion
is still asserted under the seal, since that is correctness rather than
optimization.

Also widens module level past `kind === 'Module'`. A `Namespace` scope (TS
`namespace`, Rust `mod`, C++/C# `namespace`) holds importable values too, and
treating its consts as function-locals dropped their reads. Included only when
the whole chain to the root is Module/Namespace, so a namespace declared inside
a function body stays local — asserted both ways.

That fixture then failed for a third reason: `@reference.read.identifier`
existed ONLY in the JavaScript query, so A2 did not work for TypeScript at all.
Added there, and both languages widened to `variable_declarator value:` and
`binary_expression` operands — the gaps review named between what A2 claimed
and what it matched.

Nothing covered `GITNEXUS_DISK_SCOPE_INDEX`. The new parity test asserts the
seal changes no edge, and was verified against an emulation of the original
bug: same-file readers vanish and only the cross-file reader survives.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* fix(typescript): anchor property_signature to declared shapes

Review blocker, and it reproduces end to end. `property_signature` occurs in
EVERY object_type in the TS grammar, not only in an interface body or an
alias's object type, so inline parameter types, inline return types and nested
object types all matched — and the enclosing-container walk hung each one off
the nearest class, interface or alias. Measured against the unanchored rule,
all four appeared as members of shapes that do not have them:

  Property:contracts.ts:Svc.inlineParamOnlyKey
  Property:contracts.ts:Repo.inlineQueryOnlyKey
  Property:contracts.ts:NestedConfig.nestedOnlyKey
  Property:contracts.ts:buildInline.inlineReturnOnlyKey@46:33

When the inline member shares a name with a real one — `run(opts: { retries:
number })` inside a class that declares `retries` — `addNode` is
first-write-wins and the two distinct symbols merge onto one node, so every
context()/impact()/rename() answer about that field describes the merge. The
sibling JS object-literal rule in this same PR is anchored for exactly this
reason; this is the TypeScript half of the same fix.

`(A (B))` matches DIRECT children, so nested object types are excluded by the
same anchor rather than by a second rule.

The first version of these tests was VACUOUS and is recorded here because the
reason generalizes: a collision and a correct exclusion both leave exactly one
node behind, so counting ids cannot distinguish them. Every inline member in
the fixture is now uniquely named, which is the only thing that discriminates —
verified by restoring the unanchored rule and watching exactly those four
assertions fail. A fifth test asserts anchoring costs no real member.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* fix(analyze): correct the numbers feeding the graph-write-collapse guard

Review blocker. The predicate itself held under adversarial probing; every
defect was in what it was handed and what happened after it fired.

(a) `expected` was wrong twice. Under `GraphEmitSink` streaming the bulk types
leave the heap at parse time and never enter `relationshipCount`, so the count
understated the real volume by most of it and the ratio passed trivially —
on `force === true` runs, which include crash recovery AND the
`analyze --force` retry this check's own warning tells the operator to run.
Adds the manifest totals, the same correction the buffer-pool hint in this file
already makes for the same reason. Separately, an incremental run persists only
the changed subgraph while both counts are whole-scope: a 10,000-edge index
that lost 200 replacements reads 9,800 and is certified complete. The check is
skipped on that path rather than answered wrongly.

(b) A throwing edge count became a measured zero. `getLbugStats` initialised
its total to 0 and ran the query in a swallowing catch, so WAL/lock contention
during finalize — documented on this exact call — reported a healthy index as a
total collapse. It now returns `number | undefined`, and the caller requires
both a readable node count and a defined edge count.

(c) A total loss was exempted for being small. The min-edges rule tested
`expected` before looking at `persisted` at all, so `expected = 99,
persisted = 0` — every edge gone — stayed fresh and reported success. Total
loss is now decided first. The existing test asserted the defect; it now
asserts a PARTIAL shortfall, which is the case the exemption was written for.

(d) A detected collapse reported success and exited 0. It is different in kind
from the other incomplete reasons: those describe a run that did what it said
and left work for later, this one means most of your edges are gone and every
query answers a confident empty. The CLI now prints INCOMPLETE with the counts
and sets a non-zero exit code, and the flag crosses IPC so the worker cannot
send a clean `complete` either.

Nothing exercised this wiring — only the pure helper. Adds tests for all four,
each written so the pre-fix arithmetic fails it.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* fix(scope-resolution): keep unique-name property inference inside one language

The pass indexed `Property` nodes from the whole shared graph. Per-language
gating decides whether it RUNS for a language; it never restricted which nodes
could be TARGETS. So the only carrier of a name could be in another language
entirely, and a read here resolved to it on name uniqueness alone — no owner,
no file, no call path.

Reproduced: a Java class declaring `private int loyaltyPointsBalance` and a JS
`cfg.loyaltyPointsBalance` on an untyped parameter produced an ACCESSES edge
from the JS function to the Java private field. Confidence does not mitigate
it, because `minConfidence` defaults to 0 — the tier is only a filter for
consumers who ask for one.

Candidates are now restricted to files in the language's own `parsedFiles`,
which is a precise restriction rather than a heuristic and needs no new node
property.

Every other fixture in the suite is single-language, so this could not be
caught anywhere by construction. The new fixture is deliberately polyglot and
asserts both halves: no cross-language edge, and a same-language unique name
still resolves.

Known and not addressed here: the index is still O(total graph nodes) and is
rebuilt once per qualifying language, the per-language whole-graph-scan pattern
`phase.ts` hoisted out for `sharedNodeLookup`. Hoisting it belongs with that
machinery rather than in this fix.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* fix(processes): explore siblings in source order, log the exhausted budget

`slice(0, maxBranching)` selected the FIRST N callees while `pop()` explored
them LAST-first, so the trace budget went to the last-declared branch. For
`main() { init(); loadConfig(); run(); shutdown(); }` the walk spends itself on
`shutdown` and can drop `init` — the earliest steps of a flow, which is the
opposite of what a process describes. Selecting first-N and exploring last-first
was simply inconsistent; pushing in reverse makes the stack pop in source order.

Measured on the reporting repo, this costs depth: 6-8 step processes go 168 ->
146 of 816. Still roughly three times the pre-PR baseline of 50, and the right
trade — a deep branch is no longer reached by accident of being declared last.

The remaining limit is the BUDGET, not the traversal: with a fixed quota a deep
branch declared after enough shallow ones is not reached at all. That is now
asserted in both directions rather than left implicit, and the walk logs when it
stops with branches unexplored — a silently truncating cap reads as "this is
everything", the same confident-empty answer this work is about, and the repo
already sets that precedent for `dispatchFanoutSkipped`.

Removes the second depth test, which was vacuous: the note twelve lines above
it already said a `processProcesses`-level depth assertion passes under BOTH
traversals, and measured it does — breadth-first yields the same deepest
stepCount of 8, so it passed with the production change reverted. Traversal
order is asserted against `traceFromEntryPoint` directly; what is observable at
the pipeline level is which traces survive selection, which the diversity tests
cover.

Also renames `queue` to `stack` and corrects the BFS references in the module
docstring and the function's own JSDoc, which is what an IDE hover shows.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* fix(impact): carry riskNote onto ambiguous candidates and separate UNKNOWN's two meanings

Two problems on the ambiguous fan-out, which builds its own candidate object
rather than returning the single-symbol shape.

The narrowed type had no `riskNote` field and never read one, so a candidate
that resolved and found no callers reported `risk: UNKNOWN` with nothing
attached — losing the entire point of the change on the path where the reader
has the least context, since the name is ambiguous there by definition.

And `UNKNOWN` used to mean exactly one thing on this path: the probe threw. The
zero-caller branch gives it a second meaning, so an all-UNKNOWN fan-out could
no longer be told apart from a broken one. Candidates now carry `probeFailed`,
and the comment asserting the old reading is corrected.

Also aligns `gitnexus-web`, which review flagged as giving a different verdict
for the same symbol. That surface answers in prose rather than an enum, and its
message said the symbol "appears to be unused (not called by anything)" — the
identical false certainty in words. It now carries the same MEANING rather than
the same field. Downstream wording is unchanged: no outgoing dependencies
really is a fact about the symbol itself.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* test: replace assertions that cannot fail

Four from review, each satisfied by the defect it was meant to catch.

`new Set(props).size === 2` over two different literal strings can only ever
be 2, so it could not detect the node merge its title promises — that is a
difference in COUNT, now asserted on the raw array.

The ambiguity test asserted only an empty edge set, which is satisfied equally
by "the gate fired" and "the name was never looked up". It now also requires
the ambiguity counter to have moved.

`Interface|Property` was listed as a structural-pair sentinel beside
`TypeAlias|Property`, but both its labels are in the SCOPE_BRIDGE cross-product
so the pair is generated by construction and the sentinel cannot fail. Dropped
rather than left reading as coverage; `TypeAlias|Property` is the load-bearing
one.

`TypeAlias|Method` was declared in the schema with no fixture emitting it — a
declared pair no emitter exercises is indistinguishable from a missing one
until an analyze aborts on a real repo. Adds a method-shaped alias member, and
the suite requires sentinels to actually appear, so it is not vacuous.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* docs: document the new incomplete reason, the UNKNOWN verdict and the id churn

Review found the code changes landed without the guidance around them, and an
agent following this repo's own rules would have been told the wrong thing.

`graph-write-collapsed` joined `INDEX_INCOMPLETE_REASONS` with no Sign block
and no recovery section, while the precedent it cites
(`embedding-checkpoint-pending`) has both — so `gitnexus status` would surface a
new string naming silent wrong answers with nothing explaining trigger or
remedy. Added to RUNBOOK and GUARDRAILS, including why this reason alone also
fails the exit code.

`AGENTS.md` said MUST warn on HIGH or CRITICAL and never mentioned UNKNOWN, and
the shipped impact skill's risk table had no UNKNOWN row and still implied
few-callers ⇒ LOW. An agent obeying those rules literally sees `risk: UNKNOWN`
and proceeds, which negates the change the verdict exists to make. Both copies
of both skills updated.

`MIGRATION.md` now records that process ids do not survive this release —
positional ids plus depth-first tracing, source-order siblings and round-robin
selection mean `proc_7_handle` is a different flow afterwards. Bounded honestly:
nothing in-repo joins on a raw process id, so it is index churn, not a broken
consumer.

`ARCHITECTURE.md`'s scope-resolution stage list gains the two new stages.
The guide skill's node list gains `Property` and `TypeAlias` — the two node
types this work most prominently creates.

Also, on the pair-CSV preflight review asked to confirm: the hard abort IS
deliberate, because a fallback recovering zero rows is the confident-empty
failure this work targets. But the transient the message itself names — a second
concurrent analyze sharing `.gitnexus/csv` — is a race, so the check now
re-looks three times over ~150ms before declaring the file gone. Long enough to
ride out a rename, far too short to mask a file that is genuinely missing.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* fix: drop redundant TypeAlias pairs and keep bare identifiers off class members

Two regressions the full suite caught after the review fixes, both real.

`schema-pair-coverage` failed with eleven hand-declared pairs that a rule now
generates. Adding `TypeAlias` to `LINKABLE_LABELS` — needed so
`resolveDefGraphId` can bridge an alias def to its node — also makes it a
SCOPE_BRIDGE source and target, so the cross-product produces `File|TypeAlias`,
`TypeAlias|Property` and nine others that round 1 had declared by hand. Removed;
the invariant is that no pair is both generated and hand-declared.

This also changes what the structural-pair sentinel means, and the comment is
corrected rather than left overstating it: `TypeAlias|Property` is no longer
load-bearing because the label is off the generated grid — it is load-bearing
because it now depends on `TypeAlias` being IN `LINKABLE_LABELS`. Remove it and
the pair stops being generated while the hand declaration is gone, which is the
same state that silently breaks alias consumer edges.

`block-scope-shadowing` failed because a bare identifier resolved to a class
`Property`. `class Box { baseUrl = '...'; pick() { const baseUrl = ...; return
baseUrl; } }` linked the block-local read to `Box.baseUrl`, duplicating the
legitimate `this.baseUrl` edge. A bare identifier is not a member access: with
no receiver there is no object whose property it could be, and in JS/TS a field
read needs `this.`. Receiver-less read/write sites no longer accept `Property`
hits; callables stay reachable, so `cb = save` naming a top-level function is
unaffected.

That defect PREDATES this branch's TypeScript captures — JavaScript has emitted
bare-identifier reads since A2 and no class fixture exercised the shadow. The
TS parity added here is what surfaced it.

Golden snapshot regenerated after verifying the drift line by line: exactly
+5 USES from type annotations in the mini-repo, every pre-existing count
unchanged, so nothing was rewired.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* perf(scope-resolution): share the property-name index across language passes

Review follow-up. `indexPropertyNodesByName` scanned every node in the graph
and was rebuilt inside each qualifying language pass, reintroducing exactly the
pattern `phase.ts` hoisted out for `sharedNodeLookup` — whose comment records
why it matters: "the previous per-language rebuild burned that CPU+heap N times
and, on a huge repo, a tiny language's full-graph copy overlapped the next
language's — a real contributor to the scope-resolution memory peak."

Built once in `phase.ts` beside `sharedNodeLookup` and `sharedFnNodeIndex`, and
threaded through the same `prebuilt*` seam, so tests and isolated calls still
build their own.

Sharing is only safe because the per-language restriction MOVED rather than
disappeared: the shared index is whole-graph, and candidates are filtered to
the language's own files at lookup time. That also fixes a subtlety the
per-language build had backwards — the cap now applies to the FILTERED set, so
a name carried by forty properties across a polyglot monorepo but only two in
the language being resolved is still answerable, where a global cap would have
refused it.

The tri-state at the lookup boundary is deliberate and the three outcomes are
not interchangeable: no property of this name in this language (nothing to say,
and NOT an ambiguity), too many to choose between (reportable), or a list to
narrow.

Caught mid-change by the polyglot fixture: an intermediate state shared the
index without moving the filter, and the cross-language edge came straight
back. That test earning its keep twice is the reason it exists.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* feat(scope-resolution): report when a field's only anchor is another language

Round 3, found OUT-OF-SAMPLE — six field names appearing in no prior report, so
nothing here was tuned against them. All six answered 0 backend ACCESSES while
their definitions sat in `apps/research-dashboard/**`: TypeScript only. The
in-sample set scored 5/5 and the out-of-sample set 0/6, and the gap is entirely
this.

Per-language inference (`3c5eadc7`) is right and stays. What was wrong is that
declining is INVISIBLE: an empty result for a field anchored only in TypeScript
is byte-identical to an empty result for a field nobody reads. One says "look
in the other language or grep"; the other says "delete it". That is the same
confident-empty failure this series exists to remove, one surface over — and
this time the missing fact is about the ANALYZER's reach rather than the code.

Declines are now counted and named, with the languages the anchors actually
live in, kept SEPARATE from ambiguity because the remedies differ: ambiguity
wants better receiver typing, this wants an anchor in the reading language.
Collapsing them would tell a reader the wrong thing to do. A non-zero count
warns at analyze time regardless of dev mode.

The facts are published as `PipelineResult.propertyInference`, which they had
to be for any of this to be testable — and that exposed a second defect. The
round-2 ambiguity assertion, which I told the reviewer of #2856 I had
strengthened, read its stat off a `scopeResolution` field that does not exist
on PipelineResult: the `if (undefined) return` guard swallowed it and the test
passed with the production code deleted. Both that assertion and the new ones
now read the published field, and the guard is an assertion rather than an
escape. Verified by deleting the counter and watching them fail.

Reported by the same round-3 method note that caught it: verifying a fix
against the cases it was written for only proves those cases pass.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* feat(context): explain an empty property result caused by a cross-language anchor

The other half of R3-1. The analyze pass now knows which fields it declined to
link because every definition of the name lives in another language; this puts
that fact where it is actually read.

`context()` on such a field previously returned an incoming list byte-identical
to a genuinely unread field. The two demand opposite actions — "look in the
other language, or grep" versus "delete it" — so the difference has to travel
with the answer:

  unresolved: property reads of this name were NOT linked: every definition of
              it is typescript, and name inference does not cross languages.
              An empty or short incoming list here is not evidence the field is
              unused — confirm with a text search, or give it an anchor in the
              reading language.
  anchorLanguages: ['typescript']

Carried through repo meta because the graph cannot answer it: the unlinked
reads mint no edge and no node, so the only record is the pass that declined
them.

Keyed on the NAME, not on the resolved label. Gating on `=== 'Property'` was
tried first and is wrong — the label reads `''` on this path for a plain
Property node, so the gate silently suppressed the entire feature while every
test still passed. Caught by asserting the field is DEFINED rather than
guarding on it, which is the same anti-pattern that made two earlier
assertions vacuous. The meta list only ever contains property names, so
matching the name is itself the type check.

Cached per (index, indexedAt): `ensureInitialized` deliberately avoids a
per-call `loadMeta` because every tool routes through it, so this re-reads
exactly when a re-analyze could have changed the answer and never otherwise.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* feat(scope-resolution): report declined property reads for opt-out languages too

Generalizing R3-1 rather than waiting for it to be re-reported in the other
direction. The reported case was a JavaScript read whose only anchor was
TypeScript; the mirror — a TypeScript read anchored only in JavaScript — was
still silent, because a language that sets `fieldFallbackOnMethodLookup: false`
had the whole pass skipped, and skipping emission also skipped REPORTING.

Detection is not inference. Counting what could not be linked asserts nothing
about what it means, so `reportOnly` runs the pass for its facts while emitting
no edge, and the opt-out keeps protecting exactly what it protected before.

Two things this turned up that a single-instance fix would have missed:

The cross-language fixture could NOT prove `reportOnly` is load-bearing — the
per-language candidate filter already blocks those edges, so the assertion
passed with the flag forced off. The case that discriminates is a SAME-language
TypeScript read that name inference could legitimately link and the opt-out
forbids; forcing the flag off there emits `readsTsOnly -> tsOnlyBudget`, which
is the violation.

Getting to that case surfaced a sibling gap, recorded but NOT fixed here: the
object-literal `Property` rule is JavaScript-only, so `const CONFIG = { ... }`
in a `.ts` file mints no node and its keys are invisible. The first draft of
this fixture used exactly that shape and could not discriminate for that reason.
It is the TypeScript half of R2-1a and wants its own change, not a rider on
this one.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* feat(typescript): index object-literal keys, as JavaScript already did

The sibling recorded in `0c5a4f64` and deliberately left out of it. Both the
named object-literal rule (A1/A5) and the identity-wrapper rule (R2-1a) lived
only in JAVASCRIPT_QUERIES, so the single most common config idiom in
TypeScript —

    export const tsRuntimeConfig = { tsConfigRetries: 3 };

— minted no node for any key. `context()` answered "Symbol not found" and a
precise read through the holding variable had nothing to resolve to.

TypeScript sets `fieldFallbackOnMethodLookup: false`, so these gain no
name-based inference. What they gain is the PRECISE path, which is the route
TypeScript is meant to use: `tsRuntimeConfig.tsConfigRetries` has a typeable
receiver and now resolves. A read through an untyped receiver stays unresolved
and, since `0c5a4f64`, is reported as such rather than answering an empty set.

Scoped exactly as the JavaScript rules are — bound to a variable, and for the
wrapper only the three functions that return the argument they were given —
with the same `Object.entries` negative control pinning the allowlist.

Found by fixture, not by report: the first draft of the `reportOnly` test used
a TS `const CONFIG = { ... }` as its discriminator and could not discriminate,
because the shape mints nothing. That is the whole argument for sweeping a
class instead of waiting for each instance to be filed.

SCHEMA_BUMP 47 -> 48: parse-time, so a warm cache replays ParsedFiles carrying
none of these matches and the keys stay invisible.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* feat(scope-resolution): anchor anonymous returned object literals to their function

The last gap round 3 named, and the dominant shape in idiomatic JS: 437
`return {` sites in a single backend directory of the reporting repo, including
the ~25-field payload of its entire signal pipeline. The literal binds to
nothing, so its keys could not even be named — "who reads wickRatio?" had no
symbol to ask about.

The enclosing FUNCTION is the owner: the literal is that function's return
shape, a contract its callers consume. Keys qualify as `<function>.<key>`, so
two functions returning the same name stay two shapes rather than one merged
symbol, and multiple returns in one function stay distinct by position.

RECONCILING THIS WITH R2-1b, which deliberately modelled returned keys as WRITES
to avoid adding same-named competitors to narrowing. These are definitions, but
narrowing now ranks DECLARED anchors — named literals, class fields, interface
and alias members — strictly above return shapes. A name that already resolved
keeps resolving to what it resolved to before, so the competitor problem R2-1b
was avoiding cannot come back. Mutation-checked: dropping that ranking breaks
five pre-existing R2 resolutions.

That also required an R2-1b assertion to change, and the change is a
strengthening rather than a concession. It asserted `toHaveLength(1)` — no new
definition — as a proxy for "adding definitions must not move an existing
answer". The proxy is now false while the property still holds, so the property
itself is asserted directly.

No `HAS_PROPERTY` edge from the function: that would be a `Function|Property`
relation pair the schema does not declare, and an undeclared pair does not
degrade — it throws and kills the whole analyze. That already shipped once in
this PR.

Two things found by dumping rather than assuming, both fixed here:

SHORTHAND keys were not matched at all. `return { symbol, interval, score }` is
the commonest spelling and the reporting repo's own payload is mostly this form,
but tree-sitter models it as `shorthand_property_identifier`, which `(pair)`
does not match. Caught by dumping the golden fixture and seeing a literal
returning `{ level, message, timestamp: Date.now() }` had indexed only
`timestamp`. Now covered in return position AND in the variable-bound rule,
which had the same gap.

Provenance was flagged by owner-presence, which mislabelled the anonymous case:
a callback's return shape yields no name to qualify by, so it looked like a
DECLARED anchor and would have outranked real declarations. Flagged by position
now — a different question from whether a name could be derived.

SCHEMA_BUMP 48 -> 49. Within one PR the version only has to differ from main's,
but a build stamped 48 was installed and used to analyze before these captures
existed, so caches stamped 48 carry none of them — the intermediate-build hazard
this ledger already records for 33/34.

Golden regenerated after verifying the drift: exactly +10 Property and +10
DEFINES, every pre-existing count unchanged.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* fix(scope-resolution): rank production anchors above test fixtures

Found by testing R3-4 on the reporting repo instead of on its fixtures. Anchoring
returned literals took `wickRatio` from 6 definitions to 13 — and backend reads
still resolved to nothing, because SEVEN of the new JavaScript anchors compete
and four of them are in `tests/`. A test constructs throwaway shapes carrying
production field names; a read in shipped code cannot mean one of them.

Applied before the declared/return-shape split, because "is this the shipped
program" is the stronger signal — a declaration inside a test fixture is still a
test fixture. Skipped when the READER is itself a test, since a read there
legitimately means the test's own shape.

The first version of this test was vacuous and the mutation check caught it: the
reader sat in the same file as the production anchor, so the same-file tier
resolved it whether or not this tier existed. The reader now lives in a file
that imports neither anchor, which leaves production-vs-test as the only thing
that can decide.

Honest about what this does NOT do: it narrows `wickRatio` from seven candidates
to three, and three functions in different files each returning that field is
GENUINELY ambiguous — refusing is correct, and the ambiguity is now counted and
named rather than silent. The reported question ("who reads wickRatio?") is
answerable only where one producer exists; where several do, the honest answer
is the list of producers, which R3-4 made nameable for the first time.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* feat(scope-resolution): resolve members through a call result's return shape

The question three rounds of reports could not answer, and the one narrowing
must refuse by design: a field produced by SEVERAL functions. A read of
`spike.wickRatio` could mean any producer, so name inference correctly declines
and no amount of tier-tuning changes that. It needs evidence, not inference.

The evidence existed in two halves that had never been joined. The call-result
type binding (`const alert = formatSpikeAlert(row)` binds `alert` to a TypeRef
whose rawName is the callee) predates all of this work; it simply had nothing to
resolve to when the callee returned an anonymous literal, because an anonymous
literal named nothing. R3-4 gave it a name. Joining them:

    const alert = formatSpikeAlert(row);
    alert.wickRatio   ->   Property:...:formatSpikeAlert.wickRatio

Precise, at ordinary emission confidence, and it works EXACTLY where narrowing
cannot: several producers sharing a field name stop being competitors because
the receiver says which one. Runs before the name fallback and claims its sites,
so a precise answer is never second-guessed by a name match.

Measured on the reporting repo: 1,410 precise edges, and all six fields round 3
verified OUT-OF-SAMPLE go from 0 backend readers to 7, 11, 10, 7, 6 and 14.
Round 3 scored 0/6 on that set; this is 6/6.

The bound is asserted, not just documented: a read off a BARE PARAMETER has no
binding here, because typing it needs the caller's type to flow in — that is
inter-procedural and genuinely larger. Those reads still fall through to name
inference and are still reported when it declines. The fixture has two producers
sharing a field name precisely so the test cannot pass by name matching, and
mutation-checking the owner lookup fails it.

No SCHEMA_BUMP: this is scope resolution, not parse-time capture, so a warm
cache already carries everything it reads. Noted in the ledger because the
reflex on this branch has been to bump, and an unnecessary bump costs every user
a full re-parse.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* Revert "return-shape anchoring" (R3-4/R3-5): it degrades query

Reverts af5eec5c, c764847a and 4f93f32e. The capability was real and measured —
all six fields round 3 verified OUT-OF-SAMPLE went from 0 backend readers to
7/11/10/7/6/14, 0/6 to 6/6, via 1,410 precise return-shape edges. It is reverted
anyway, because it costs more than it buys in its current form.

`cli-limit-e2e` caught it. Bisected to af5eec5c: on the mini-repo fixture,
`query('message')` returned two processes before and NONE after. The mechanism
is not window displacement — that hypothesis was tested with a partition that
kept function-local property keys from taking window slots, and it changed
nothing. Indexing the keys of every returned literal adds many nodes whose names
are ordinary words, which moves the BM25 CORPUS statistics: "message" gets less
discriminating, and `createLogEntry` — the callable that actually carries the
processes — stops ranking at all. A corpus-level effect is not repairable by a
tie-break.

Trading a regression in `query`, one of the core tools, for coverage in
`context` is the wrong trade, and shipping it because the number was good would
be the same mistake this PR spent three rounds removing: a confident answer that
is worse than the honest one.

What the work established, and what re-landing needs:

  - The mechanism is right. Joining the existing call-result type binding to a
    named return shape resolves `alert.wickRatio` by EVIDENCE, which is why it
    succeeds exactly where name inference must refuse.
  - The cost is search dilution, and it needs to be measured on BM25 ranking
    BEFORE the capture lands — not discovered by a downstream e2e test.
  - The likely shape of the fix is keeping return-shape keys out of the text
    search corpus while keeping them in the graph, which needs persisted
    provenance rather than the in-memory flag used here.

Kept: everything through 8972d223, which is verified green.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* feat(search): give the index a notion of DETAIL symbols, and re-land R3-4/R3-5

Reverts the revert. The return-shape work was correct and measured — 1,410
precise edges, and all six fields round 3 verified out-of-sample going 0/6 to
6/6 — and it was dropped for a regression that was really a MISSING LAYER: the
search index had no way to say "this symbol is queryable but is not a concept a
text search should surface on its own".

Indexing the keys of anonymous returned literals adds many nodes whose names are
ordinary words (`message`, `value`, `timestamp`). Without that notion they
compete on equal terms in FTS, push the CALLABLES named after the same concept
past the search's row cap, and `query('message')` returned two processes before
and none after.

The layer, rather than a workaround:

  - `Property.isDetail`, persisted. A Property-only column, which that table
    already precedents with `declaredType`, set where the key is minted.
  - `buildFtsQueryCypher` filters on it for the Property table, BEFORE the row
    cap. That placement is the whole point: rows crowded out never reach the
    caller, so no downstream re-ranking can recover them. Two downstream fixes
    were tried first — a tie-break and a partition of the merge window — and
    recovered nothing, which is what located the real seam.
  - `IS NULL`-tolerant, so an index written before the column existed still
    answers instead of returning nothing.

Verified by the A/B that found the regression: the query's result order is now
byte-identical to the pre-R3-4 baseline —
`proc_0_processrequest, proc_2_errormiddleware, Function:createLogEntry,
Property:LogEntry.message` — with the return-shape coverage retained.

The determinism guard then caught prose in the new DDL comment containing the
token this repo scans for, which would have read as an unordered query. Reworded;
that suite is doing exactly its job.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* feat(processes): let a flow end where the program reaches outward

The item three rounds kept circling. A trace was only emitted at a node with NO
outgoing calls, so a real flow — scan, score, arm, PLACE THE ORDER — is always a
PREFIX of some longer chain that runs on into date helpers, and could never be a
process in its own right. Ranking could not fix that; the flow was never a
candidate to rank.

What blocked it was signal granularity, and the fix is the layer that was
missing rather than a heuristic. GitNexus already knew where the program reaches
outward: the parse phase collects fetch calls and ORM queries carrying
`filePath` + `lineNumber`. Those facts only ever produced FILE-level edges
(`File -[FETCHES]-> Route`), which cannot end a trace — every function in a file
containing one would qualify. Attributing each site to the function whose range
CONTAINS it turns the same facts into the function-level signal the walk needs:
no new extraction, no new relation pair, no schema change. Innermost wins, so a
closure that performs the call is the sink rather than the function spanning it.

Three touch points, and the second is the one that makes or breaks it:

  - the walk emits at a sink AND CONTINUES, so `placeOrder` is an endpoint while
    `placeOrder -> formatDate` still exists separately;
  - subset-removal PRESERVES sink-terminated traces. A sink flow is by
    definition a prefix of the chain that runs past it, so emitting one at the
    walk and deleting it one step later would have been a no-op. Mutation-
    checked: removing this preservation fails all three sink tests, including
    the one asserting the sink is reached at all;
  - selection ranks sink-terminated above leaf-terminated, then by depth.

`processes` now declares `parse` as a dependency. It historically avoided that
on the grounds the dependency was spurious for a progress counter — it is no
longer spurious, so it is declared rather than reached for implicitly, and the
read fails open so a pipeline without that output detects no sinks instead of
losing every process.

Bounded honestly: this fires where fetch/ORM extraction fires. On the reporting
repo it will do nothing until route detection handles hand-rolled dispatchers,
since that codebase routes with `pathname === '/api/...'` on raw node:http and
produces zero Route nodes — a separate gap, and the next one worth closing.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* docs(processes): the comment above the sink ranking still described it as unreachable

R3-6 taught the walk what a sink is, but the block explaining the ranking still
carried the paragraph written when that was out of reach — "a business flow
still cannot be a process in its own right ... fixing that means teaching the
walk what a sink is" — sitting directly above the code that does exactly that.
A reader arriving at `rankedByInterest` would take the limitation as current.

The measured-false fan-in finding stays; it is still true and still worth not
re-deriving. What replaces the stale half is the bound that IS current: sinks
fire where fetch/ORM extraction fires, so a codebase whose outward calls are not
detected as such still sees leaf-terminated traces only.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* feat(routes): read a route that is declared by a comparison, not by a framework

`route_map` on the reporting repo returned

    {"routes": [], "total": 0, "message": "No routes found in this project."}

for a codebase with SEVENTEEN route modules, an `apiRouteTable.js`, and 113
path comparisons. Not a partial answer — a statement about the code, and a
false one. Same confident-empty class as the rest of this branch, except here
it takes out a whole tool.

Four route-discovery paths existed — filesystem convention, single-file
framework route, cross-file framework route, decorator — and every one of them
needs a FRAMEWORK to declare the route. A raw `node:http` server declares it
the only way the language offers:

    if (req.method === 'GET' && pathname === '/api/live/portfolio') { … }

A path, a verb, and a handler. Nothing in the pipeline could read it.

The failure modes are not symmetric, so the rules are weighted accordingly: a
route this misses is a coverage limit, a route it invents is `route_map`
asserting something false. A comparison therefore qualifies only against a
demonstrable request path (`pathname`, `*.pathname`, `req.url`; `path` is
excluded — in Node it is overwhelmingly `node:path` or a file location), and
anything untranslatable is dropped rather than approximated:

  - `pathname.startsWith('/api/')` is a namespace test; minting `/api` would
    claim a route nobody serves;
  - a bare `pathname === '/'` with no verb is more often the static-file
    normalisation branch (`pathname === '/' ? '/index.html' : pathname`) than a
    route — WITH a verb the intent is unambiguous, so that form IS taken;
  - an anchored regex converts only when its body is a literal path plus
    single-segment wildcards, so `/^\/api\/research-runs\/[^/]+$/` becomes
    `/api/research-runs/{param1}` while an optional group or an alternation
    bails.

Three things went in that nobody reported, each found by measuring rather than
by a second report.

`switch (pathname) { case '/api/x': }` is the same dispatch in different
syntax, and waiting for a bug report per shape is how a graph stays permanently
one idiom behind the code it indexes.

The reconciliation had to move up a level. The reporting repo keeps its path
table (`isKnownApiPath`) in one module and its handlers in sixteen others, so a
per-file rule sees each half separately and lists every route twice — once
verb-less with the table as its "handler", once properly. Measured: 22 of the
first 94 routes were that shadow. Only the whole registry can tell them apart,
so the rule lives in the routes phase and touches dispatch-guard routes only —
a framework route without a verb is method-agnostic BY DECLARATION (a Django
function view, a Laravel resource), a fact rather than a weaker observation.

And a path composed from a constant needed folding. One of those seventeen
modules writes every one of its routes as `` `${autoTradeBasePath}/rules` ``,
where the base is an alias of a module-level literal. Refusing that lost the
whole file — and lost it INVISIBLY, since a module with unfoldable paths and a
module with no routes are the same empty answer. Same-file only, literals only,
one alias hop, and it refuses on ambiguity: a name declared twice with
different values is dropped rather than guessed, because a partially-folded
path is a wrong route and a wrong route is the failure this module exists to
avoid.

Wiring is a LanguageProvider hook, not a language check in shared code.
`extractDecoratorRoutes` was already the general "route from this file's own
AST" channel rather than a decorator-only one — express routes have flowed
through it as `decorator-express.get` for a while — so the transport, the
`(method, url)` dedup and the handler-symbol resolution all apply unchanged.
`ExtractedDecoratorRoute.source` carries the one thing that genuinely differs:
a decorator route is DECLARED, a dispatch-guard route is INFERRED. The walk is
gated behind a substring pre-filter so it costs nothing on files that cannot
produce a route, and the gate is sound by construction — every rule reaches a
route only through `isPathExpression`, which needs one of exactly those tokens.

SCHEMA_BUMP 49 -> 51, two entries. Decorator routes are worker output carried
in the parse cache, so a warm cache replays results predating the extractor and
`route_map` stays empty — the symptom this fixes, wearing the mask of "the
extractor does not work". The second bump is the v34 hazard tripping again: a
build stamped 50 had already been used to analyze before folding existed, so
caches stamped 50 carry the unfolded route set. Caught by measuring — the
post-folding run came back suspiciously fast and would have reported the
pre-folding number.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* fix(scope-resolution): ask whether a value def is FUNCTION-LOCAL, not whether it is module-level

The locality filter for value references was written as an ALLOWLIST of
module-scope defs, and that shape cannot express a class member. A value def has
three homes, not two: module level, a function body, and a CLASS body. Java and
C# fields and Python class attributes live in the third, so an allowlist keyed on
"module level" excludes every one of them by construction.

The guard written to make that safe could not fire either. The set arms whenever
a Module scope is FOUND, and Java has module scopes while having no module-level
values at all — so for Java it armed permanently empty, which is exactly the
state the guard exists to distinguish from "there genuinely are none".

Inverting it removes the class. A blocklist of defs positively identified as
function-local fails safe: a Java field, a Python class attribute, or a language
whose scopes could not be inspected is emitted rather than dropped. That also
retires the arming flag — an empty blocklist and an uninspected one mean the same
thing, and both mean "emit". The failure mode moves from "silently deletes an
edge class" to "retains an inert local", which is the right direction for a tool
whose stated principle is that a confident empty answer is the worst outcome.

MEASURED, because the review that prompted this reported it as a P0 deleting
every Java/C#/Python field ACCESSES edge, and that half does not reproduce.
Instrumenting the bridge over `java-write-access` shows ZERO value-ACCESSES
candidates reaching the filter: Java field references resolve to a `Property`
target and `isValueDefinitionLabel` covers only Const/Static/Variable, so the
filter is never consulted there. Pipeline-level edge sets are byte-identical with
the filter forced on and forced off, across four shapes — Java cross-file field
writes, Java cross-file constant reads, Java bare same-class constant reads, and
a Python module-constant/class-attribute mix. The defect is real and latent; the
blast radius is not. Fixed anyway, because the predicate asks the wrong question
and the next change that makes the bridge the sole emitter would ship the
deletion for real.

New `value-ref-locality.test.ts` pins the invariant triple — local dropped,
module-scope kept, class member kept — by TARGET rather than by `reason`. The
per-language suites filter on `rel.reason === 'read'|'write'` while the bridge
stamps `scope-resolution: read|write`, so they are blind to bridge-side change in
both directions. The file states plainly which half gates the mechanism (JS,
mutation-verified) and which gates only the outcome (Java, because the mechanism
is unreachable there), so it cannot be mistaken for a stronger gate than it is.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* fix(docs): restore the agent guidance a generated-block refresh deleted

Commit 8f8261021's message is entirely about cross-language anchor reporting; it
also regenerated the `gitnexus:start` block in AGENTS.md and CLAUDE.md against a
LOCAL, non-PDG index and swept six documentation/config files along with it. The
review caught this and it is correct. Restored:

  - the index stats, which regressed 248612 symbols / 565510 relationships /
    918 flows -> 29969 / 118986 / 762 — my machine's index described as the
    project's;
  - the whole `pdg_query` bullet and the PDG half of the impact bullet, while
    both capabilities remain live in `mcp/tools.ts` and `local-backend.ts`;
  - the "Inline staleness signal" section in the guide skill, content that never
    left `origin/main` and that this branch had no reason to touch;
  - `.mcp.json`, which had moved from `npx -y gitnexus@latest mcp` to a bare
    `gitnexus` — a fresh clone with no global install gets a dead MCP server.

The worst of it is self-inflicted in a specific way worth naming: commit
411cac9b9, four hours earlier on this same branch, ADDED the instruction telling
agents not to read `risk: UNKNOWN` as an all-clear. The refresh deleted it. So
the branch shipped a new UNKNOWN verdict and simultaneously removed the guidance
for reading it — the exact false-safe this PR exists to remove, reintroduced one
layer up in the docs.

Re-applied that guidance, and found the drift is wider than reported. The review
noted the `.claude/` copy contradicting the plugin mirror; in fact the UNKNOWN
block was present in ONE of five shipped distributions. `gitnexus/skills/` (the
npm package), `gitnexus-cursor-integration/`, and `.agents/` were missing it too,
so every non-Claude consumer of this skill had the old table.

`shipped-skills-sync.test.ts` passed 54/54 through all of that. Its byte-identical
check covers only the plan/work/review/lfg family, and the standard skills are
guarded solely by per-skill fragment lists — so a fragment nobody listed is a
fragment nothing protects. Added the UNKNOWN fragments to that list, plus a
`copies.length > 1` assertion so an empty copy list cannot make the loop vacuous.
Verified it fails against the pre-fix tree.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* fix(scope-resolution): require the return-shape producer to RESOLVE, not merely to name-match

Review finding 2, reached independently by three Claude lanes and two Codex
legs, and reproduced here. `emitReturnShapeMemberAccesses` took the receiver's
type binding, then filtered a WHOLE-GRAPH property index with `idNamesMember` —
a textual match on the node id. Any node whose id happened to read
`<producer>.<member>` qualified, in any file and any language, and it emitted at
the 0.9 PRECISE tier where a `minConfidence` floor cannot filter it out. The
sibling unique-name pass was given a per-language restriction for exactly this
hazard; this pass consumed the same shared index with none.

Three guards, catching different shapes:

  - the producer must RESOLVE to a definition (`findCallableBindingInScope` — a
    CALLABLE lookup: the producer is the function whose return shape owns the
    member, and it resolves through finalized import bindings so a producer in
    another file still yields its own file);
  - the member must live in that definition's file;
  - that file must belong to the language being resolved.

The third is not redundant with the second, which is the part worth recording.
A receiver typed by CONSTRUCTION (`const bound = new Loyalty()`) resolves through
the shared class registry, which is polyglot — so the producer resolves into
`Loyalty.java`, its members legitimately live in that same file, and file
equality waves the cross-language edge straight through.

Also fixes the sibling P2: a site where the receiver IS typed to a producer that
owns no such member now claims the site. That branch is the strongest negative
evidence the pipeline can produce, and letting it fall through meant the 0.5 name
fallback answered a question the precise pass had just DISPROVED — measured,
linking a read to an unrelated same-named key in another file.

`polyglot-property-isolation` gains the bound-receiver arm the review asked for,
and it is the right arm: the pre-existing case has an untyped receiver and so
only ever exercised the unique-name pass, while one extra token routes an
identical read through this one. Mutation-verified — restoring the pre-fix
matching makes exactly the new leak assertion fail. The first version of that arm
was silently vacuous (it introduced a JS key of the same name, which destroyed
the fixture's Java-only premise), which is why it now asserts on the TARGET FILE
rather than on the absence of a name.

KNOWN LIMIT, stated rather than papered over: a member-call producer
(`const r = svc.make()`) binds `svc.make`, which resolves to no callable, so this
pass now declines it. Codex B3 raised that converse case and it is real. Fixing
it means typing `svc` and then finding `make` on that type — a larger piece of
work, queued for the follow-up PR. Declining is the correct interim behaviour:
the alternative is matching `make.<member>` by name across the graph, which is
the fabrication this commit removes.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* fix(scope-resolution): resolve the import map by point lookup so the seal cannot empty it

Review finding 4, reproduced end-to-end by two lanes: the same commit and the
same repo produced a DIFFERENT graph depending on `GITNEXUS_DISK_SCOPE_INDEX`.

`buildDirectImportMap` built `scopeToFile` by walking `parsed.scopes`. The
out-of-core seal replaces `emitParsedFiles` with a scope-STRIPPED copy — that is
its documented contract, scopes are reachable only via `scopeTree.getScope`
afterwards — so under the seal the map came out empty, every `directImports`
lookup returned undefined, and tier-2 narrowing died repo-wide.

The reporting is the worse half. The loss surfaced as `ambiguous`, which means
"several candidates and the pass refused to choose". The truth was "the evidence
was discarded one function earlier". A reader acting on that would go looking for
better receiver typing to fix a problem that was not there.

This is the SECOND consumer of `parsed.scopes` on this branch to hit the seal.
The first was hoisted above it. This one is converted to the point lookup
instead, which is the stronger fix: a point lookup survives the seal by contract,
so there is no ordering left for a future edit to get wrong.

The parity assertion that would have caught it now exists. The sealed harness in
`javascript-const-references` already ran the fixture both ways, but every
assertion in it pinned ONE field's readers — which is exactly how a second
instance slipped in, since no assertion happened to cover a narrowed name. It now
also compares the WHOLE ACCESSES edge set between the two runs, as a sorted diff
so a failure names the edges that moved, with a non-empty guard so two empty sets
cannot compare equal and assert nothing. Mutation-verified: forcing the map empty
fails it.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* fix(scope-resolution): bind a producer's own returned key to itself, and stop claiming uniqueness for a ranked answer

Review finding 3, accepting the two defects it demonstrates and declining the
remedy it proposes. Both halves are mutation-verified.

1. A SITE INSIDE ITS OWN RETURN SHAPE NOW BINDS TO ITS OWN KEY.

   `export function buildB(row) { return { tickIntervalMs: row.b } }` writes the
   key that IS `buildB.tickIntervalMs`. Ranking declared anchors above return
   shapes is correct for a READ through a receiver, but applied to this site it
   handed the write to a same-named module const that `buildB` never touches —
   a wrong edge — while the node the key actually defines was left with no
   writer at all. Both halves wrong from one rule applied to the wrong shape.

   Checked before every other rule, because it is evidence rather than ranking:
   the owner qualifier on the candidate id and the enclosing callable are the
   same symbol. Nothing outranks that.

2. THE TIER NO LONGER LIES.

   `workspace-unique` is a claim that exactly one node in the workspace carries
   the name — a fact about the graph, and the label a reader trusts most. An
   answer reached by FILTERING (tests down-ranked, return shapes down-ranked)
   is a weaker claim, and it was reported under the same label. The edge is
   unchanged; what it is allowed to say about itself is not. `narrowed` now
   counts these correctly too, since it keys off the tier.

WHAT I AM NOT DOING, and why. The review proposes dropping the same-file and
imported-file tiers "and keeping only genuine workspace-uniqueness". That would
revert the measured R2 result taking backend readers of `exitMinAtrMult` from
0 to 24. Workspace uniqueness was already measured too strict on that repo: the
field carries 26 Property definitions — 16 in one-off scripts, 7 in the
frontend, one in a test, and exactly one in the backend that reads it. Strict
uniqueness declines all 24.

The alternative suggestion — require the receiver to bind to the owning object —
has the same effect by another route: the population this pass exists for is the
untyped option bag, whose receiver binds to nothing. Requiring a binding turns
the pass off for its own use case. So the two demonstrated defects are fixed and
the capability around them is kept, at half confidence, naming its inference in
the reason string, and honoured only where `fieldFallbackOnMethodLookup` allows.

The R3-5 precision test needed rescoping rather than relaxing: it asserted that
EVERY edge to the contested field is a precise return-shape edge, which the
producer's own (correct, name-tier) write now violates. It asserts the reader
edges are precise and the producer's write binds to its own key — two different
claims reached two different ways, which is what the code now models.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* test(bench): re-baseline the JS/TS scope-capture fingerprints for this branch's capture additions

The `Cross-language scope-capture fingerprint + scaling guards` CI step was
failing on TypeScript and JavaScript, and it had been failing for the whole PR —
the branch changed both SCOPE queries without ever updating the guard's
baseline. It only surfaced now because a merge conflict had prevented CI from
running at all, so nothing reported it.

Re-baselined per the file's own instruction ("re-baseline intentionally on a
legitimate capture change"), and verified first rather than rubber-stamped. The
capture-name sets in both scope queries, diffed against `origin/main`:

  TypeScript  + @reference.read.identifier      (A2, bare-identifier reads)
              + @reference.type                 (R2-2, type references)
  JavaScript  + @reference.read.identifier      (A2)
              + @reference.read.destructured    (R2-1c)
              + @reference.write.property-key   (R2-1b)

Nothing removed on either side. A pure superset is the check that no EXISTING
capture moved — which is the failure mode a fingerprint guard exists to catch,
and the reason to look before regenerating.

Consistent everywhere else too: `capture_groups_small`/`_large` are unchanged
(4503/14403) because those measure the SYNTHETIC scaling source this branch does
not touch, so only the fixture-corpus number moves — 2097 -> 2338 across 21 new
lang-resolution fixtures, 146 -> 151 files. Scaling stayed linear and inside
budget (typescript 1.116, javascript 1.010, both < 1.5), so the added rules cost
no super-linear time. Prior and new hashes are recorded in the baseline note, as
every previous entry in that file does.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* test(bench): re-baseline the receiver-resolution drop guard for the new WRITE site kind

Second of the two bench guards that had been failing for the whole PR without
anyone seeing it — CI could not run while the branch was conflicted, so both
went unreported until the merge cleared.

The drift is a new site KIND, not a movement in an existing one:

    totalDropsAllKinds  129 -> 140
    bySiteKind          {call: 102, read: 27}
                     -> {call: 102, read: 27, write: 11}

`call` and `read` are byte-identical, which is the check that matters. This
branch added write-site captures the corpus never had — `@reference.write.
property-key` (R2-1b record construction) and the destructured-read rules — so
write sites reach receiver resolution for the first time, and 11 of them have a
receiver that does not resolve. A drop is the honest outcome for those; the
alternative is the name-inferred guess this series spent three rounds bounding.

Verified it is NOT caused by this session's review fixes before re-baselining:
removing the `memberNotOnShape` site-claim added in 69047086 and re-running gives
the identical 129 -> 140 / write: 11 drift, so the movement predates today and
belongs to the capture work, exactly as the arithmetic above says.

The sibling `scope-emission` guard still PASSES untouched, and the fingerprint
guard passes after 20a937f4 — so all three arms of the benchmarks job are green
locally.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* fix(routes): track boolean polarity in dispatch guards, so a negated condition cannot invent a route

Reproduced exactly as reported. `dispatch-guard.ts` refuses to inherit a verb
from an `if` whose `else` branch holds the comparison — the module's own doc
comment explains why: that branch runs precisely when the condition did NOT
hold, so attributing it is backwards. `!` is the same fact written as an
operator, and it was not handled. A stated invariant with half an
implementation, which is worse than an absent one, because the comment reads as
though it were covered.

Measured against the real extractor before fixing:

    if (!(pathname === '/api/admin'))                  ->  '' /api/admin   INVENTED
    if (!(req.method === 'GET') && pathname === '/x')  ->  GET /x          INVERTED
    if (!(req.method === 'POST' && pathname === '/w')) ->  POST /w         BOTH

And the review is right that this is not additive-only. Driven through the real
pipeline with a policy module that serves nothing plus a one-line route table,
the invented `GET /api/report` collected into `verbedUrls` and
`reconcileDispatchGuardRoutes` then EVICTED the true verb-less route for that
path. A false route deleted a real one. After the fix that repo yields exactly
one route, verb-less, path intact.

Parity, not presence: `!!x` is `x`, so counting negations and testing the parity
is the only rule that keeps a doubly-negated guard working. A negated VERB drops
to verb-less rather than dropping the route — `!(method === 'GET')` means every
method except GET, which no single value expresses, while the path evidence is
untouched. Applies to the regex arm too; `!/^\/api\/x$/.test(pathname)` had the
identical hole.

Deliberately NOT keeping the `statement_block` break from the suggested patch.
It is unreachable — the `!` in `if (!cond) { … }` lives in the condition, a
SIBLING of the block, never an ancestor of anything inside it, and the only
shape that puts a `!` above a block is an IIFE, which the function-boundary stop
catches first. Unreachable in the UNSAFE direction, too: breaking early
under-counts negations, and an under-count reads a negated guard as positive and
invents the route. Verified by mutation — with the break present, deleting it
fails nothing; the other three guards each fail a test when removed.

Six new cases, all previously absent (`grep -c '!(' ` over both test files was 0,
and the only negation covered was `!==`, the form that already worked).

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* test(bench): re-baseline the emit-persistence byte-identity fingerprint for the isDetail column

The third bench guard this branch left red, and the one the earlier
rebaseline pass missed: the `benchmarks (GITNEXUS_BENCH)` job has never
succeeded once in eleven attempts, and since step 11 aborts the job, the
two steps after it — the streaming PDG-emit guard and the cross-language
pipeline benchmarks — have never executed at all.

    [emit-persistence --check] FAIL: byte-identity fingerprint drift
      (got 4ee15e74…, expected 69e9182a…)

Cause is this branch's own `isDetail` BOOLEAN on the Property table
(PROPERTY_SCHEMA), which `streamAllCSVsToDisk` writes as one more header
field and one more cell per Property row.

Verified header-only rather than regenerated on faith. Dumping every CSV
the bench emits on both `origin/main` and this branch and diffing them
per file (name, byte length, sha256): the file set is identical at 35
CSVs, 34 of the 35 are byte-identical, and the sole difference is
property.csv growing 68 -> 77 bytes as the header gains `,isDetail`. The
synthetic graph mints no Property nodes, so not one data row moved —
which is the thing this fingerprint exists to catch. Both timing gates
were green throughout (scaling_ratio 0.783 against a 1.8 budget,
elapsed_ms_large 229ms against the 1000ms backstop), so no throughput
claim is being rebaselined away.

Justification recorded in a `_rebaselined_<reason>` key, the convention
bench/scope-capture/baselines.json already sets, and the note now says so
explicitly so the next regeneration records its reasoning too.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01BCptYZWRgnnJ821rzebQyj

* perf(processes): build each trace key once, not once per comparison

`deduplicateTraces` held its `join('->')` inside the `some()` callback, so
every already-kept trace had its key rebuilt from scratch against every
candidate: O(T*U) joins of O(depth * id-length) characters. The
allocation, not the substring scan, is what the pass spends its time on.

Nothing about breadth-first search made that safe. It only hid the cost by
keeping traces short — measured on this repo the walk averaged 4.3 steps
before D1 and 9.4 after, which roughly doubles both the number of
surviving traces and the length of every key, so the same quadratic that
was affordable under BFS is about six times the work under DFS. That is
the whole of the slowdown D1 was carrying; the depth-first walk itself is
cheaper than the queue it replaced (`pop()` against an O(frontier)
`shift()`), and its frontier is bounded by depth rather than by breadth.

Hoisting the join into a `uniqueKeys` array removes the multiplication.
Measured back to back on one host, 5 reps, 25k callables, production sink
path (main -> this branch before -> this branch after):

    deep_chain      876.8ms -> 1233.1ms -> 101.9ms
    mixed_cycles    731.4ms -> 1130.6ms -> 132.8ms
    shallow_wide    572.5ms ->  531.8ms ->  49.6ms

and on the real gitnexus/src corpus (11,490 symbols) process detection
goes 204ms -> 89ms against main, having been slower than main before.

Output is unchanged, which is the property that matters here: swapping the
file back and forth and diffing every non-timing field across all sixteen
shape x scale x sink-variant configurations gives no difference, and the
real corpus returns the same 936 processes / 4,648 steps either way. Sink
keys are pushed alongside the traces they belong to, so the comparison set
is the same set it always was.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01BCptYZWRgnnJ821rzebQyj

* fix(processes): type the parse-output read as ParseOutput

The R3-6 sink read declared its own structural shape for the parse output
instead of naming `ParseOutput`, which made it the only one of the five
parse consumers in the repo not bound to the real type — cross-file.ts,
orm.ts, routes.ts and tools.ts all pass the type argument.

`getPhaseOutput` is a raw `as T` cast, so a local shape checks nothing at
runtime and only severs the compile-time link: renaming `allFetchCalls` on
`ParseOutput` would still compile here and silently detect zero sinks
forever. Verified with a real `tsc --noEmit --strict` run over exactly that
rename — the typed consumers error, this one did not. The runtime `.filter`
stays, since it is the only thing actually guarding the cast.

Also brings the phase docblock back in line with the deps array, which was
missing `structure` (pre-existing) and `parse` (added by this branch), and
records the two parse fields the phase now reads.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01BCptYZWRgnnJ821rzebQyj

---------

Co-authored-by: Claude Opus 5 (1M context) <noreply@anthropic.com>
Co-authored-by: Gergő Magyar <gergomagyar@icloud.com>
Co-authored-by: Gergo Magyar <gergomagyar0@gmail.com>
2026-08-08 09:58:14 +01:00
Gergő Magyar
911151e230
fix(resolution): resolve Go pointer-receiver calls, and report the program boundary instead of hedging (#2766) (#2782)
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2026-08-01 22:42:18 +01:00
MyShining
1147646518
feat(spring): model AOP transactions, caching, and security (#2783)
* feat(spring): model AOP advice and proxy behavior

* fix(spring): address AOP review findings

---------

Co-authored-by: Shining <xuenning@qiyi.com>
2026-08-01 17:22:12 +01:00
azizur100389
84f584449d
fix(python): resolve classes through module imports (#2770) 2026-08-01 06:02:47 +01:00
MyShining
de84ad6297
feat(spring): index @Bean factories and @Resource injection (#2740)
* feat(spring): index Bean factories and Resource injection

* fix(spring): address Bean and Resource review findings

* refactor(lbug): keep relation pair parsing in router

* test(lbug): preserve schema exports in WAL mocks

* test(cache): align schema bump pin

---------

Co-authored-by: Shining <xuenning@qiyi.com>
Co-authored-by: Gergo Magyar <gergomagyar0@gmail.com>
2026-07-31 10:33:42 +01:00
Gergő Magyar
27ab37c432
feat(resolution): type receiver chains from AST structure across all 14 languages (#2708) + epistemic lower-bound (#2744) (#2747) 2026-07-31 07:12:57 +01:00
Gergő Magyar
ed8ab1c246
fix(scope-resolution): resolve callable reference flows (#2437) (#2522)
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* docs(plans): add provider-hook value-refs plan (#2437)

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* docs(plans): deepen #2437 plan to USES + property-dispatch design

Design revised after prior-art research (Kythe ref vs ref/call, Joern
METHOD_REF, Feldthaus field-based call graphs, CodeQL impliedReceiverStep):
registration sites emit reference-class USES, invocation is recovered by a
field-based property-dispatch pass synthesizing CALLS at member-call sites.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* feat(scope-resolution): model provider-hook value references (#2437)

Functions referenced as object-literal property values (provider hooks like
emitScopeCaptures: emitCppScopeCaptures) previously produced no edge at all,
so impact/context reported a false-safe 0 upstream dependents.

Two coordinated halves, per prior art (Kythe ref vs ref/call, Joern
METHOD_REF, Feldthaus ICSE'13 field-based call graphs, CodeQL
impliedReceiverStep):

- Registration -> USES: new ReferenceKind 'value-ref'; TS/JS queries capture
  pair values and shorthand properties (with @reference.property-key);
  emitted as a reference-class USES edge, reason 'scope-resolution:
  value-ref'. Resolution is callable-gated so plain values emit nothing.
- Dispatch -> CALLS: new shared pass emitPropertyDispatchCalls synthesizes
  CALLS (reason 'property-dispatch', confidence 0.7, per-key fan-out cap 32
  calibrated on this repo's 16-provider hook tables) from member-call sites
  to every function registered under the same property key.

Deviation from plan: the pass owns value-ref resolution entirely via the
post-finalize findCallableBindingInScope walker — the shared registries only
see pre-finalize local bindings, so imported hooks (the c-cpp.ts case) were
unresolvable through lookupForSite; Reference.propertyKey passthrough
dropped as unnecessary.

SCHEMA_BUMP 13 -> 14: ParsedFile gains value-ref sites + propertyKey.

Verified end-to-end: impact(emitCppScopeCaptures, upstream) now reports 8
impacted / HIGH with extractParsedFile (true dispatch caller) at d=1 via
property-dispatch and the c-cpp.ts registration via USES.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* test(scope-resolution): cover value-ref registration and property dispatch (#2437)

Integration: same-file/cross-file/aliased/shorthand registrations emit USES;
non-callable and destructuring values emit nothing; dispatch sites gain
property-dispatch CALLS (incl. JS twins and per-language partitioning);
fan-out-capped keys are dropped entirely; factory-call values unchanged.
Unit: capture-shape pins for @reference.value-ref + @reference.property-key.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* fix(scope-resolution): surface dropped property-dispatch keys in stats (#2437)

Review finding: skippedKeys was returned but discarded — a hook table
larger than the fan-out cap silently reopened the #2437 gap for those
keys. Log dropped keys and fold value-ref USES + dispatch CALLS into
referenceEdgesEmitted.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* docs(plans): add callable reference-flow implementation plan

* fix(scope-resolution): close property-dispatch review gaps

* feat(scope-resolution): add callable flow facts

* feat(scope-resolution): resolve callable value flow

* feat(scope-resolution): resolve callable references across providers

* fix: harden callable reference flow resolution

* fix(scope-resolution): preserve callable binding semantics

* docs(plans): add pr-2522-review-fixes plan

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* fix(storage): bump INCREMENTAL_SCHEMA_VERSION for callable-value-flow edges

Callable-value-flow CALLS/USES edges (#2437) can connect two files whose
content did not change, but the incremental write set only covers changed
files — a top-up against a pre-v7 index would silently omit the new edges
for every unchanged file pair, indefinitely. Force the one-time full
re-analyze (review finding 1, #2522).

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* fix(storage): sanitize callable-flow sites per-site at load, log drops

The load-time validator rejected the WHOLE ParsedFile when one site was
malformed or over-bound, with no logging — and C++ legitimately emits
empty-string parameterTypes entries ('' = unknown, the
ReferenceSite.argumentTypes convention) for cv-only/ERROR-recovered types,
so real repos fell into a permanent, silent warm-cache-miss reparse loop
through the #1983-sensitive main-thread path (review finding 7, #2522).

Now: '' entries are valid in type arrays; a malformed/over-bound site drops
only itself (counted, warned once per load); only non-array garbage —
evidence the serialization itself is untrustworthy — rejects the file.
Deviation from plan §6 wording: validator-side tolerance replaces emit-side
clamps — smaller diff, same asymmetry closed at the single chokepoint.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* fix(scope-resolution): keep declarations in the union for reassigned callable cells

The binding-lookup suppression for fact-constrained cells was wholesale:
reassigning a declared function through its own name (greet = other;
greet()) deferred the call to the solver, which then refused the lexical
lookup that resolves the declaration — an unresolvable RHS yielded zero
CALLS for a call that resolved pre-flow (review finding 8, #2522).

Suppression now applies only to cells bound by FORMAL facts — its actual
purpose (a parameter whose grammar emits no declaration binding must not
adopt a same-named outer function). Copy/alias/store/load destinations keep
their declaration as an inclusion seed (Andersen-style union).

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* fix(scope-resolution): count forfeited deferred sites in the budget-bailout warning

On work-budget exhaustion the deferred invoke sites end the run with zero
CALLS — free-call fallback and reference emission already skipped them —
but the warning said 'ordinary graph emission remains untouched', which is
false for exactly those sites. The warning context now carries the
unresolved deferred-site count and the comment states the real cost
(review finding: budget-bailout honesty, #2522).

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* feat(scope-resolution): surface dropped property-dispatch keys in stats and warn payload

The over-cap warning carried only a count; the dropped key NAMES were
discarded and RunScopeResolutionStats had no field, so the PR-body claim
'includes them in resolver statistics' was unimplemented (review finding,
#2522; reviewer ask on the fan-out cap). The warn payload now names up to
20 dropped keys and the stats carry propertyDispatchSkippedKeys.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* refactor(scope-resolution): drop producer-less ownerQualifiedName from formal sites

No capture emitter anywhere produces @callable-flow.owner-qualified-name —
the solver branch consuming it was unreachable in production, yet the field
was typed, parsed, validated, and unit-tested with hand-built input (review
finding 16, #2522; YAGNI). Re-add with a real producer if C++ qualified
member declarators ever need it.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* refactor(scope-resolution): drop dead callable-flow knobs

CallableFlowPassingMode 'callable-object' had no producer and no consumer
distinguishing it, and CallableFlowCaptureOptions.extractCallArguments had
no language providing it (unlike its live sibling extractCallCallee) —
review finding 17, #2522 (YAGNI). The invocation-kind 'callable-object'
is a different, live concept and stays.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* fix(ingestion): bind subscripted callable cells to the container, not the index

terminalIdentifier iterates children in reverse, so tbl[i] = handler seeded
the INDEX variable's cell (polluting a same-named formal) and tbl[i](7)
looked up the callee under i in a different scope — no join, no CALLS edge
for the classic function-pointer-array dispatch (review finding 12, #2522).
Subscript nodes now recurse into their container field only, in both
bindingIdentifier and terminalIdentifier, across the fielded grammars
(C/C++/JS/TS/Python/Go/Java).

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* fix(ingestion): make cross-function file-scope callable bindings resolvable

Two stacked gaps killed the canonical C callback-registration pattern
(fp assigned in init(), called in run()) — the exact #2437 false-safe this
PR exists to fix (review finding H1, #2522):

1. isVisibleValueBinding only consulted assignment regions and formals, so
   a call in a function OTHER than the assigning one emitted no invoke
   fact. A declared callable-typed binding is now a value binding wherever
   its declaration is visible (visibleCallableSignature).
2. The C scope query had no @declaration.variable pattern for function-
   pointer declarators — void (*fp)(int); created no scope-tree binding,
   so the seed (init) and invoke (run) cells canonicalized to different
   keys and never joined. Both bare and initialized forms now bind.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* fix(c): detect variadic parameters via the named variadic_parameter node

tree-sitter-c materializes '...' as a named variadic_parameter node; the
anonymous-token checks never matched, so variadic function-pointer
signatures were emitted with a wrong fixed arity and no '...' sentinel
(review finding, #2522). C++ is unaffected ('...' stays an anonymous token
there); the token checks remain for such grammars.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* fix(ingestion): emit invoke facts for field-stored callable member calls

The C ops-vtable pattern (o->run = handler; o->run(1)) captured the store
but never the call — the member path in emitCallFacts bailed for languages
without protocol methods, and the value-binding index recorded the member
store under the OBJECT's name ('o'), not the member's ('run') (review
finding 11/M3, #2522). Member destinations now also record their terminal
member name, and a member call whose name-cell has a visible store emits an
indirect invoke — gated on the store so plain accessor calls (map.get)
stay inert.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* fix(cpp): disambiguate (obj->*ptr)() ERROR recovery by token order

tree-sitter-cpp groups the recovered '->*' two ways depending on
error-recovery cost (identifier lengths): [identifier, ERROR '->*m'] or
[ERROR 'obj->*', identifier]. The recovery assumed the first shape, so the
second silently swapped receiver/member and dropped the call site — the
committed test passed only by name luck (review finding H2, #2522). The
identifier's position relative to '->*' inside the ERROR now decides roles.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* fix(cpp): class members are never file-local in hasFileLocalCallableLinkage

The name-keyed file-local set is populated from every static declaration,
so an in-class 'static void make();' (external linkage — in-class static
means no-instance) and any member sharing a name with a static free
function were over-marked, refusing legitimate cross-file
declaration/definition joins (review finding 13/M2, #2522). Method and
Constructor defs now bypass the name-set, per the hook's own linkage-only
contract.

Deviation from plan step 13: the regression is a unit-level contract pin
rather than an end-to-end join test — C++ merges out-of-line member
definitions onto the member node by qualified identity, so the graph shape
cannot discriminate the join refusal for members.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* fix(cpp): classify parameter passing mode from the declarator chain only

A whole-subtree scan for reference_declarator inverted copy vs alias:
void reg(void (*cb)(int& out)) marked the by-value pointer cb as
'reference' because of the NESTED parameter's int&, making the solver
back-propagate formal targets into every caller's argument cell — alias
semantics for a copy (review finding 14/M5, #2522). The chain walk never
descends into nested parameter lists; a reference anywhere ON the chain
(int& x, void (*&cb)(int)) still aliases.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* fix(ruby): bare identifiers are calls, not callable references

Ruby parses a receiver-less zero-arg method call identically to a variable
read, so 'action = process' — which CALLS process and stores its return —
seeded action with the callable and minted a wrong CALLS edge from any
dispatch through it, confirmed end-to-end (review finding 15/HIGH, #2522).
New provider knob bareNamesAreCalls: a bare name that is not a provably
local value binding and not an explicit reference form (method(:x),
lambda/proc) emits no flow fact, on both the assignment and argument paths.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* fix(go): pair multi-value := positionally instead of cross-wiring

The shared field fallback took the FIRST LHS identifier and the LAST RHS
identifier of Go's expression_list pair, cross-wiring 'a, b := f, g' and
synthesizing a garbage comma-joined qualified name — the real relationships
were silently dropped (review finding 16, #2522). extractAssignment may now
return multiple pairs; Go pairs list entries positionally and emits nothing
for a length mismatch (multi-return call RHS).

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* fix(java): drop get/test from callableProtocolMethods

'get' and 'test' collide with ubiquitous non-functional-interface APIs
(Map/List/Optional/Future.get), so every ordinary container access emitted
a spurious callable-object invoke fact — high-volume misleading graph facts
with a cross-wiring risk on receiver-name reuse (review finding 17, #2522).
Supplier.get/Predicate.test dispatch is deliberately traded away until the
check can gate on the receiver's declared type.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* fix(rust): pin the qualified-name no-degrade guard as a hard invariant

Rust's scoped_identifier callable-reference capture over-includes unit enum
variants and associated constants (Shape::Square seeds as if callable);
they stay edge-free only because resolveSeedCandidates refuses to degrade
an unresolved qualified name to a simple-name lookup (review finding 18,
#2522). Capture-side type filtering would false-negative on tuple-variant
constructors, so the guard IS the contract: documented as a hard invariant
(Go's mis-shaped multi-value forms also rely on it) and pinned end-to-end.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* fix(php): remove nonexistent optional_parameter node type

tree-sitter-php has no 'optional_parameter' — defaults ride on
simple_parameter — so the entry was dead weight the #1920 literal gate
does not cover for capture-option Sets (review finding 19, #2522).

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* fix(cobol): detect procedure pointers on fixed-format sources

Two stacked defects made the feature a no-op on classic sequence-numbered
fixed format (review finding 20/H3, #2522):
1. parseDataItemClauses' USAGE alternation knew POINTER but not
   PROCEDURE-POINTER/FUNCTION-POINTER, so the dataItems filter was dead.
2. The raw-line fallback scanned UNCLEANED text, where the sequence number
   satisfied the leading digits and the LEVEL NUMBER got captured as the
   pointer name. It now scans preprocessed lines and requires a letter-
   initial name (COBOL data names must contain a letter).
161 COBOL preprocessor/copy-expander tests stay green; free-format matrix
case unchanged.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* fix(cobol): skip comment lines in SET seed/copy scans

A commented-out SET (indicator-column '*'/'/' or free-format '*>')
produced a live seed and a false CALLS edge from dead code (review
finding 21/M1, #2522). The scan now skips indicator-column comment lines
and strips inline '*>' tails before matching.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* docs(architecture): document callable-flow-only mode and skipped-key reporting

The Callable-value flow section omitted scopeResolutionEdgeMode:
'callable-flow-only' — a real emit-pipeline branch that suppresses all
ordinary emission for standalone providers (review finding 22, #2522) —
and predated the skipped-key names/stats surfacing.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* docs(scope-resolution): correct value-ref resolution attribution and stale pdg-gating comments

The value-ref contract comment claimed MethodRegistry resolution — the
mechanism is the post-finalize findCallableBindingInScope walker owned by
emitPropertyDispatchCalls (resolveReferenceSites skips these sites). Three
'only under --pdg' calleeIdSink comments were falsified by the #2437 gating
change (callee-id-sink.ts's header was updated; these copies were missed).
Review finding 23, #2522.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* test(ingestion): direct unit coverage for synthesizeCallableFlowCaptures

The 1,100-line shared synthesizer had no test naming it — only downstream
consumers were covered (review finding 24, #2522). Pins seed/invoke/
formal/argument emission, subscript container binding, store-gated member
invokes, produced-value guards, and the bareNamesAreCalls knob over a
minimal options object so assertions target the synthesizer's own
semantics.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* test(resolvers): deepen shallow-language coverage; fix Kotlin/Swift reassignment gaps it exposed

Adds the COBOL SET x TO y copy-branch scenario and conditional-assignment
scenarios for Kotlin, C#, Swift, and Dart (10 languages previously had one
generic case each — review finding 25, #2522). The new scenarios exposed
two real capture gaps, fixed here:
- tree-sitter-kotlin's 'assignment' node is fieldless, so nested
  reassignments (chosen = ::target inside a block) produced no flow facts;
  Kotlin's extractAssignment now decomposes it positionally.
- tree-sitter-swift fields its assignment as target:/result:, neither in
  the shared fallback's field lists; both added.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* test(infra): literal-validation gate for callable-capture option Sets

The #1920 gate validates query literals and exported configs but not the
module-private *_CALLABLE_CAPTURE_OPTIONS Sets consumed by the shared
synthesizer — a typo'd node type silently captures nothing (PHP shipped a
dead 'optional_parameter'; review finding 26, #2522). Every <key>NodeTypes
Set literal is now validated against its language's grammar; name-carrying
sets (callableProtocolMethods, memberPointerOperators) are deliberately
outside the contract.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* test(storage): centralize corrupt-fixture casts into makeStoreEntry

The callable-flow store tests scattered 'as unknown as' double-casts per
fixture (review finding 27, #2522; standing no-as-any rule). One typed
helper now owns the single controlled escape hatch for building malformed
serialization-boundary payloads.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* chore(bench): refresh capture fingerprints after review fixes

python-scope: the committed baseline (8d5c3699) never matched this
branch's code — CI's benchmarks arm was red on the PR head (review
finding 2/HIGH, #2522); regenerated (a99e69ab), scaling 1.04 in budget.
scope-capture: ruby/cpp/swift/java/kotlin drifted from the review-fix
commits (bare-name suppression, passing modes + ->* recovery, assignment
fields, protocol narrowing, positional assignment); all 14 languages
re-verified PASS with ratios <= 1.18 against the 1.5 budget.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* chore(docs): untrack docs/plans working documents

docs/ is gitignored (local working docs); the plan files were force-added
past the ignore. Untracked from the index only — they stay on disk.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* test(golden): regenerate captures goldens after callable-flow review fixes

The per-language digest guards (csharp/go/php/python/ruby/rust/swift)
locked the pre-fix capture output; the review-fix series intentionally
changed it — store-gated member invokes, subscript container binding,
Ruby bare-name suppression, Swift assignment fields, positional pairing.
Regenerated with UPDATE_GOLDEN=1; clean verification run 59/59; all other
parity/golden guards (pipeline-graph, spring-route, python parity) pass
untouched at 33/33.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* fix(ingestion): prototypes are callees, not callable value cells

The cross-function visibility fix indexed EVERY signature-bearing
declaration as a value binding — including plain function/method
prototypes (void f(int);). Every call to a declared function then became
an indirect invoke, and with emitCanonicalInvokeReference (C/C++) minted a
free-call reference that resolved through the registry, bypassing the
precise passes' two-phase/ambiguity/subobject suppression — eight phantom
CALLS edges in the cpp resolver suite on CI.

Only declarations whose binding identifier sits under a pointer/
parenthesized declarator (callable-typed variables like void (*fp)(int);)
create value cells now. cpp resolver suite 331/331; callable-value-flow +
C/C++ suites 181/181 (the cross-function fp regression still passes); cpp
fingerprint rebaselined, both bench gates PASS.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

---------

Co-authored-by: Claude Fable 5 <noreply@anthropic.com>
2026-07-17 17:20:02 +01:00
Gergő Magyar
df1fc36094
fix: make large incremental writebacks commit reliably (#2409) (#2425) 2026-07-10 14:05:23 +01:00
Livio Gamassia
d546fa3cce
fix(storage): rename index metadata to gitnexus.json with dual-write compatibility (#2363) 2026-07-03 19:32:59 +01:00
ChunxueLi
1029a8ddd7
feat: add Spring DI resolver for @Autowired List<T> injection (#2200)
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* feat: add Spring DI resolver for @Autowired List<T> injection

Addresses all P0/P1 findings from tri-review (#2200):
- P0: Register INJECTS in RelationshipType union (compiles)
- P0: Rewrite execute() to emit consumer→implementation edges from graph data only
- P1: Register in VALID_RELATION_TYPES, single-pass O(N) indexes
- P1: Java-only gate with early exit on non-Java repos
- P1: Update FULL_ORDER golden test
- 8 unit tests covering all edge cases

* test: make VALID_RELATION_TYPES size assertion array-driven (no hardcoded count)

The security test hardcoded toBe(16) for the relation type count, but PR #2200
added INJECTS, bumping it to 17. Replace the magic number with an
EXPECTED_RELATION_TYPES array whose .length drives the size assertion,
so future additions only need to append to the list.

Fixes CI failure on PR #2200.

* fix(ingestion): thread raw generic field types onto Property nodes so Spring DI matching works (review 4616076037 P0)

Production declaredType is generics-stripped by design (extractSimpleTypeName:
List<Shape> -> "List"), so the spring-di phase's anchored regexes could never
match real extraction output — the phase was a silent no-op on every real Java
repository, while its unit tests passed against hand-built node shapes.

Add FieldInfo.rawDeclaredType captured verbatim from the field's type node
(.text, generics and qualifiers preserved — same precedent as the JVM method
extractor), thread it through both parse-worker Property sites, add it to the
shared NodeProperties contract, and match on rawDeclaredType ONLY (no
declaredType fallback: it can never match real data and would mask future
plumbing regressions as quiet no-ops).

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* fix(ingestion): gate Spring DI on real injection annotations, honest edge reason (review 4616076037 P1)

Extract Java field annotations (shared extractAnnotations helper, moved
verbatim from the method extractor) onto Property nodes and require
@Autowired or @Inject before a collection field becomes an INJECTS
candidate. Previously every edge's reason string fabricated "@Autowired"
without any annotation ever being checked, and any plain collection field
would have fanned out false edges once matching worked.

@Resource is deliberately excluded: JSR-250 resolves by bean name first
(defaulting to the field name), injecting a single named collection bean —
the opposite of the collect-all-implementers fan-out INJECTS models. Pinned
by a test.

An annotated candidate missing rawDeclaredType now logs an isDev warning
(plumbing-contract breach signal) instead of vanishing silently.

SCHEMA_BUMP 9 -> 10: Property nodes gained rawDeclaredType + annotations;
warm parse caches must invalidate or the DI phase silently no-ops on
replayed pre-upgrade nodes (the #2038 trap).

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* refactor(ingestion): framework-neutral di phase + language-scoped Spring matcher registry (review 4616076037 P1)

spring-di was the only pipeline phase naming a language in shared
core/ingestion code (DoD.md language rule; the maintainer's direction is a
generic DI solution). Split it:

- di-extractors/spring.ts: the Spring matcher (annotation gate, collection
  type parse, @Resource exclusion rationale, framework-specific reason
  payload) — language-scoped home, mirroring route-extractors/.
- di-extractors/index.ts: DI_MATCHERS, a single-valued
  ReadonlyMap<SupportedLanguages, DiFieldMatcher> mirroring the
  SCOPE_RESOLVERS registry shape sanctioned by AGENTS.md. Constructor
  injection deliberately out of scope; widen to arrays only when a second
  same-language framework lands.
- pipeline-phases/di.ts (renamed from spring-di.ts): framework-neutral —
  routes Property nodes to registered matchers by node language via a typed
  guard, then runs the unchanged reverse-index fan-out. Zero language or
  framework names remain (grep-verified).

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* fix(ingestion): language- and qualified-name-scoped interface resolution for DI fan-out (review 4616076037 P2)

The interface index was built from ALL Interface nodes regardless of
language, keyed by bare simple name with last-writer-wins overwrite —
a polyglot repo with a TS and a Java 'Shape' could fan Java INJECTS edges
into TypeScript classes, and two same-named Java interfaces in different
packages silently collapsed to whichever parsed last (documented GitNexus
bug class: #2054, PR #1956).

Resolution is now per-language with qualifiedName as the primary key
(Interface nodes already carry package-qualified qualifiedName); dotted
element types resolve via qualifiedName, bare names via a per-language
simple-name index that records ambiguity and fails CLOSED. Ambiguity skips
are observable: DIOutput.ambiguousSkipped + an aggregated isDev debug log,
so 'no DI fields' is distinguishable from 'all candidates ambiguous'.
Same-package tiebreaking is a pinned, documented follow-up.

Order-independence pinned by running collision tests in both insertion
orders.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* fix(ingestion): depth-aware Spring collection-type parser for idiomatic generics (review 4616076037 P3)

The two anchored regexes silently skipped idiomatic Spring shapes:
Map<Pair<A,B>, IFoo> (nested-generic key broke the [^,]+ split),
List<? extends IFoo> / List<? super IFoo> (bounded wildcards),
java.util.List<IFoo> (qualified wrapper), and whitespace/multi-line
declarations.

Replace them with a small scanner: whitespace normalization, wrapper
matched by last dotted segment, depth-aware top-level-comma split, wildcard
bound stripping, and a final plain-dotted-type-name gate so anything else
(nested-generic elements, arrays, unbounded wildcards, embedded comments,
unbalanced brackets) fails closed. Every accept and reject is documented in
the module docstring and pinned by 27 table-driven cases.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* test(integration): prove Spring DI end-to-end through the real pipeline (review 4616076037 P1)

Both no-op incarnations of this feature shipped with a green unit suite
because every test hand-built the exact graph shape the phase expected —
no test ever ran real Java source through the actual extraction pipeline.

Add test/integration/spring-di-pipeline.test.ts: real .java fixtures via
runPipelineFromRepo, pinning (a) the extraction contract on the annotated
field's Property node (declaredType 'List', rawDeclaredType 'List<IFoo>',
annotations ['@Autowired']), (b) set-equality on ALL INJECTS edges
(exactly Consumer->FooA and Consumer->FooB; the non-annotated 'plain'
field of the same type contributes nothing; no self-edges), and (c) a
negative-control fixture with no injection annotations producing zero
INJECTS edges. Either historical regression fails at least one of these.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* fix(incremental): register INJECTS across product surfaces + delete-before-writeback (review 4616076037 P2)

INJECTS was allowlisted in VALID_RELATION_TYPES but invisible or unhandled
everywhere else. Register it deliberately:

- REL_TYPES (gitnexus-shared schema-constants): web-side validRelType()
  otherwise silently rejects INJECTS filters (CLI/web single source of truth).
- mcp/tools.ts cypher edge list (agent-facing schema discovery).
- isGraphWideRelType: INJECTS validity is a whole-program property — a
  change to a THIRD file (the interface, or a new/removed implementer)
  creates/invalidates edges between two untouched files (the TAINT_PATH /
  #2084 M4 U6 class), so incremental extraction must always re-include the
  full fresh set.
- deleteAllInjects (lbug-adapter): mirrors deleteAllInterprocTaintPaths —
  COUNT-then-DELETE under withConnLock, benign missing-table carve-out,
  re-throw otherwise (CodeRelation has no PK and there is no read-side
  dedup; a fail-soft delete + re-add would silently duplicate rows).
- run-analyze.ts: the delete is UNCONDITIONAL, next to the Communities
  delete — deliberately NOT inside the options.pdg block: the di phase runs
  on every persisting analyze while the graph-wide re-include is
  unconditional, so a pdg-gated delete would append without deleting on
  every non-pdg incremental run (N runs = N copies).
- local-backend.ts comment: opt-in traversal by design (not in default
  impact()/context() lists; no IMPACT_RELATION_CONFIDENCE entry per the
  WRAPS/FETCHES precedent — edges carry their own 0.8).
- ARCHITECTURE.md: 14 -> 15 phases, DAG diagram, phase table, skip-list.

Note: the tools.ts edge list also predates WRAPS/QUERIES/USES — that drift
is pre-existing and left for a follow-up.

Idempotency pinned end-to-end: two successive incremental runs (real
runFullAnalysis + real LadybugDB, unrelated-file touches) leave the INJECTS
row count stable.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* docs: describe INJECTS' actual precondition; drop stale fixed-at-16 comments (review 4616076037 P3)

The shared-schema doc for INJECTS claimed an @Autowired precondition the
code (pre-fix) never checked, and hardwired Spring semantics into what is
now a framework-neutral edge type. Reword: precondition is an injection
annotation recognized by a per-language matcher in di-extractors/;
framework specifics live in the reason payload, not the type contract.

security.test.ts comments still said the allow-list size 'stays fixed at
16' (it is 17 and the assertion derives from EXPECTED_RELATION_TYPES).

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* refactor: simplify DI surfaces — narrow matcher contract, dedup delete-alls, derive tools edge list

Post-implementation simplification pass (4 review angles):

- DiFieldMatch/CandidateField carried collectionType + matchedAnnotation
  that no consumer read (the matcher bakes both into reason) — narrowed to
  {elementTypeName, reason}.
- parseElementTypeName had two guard branches fully subsumed by the final
  plain-dotted-type-name gate — deleted, rationale folded into the regex
  comment.
- The three byte-identical delete-all-by-rel-type functions in lbug-adapter
  (TAINT_PATH / CALL_SUMMARY / INJECTS) are now one parameterized helper +
  thin wrappers with identical names, signatures, and message text
  (character-diff verified) — the missing-table regex and abort policy now
  live in exactly one place.
- The cypher tool's hand-maintained edge-type list (already missing
  WRAPS/QUERIES/USES) is now derived from the canonical REL_TYPES — the
  drift class is gone rather than patched.
- di phase: interface indexes are built only for languages that actually
  have candidates; test builder gained a rawDeclaredType opt-out replacing
  a hand-rolled node.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* fix: apply Tier-2 review findings — qualified-name fail-closed, honest cypher docs, pinned delete contract, hook isolation

- byQualifiedName was last-writer-wins on duplicate qualified names
  (reproduced: order-dependent INJECTS edges with ambiguousSkipped 0 —
  same package+interface duplicated across monorepo modules/source roots;
  Java qualifiedName has no file-path component). Both indexes now share
  the AMBIGUOUS fail-closed sentinel; order-flip test added.
- The REL_TYPES-derived cypher edge list advertised pdg-gated types with
  no caveat (LLM queries on them silently return zero rows on default
  indexes) — caveat appended, INJECTS example added, impact relationTypes
  description now names the DI fan-out opt-in.
- The delete-all re-throw contract (only defense against duplicate
  CodeRelation rows) was untested — error classification extracted to a
  pure classifyDeleteAllError and pinned exhaustively.
- extractRawType/extractAnnotations hooks lacked the per-hook try/catch
  the pipeline applies elsewhere (#2286 pattern): a throwing hook would
  silently drop every remaining file in the language group. Hardened,
  degradation tested.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

---------

Co-authored-by: Gergő Magyar <gergomagyar@icloud.com>
Co-authored-by: Claude Fable 5 <noreply@anthropic.com>
2026-07-02 17:49:46 +01:00
Semianchuk Vitalii
6ef173fc51
fix: consolidate icon imports, fix stale refs and package name collision (#2343)
* fix: consolidate icon imports, fix stale refs and package name collision

three components were importing directly from lucide-react instead of
going through the centralized @/lib/lucide-icons module like the rest
of the codebase. added the missing Keyboard and BarChart2 exports to
the icons module and updated the imports.

also:
- removed duplicate mermaid init comment in ProcessFlowModal
- replaced placeholder issue #XXX with a descriptive note in git.ts
- updated stale KuzuDB reference to LadybugDB in ARCHITECTURE.md
- renamed gitnexus-web package.json name from "gitnexus" to "gitnexus-web"
  to avoid collision with the CLI package

* fix: complete package rename in lockfile and cite #2054 in git.ts comment

Address tri-review findings: package-lock.json name fields (top-level and
packages[""]) now match the renamed gitnexus-web package, and the
getCanonicalRemote doc comment cites #2054 instead of dropping the issue
reference.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* chore(autofix): apply prettier + eslint fixes via /autofix command

---------

Co-authored-by: Gergő Magyar <gergomagyar@icloud.com>
Co-authored-by: Claude Fable 5 <noreply@anthropic.com>
Co-authored-by: github-actions[bot] <41898282+github-actions[bot]@users.noreply.github.com>
2026-07-02 11:01:12 +01:00
Gergő Magyar
8886d55008
feat(ingestion): make doc comments searchable across all languages (#2286)
* feat(ingestion): add shared leading-doc-comment description extractor (#2270)

Add `extractLeadingDocComment` plus a language-neutral
`createLeadingDocDescriptionExtractor` factory and a shared
`DOC_BEARING_LABELS` set to `utils/ast-helpers.ts`. The helper pulls the
normalized text of a leading doc comment off a definition node's preceding
named sibling, covering both block doc comments (Javadoc/KDoc/JSDoc/PHPDoc/
Doxygen, opened by double-star or bang) and runs of line doc comments
(triple-slash, bang-slash, or caller-supplied prefixes such as Go's
double-slash or Ruby's hash). Grammar-agnostic by prefix match; widens
`getDefinitionNodeFromCaptures` to accept the optional-valued capture map.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01Eh2UmA6f2p25F3ow75Hjzx

* feat(languages): surface leading doc comments as description for all languages (#2270)

Register the leading-doc `descriptionExtractor` on every documentable
provider so Javadoc/KDoc/JSDoc/Doxygen/godoc/RDoc/`///` doc text lands in the
`description` column and reaches the embedding metadata header — making
methods/types semantically searchable by doc-only terms, matching the
behavior Python (docstring) and PHP (Eloquent) already had.

- Java, Kotlin, TypeScript, JavaScript, C, C++, C#, Dart, Rust, Swift: default
  config (block + triple-slash/bang-slash doc comments).
- Go: godoc double-slash leading comments.
- Ruby: leading hash (RDoc/YARD) comments.
- PHP: existing Eloquent metadata takes precedence, else PHPDoc docblock.

Field/property/variable/const docs are intentionally out of scope.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01Eh2UmA6f2p25F3ow75Hjzx

* fix(review): apply autofix feedback (#2270)

Code-review autofix pass on the leading-doc-comment extractor:
- Enforce start-row adjacency in the line-comment run so a doc run stops at a
  blank line (godoc/RDoc/rustdoc semantics). Prevents a Go license/earlier `//`
  block or a Ruby shebang + `# frozen_string_literal:` magic comment, separated
  by a blank line, from being absorbed into the first declaration's
  description. Adjacency uses startPosition.row (reliable across grammars).
- Fix the degenerate empty comment `/**/` producing a spurious `/` description.
- PHP: compose createLeadingDocDescriptionExtractor() as the docblock fallback
  instead of duplicating its body, and widen the param to CaptureMap to match
  the LanguageProvider hook contract.
- Drop the factory's unused `labels` option (no consumer overrides it).
- Add tests: degenerate `/**/`, multi-line `///` run, `//!` inner doc, `/*!`
  Doxygen block, Go/Ruby blank-line non-attachment + two-block adjacency, and
  PHP Eloquent-metadata-wins-over-docblock ordering.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01Eh2UmA6f2p25F3ow75Hjzx

* fix(ingestion): resolve exported TS/JS JSDoc via export_statement wrapper

Exported TS/JS declarations dropped their JSDoc: the TS query captures the
inner function_declaration/class_declaration, whose previousNamedSibling is
null because the JSDoc precedes the wrapping export_statement (PR #2286 review,
reproduced). Add a wrapperNodeTypes option to extractLeadingDocComment (folded
into a LeadingDocCommentOptions object threaded through the factory); when the
captured node yields no doc and its parent type is a configured wrapper, retry
from the parent. TS/JS providers pass ['export_statement']. Language config
stays at the call site (RFC #909). Mirrors the existing walk-up in
languages/javascript/captures.ts for JSDoc params.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* fix(ingestion): bound DOC_BEARING_LABELS to embeddable labels

Module/Delegate/Annotation were doc-bearing but absent from EMBEDDABLE_LABELS,
so their descriptions were extracted and written to the DB yet never embedded
or searchable (PR #2286 review) — wasted work, and the factory JSDoc overstated
"becomes semantically searchable". Remove those three labels so DOC_BEARING_LABELS
is a subset of EMBEDDABLE_LABELS, narrow the JSDoc, and add a subset-invariant
unit test to guard against drift. Making those labels (and C++ `Template`)
searchable needs an embedding-pipeline/schema change and is left as a follow-up.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* fix(ingestion): skip file-top license/header blocks as descriptions

A file-top /** … */ license/copyright/overview block has no package/import
sibling to shield it from the first declaration, so it was absorbed as that
symbol's description and polluted the embedding text (PR #2286 review). The
block-comment branch already cannot use a strict row-adjacency check (grammars
fold the trailing newline into the comment node), so match header markers
instead — SPDX-License-Identifier, @license/@file/@fileoverview, "Licensed
under", and copyright-with-(c)/year. Markers are specific enough not to fire on
an ordinary doc that merely mentions the word "copyright" (over-fire guard test).

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* fix(ingestion): ignore Go/Ruby directive & magic comments in doc runs

Go build/tool directives (//go:build, //go:generate, // +build, //nolint, //line)
and Ruby magic comments / shebang (# frozen_string_literal:, # encoding:, # -*-,
#!, …) sitting directly above a symbol were folded into its description and
polluted the embedding text (PR #2286 review). Add a lineDirectivePrefixes option;
a matching line is skipped in the doc run (skip-and-continue, so a real doc above
an interleaved directive is still collected — godoc/RDoc semantics). Go and Ruby
providers supply their own directive prefixes (RFC #909 — config at the call site).

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* fix(ingestion): guard descriptionExtractor call against throws

A throw inside any provider's descriptionExtractor escaped processFileGroup to
the language-group catch, which treats any throw as "parser unavailable" and
silently drops every remaining file in the group (PR #2286 review). Wrap the
call in try/catch + reportWarning, mirroring the adjacent extractTemplateConstraints
guard. Defensive parity — no behavior change on the success path.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* fix(ingestion): treat Rust //! and /*! as inner docs

Rust //! and /*! are INNER doc comments (they document the enclosing item/module),
not the following item, but the shared helper attached them to the next definition
(PR #2286 review; a test even enshrined the wrong behavior). Add a blockDocPrefixes
option (default ['/**','/*!']); the Rust provider opts out of both inner-doc markers
(lineCommentPrefixes ['///'], blockDocPrefixes ['/**']). Doxygen //! and /*! keep
working for C/C++ via the defaults. Flip the Rust //! test to a negative assertion
and add a Rust /*! negative case.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* fix(ingestion): strip bidi/zero-width controls from doc descriptions

Doc-comment text is attacker-influenceable (any indexed repo) and is returned
verbatim to MCP clients, so a description could smuggle Trojan-Source-style bidi
overrides or zero-width characters (PR #2286 review). Strip U+202A–202E,
U+2066–2069, U+200B–200D and U+FEFF in the doc-comment normalization path
(block + line). Scoped to the description path only — global sanitizeUTF8 is
deliberately left alone (pre-existing, affects all fields). Implemented with a
code-point predicate so no literal invisible bytes live in the source.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* refactor(ingestion): doc-comment helper maintainability cleanups

PR #2286 review nits (no behavior change): drop the unused `export` on
DEFAULT_LINE_DOC_PREFIXES (no importer outside ast-helpers.ts); widen
getLabelFromCaptures' captureMap param to `Record<string, SyntaxNode | undefined>`
to match getDefinitionNodeFromCaptures (all accesses are truthiness-guarded); and
merge the split ast-helpers import statements in dart/ruby/rust into one each.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* docs(architecture): document descriptionExtractor LanguageProvider hook

descriptionExtractor is now a near-universal LanguageProvider field (issue #2270)
but was missing from the architecture "Key fields" table (PR #2286 review). Add a
row describing it and the shared createLeadingDocDescriptionExtractor factory.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* test(ingestion): end-to-end description searchability for exported symbols

The unit tests stop at the descriptionExtractor hook; nothing proved a doc
comment survives the full parse pipeline into node.properties.description (the
field the embedding metadata header reads) — the exact gap that hid the exported
TS/JS regression (PR #2286 review). Add an integration test running the real
worker pipeline over an exported, JSDoc'd TS function and asserting its node
description carries the doc text. Verified locally against a built worker
(20s); runs in CI via pretest:integration build.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* style(ingestion): prettier-wrap a long line in the doc-comment test

Formatting-only follow-up to the U3/U7 test additions so `quality / format` is
green. No behavior change.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
2026-06-24 08:36:55 +01:00
Gergő Magyar
1a03c8527a
feat(group): cross-repo call trace using PDG (#2269)
* refactor(group): extract shared resolveBridgeNeighbors from cross-impact

Lift the uid-filtered consumer<->provider ContractLink join (direction +
queryBridge + row normalization + confidence sort) out of runGroupImpact's
inline Phase-2 block into an exported resolveBridgeNeighbors helper. Behavior
is unchanged for impact; the helper becomes the single shared bridge join so
the upcoming cross-repo trace path never forks its own copy of the neighbor
Cypher. Empty uid sets short-circuit without a DB round-trip.

Adds direct coverage (real bridge via writeBridge/openBridgeDbReadOnly) for
both directions plus the empty-set and unknown-uid edges.

* feat(group): cross-repo trace stitching (groupTrace + runGroupTrace)

Add GroupService.groupTrace and the pure runGroupTrace engine that stitches
per-repo CALLS/HAS_METHOD trace segments across one ContractLink boundary in
the group bridge:

  from --(local trace)--> consumer --(ContractLink)--> provider --(local trace)--> to

- Resolves from/to across all members (symbol node id == bridge symbolUid);
  same-repo endpoints delegate to a single local trace with no crossing.
- Single boundary crossing (MAX_SUPPORTED_CROSS_DEPTH); deeper crossDepth is
  clamped with a note, mirroring cross-impact.
- Discriminated GroupTraceResult union (ok|not_found|ambiguous|error) with
  per-hop repo tags, a typed crossings[] entry, and centralized degraded-state
  note constants (TRACE_NOTES). No .
- Trace-specific pair query (keeps BOTH crossing endpoints) lives in this
  module; the uid-filtered neighbor join (resolveBridgeNeighbors) is reused
  where it fits. ensureBridgeReady exported for reuse.
- New GroupToolPort methods (trace/resolveSymbol/pdgFlows) are optional so
  existing port mocks keep type-checking; runGroupTrace guards on presence.

PDG enrichment is wired as an opt-in hook (enrichSegment) — the port method is
stubbed until U4. Covered by unit tests over a real bridge + mocked port.

* feat(group): route trace tool to groupTrace on @group syntax

Wire the cross-repo trace through the existing @group dispatch:
- callTool routes trace with an @-prefixed repo to callToolAtGroupRepo, which
  forwards from/to/uid/file/maxDepth/includeTests plus the experimental
  pdg/crossDepth flags to GroupService.groupTrace. Member path in @group/path
  is advisory for trace (resolution is whole-group).
- Port gains trace/resolveSymbol/pdgFlows adapters. resolveSymbolForGroup wraps
  the shared resolveSymbolCandidates so groupTrace can locate the member repo
  and recover each endpoint node id (== bridge symbolUid). pdgFlowsForGroup is
  a degraded stub here (call-level only); U4 implements the REACHING_DEF walk.
- trace tool schema documents the @group entry point, pdg, and crossDepth.

Single-repo trace is untouched. Covered by dispatch-routing tests (@group ->
groupTrace, non-group stays local) and tool-schema assertions.

* feat(group): opt-in PDG data-flow enrichment for cross-repo trace

Implement _pdgFlowsForGroupImpl: the real REACHING_DEF anchor walk that backs
the port pdgFlows adapter (replacing the U3 call-level stub). When pdg:true and
the segment repo has a flows PDG layer, the boundary-adjacent segments carry
their intra-procedural def->use hops:

- Anchors by the boundary symbol UID (precise; avoids the by-name ambiguity the
  resolveBlockAnchor path can hit), then reuses the same span-anchored,
  bind-param-only flows query as pdg_query (BasicBlock id-prefix + [start+1,
  end+1] line window; no rel-property index, so the anchor IS the bound).
- Stays intra-procedural: data flow never crosses the repo boundary.
- pdgStampForMode probe: false -> available:false (degrade with note); the
  trace stays ok. Any query failure is swallowed (enrichment is auxiliary).

Covered by runGroupTrace enrichment tests: dataFlow attached on opt-in,
degraded note when no layer, and no pdgFlows call when pdg is omitted.

* test(group): evaluation-first cross-repo trace e2e (two real indexes)

End-to-end gate for the cross-repo trace: stands up two real LadybugDB indexes
(consumer 'frontend' + provider 'backend'), a real ContractLink bridge, and a
real LocalBackend with both repos registered, then drives the public
callTool('trace', { repo: '@grp', pdg: true }) and asserts:
  - the stitched checkout -> callUsers -(CONTRACT_LINK)-> handleUsers -> getUsers
    path, each hop tagged with its member repo
  - real REACHING_DEF data-flow enrichment of the consumer segment (userId)
  - a degraded 'No PDG layer in app/backend' note (provider has no PDG layer)
  - single-repo trace against one member is unchanged (no crossings)

Hand-persists the minimal real graph (deterministic; a full two-repo analyze is
heavier than this gate needs) and exercises real Cypher across
resolveSymbolCandidates, _traceImpl, the bridge pair query, and
_pdgFlowsForGroupImpl. Windows-skipped (describeReopen) and registered in the
cross-platform native-lbug set.

Scoped to a single @group call: opening bridge.lbug read-only a SECOND time in
one process currently fails (shared bridge open/close lifecycle, also affects
impact @group) — the pdg-omitted/clamp variants are unit-covered.

* docs(group): document cross-repo trace + PDG enrichment

ARCHITECTURE.md: trace is now group-aware; describe the @group cross-repo
stitch over a single ContractLink boundary (CONTRACT_LINK hop, crossings[],
crossDepth clamp), the opt-in experimental PDG REACHING_DEF enrichment of
boundary-adjacent segments, the symbolUid-grain join between the two stores,
and the deferred full cross-program (SDG-like) data flow. PIPELINE.md: add the
cross-trace consumer of the bridge with its pair-query rationale.

Does not touch gitnexus/CHANGELOG.md (release-owned).

* fix(review): apply autofix feedback

Apply safe_auto findings from ce-code-review (run 20260622-094243):
- local-backend.ts: drop (r: any) in _pdgFlowsForGroupImpl row map; coerce
  hop line via Number() so a nullish LadybugDB cell can't surface NaN.
- tools.ts: advertise the forwarded  param in the trace schema and add
  crossDepth maximum:10 (schema now matches what groupTrace reads).
- cross-trace.ts: parallelize per-member resolveSymbol/resolveRepo with
  order-preserving Promise.all (matches groupContext/groupQuery); add a note
  when pdg:true is passed to a same-repo trace (PDG only enriches at a
  cross-repo boundary).
- tests: remove  / tighten  (no-any rule).

Residual gated_auto/manual findings (unbounded crossing query + loop,
whole-file PDG widening on absent span, error-vs-no_path masking, top-level
try/catch parity, helper dedupe, branch-coverage gaps) are recorded in the run
artifact for the PR body.

* fix(group): skip CHECKPOINT on read-only bridge close so it can reopen

Root cause of the in-process bridge.lbug reopen failure (which broke repeated
@group impact/trace calls in a long-lived MCP server): closeBridgeDb issued
CHECKPOINT on EVERY handle, including read-only ones. A CHECKPOINT on a
read-only connection has nothing to flush but leaves a WAL/shadow lock artifact
that makes the next read-only open of the same path fail (openBridgeDbReadOnly
returns null -> 'Could not open bridge.lbug read-only'). Reproduced: open ->
query -> closeBridgeDb -> open again returned null only when the close ran
CHECKPOINT; a non-checkpoint close reopened fine, and the raw native
open/close cycle was never the problem.

Fix: tag read-only handles (BridgeHandle._readOnly, set by openBridgeDbReadOnly)
and skip CHECKPOINT for them in closeBridgeDb. Writable handles are unchanged
(they still flush before close). This is the shared bridge-db close path, so
impact @group benefits identically.

- Regression test in bridge-db.test.ts: open/query/close/open/query/open in one
  process now succeeds.
- Re-enabled the second @group call in cross-trace-e2e.test.ts (was scoped to a
  single call for this very limitation).

* fix(group): bring bridge-db close to parity with the core adapter safeClose

The bridge open/close cycle was less robust than the main graph DB's: closeBridgeDb
closed the connection/database but skipped the post-close steps the core adapter's
safeClose performs, so a rapid in-process reopen could race the OS handle release
(Windows) or an orphaned WAL sidecar. That gap is why the close-then-reopen tests
had to skip Windows.

closeBridgeDb now mirrors safeClose after closing the handle:
- waitForWindowsHandleRelease(dbPath): probe the file (+ .wal) until the residual
  Windows lock clears, so the next open does not race (warns if the budget is
  exhausted, matching the core adapter).
- finalizeLbugSidecarsAfterClose(dbPath): quarantine an orphaned WAL (shadow
  missing) so the next open replays a consistent file.

Both helpers are the same ones safeClose uses (Windows-proven via the core adapter
CI), and the bridge read open already retries transient locks. Combined with the
read-only CHECKPOINT skip, the bridge reopen is now robust on every platform, so
the close-then-reopen tests run on all platforms (Windows CI exercises them via the
cross-platform subset). No write-path behavior change; Linux/macOS unaffected.

* fix(group): bound cross-repo crossing fan-out (LIMIT + segment memoization)

Address the top review residual: the bridge crossing query was unbounded and the
crossing-selection loop could run an O(2*N) sequential trace-BFS over every
ContractLink between a repo pair.

- CY_CROSSINGS_BETWEEN now ORDERs BY confidence DESC and LIMITs to
  MAX_CROSSINGS_TO_TRY + 1; listCrossingsBetween slices to the cap and reports
  truncation. Exceeding the cap surfaces a note (no silent truncation), keeping
  the highest-confidence crossings. Aligns with the repo's anchored+LIMIT-bounded
  query discipline (LadybugDB has no rel-property index).
- The home-repo segment (from -> consumer) depends only on the consumer uid and
  the target-repo segment (provider -> to) only on the provider uid, so each is
  memoized by that uid. Many crossings sharing a consumer/provider (one client
  call linked to several providers) now cost one trace per distinct endpoint
  instead of one per crossing. A consumer whose segment already failed is skipped
  for every later crossing that shares it.

Test: two links sharing a consumer (first provider unreachable, second reachable)
assert the from->consumer segment is traced exactly once and the second crossing
wins.

* fix(group): restore Windows skip for bridge reopen tests; drop ineffective close-side probe

The previous commit flipped the bridge close-then-reopen tests to run on Windows,
betting that a close-side waitForWindowsHandleRelease + finalizeLbugSidecarsAfterClose
probe (mirroring the core adapter safeClose) would make the in-process reopen work
there. Windows CI proved otherwise: 4 writeBridge->openBridgeDbReadOnly tests fail
('expected null not to be null' — the read open returns null). The writable-close ->
read-open handoff plus writeBridge's atomic sidecar rename does not release the OS
file handle before the read open races, and the existing open-side LBUG_OPEN_RETRY
only retries lock-pattern errors, not the post-rename sidecar database-id mismatch.
macOS passes; the core adapter's own reopen also passes — this is bridge+Windows
specific.

- Revert itLbugReopen to the Windows skip (the pre-existing, correct state).
- Remove the close-side probe + finalize from closeBridgeDb: it did NOT close the
  Windows gap, and reviewers flagged it for hot-path latency (finalize ran on every
  close, all platforms) and safeClose duplication.
- KEEP the load-bearing fix — skipping CHECKPOINT on read-only handles — which fixed
  the reproduced Linux/macOS in-process reopen artifact (the real bug).

Net: Linux/macOS repeated @group impact/trace works in-process; Windows in-process
bridge reopen remains a documented limitation (unchanged from before this PR).

* fix(group): surface degraded members + cap truncation; honest crossDepth schema

Address the cross-engine-corroborated tri-review findings (Codex + Claude):
- resolveAcrossMembers / runGroupTrace now track member repos that could NOT be
  queried (resolveRepo or resolveSymbol threw) and, when the result is not_found,
  attach a degraded-member note. A transient/corrupt member DB is no longer
  silently reported as a clean 'symbol absent' not_found. (Codex B1+B3 + ce-reliability.)
- The cross-repo not_found now carries a programmatic truncated:true flag (and a
  clearer suggestion) when the MAX_CROSSINGS_TO_TRY cap was hit, so a consumer can
  distinguish 'no path' from 'cap may have hidden a connecting ContractLink'.
  (Codex B3 + ce-adversarial + ce-api-contract.)
- trace tool schema: crossDepth maximum 10 -> 1 to match the implementation's
  single-hop clamp (the schema previously advertised an unsupported 2-10 range).
  (ce-api-contract, conf 100.)

Test: a member whose resolveSymbol throws yields not_found WITH a degraded note
naming the unreachable repo (if-free responder map).

* docs(group): clarify trace @group/memberPath is advisory (resolves all members)

Tri-review (Codex ce, conf 100) caught a doc/impl inconsistency: ARCHITECTURE.md
lumped trace with query/context/impact as honoring @group/memberPath member
scoping, but cross-repo trace resolves from/to across ALL members (the member
path is advisory). Clarify the behavior and point to from_uid/to_uid for
disambiguating same-named symbols across members.

* feat(group): file-level boundary fallback so cross-repo trace works on HTTP contracts

Benchmark (bench/cross-repo-trace/) running the REAL pipeline (runFullAnalysis
--pdg -> real syncGroup -> trace @group) found that cross-repo trace returned
not_found for real HTTP links even though sync built the correct ContractLinks:
HTTP (and other source-scan) contracts hardcode symbolUid:'' (http-route-extractor),
and both cross-trace AND cross-impact join crossings by Contract.symbolUid, which
never matches an empty uid. (Pre-existing — impact @group has the same gap.)

Fix: when a crossing's symbolUid is empty, fall back to the contract's FILE — if
the user's from/to resolves into the contract file, that endpoint anchors the
boundary. CY_CROSSINGS_BETWEEN now returns consumer/provider filePath; a crossing
is kept if it can be anchored by uid OR file on each side; a fileBoundaryFallback
note flags that the boundary is file-level, not symbol-precise. This makes the
common 'trace from=<calling fn> to=<handler fn>' case work end-to-end (verified:
fetchUsers -> listUsers stitches with a CONTRACT_LINK hop + PDG enrichment, 2/2).

Limits (documented in the bench README + the note): anonymous handlers have no
named target; when several contracts share files the file fallback may attach the
wrong contractId to a correct path. The proper upstream fix is to populate
symbolUid in the HTTP extraction (benefits impact too) — the bench is its gate.

Adds a unit test pinning the empty-symbolUid file-fallback stitch.

* fix(group): resolve HTTP contract symbolUid by containment (fixes cross-repo trace + impact)

Addresses the root cause behind the cross-repo trace file-fallback: HTTP
contracts hardcoded symbolUid:'' (http-route-extractor), so both cross-trace and
cross-impact — which join crossings on Contract.symbolUid — could not traverse
HTTP links. (Also found: the pre-existing graph-assisted resolution queried the
wrong edge, CONTAINS instead of DEFINES, so it never resolved a uid either.)

Now the extractor resolves each detection to a real symbol:
- HttpDetection carries the call-site line (node.ts sets it on every express/
  fetch/axios/jquery/nest detection; express also captures the handler arg).
- resolveDetectionSymbol resolves the named handler first, else the innermost
  Function/Method whose line span encloses the call (consumer = the function
  containing the fetch; provider = the named/inline handler), over the correct
  File-[DEFINES]->symbol edge. Base-tolerant (0- vs 1-based startLine).
- Wired into both source-scan and graph-assisted provider/consumer paths.

Verified end-to-end (bench/cross-repo-trace): all 4 contracts now carry real
uids, trace is symbol-precise (GET pair -> http::GET, POST -> http::POST, no
file-fallback note), and impact @group fans out (cross_repo_hits 0 -> 1). The
cross-trace file-level fallback remains as the secondary path for truly
anonymous handlers. Adds 2 containment unit tests; 738 group/integration pass.

Languages other than JS/TS still resolve providers by handler name; their
consumers fall through to the file fallback until their plugins set the line.

* fix(group): extend HTTP symbolUid containment to all languages + nested methods

Completes the symbolUid resolution across every bundled HTTP plugin: Python, Go,
PHP, Kotlin and Java now set the call-site line on their consumer (and Feign/
named) detections, so their HTTP contracts resolve to the containing function
the same way Node/TS already did.

Also generalizes the containment query: it now matches Function/Method/CodeElement
by filePath (UNION ALL) instead of File-[DEFINES]->symbol. The DEFINES edge only
reaches a file's TOP-LEVEL symbols, so methods nested in classes (Java/Kotlin —
File defines the class, the class defines the method) were invisible; matching by
filePath reaches them. Verified against a real index (LadybugDB supports the
UNION); JS/TS still fully symbol-precise (bench 2/2), 709 group tests pass.

Residual is now only the inherent case — a fully anonymous handler with no named
callee — which keeps the cross-trace file-level fallback.

* feat(group): destination trace — follow a consumer to an anonymous handler

Handles the one inherent residual: an anonymous route handler
(`router.get('/x', (req,res) => …)`) has no symbol node at all (the file holds
only a Const + PDG BasicBlocks), so it can never be named as a trace `to`.

Adds a DESTINATION TRACE: omit to/to_uid/to_file on an @group trace and
`trace from=<consumer>` follows the consumer's outgoing HTTP call across the
bridge and reports where it lands — by route + file:line, with a notes[] entry
flagging the handler as anonymous. Implemented as a new branch in runGroupTrace
(p.destination) backed by CY_CROSSINGS_FROM (all ContractLinks leaving the
consumer repo) + stitchToDestination; the provider endpoint is labelled
'<METHOD /path handler>' when its symbolName is a generic token/file basename.

The MCP routing already omitted an absent `to`, so only the schema docs changed.
parseTraceParams now treats a missing `to` as a destination trace instead of an
error. Verified end-to-end: anonymous fixture reports
'app/frontend:fetchUsers -> app/backend:<http::GET::/api/users handler>'; named
fixture lands at the real function. Adds 2 unit tests; 915 group tests pass.

* fix(group): tri-review fixes for cross-repo trace + symbolUid resolution

Two-engine tri-review (Claude swarm+ce + Codex GPT-5.5 swarm+ce+adversarial)
surfaced these; cross-engine-corroborated unless noted.

Correctness (P1, all four lanes): destination trace reported the WRONG endpoint
— an empty-uid consumer made trace(from->from) trivially succeed, so the highest-
confidence same-file crossing won regardless of which call `from` makes.
stitchToDestination now collects ALL connecting crossings, prefers symbol-precise
hits, and returns `ambiguous` (with candidates) when it cannot disambiguate.

Correctness (P1, Codex): resolveDetectionSymbol early-returned null when
d.line==null, blocking NAME resolution for named providers that set no line
(Spring/Go/etc.). Name resolution now runs first; only containment needs a line.

Correctness (P2): resolveContainingSymbol OR-ed `line` and `line-1`, which could
mis-pick a one-line sibling. It now probes the base-correct `line-1` first and
falls back to `line` only if nothing matches.

Correctness (Codex): anonymous Express handlers emitted name:'handler' and could
attach to an unrelated fn literally named `handler`. node.ts now emits name:null
for non-identifier handlers (containment-only).

Robustness: drop the first-symbol-in-file pickSymbolUid guess from the graph
consumer/provider paths (a wrong uid would win the contractId merge); remove the
dead CONTAINS_QUERY fallback (CONTAINS is File->Folder, never a symbol) + the now
-unused pickSymbolUid/handlerName; seed destination notes with degraded-member
notes so a successful trace still surfaces them; providerLabel takes providerUid
so a resolved fn named `handler` is not mislabeled anonymous, and only true file
basenames (known extensions) — not any dotted name — count as anonymous.

API contract: a single-repo trace with no `to` now returns an actionable error
(destination trace is @group-only) instead of "symbol 'undefined' not found".

Maintainability/tests: narrow asLocalTrace per-field (drop as-unknown-as); fix the
PR's lone as-any (vi.mocked); if-free e2e teardown; qualify the bench README.

Adds ambiguous-destination, anonymous-handler-no-false-name, and single-repo-no-to
tests; redirects graph mocks CONTAINS->UNION ALL. 918 group/integration pass.

* fix(group): carry degraded-member notes through SUCCESSFUL group traces

A reviewer (koriyoshi2041, PR #2269) correctly flagged that degraded-member
resolution was surfaced only on not_found, not on a successful ok result. Group
trace resolves names across ALL members, so an ok is 'unique among the members
we could query' — if a member that threw during resolveSymbol also holds from/to,
the real answer could be ambiguous. The destination path already seeded the note
(prior commit); this extends it to the same-repo and cross-repo success paths by
seeding the dispatch notes with degradedNotes([...fromRes.degraded, ...toRes.degraded]).

Adds a regression test: reg-be throws while a same-repo trace succeeds in reg-fe;
the ok result now carries the 'could not be queried' degraded note (app/backend).

* test(bench): cover all implemented cross-repo trace cases in one runner

Replace the single named-handler script with a self-contained verify.mjs that
generates each fixture inline and exercises every implemented end-to-end case
against the real analyze -> sync -> trace/impact pipeline, asserting PASS/FAIL
(exit non-zero on failure). 10 checks across 4 scenarios:
- named handlers: 4/4 symbolUid resolved; symbol-precise GET vs POST crossing
  selection; destination trace lands at the named handler.
- anonymous handler: empty symbolUid; destination trace reports it by route with
  the anonymous note.
- impact @group fan-out (cross_repo_hits >= 1).
- multi-language (Python Flask + requests): link built, cross-repo trace stitches,
  and the file-level boundary fallback is exercised when the provider has no uid.

Ambiguous-destination and degraded-member paths need synthetic inputs the real
analyzer cannot produce, so they stay in the unit suite (documented in the README
+ script header). Removes verify-named.mjs + fixtures-named/ (folded inline).

* test(group): pin destination degraded-success + precise-tier ambiguity

Adds the two regression guards koriyoshi2041 requested on PR #2269 after the
degraded-on-success fix:
- destination trace success with a degraded member: reg-fe resolves from and
  follows the link to an anonymous handler while reg-be throws; the ok result
  carries the anonymous endpoint AND the 'could not be queried' degraded note, so
  the no-to path stays aligned with explicit to traces.
- multiple PRECISE destination hits: one from reaches two consumers with resolved
  uids linked to different routes; the result is ambiguous (role: to) with both
  route candidates. Distinct from the existing file-level ambiguous test, this
  pins the stronger precise tier against a future change silently picking the
  highest-confidence destination.

Both already pass against current behavior; 716 group tests pass.
2026-06-23 07:54:13 +01:00
Goutham Krishna Mandati
4c73b18387
feat(mcp): add trace tool for shortest call path between symbols (#2173)
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* feat(mcp): add trace tool for shortest call path between symbols (#1821)

Implement the \	race\ MCP tool and \gitnexus trace\ CLI command that finds
the shortest directed call path between two symbols using BFS over CALLS +
HAS_METHOD edges.

- MCP tool definition in tools.ts with READ_ONLY annotations
- Directed BFS in local-backend.ts with parent-map path reconstruction
- Symbol resolution via resolveSymbolCandidates (name/UID/file-hint)
- Gap reporting with furthest reachable node and depth tracking
- CLI wiring: gitnexus trace <from> <to> [--from-uid] [--to-uid] [--depth]
- i18n keys in en.ts and zh-CN.ts + help-i18n.ts registration
- ARCHITECTURE.md tools table entry
- 16 unit tests (11 BFS core + 5 CLI wiring)

* test(mcp): account for trace tool in tools.test.ts count

The trace tool makes GITNEXUS_TOOLS length 15; update the hardcoded
count, add 'trace' to the expected-names list, and refresh the stale
"13 tools" comment and it() title.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* fix(mcp): sanitize trace maxDepth to reject 0/NaN/negative

`Math.min(params.maxDepth ?? 10, 30)` had no lower bound and `??` does
not recover 0 or NaN, so `--depth 0|-5|abc` made the BFS loop run zero
iterations and return a false `no_path`. Clamp at the real boundary with
a `Number.isInteger && > 0` guard (the MCP inputSchema minimum is
advisory only), and reject a non-numeric `--depth` in the CLI up front
rather than forwarding NaN.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* fix(mcp): check trace target before applying test-file filter

The `isTestFilePath` filter ran before the target-equality check, but
resolveSymbolCandidates does not exclude test-file symbols. A target (or
a required hop) that lives in a test file was therefore skipped under the
default includeTests=false and produced a false no_path with a
misleading dynamic-dispatch suggestion. Match the explicitly-requested
target first; non-target test-file nodes are still filtered.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* perf(mcp): bound trace BFS with per-level LIMIT and visited cap

The per-level query had no LIMIT and the visited set was uncapped, so a
high-fanout hub could materialize an unbounded frontier. Cap per-level
rows (interpolated LIMIT — Kuzu does not bind LIMIT) and the total
visited set; either cap sets a `truncated` flag so a resulting no_path
reports that the search was cut short rather than implying the graph was
exhausted.

Note: the sibling impact BFS shares the same unbounded pattern; applying
the cap there is deferred (out of scope for this PR).

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* refactor(mcp): clarify trace traverses call + class-member edges

trace was advertised as a "shortest call path" but also traverses
HAS_METHOD (class→member) containment edges so a class-rooted trace can
descend into its methods. Keep that capability (consistent with impact/
context) and make the docs honest: rename EDGE_TYPES→TRAVERSAL_EDGE_TYPES,
state the call + class-member traversal in the MCP/CLI/i18n/ARCHITECTURE
descriptions, and note each hop's edge type is reported in edges[]. No
behavior change.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* fix(mcp): set status:'error' on trace failure responses

Every trace return path sets a `status` discriminator except the
caught-error path, so a consumer switching on `result.status` saw
undefined on failure. Add status:'error' to both the backend trace()
catch and the CLI traceCommand catch.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* fix(mcp): return a friendly error for non-string trace from/to

A non-string from/to reaching resolveSymbolCandidates surfaced a
low-level "x.includes is not a function" via name.includes. Guard the
four name/uid params at the top of _traceImpl and return a structured
status:'error' with a clear message instead.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* refactor(mcp): single row-decode + drop dead field in trace BFS

Decode each BFS row once into named locals instead of repeating
`(row.x ?? row[N])` across the two parent.set calls and the
furthest-tracking. Drop the `type` field from the parent map value (it
was written but never read), and rename the internal `deepestInfo` to
`lastReached` for accuracy (the output field `furthest` is unchanged).
Pure refactor — no behavior change.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* refactor(cli): dedicated trace includeTests i18n key + guard coverage

`trace|--include-tests` reused the impact help key, so rewording the
impact option would silently change trace's help text. Add a dedicated
help.option.trace.includeTests key in en + zh-CN and repoint it. Add CLI
coverage for the (already symmetric) --from-uid/--to-uid flag-value guard
and for --include-tests forwarding.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* test(mcp): faithful BFS mock + expand trace coverage

Fix makeResolveMock: concatenate neighbors across ALL frontier ids (it
returned only the first node's, so a multi-node frontier was unmodelled)
and key the UID branch on params.uid (the old query-text match never
fired). Add coverage: shortest path through the second frontier node
(proves the mock fix), confidence floor fallback, HAS_METHOD traversal
with a mixed edge-type chain, no_path furthest:null, and from_file
disambiguation.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* style(trace): apply root prettier formatting to trace files

The root `quality / format` gate (prettier --check, printWidth 100) runs
on the full repo and flagged the trace sources/tests (the local config
masks it). Reformat to root style — no behavior change; trace + tools
suites and tsc stay green.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* docs(skills): document the trace tool for AI agents

Add `trace` to the GitNexus skill docs so agents reach for it instead of
hand-chaining context/impact hops. The guide gains a Tools Reference row
and a "shortest path between two symbols" subsection (params, result
shape, status/furthest/truncated semantics); the debugging skill gains a
"how does A reach B?" pattern row and a trace tool example. Mirrored to
the .claude and claude-plugin copies (byte-identical) and the cursor copy
(compact style).

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* test(mcp): drop unused trace test fixtures (CodeQL js/unused-local-variable)

CodeQL flagged two unused locals in the trace BFS tests: the top-level
SYMBOL_C and a SYMBOL_D inside the maxDepth test (both defined, never
referenced). Remove them. No behavior change — 58 trace/tools tests stay
green.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

---------

Co-authored-by: Gergő Magyar <gergomagyar@icloud.com>
Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
2026-06-14 10:43:01 +01:00
Gergő Magyar
7c3d4e6862
feat(pdg): control dependence — post-dominators + CDG (Ferrante) [M5 #2085] (#2188)
* feat(pdg): add CDG + POST_DOMINATE edge types (M5 #2085)

* feat(pdg): post-dominator tree on reverse CFG (M5 #2085)

* feat(pdg): Ferrante control-dependence over the post-dom tree (M5 #2085)

* feat(pdg): emitFileCdg + optional POST_DOMINATE debug edges (M5 #2085)

* feat(pdg): wire CDG emission in-phase + pdgModeMismatch CDG-cap stamp (M5 #2085)

* test(pdg): CDG snapshot + end-to-end pipeline answerability (M5 #2085)

* fix(review): apply autofix feedback (M5 #2085)

* fix(pdg): label CDG edges by controller arm sense, not edge kind (#2188 F1/F2/F4)

Tri-review (with Codex as the independent engine) found the CDG 'T'/'F' label
was wrong for the commonest control flow: the M1 TS visitor wires a condition's
fall-through FALSE arm as `seq`/`loop-back`, but `branchSense` mapped both to
'T', so guard clauses, if-no-else, and loop `break` got 'T' instead of 'F' (F1,
P1). The structural CDG edges were correct; only the label — the AC3 "under what
condition does X run?" answer — was wrong.

- F1: replace edge-kind `branchSense` with controller-arm-sense `labelFor`. An
  ambiguous fall-through edge (seq/loop-back) takes the COMPLEMENT of its source
  block's explicit cond-true/cond-false sibling arm. This correctly handles
  do/while (loop-back = TRUE arm) and inner-if-in-loop (loop-back = FALSE arm) —
  the ambiguity a kind→label table cannot resolve. Adds real-parser regression
  tests (the hand-built tests used a fictional cond-false edge and missed it).
- F2: correct the false "sound over-approximation that never drops a real
  dependence" claim in post-dominators.ts — exit-unreachable regions both drop
  and invent control dependences (latent for the current TS visitor, which keeps
  EXIT reverse-reachable). Reframe the exit-less-loop test to characterize, not
  bless, the degenerate behavior.
- F4: make the AC2 property-test reference compute post-dominance INDEPENDENTLY
  (node-removal reachability, no shared code with post-dominators.ts), so a
  post-dom direction bug can no longer pass both the impl and the reference.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* fix(ci): root-prettier format + run-analyze pdg stamp gains maxCdgEdgesPerFunction (#2085)

Two deterministic CI failures from the M5 CDG work:
- quality/format: basicblock-roundtrip.test.ts failed CI's root `prettier --check .`
  (the pre-commit hook uses the gitnexus-local prettier config, which differs);
  reformatted with the root config.
- tests/ubuntu/coverage: run-analyze.test.ts pinned the resolved RepoMeta.pdg
  shape (DEFAULTS) and the all-zero cap override without the new
  maxCdgEdgesPerFunction key (default 5000); added it so resolvePdgConfig
  toEqual and pdgModeMismatch(DEFAULTS) pass. (The stale-test sweep missed this
  file in PR #2188 — same trap M2 hit.)

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* feat(mcp): add pdg_query tool definition (controls/flows modes) [M6 #2086]

* feat(mcp): pdg_query backend — controls (CDG) + flows (REACHING_DEF) + e2e test [M6 #2086]

* feat(mcp): document PDG edges + pdg_query (schema, cypher, skill, --pdg-gated ai-context) [M6 #2086]

* fix(mcp): correct pdg_query symbol-anchor lower bound + harden inputs [PR #2188 review]

Tri-review (Codex + adversarial + correctness lanes) of the M6 pdg_query
surface found the symbol-anchor window over-includes a neighbor function's
block. The upper bound was widened to the 1-based BasicBlock basis (symEnd+1)
but the lower bound was left 0-based, so a block on the line directly above the
target function leaked into the result. Shift both bounds +1 ([symStart+1,
symEnd+1]) so the window is the function's true block span.

Also from the same review:
- pdg_query no longer throws on a no-arguments MCP call: the dispatch passes
  raw `params`, so default it to {} → a clean mode-validation error instead of
  a TypeError. (`explain` shares this latent pattern — pre-existing follow-up.)
- tools.ts: the controls-mode description no longer hard-codes the 'F' branch
  sense for guards — `if (!ok) return;` rides the predicate's 'T' arm; the
  guard:true flag is label-agnostic (regex on the dependent block text).

Tests: a hand-seeded adjacency regression (verified failing without the
lower-bound +1) + a no-arguments validation test. Skill doc updated to document
the two-sided [symStart+1, symEnd+1] window.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* fix(mcp): drop always-true anchor conditional in pdg_query [CodeQL #2188]

CodeQL alert 756 flagged `...(anchor ? { anchor } : {})` in _pdgQueryImpl as a
useless conditional: `anchor` is unconditionally assigned in both the file-path
and symbol branches before the return (the not-found/ambiguous/no-layer paths
return earlier), so it is always truthy. Drop `| undefined` from the declaration
(TypeScript definite-assignment holds across both branches) and emit `anchor`
directly.

No runtime change — the `anchor` field was already present on every result.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* test(cli): add hasPdg to the noStats bridge expectation [#2188]

The M6 work threaded `hasPdg: options.pdg === true` into the AIContextOptions
passed to generateAIContextFiles on the --skills regeneration path, but this
test's strict .toEqual expectation predated it (4 keys vs 3 → CI failure). Add
`hasPdg: false` (the value on this non---pdg path). The assertion stays strict;
the #1477 noStats bridging it guards is unchanged.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* refactor(cli): collapse generateGitNexusContent params to an options bag [#2188]

The function had grown to 9 positional params; reaching `hasPdg` meant passing
six `undefined`s (the M6 review's maintainability flag). Collapse params 3-9
(generatedSkills, groupNames, noStats, skipSkills, runnerPath, defaultBranch,
hasPdg) into a `GitNexusContentOptions` object with the defaults moved to
destructuring. The body is unchanged (same local names); the single production
caller and the test calls become self-documenting named fields.

Pure refactor — generated AGENTS.md/CLAUDE.md content is byte-identical.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* fix(cfg): skip CDG for exit-unreachable CFGs (unsound post-dominance) [#2188]

M5 review P2: computePostDominators roots only at cfg.exitIndex and nothing
enforced that EXIT is reachable from every block. For an entry-reachable region
that cannot reach EXIT (a non-terminating loop, or a multi-terminal CFG a future
visitor might emit) the EXIT-rooted reverse walk degenerates — it both drops
real control dependences and invents spurious ones.

Add a pure precondition predicate `isExitReachableFromAllBlocks` (co-located with
the algorithm it guards) and gate it in emitFileCdg: a CFG that violates it is
skipped for CDG (counted as skippedUnsoundFunctions + one onWarn), while its CFG
and REACHING_DEF projections — which do not depend on post-dominance — are kept.
A CDG-specific gate, not a widening of isEmitSafeCfg, so the blast radius is
exactly the unsound CDG. The current TS visitor always satisfies the
precondition (every loop gets a structural header→loopExit edge), so CDG output
for real fixtures is unchanged.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* fix(cfg): bound computeControlDependence materialization (heap parity) [#2188]

M5 review P2: unlike computeReachingDefs (maxFacts) and the emit-side edge cap,
computeControlDependence materialized the full deduped seen/out before
emitFileCdg's per-function cap could trim it — O(edges × post-dom depth) heap
for a deeply nested function.

Add a `maxEdges` ceiling (default 0 = unbounded) returning {edges, truncated},
mirroring computeReachingDefs's {facts, truncated}. The ceiling is checked
before pushing a new unique edge, so `truncated` means a genuine overflow (not
merely "reached cap"). emitFileCdg passes a FIXED materialization ceiling (8× the
default edge cap) — deliberately NOT derived from the runtime edge cap, because
CDG's materialization IS the deduped-edge quantity the cap reports on (deriving
it would pre-truncate that set and lose the exact dropped count). A ceiling hit
is surfaced via onWarn + the truncated flag — never silent.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* refactor(mcp): share resolveBlockAnchor; fix explain's anchor off-by-one [#2188]

M6 review P2 (duplication) + the flagged pre-existing _explainImpl correctness
follow-up. _pdgQueryImpl and _explainImpl each carried a near-identical
symbol↔block anchor resolver that had DRIFTED: pdg_query used the corrected
[symStart+1, symEnd+1] window (BasicBlock startLine is 1-based, the symbol span
0-based) while _explainImpl still used [symStart, symEnd] — dropping a taint
source on the function's final line AND leaking a neighbor's block on the line
directly above.

Extract one `resolveBlockAnchor` helper, used by both, that applies the correct
window and a single (bare) clause convention (callers compose their own WHERE).
This removes ~50 duplicated lines and fixes explain's anchor in one place.

A hand-seeded characterization test (taint-explain Block 4) pins both bounds —
verified to FAIL on the pre-fix window (it returned the line-10 neighbor instead
of the line-15 final-line source). Existing taint-explain + pdg-query suites are
unchanged (their fixtures have interior sources/sinks).

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* fix(mcp): pdg_query reports "status unknown" when the layer can't be confirmed [#2188]

M6 review P3 (Codex): when meta is UNREADABLE and the bounded global existence
probe returns zero rows of the edge type, _pdgQueryImpl asserted "no PDG layer"
— but a genuinely edge-free layer (all-linear functions) is indistinguishable
from a missing one via that probe. Soften only that fallback path to an
inconclusive "PDG layer status unknown — was this repo indexed with --pdg?"
note. The meta-stamped path (stamp present, cap absent ⇒ layer truly missing)
keeps the definitive "no PDG layer" wording.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* test(mcp): cover pdg_query ambiguous / pagination / Windows-path gaps [#2188]

M6 review test-gap follow-ups, all hand-seeded with controlled data:
- ambiguous symbol name → status:'ambiguous' + ranked candidates shape
  (uid/name/filePath/score), never a silent guess;
- total/truncated page boundary in both directions (limit below the match count
  sets truncated with the full total; limit above it omits truncated);
- a Windows-style filePath containing ':' resolves and fnLineOf decodes the
  function-line segment correctly (split-from-right past the drive letter).

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* docs(skills): ship gitnexus-pdg-query skill mirrors + add pdg_query to the guide [#2086]

M6 bundled pdg_query into this PR, but the skill shipped only in the canonical
gitnexus/skills/ root. Mirror it (byte-identical) to the two hand-maintained
roots the sibling taint skill uses — .claude/skills/gitnexus/ and the plugin —
so Claude Code + plugin users get it too.

Also extend the gitnexus-guide tool reference (all 3 copies, now byte-identical):
add a `pdg_query` row + a "Control & data dependence" section mirroring the
taint/`explain` section, and reconcile the pre-existing drift where only the
.claude copy carried the `check` tool row (a real registered tool) — all three
now list it.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* docs(architecture): refresh CFG/PDG section for the full M1–M6 stack [#2086]

The PR body had deferred the "ARCHITECTURE docs refresh" to #2086; now that M6
ships here, do it:
- MCP tools table gains `explain` and `pdg_query` (were absent).
- "Optional CFG/PDG emission" was M1-only; rewrite to cover the whole opt-in
  stack — M1 CFG, M2 REACHING_DEF, M3/M4 taint, M5 CDG (Ferrante over CHK
  post-dominators, with the exit-unreachable skip), M6 read surface (pdg_query +
  explain, anchored + LIMIT-bounded, shared resolveBlockAnchor) — and note the
  no-Function→BasicBlock-edge join.
- LadybugDB schema notes the `--pdg` additions: the `BasicBlock` node table and
  the CFG/REACHING_DEF/CDG/TAINTED/SANITIZES/TAINT_PATH relation types, kept out
  of the default VALID_RELATION_TYPES / web schema.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
2026-06-13 18:49:03 +01:00
Gergő Magyar
5bf8a17cd5
feat(ingestion): add control-flow-graph layer for TS/JS (#2081) (#2099)
* feat(cfg): language-agnostic CFG construction core (#2081)

U1 of M1 (CFG layer). Plain JSON-serializable CFG data model (BasicBlockData/
CfgEdgeData/FunctionCfg — must survive the worker→main boundary + ParsedFile
store), a CfgBuilder accumulator (leaders→blocks→edges, synthetic ENTRY/EXIT,
idempotent edges), a ControlFlowContext (break/continue/switch + labeled-jump
target stacks), and a TraversalResult ({entry, dangling exits}). AST-agnostic
and unit-tested on the classic control-flow topologies (if/else, while back-edge,
mid-block return, labeled break/continue) the S2 spike validated; reachability
helper backs the R9 property test.

* feat(ingestion): U2 — TS/JS CFG visitor over tree-sitter AST (#2081)

Add the TS/JS CfgVisitor that walks a function's tree-sitter AST and drives
the U1 CfgBuilder to produce a serializable FunctionCfg. One visitor covers
both languages (shared grammar family).

Handles the classic CFG hazards explicitly (R2, R10):
- loops allocate a dedicated loop-exit block so `break` has a concrete target
  before the loop's successor is known; `continue`/back-edge close the loop
  (while, do-while, C-for with init-once + increment-as-continue-target,
  for-in, for-of)
- switch fallthrough falls out naturally: a non-breaking case yields exits we
  wire to the next case as `fallthrough`; a breaking case wires to the switch
  exit via ControlFlowContext
- try/catch/finally: normal completion AND exceptional flow both route through
  finally (post-domination); a conservative exceptional edge models that the
  protected region may raise to its handler (not just explicit `throw`)
- labeled break/continue resolve against the labeled loop's frame
- early return/throw wire to EXIT/handler and terminate their block

19 hazard tests (one per construct) + AC1 10-function fixture; all green.
No change to the committed U1 core or ControlFlowContext.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* feat(ingestion): U3 — worker CFG build + cfgSideChannel + cache coherence (#2081)

Run the CFG visitor in the parse worker (where the AST lives), serialize the
per-function CFG onto a new ParsedFile.cfgSideChannel, and keep it coherent
across the disk-backed store and the warm/durable parse cache (R3, R4).

- gitnexus-shared parsed-file.ts: add `cfgSideChannel?: unknown` as a DISTINCT
  field from captureSideChannel (different producer/consumer/lifecycle; plain
  JSON data — blocks/edges deliberately lack the `nodeId` the store's interning
  reviver keys on, so no mis-interning).
- cfg/types.ts + visitors/typescript.ts: add CfgVisitor.isFunction so the worker
  enumerates functions (and applies the line budget) by a cheap node-type test.
- cfg/collect.ts (new): collectFunctionCfgs walks the tree, builds one CFG per
  function (nested included), applies maxFunctionLines (over-cap = skipped).
- language-provider.ts: add `cfgVisitor?: CfgVisitor<SyntaxNode>` hook;
  typescript.ts attaches it to both the TS and JS providers (shared grammar).
- parse-worker.ts: read pdg + pdgMaxFunctionLines from workerData (read once at
  init — the worker never sees PipelineOptions), gate the build, attach
  cfgSideChannel alongside captureSideChannel.
- parse-cache.ts: bump SCHEMA_BUMP 4→5 (ParsedFile shape changed) and fold the
  pdg flag into computeChunkHash so a pdg-off cached chunk is NOT reused on a
  --pdg run (the #2038-class warm-cache trap). Default path keeps its keys.
- worker-pool.ts + parse-impl.ts + pipeline.ts: thread pdg/pdgMaxFunctionLines
  PipelineOptions → WorkerPoolOptions → workerData, and into the chunk-hash key.

9 boundary tests: collect contract, JSON round-trip identity (no AST leakage),
the pdg cache-key guard, the line-cap skip, and the no-visitor gate. Full CFG
suite (U1+U2+U3) green; build clean.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* feat(ingestion): U4 — emit BasicBlock + CFG within scope-resolution (#2081)

Emit persisted BasicBlock nodes + CFG edges from each ParsedFile's worker-built
cfgSideChannel, INSIDE scope-resolution's Phase-4 graph emission — the last
point where the worker-built CFGs are loaded (emitParsedFiles carries the
channel; the disk store is cleared right after the orchestrator returns). This
is the architecture the doc-review corrected to: a standalone post-`mro` phase
(the issue's literal subtask) provably reads empty data (KTD1).

- cfg/emit.ts (new): pure emitFileCfgs(graph, cfgs, maxEdgesPerFunction, onWarn).
  BasicBlock id = `BasicBlock:<filePath>:<functionStartLine>:<blockIndex>`
  (KTD3 — funcStart disambiguates blocks across functions in one file; no
  `name` column). CFG edge = CodeRelation type 'CFG' with the edge KIND
  (seq/cond-true/…) in `reason` (kinds can't be their own edge type). Per-
  function edge cap stops at the cap and warns with the dropped count — no
  silent truncation (R6/KTD6).
- run.ts: pdg-gated emit pass over emitParsedFiles after emitPostResolutionEdges
  (store still live); RunScopeResolutionInput gains pdg + pdgMaxEdgesPerFunction.
- phase.ts: thread ctx.options.pdg / pdgMaxEdgesPerFunction into the call.
- pipeline.ts: PipelineOptions.pdgMaxEdgesPerFunction.

6 tests: node/edge shape (KTD3 id, no name, type='CFG', kind in reason),
cross-function id uniqueness, AC2 reachability-from-ENTRY property, the edge
cap's no-silent-truncation contract, and empty-input no-op. Flag-off
byte-identity + full runPipelineFromRepo round-trip land in U7. Build clean.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* feat(cli): U5 — `--pdg` opt-in plumbing (CLI + .gitnexusrc → both sinks) (#2081)

Expose the CFG/PDG substrate as an opt-in and thread it from CLI/.gitnexusrc to
the single source of truth (PipelineOptions.pdg), which fans out to BOTH sinks
already wired in U3/U4: the worker build gate (workerData.pdg) and the
scope-resolution emit gate. Off by default (R7).

- cli/index.ts: `--pdg` commander flag.
- cli/analyze.ts: AnalyzeOptions.pdg + pass `pdg` into runFullAnalysis options.
- cli/analyze-config.ts: KEY_SPECS `pdg` (boolean) so `.gitnexusrc { "pdg": true }`
  normalizes and a non-boolean value fails closed with GitNexusRcError.
- core/run-analyze.ts: AnalyzeOptions.pdg → runPipelineFromRepo({ pdg }).

(The internal PipelineOptions/WorkerPoolOptions/workerData fields + the
parse-cache key fold landed in U3/U4; this unit adds the user-facing surface.
The budget knobs stay at internal defaults for M1.)

Tests: analyze-config pdg normalization + non-boolean rejection; opt-in.test.ts
covers the CLI/file merge precedence and that pdg perturbs the chunk-dispatch
key. The full worker-build + main-emit round-trip is the U7 integration test.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* test(ingestion): U7 — CFG acceptance fixtures, parity, end-to-end + docs (#2081)

Acceptance criteria for the M1 CFG layer:
- AC1: a 10-function TS fixture's CFG node/edge set matches a committed snapshot
  (cfg-snapshot.test.ts).
- AC2: every BasicBlock is reachable from its function ENTRY (property test over
  the emitted graph; the fixture has no dead code).
- AC3: hazard fixtures lock the classic-bug coverage — try/throw/finally
  post-domination + labeled break/continue resolution.
- AC4: the existing pipeline-graph-golden test stays byte-identical with --pdg
  off (verified; no UPDATE_GOLDEN), proving the opt-in adds zero default-run
  drift.
- End-to-end (pipeline-pdg.test.ts): runPipelineFromRepo({ pdg: true }) on a
  tiny repo emits BasicBlock nodes + CFG edges with both endpoints present —
  the true both-sinks proof (worker builds → store → scope-resolution emits);
  the default run emits zero.

Docs: CHANGELOG M1 entry, ARCHITECTURE "Optional CFG/PDG emission" subsection
(why emit is in-phase, not post-mro), README CFG language-support note.

Full CFG suite (U1–U7): 56 tests green.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* test(ingestion): drop unused helper in cfg-snapshot test (#2081)

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* fix(review): apply ce-code-review autofix feedback (#2081)

Review (10 reviewers) confirmed OFF-path byte-identity (adversarial + golden)
and found defects all within the --pdg path. Fixes:

- P1 same-line BasicBlock id collision: add a start-column disambiguator to
  FunctionCfg + the id (`BasicBlock:<file>:<line>:<col>:<idx>`) so two functions
  sharing a start line no longer collide under first-writer-wins addNode.
- P1 worker crash-cascade: per-file try/catch around collectFunctionCfgs so a
  CFG-build throw cannot escape to the language-group catch and silently drop
  every remaining file in the group.
- P2 edge-cap drop now logs unconditionally (input.onWarn is validator-gated/
  silent in prod) — upholds the no-silent-truncation guarantee.
- P2 Array.isArray guard before the cfgSideChannel cast in run.ts.
- P2 maxFunctionLines default: worker applies DEFAULT_PDG_MAX_FUNCTION_LINES=2000
  when unset; caps forwarded through run-analyze AnalyzeOptions (closes the
  server-path drop).
- P3 README duplicate paragraph removed; `0`-vs-default docstrings corrected;
  CLI --pdg flag made language-neutral; reachableBlocks JSDoc corrected.
- Documented the break-through-finally + stacked-label CFG limitations.
- Tests: same-line id-collision regression, standalone throw→EXIT, dead-code-
  after-return, async/generator/method coverage, strengthened labeled-continue.

Refuted: the HTTP-500 getNodeQuery finding — M0 already shipped the BasicBlock
branch + name-floor (R12/web-safety handled).

CFG + analyze-config suites: 95 tests green; golden parity (AC4) byte-identical.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* perf(ingestion): benchmark CFG construction + O(n) block-text accumulation (#2081)

Closes the M1 review's requires_verification perf gap ("no benchmark for
collectFunctionCfgs; a wall-time + cfgSideChannel byte-size regression gate
would catch the extendBlock concatenation before kernel scale").

- bench/cfg/measure.mjs (new): build-free tsx harness timing collectFunctionCfgs
  (parse once, reuse the tree) across three scaling scenarios — straight-line
  (extendBlock path), many-functions (collect walk), branchy (block/edge growth)
  — at 500→2000. Reports a wall-time scaling ratio AND a cfgSideChannel
  byte-size ratio, plus an order-independent sha256 over the emitted blocks/edges
  as the behavior gate. `--check` compares both ratios + the fingerprint against
  bench/cfg/baselines.json; mirrors the scope-capture / python-scope harnesses.
- .github/workflows/ci-tests.yml: run the gate on every test job (build-free,
  alongside the existing scope-capture guards) so an O(n^2) re-regression fails CI.
- cfg-builder.ts: structural fix for the one real hotspot the bench surfaced —
  accumulate basic-block text as fragments joined once in finish(), instead of
  concatenating onto a growing string per coalesced statement (O(n^2) → O(n)).
  Behavior-identical (the CFG fingerprint + the AC1 snapshot are unchanged).

Measured (post-fix): time ratios straight-line ~1.3, many-functions ~1.0,
branchy ~1.1 (all sub-quadratic; a true O(n^2) would be ~4.0). cfgSideChannel
bytes scale linearly (~1.0-1.04). 60 CFG tests green; build clean.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* perf(ingestion): add memory + disk growth gates to the CFG benchmark (#2081)

Extend bench/cfg/measure.mjs beyond wall-time to the two other scalability
dimensions that matter at kernel scale:

- DISK growth: utf8 byte size of the serialized cfgSideChannel — exactly what a
  --pdg run writes onto every ParsedFile shard (durable store + parse cache).
- MEMORY growth: retained JS heap of the cfgSideChannel payload, measured by the
  release-delta method (heap held minus heap after dropping it) — robust to
  pre-existing garbage and dead-stable run-to-run. Needs `node --expose-gc`;
  without it the heap metric is null and its gate is skipped (local runs still
  work). ci-tests.yml now passes --expose-gc so the heap gate runs in CI.

Both gated on linear scaling in baselines.json (disk_bytes_budget / heap_budget
1.2-1.3). Measured: disk ~1.0-1.04, retained heap ~0.87-1.0 — both linear
(~1KB/function each; ~2MB heap / 1.6MB disk at 2000 functions, --pdg only).
Bumped REPS 7->15 to stabilize the noisier time signal and widened the coarse
time tripwire budgets (the disk/heap gates carry the tight regression detection).

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* fix(ingestion): address tri-review + CFG-expert findings (#2081)

Corroborated findings from the tri-review (Codex + CE personas + GitNexus swarm
+ a CFG/program-analysis domain-expert lane). The OFF-path stays byte-identical;
all fixes are within the --pdg path or the benchmark.

- [Codex+CFG-expert] Exceptional `throw` edges now wire EVERY block in a try's
  protected region to the handler, not just the body ENTRY. A branched try body
  (`try { if (x) { use(t); } } catch`) previously left interior blocks with no
  path to `catch` — a taint false-negative into the handler for the M2 PDG pass.
- [Codex+CFG-expert] An unresolved labeled jump (a stacked outer label or a
  labeled non-loop block) now routes to the function EXIT instead of leaving a
  dangling sink — restores the single-exit invariant post-dominator/PDG
  computation needs.
- [Codex] computeChunkHash now folds pdgMaxFunctionLines/pdgMaxEdgesPerFunction
  into the chunk key (not just the pdg boolean), so a warm cache built under one
  cap is never served to a run with a different cap (#2038 class, extended to
  the budgets). Adds PdgCacheKey; boolean form kept for back-compat.
- [perf] visitTry resolves catch/finally in a single namedChild pass (the double
  `namedChildren.find` allocated two throwaway arrays).
- [adversarial] The bench `straight-line` scenario now runs at 2000->8000:
  output is a constant 4 blocks so disk/heap can't see the concat path, and at
  the old N a genuine O(n²) was masked by V8 cons-strings. Verified at the new N:
  the array-join impl ~1.0, a rope-optimized `+=` ~1.0 (correctly not flagged),
  a real O(n²) (re-join-every-append) ~3.8 — budget tightened 2.0->1.5.
- [adversarial+Codex] The bench `--check` now FAILS LOUDLY when run without
  `--expose-gc` instead of silently skipping the retained-heap gate.
- Doc: re-labeled the finally-bypass as a SOUNDNESS (false-negative) limitation
  tracked for M2, not mere "precision."

3 new regression tests (branched-try interior→handler, stacked-label→EXIT,
cap-fold key). 99 CFG tests pass; build clean; bench gate green.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* docs(parse-cache): clarify that SCHEMA_BUMP still invalidates caches once (#2099 F6)

The computeChunkHash comment claimed pdg-off warm caches "survive this
change untouched" — true for the key FORMAT, but misleading as an
upgrade-behavior promise: SCHEMA_BUMP 4→5 changes PARSE_CACHE_VERSION
and both stores hard-invalidate on it. Separate the two facts so the
next cache change isn't reasoned about from a false premise.

Review finding F6 (P3) of PR #2099 tri-review.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* fix(cfg): correct for-loop back-edge kinds when no increment clause (#2099 F5)

A for with a body but no increment emitted an unconditional
header→header 'loop-back' self-edge (a path that never executes the
body) while the real back-edge body→header was labeled 'seq'. Any
consumer identifying loops via reason='loop-back' picked the phantom
edge and excluded the body from the natural loop.

Gate the self-edge on the body being absent (the one case where the
header genuinely re-tests itself) and carry 'loop-back' on the body's
exits when they ARE the back-edge, matching visitWhile/visitForIn.

Review finding F5 (P3) of PR #2099 tri-review.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* fix(cfg): treat an empty catch clause as a real handler (#2099 F2)

visitTry keyed handler semantics off the traversal result — null for an
empty body, since visitSeq([]) returns null — instead of the syntactic
clause. An empty `catch {}` was therefore treated as NO catch: the
swallowed exception escaped to the outer handler/EXIT, the no-catch
re-propagation misfired past finally, and code after a try whose body
always throws became unreachable from ENTRY — a hard false-negative
source for the M2 taint pass, on an extremely common pattern.

Synthesize one empty block spanning the clause (entry == sole exit)
when the catch body traverses to null, before the protected region is
walked. Exception flow lands in it and rejoins the normal continuation;
all downstream wiring (handler selection, finally routing, the !catchRes
re-propagation gate) operates on the syntactically-correct shape.

Review finding F2 (P2, reproduced) of PR #2099 tri-review.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* fix(cfg): guard CFG emission per element, not just per outer array (#2099 F4)

The cfgSideChannel guard checked only Array.isArray before casting to
FunctionCfg[] — its own comment promised a wrong-shape value would
'skip emission, not throw a TypeError mid-graph-build', but a malformed
ELEMENT sailed through. Worse, the obvious-looking failure shape never
throws at all: emitFileCfgs string-templates any edge endpoint into the
BasicBlock id and graph inserts are no-throw, so a non-integer endpoint
silently became a dangling 'BasicBlock:…:undefined' edge that degrades
the DB rel-pair COPY to row-by-row fallback inserts much later.

Layered fix matching house precedents (parsedfile-store reviver,
worker-side per-file catch): a per-element shape+content predicate
(arrays + integer edge endpoints) that warns and skips malformed
elements while valid siblings still emit, plus a per-file try/catch
backstop for shapes that genuinely throw (e.g. a null inside blocks).

Review finding F4 (P3) of PR #2099 tri-review.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* fix(parse-cache): drop emit-time edge cap from the pdg chunk key (#2099 F3)

pdgMaxEdgesPerFunction is applied exclusively in emitFileCfgs during
scope-resolution on the main thread — the worker never receives it
(workerData carries only pdg + pdgMaxFunctionLines), so the cached
worker output is byte-identical across cap values. Folding it into the
chunk key (added by a prior review round) only converted a free knob
into a repo-sized cost: every cap change forced a full re-parse and a
durable-store rewrite of unchanged data.

Keep pdg + maxFunctionLines (genuinely worker-visible, shape the cached
cfgSideChannel) and document the classification test in the PdgCacheKey
doc comment so the next option gets sorted deliberately: worker-shard
inputs go in this key; persisted-graph-only inputs belong in the
RepoMeta pdg stamp (F1). Chunks written under the old ns string miss
once and prune — no migration needed.

Review finding F3 (P2) of PR #2099 tri-review.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* fix(analyze): record pdg config in RepoMeta; force full writeback on mode flip (#2099 F1)

Running --pdg against an already-indexed repo silently persisted ~zero
CFG: incremental eligibility had no pdg term, RepoMeta recorded no
mode, and extractChangedSubgraph keeps only changed-file nodes — on a
no-change --pdg re-run every freshly built BasicBlock was dropped from
the written subgraph ('Incremental: changed=0', run succeeds, zero
rows). The converse flip left zombie mixed-coverage blocks only --force
could clean. Worse, a clean-tree flip hit the alreadyUpToDate fast path
and never ran the pipeline at all.

- RepoMeta gains an additive-optional pdg stamp ({maxFunctionLines,
  maxEdgesPerFunction}, resolved values; absent ≡ pdg-off, which covers
  every legacy meta). No INCREMENTAL_SCHEMA_VERSION bump — that would
  force a one-time full rebuild for everyone. The end-of-run meta is a
  fresh literal, so omitting the field on a pdg-off run is what clears
  the stamp after an on→off flip.
- pdgModeMismatch (pure, exported) compares the resolved triple; the
  flip check sits before the fast path and always logs its notice (not
  gated on options.force — --skills implies force with no message of
  its own), naming the .gitnexusrc pdg key that pins the mode.
- The full-rebuild branch now writes the incrementalInProgress dirty
  flag (toWriteCount: 0 sentinel) before the wipe whenever a prior meta
  exists, mirroring the incremental branch. This closes the crash
  window where a rebuild dying between the bulk load and saveMeta left
  meta/DB inconsistent and the fast path certified zombie (or missing)
  CFG rows indefinitely — and incidentally closes the same pre-existing
  hole for user --force runs. Recovery log reworded accordingly.

Tests: pdg-mode-flip.test.ts (real git + LadybugDB; primary assertion
is a direct BasicBlock table count — meta.stats aggregates
nondeterministic Community/Process rows) covering off→on, steady-state
fast path, on→off zombie cleanup, cap-change rebuild, and dirty-flag +
flip composition; pure-helper tests for default resolution and the
0=unlimited carve-out.

Review finding F1 (P1) of PR #2099 tri-review.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
2026-06-10 19:26:45 +01:00
Gergő Magyar
3963c497dd
fix(parse): correct worker-pool docs drift + surface worker-side stack on crash (#2068) (#2070) 2026-06-08 07:20:12 +01:00
Abhigyan Patwari
f0c292f9e7
perf(ingestion): prune inert local value symbols (#2065) 2026-06-07 14:47:51 +01:00
Gergő Magyar
083aedbc41
refactor(ingestion): delete legacy call-resolution DAG + heritage processor (RING4-1, #942) (#2023)
* refactor(ingestion): delete legacy call-resolution DAG + heritage processor (#942)

RING4-1: all 16 production languages (incl. Vue #940) are registry-primary, so
the legacy resolution legs only ran under the now-removed CI parity gate. Calls
and inheritance now resolve exclusively through scope-resolution
(Registry.lookup, preEmitInheritanceEdges, emitHeritageEdges, buildMro →
MethodDispatchIndex).

Removed:
- Call-resolution DAG: call-processor.ts legacy body (processCalls,
  processCallsFromExtracted, resolveCallTarget + all resolver/dispatch/chain
  helpers), model/resolve.ts MRO-via-HeritageMap, model/heritage-map.ts,
  type-env DAG types; inferImplicitReceiver/selectDispatch LanguageProvider
  hooks + Ruby impls; DispatchDecision/ImplicitReceiverOverride/ReceiverEnriched.
- Legacy heritage path: heritage-processor.ts, heritage-types.ts,
  heritage-extractors/, @heritage.* tree-sitter queries, heritageExtractor/
  heritageDefaultEdge/interfaceNamePattern wiring, worker + parse-impl heritage
  passes (parse-worker/parsing-processor lockstep), cross-file-impl DAG pass.
- Scope-parity infrastructure entirely (no legacy↔registry parity left to run):
  scripts/run-parity.ts, scripts/ci-list-migrated-languages.ts,
  ci-scope-parity.yml, test:parity, and the scope-parity ci.yml gate. Resolver
  integration tests still run via the normal tests job.

Kept (shared infra, NOT call-DAG-only): type-env.ts buildTypeEnv (field
extraction / structure phase / embeddings), model/resolve.ts c3Linearize +
gatherAncestors (mro-processor mroPhase), route/fetch/exported-type-map helpers
in call-processor.ts, preEmitInheritanceEdges (legacy-edge dedup simplified).

Acceptance: grep for resolveCallTarget/inferImplicitReceiver/selectDispatch/
buildHeritageMap/HeritageMap/processHeritage/heritageExtractor/@heritage. is zero
across src + test. tsc clean (both packages); resolver integration suite green
(bit-compatible EXTENDS/IMPLEMENTS/CALLS); scope-capture fingerprints unchanged
(python re-baselined: removed redundant ignored captures). ARCHITECTURE.md
updated to scope-resolution-only.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* fix(review): apply autofix feedback (#942)

ce-code-review autofix pass on the RING4-1 deletion:
- parse-cache.ts: bump SCHEMA_BUMP 2→3 — ParseWorkerResult lost its `heritage`
  field, so stale on-disk caches must invalidate (prevents a rollback replaying
  a heritage-less cache into legacy code) [api-contract P2].
- parse-impl.ts: drop 3 now-unused type imports (ExtractedCall,
  ExtractedAssignment, FileConstructorBindings) left by the deferred-block
  removal — would fail the eslint CI gate [correctness+maintainability P1].
- AGENTS.md / CLAUDE.md / scope-resolver.ts contract doc: fix stale pointers to
  the deleted "§ Call-Resolution DAG" section + removed hooks; preserve the
  language-neutrality rule [project-standards P1].
- registry-primary-flag.ts / cross-file.ts / parse-impl.ts: refresh stale
  comments referencing deleted symbols (legacy DAG, runCrossFileBindingPropagation).

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* refactor(ingestion): remove the vestigial isRegistryPrimary flag (#942)

With the legacy call-resolution DAG deleted, the per-language
`REGISTRY_PRIMARY_<LANG>` / `isRegistryPrimary` / `MIGRATED_LANGUAGES` flag had
only one meaningful state — every production language resolves via
scope-resolution — and an explicit `=0` override could only *disable*
resolution with no fallback (a footgun the review flagged). Removing it.

- Delete `registry-primary-flag.ts` and the now-dead `shadow-harness.ts`
  (legacy↔registry shadow-parity tool) + its test.
- Collapse the three flag gates to their behavior-preserving outcome
  (`SCOPE_RESOLVERS == MIGRATED_LANGUAGES`, so this is a no-op):
  - scope-resolution phase now runs for every registered `SCOPE_RESOLVERS`
    entry (was `∩ MIGRATED_LANGUAGES`).
  - import-processor `addImportGraphEdge` + parse-impl `shouldAccumulate`:
    the legacy emit/accumulate paths were already inert for migrated
    languages (scope-resolution owns IMPORTS via the imports-to-edges bridge);
    drop the flag term.
- Collapse flag-branching tests to the scope-resolution path and delete the
  csharp legacy-`=0`-leg describe blocks; remove the ruby/rust-scope env-forcing
  hooks (no-ops now).
- Refresh docs/comments (ARCHITECTURE.md "one registration", scope-resolver
  cookbook, phase deps) — adding a language is now a single `SCOPE_RESOLVERS`
  registration.

Verified: tsc clean (both packages); resolver integration tests green
(747 assertions across cobol/csharp/ruby/rust/typescript/go, IMPORTS edges
intact); grep for the flag symbols is zero across src + test.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* style(format): prettier formatting on #942 changes

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* fix(ci): drop legacy heritage-capture tests + re-baseline scope-capture fingerprints (#942)

Two CI failures from the #942 cleanup, surfaced by the tri-review + CI:

- tree-sitter-languages.test.ts: two tests asserted `@heritage.*` captures
  (Rust trait-impl, Dart extends/implements/with) that this PR removed. The
  acceptance grep used `@heritage\.` (with `@`); these reference the runtime
  capture name `heritage.trait` (no `@`), so they slipped the earlier sweep.
  Inheritance is now covered by the resolver integration suite. (fixed macos-latest)

- Re-baselined the scope-capture bench fingerprints for csharp/rust/ruby/java/
  javascript/kotlin (baselines.json) + python (python-scope/baseline-fingerprint.txt).
  The earlier test-cleanup reworded comments inside the lang-resolution fixture
  files (Shapes.cs, child.rs, derived.rb, IA.java/Plain.java, Service.js, F.kt,
  app.py) to scrub deleted-symbol references for the acceptance grep; those are
  the bench corpus, so capture node positions shifted. Capture LOGIC is
  unchanged — verified `--check` passes for all 14 langs + python. (fixed benchmarks)

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* docs/chore: scrub remaining REGISTRY_PRIMARY + deleted-symbol references (#942)

Tri-review P3 follow-ups (verified):
- TESTING.md: rewrite the "Scope-resolution parity" section — the legacy
  dual-leg (REGISTRY_PRIMARY_<LANG>=0/1) and `npm run test:parity` no longer
  exist; resolver tests run once on the sole scope-resolution path in the
  normal tests job.
- scripts/bench-scope-resolution.ts: drop the inert `REGISTRY_PRIMARY_PYTHON=1`
  env set + usage hint (the flag is gone).
- ruby/scope-resolver.ts, php/captures.ts: re-point doc-comments off the
  deleted heritage-map.ts / heritage-processor.ts to the current behavior.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* fix(ci): prettier format + regenerate scope-capture goldens (#942)

Two more CI failures, same root cause as the bench re-baseline (the
test-cleanup reworded comments in lang-resolution bench/golden-corpus fixtures):

- quality/format: prettier on tree-sitter-languages.test.ts (blank line left by
  the deleted heritage-capture tests) + TESTING.md (the rewritten section).
- tests/ubuntu/coverage: `csharp-captures-golden` (and python/ruby/rust) drifted
  because the edited fixtures feed the per-language capture-golden snapshots too
  (not just the bench). Regenerated via UPDATE_GOLDEN=1. Verified safe: only the
  edited-fixture entries changed; csharp `captureGroups` unchanged (38) — digest
  shifted from comment-position only; capture LOGIC untouched. 1168 scope-
  resolution tests pass.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* test(resolvers): drop createResolverParityIt wrapper, use vitest it directly

The parity-aware `it` wrapper became a no-op when #942 removed the legacy
call-resolution DAG (it just returned vitest's `it`). Remove it entirely so
the resolver tests call vitest's `it` directly instead of shadowing it with a
local `const it` (or `pit`/`rustParityIt`):

- helpers.ts: delete createResolverParityIt + its now-unused vitestIt import
  and VitestIt type.
- 16 files: drop `const it = createResolverParityIt('x')` and import `it`
  from vitest instead.
- ruby.test.ts (pit) + rust.test.ts (rustParityIt): rename calls to `it`.
- Scrub every comment that described the removed wrapper / dual-mode parity
  skip / legacy_skip gate (vue-scope, js/ts/dart/php/python headers, rust x2,
  cpp, swift x4, rust-coverage). Genuine test rationale is kept; only the
  vestigial two-leg framing is dropped. Accurate "legacy DAG (removed in
  #942)" historical notes are retained.

No fixtures touched (no bench/golden re-baseline). tsc clean; rust+ruby
resolver suites green (323 tests, incl. #1992 worker-path parity after a
local dist build).

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
2026-06-04 11:07:37 +01:00
Gergő Magyar
ab077b4c29
feat(ingestion): TypeScript registry-primary scope resolution (Ring 3) (#1050)
* feat(ingestion): TypeScript registry-primary scope resolution (Ring 3)

- Add TypeScript ScopeResolver stack (query/captures/interpret, import decomposition, hooks, arity, merge, receiver binding) and register in SCOPE_RESOLVERS.

- Harden shared compound receiver and receiver-bound CALLS pass for map for-of tuple bindings, dotted typeRef shapes, and callable-alias fallbacks.

- Flip TypeScript into MIGRATED_LANGUAGES; refresh AGENTS.md and type-resolution-system.md.

- Shared finalize-algorithm updates for cross-file scope parity.

- Tests: TS scope-resolution unit suite; legacy call-processor suite forces REGISTRY_PRIMARY_TYPESCRIPT=0; registry-primary flag test opts out TS in override scenario.

Made-with: Cursor

* fix(ingestion): SCC-ordered cross-file return-type propagation + multi-hop re-export resolution

Fix CI failures on PR #1050 (TypeScript registry-primary migration) by
making `propagateImportedReturnTypes` deterministic via reverse-
topological SCC ordering and updating the multi-hop re-export contract
to match `followReexportChain` behavior.

Why: the legacy pass mirrored an intermediate ref instead of the
terminal type when an importer was processed before its source module
had its own typeBindings chain-followed (4-file alias chain regression
in `ts-simple` fixture: `models.User -> service.user -> app.user`
collapsed to `getUser` instead of `User`). Reverse-topological walk of
`indexes.sccs` (leaves first) lets every importer see the source's
already-followed terminal type in a single pass.

Changes:
- `imported-return-types.ts`: rewrite to walk SCCs leaves-first, chain-
  follow the source module's typeBindings BEFORE mirroring, and chain-
  follow the importer's typeBindings AFTER mirroring. Cyclic SCCs
  reach a partial fixpoint (no convergence guarantee, ts-circular only
  asserts no-throw).
- `finalize-algorithm.ts`: docstring update on `FinalizeFile.localDefs`
  to reflect that `followReexportChain` resolves multi-hop re-exports
  through barrels even when intermediates do not surface the name -
  surfacing is now a static optimization, not a correctness requirement.
- `contract/scope-resolver.ts` Invariant I3: explicitly document the
  SCC ordering requirement.
- `pipeline/run.ts`: split PROF timer into `finalize` and `propagate`
  so the pass's cost is observable independently.
- `ARCHITECTURE.md` Performance notes: describe SCC-ordered propagation.
- `imported-return-types.ts`: expand chain-depth comment (2x effective
  depth from pre/post follow), add multi-ref break rationale, add
  `ts-simple` motivating-fixture pointer.

Tests:
- `finalize-algorithm.test.ts`: add 4 cases (3-hop chain, cyclic
  re-export visited-set guard, wildcard re-export fall-through,
  multi-source first-match-wins); fix misleading shared nodeId in the
  thick variant; rename and update the multi-hop test for the new
  contract (transitiveVia assertion on the thin variant).
- `imported-return-types.test.ts` (NEW): unit tests for the SCC pass
  pinning topological collapse, local-annotation guard, missing-source
  skip, and cyclic-SCC no-throw.
- `cross-file-binding.test.ts` + `ts-deep-alias-chain` fixture (NEW):
  5-file integration regression guard for SCC-ordered propagation
  through 4 module boundaries.

Validation: 865 scope-resolution + cross-file tests pass on Windows;
typecheck clean across both packages; only pre-existing Swift overload
failures remain (verified on PR base commit, environmental).

Made-with: Cursor

* fix(ingestion): address PR #1050 review findings — side-effect imports, resolve-cache perf, adapter signature

Three independent fixes surfaced by the production-readiness review of
the TypeScript registry-primary scope-resolution migration (RFC #909
Ring 3). All three pass under both REGISTRY_PRIMARY_TYPESCRIPT=0 and =1.

1. Side-effect imports were silently dropped (correctness regression).
   The legacy DAG emitted IMPORTS edges for `import './polyfill'` because
   its tree-sitter query matches `(import_statement source: (string))`
   regardless of clause. The new registry-primary path returned `[]`
   from `splitImportStatement()` for clause-less imports, so no
   ParsedImport / ImportEdge was ever produced — silent file-level edge
   loss. Add a generic 'side-effect' variant to `ParsedImport` and
   `ImportEdge['kind']` in `gitnexus-shared`; finalize resolves the
   target file and pre-finalizes the edge (no `targetDefId`, no
   `BindingRef`) so the SCC fixpoint loop skips it. The TypeScript
   provider now emits + interprets the new kind end-to-end. The
   variant is intentionally generic so other languages (Rust
   `use foo as _`, Python module-init) can adopt it.

2. Per-import re-derivation in `resolveImportTarget` (perf regression).
   The TS adapter built `new Set(allFilePaths)` on every call and let
   `resolveTsImportTarget` re-derive `allFileList` /
   `normalizedFileList` and discard the `resolveCache`. For a workspace
   with N files and M imports that's O(N × M) work per pass. Wrap the
   adapter in a closure that memoizes all five derived values keyed on
   the orchestrator's `ReadonlySet` identity; reset only when the set
   reference changes (start of new pass). New cost: O(N + M).

3. Misleading fake `ParsedImport` in the adapter (architecture).
   The adapter constructed `{ kind: 'named', localName: '_',
   importedName: '_', targetRaw }` to call `resolveTsImportTarget`,
   even though only `targetRaw` and the structural-typed context are
   read. Extract `resolveTsTarget(targetRaw, ctx)` so the adapter has
   an honest signature; `resolveTsImportTarget` still works for other
   callers. Also extract `narrowTsContext` for the type narrowing.

Tests: - New 4-file fixture `typescript-side-effect-imports` with two
    side-effect imports + one named import.
  - New "TypeScript side-effect imports" describe in
    `test/integration/resolvers/typescript.test.ts` (parity-gated by
    `ci-scope-parity.yml` — runs under both flag states).
  - Updated 2 unit tests to expect 1 side-effect ParsedImport and 4
    `@import.statement` matches (was 0 / 3).
  - 785 / 785 TS scope-resolution tests pass under both
    REGISTRY_PRIMARY_TYPESCRIPT=0 and =1.
Made-with: Cursor

* fix(scope): address Codex adversarial review findings on PR #1050

Four findings from the Codex adversarial review broke registry-primary
TypeScript resolution for common patterns. All four now have unit and
integration regression coverage that pass under both
`REGISTRY_PRIMARY_TYPESCRIPT=0` (legacy DAG) and the default
registry-primary path.

[high] tsconfig path aliases dropped:
Threaded `tsconfigPaths` through ScopeResolver via a new opaque
`resolutionConfig` parameter and a `loadResolutionConfig(repoPath)`
hook. The orchestrator (`scopeResolutionPhase` + `runScopeResolution`)
loads it once per workspace pass and forwards into every
`resolveImportTarget` call. TypeScript resolver now resolves
`@/services/user` style imports through the standard resolver's alias
branch.

[high] TSX parsed with the wrong grammar:
`emitTsScopeCaptures` now picks the parser/query by `filePath`
(`.tsx` -> TSX grammar) and validates cached trees against the
expected grammar via the new exported `tsCachedTreeMatchesGrammar`
helper. Stale TS-grammar trees for `.tsx` files no longer leak through
the scope query.

[medium] Literal dynamic imports never linked:
Added `kind: 'dynamic-resolved'` to `ParsedImport` and `ImportEdge`.
The decomposer emits a synthetic `@import.literal` capture for
string-literal dynamic imports; the interpreter maps that to
`dynamic-resolved`; finalize pre-finalizes it as a file-level terminal
(same shape as `side-effect`). `import('./feature')` now produces a
real IMPORTS edge under the registry-primary path. Legacy DAG keeps
its existing behavior — the new integration assertion is gated behind
the flag.

[medium] Namespace re-exports invisible from barrels:
The decomposer now emits TWO captures for `export * as ns from './m'`
— the existing `reexport-namespace` import draft AND a synthetic
`@declaration.namespace` capture (via `buildNamespaceDeclarationMatch`).
The latter creates a Namespace `SymbolDefinition` in the barrel's
`localDefs`, so downstream `import { ns } from './barrel'` resolves
through `findExportByName`.

Regression fixtures under `gitnexus/test/fixtures/lang-resolution/`:
- typescript-tsconfig-aliases (`@/` alias)
- typescript-tsx-jsx (Button.tsx + App.tsx with JSX)
- typescript-dynamic-import (`await import('./feature')`)
- typescript-reexport-namespace (`export * as Models from './base'`)

Validation:
- gitnexus-shared builds clean
- gitnexus typecheck clean
- 385/385 TS scope-resolution tests pass under both
  `REGISTRY_PRIMARY_TYPESCRIPT=0` and default

Made-with: Cursor

* perf(scope): O(1) defById lookup + bounded re-export depth (PR #1050 round 3)

Addresses the round-3 PR #1050 reviews (Claude adversarial + xkonjin):
both flagged the existing O(N²) `findDefById` linear scan in
`materializeBindings` and the unbounded recursion in
`followReexportChain` as production-readiness blockers for TypeScript
monorepos. Both fixes land alongside their regression tests under
both `REGISTRY_PRIMARY_TYPESCRIPT=0` and the default registry-primary
path.

[high] materializeBindings O(N_files × N_defs × N_edges) → O(N_defs + N_edges):
Build a `nodeId → SymbolDefinition` index map once at the top of
`materializeBindings` (one O(N_defs) pass), then replace the per-edge
`findDefById(files, edge.targetDefId)` linear scan with an O(1)
`defById.get(edge.targetDefId)` lookup. Also drop the now-unused
`findDefById` helper. At realistic TypeScript monorepo scale (~5k
files × ~50 defs/file × ~100k linked import edges) this is the
difference between ~25 s and a few ms inside finalize. Regression
test in `finalize-algorithm.test.ts` builds 200 leaf files +
1 consumer importing one symbol from each, asserts every binding
materializes correctly.

[medium] followReexportChain unbounded recursion:
The existing `visited` set caps depth at `O(N_files)` but allows
recursion proportional to barrel-chain depth, mismatching the
explicit "Iterative DFS to avoid stack overflow" policy in
`tarjanSccs`. Added a `MAX_REEXPORT_DEPTH = 100` constant and a
`depth` parameter to `followReexportChain` (defaults to 0); each
recursive call passes `depth + 1` and the function returns `null`
when the cap is exceeded. 100 is comfortably above any realistic
hand-authored barrel chain (typical depth 1-5; auto-generated
barrels rarely exceed 20) while staying well below JS engine call
stack limits. Regression test wires a 200-link reexport chain and
verifies the crawl terminates cleanly with `linkStatus: 'unresolved'`
(no terminal def reachable within the budget).

[low] synthesizeInstanceofNarrowings bare-identifier-only limitation:
xkonjin's review #4 noted that the LHS narrowing only handles bare
identifiers (`if (x instanceof Foo)`), not member expressions
(`if (user.address instanceof Address)`). Added a JSDoc note
explaining the constraint and pointing readers at field-type
resolution as the workaround for member-chain receivers.

Validation:
- gitnexus-shared builds clean
- gitnexus typecheck clean
- 413/413 tests pass under both flag states for finalize-algorithm +
  TS unit + TS integration suites
- 972/972 tests pass across full scope-resolution + Python +
  C# integration smoke (no cross-language regression)

Made-with: Cursor

* refactor(finalize): replace recursive followReexportChain with SCC-condensed iterative closure

The legacy `followReexportChain` walked re-export drafts via mutual
recursion guarded by a per-call visited set + a `MAX_REEXPORT_DEPTH`
ceiling. Recursion is fragile (call-stack ceiling, no bound on depth
that's actually meaningful), so this replaces it with a structurally
better algorithm: a precomputed per-file re-export closure built by
running Tarjan SCC over the re-export sub-graph and propagating names
in reverse-topological order with a bounded intra-SCC fixpoint.

Algorithm (`buildReexportClosures` in finalize-algorithm.ts):

  1. Sub-graph: build the directed graph of `reexport` + `wildcard`
     drafts only (regular/namespace/dynamic imports do not contribute).
  2. SCC condensation: run the same iterative `tarjanSccs` already
     used for the file-level import graph; output is in reverse-topo
     order so out-of-SCC neighbors are always already-finalized.
  3. Per-SCC propagation:
       - Acyclic singleton: one pass populates from neighbors' closures.
       - Cyclic SCC: bounded fixpoint capped at |SCC|+1 iterations.
         With first-wins precedence the closure map is monotone, so
         each name needs at most |SCC| hops to traverse the cycle.

Precedence (preserved from the recursive crawl):
  - Named re-exports take precedence over wildcards.
  - Within each kind, declaration order wins.

Lookup at finalize time becomes O(1) (`lookupReexportedName`), down
from O(chain_depth × drafts) per consult and recursive at that.

Properties vs the legacy implementation:
  - Stack-safe by construction; no `MAX_REEXPORT_DEPTH` guard needed.
  - 1000-hop barrel chains now resolve in full (legacy capped at 100
    and surfaced anything deeper as `unresolved`).
  - Cycles handled structurally via SCC, not via per-call visited set.
  - Same observable semantics: every existing test passes unchanged.

Tests:
  - Replace the obsolete `MAX_REEXPORT_DEPTH (200-hop chain stops
    cleanly without stack overflow)` test (which asserted the OLD
    bug — that deep chains failed to resolve) with a positive
    1000-hop test that asserts full resolution + accurate
    `transitiveVia`. Proves both the recursion is gone AND the
    closure correctly inherits the leaf def across all hops.
  - Update commentary on adjacent re-export tests to reference the
    closure mechanism.
  - Update `FinalizeFile.localDefs` JSDoc + import-decomposer.ts
    inline doc to point at `buildReexportClosures` instead of the
    removed function name.

Validation: - gitnexus-shared builds cleanly.
  - gitnexus typechecks cleanly.
  - 28/28 finalize-algorithm.test.ts tests pass (incl. new 1000-hop).
  - 801/801 TypeScript scope-resolution tests pass under default
    (registry-primary) AND `REGISTRY_PRIMARY_TYPESCRIPT=0` (legacy DAG).
  - 404/404 Python + C# integration tests pass — no regression in
    cross-language consumers of the shared `finalize`.
Made-with: Cursor

* fix(scope): remove non-null assertions from scope resolution

Made-with: Cursor

* fix(scope): address TypeScript review follow-ups

Made-with: Cursor

* fix(scope): address TypeScript import review follow-ups

Add regression coverage for non-binding import edges and circular TypeScript bindings so PR #1050 review concerns stay visible without changing runtime semantics.

Made-with: Cursor
2026-04-26 08:23:08 +01:00
Gergő Magyar
a7b3fa1b81
feat(csharp): migrate C# to registry-primary scope-resolution (Closes #934) (#1019)
* feat(csharp-scope): unit 1 — scope query + captures orchestrator

First slice of the C# scope-resolution migration (issue #934, RFC #909
Ring 3). Closes `Unit 1` of
docs/plans/2026-04-21-004-feat-csharp-scope-resolution-plan.md.

Adds:
- src/core/ingestion/languages/csharp/query.ts — tree-sitter scope
  query covering compilation_unit, namespace (block + file-scoped),
  class-like (class/interface/struct/record/enum), method-like
  (method/constructor/destructor/local_function/operator), property
  and field declarations, using directives, type bindings (parameter
  annotations, local variable annotations, constructor inference,
  invocation alias), and references (free call, member call including
  null-conditional, constructor call, member write).
- src/core/ingestion/languages/csharp/captures.ts — pass-through
  orchestrator mirroring python/captures.ts. Import decomposition
  (Unit 2), receiver-type-binding synthesis (Unit 3), and arity
  metadata synthesis (Unit 5) stub out for future units.
- src/core/ingestion/languages/csharp/cache-stats.ts — PROF
  instrumentation mirror of python/cache-stats.ts.

Design notes:
- Return-type / field-type / property-type captures deferred.
  tree-sitter-c-sharp does not expose these under a clean named field
  that pattern-matches. When Unit 7 parity gate surfaces a gap, add
  positional patterns or a post-hoc extractor lookup.
- object_creation_expression with qualified_name type — the qualified
  name itself is the reference text; captured as a whole via a
  dedicated tag so interpretation in later units can split namespace
  + name.
- Null-conditional calls use positional descendant patterns because
  tree-sitter-c-sharp's member_binding_expression and
  conditional_access_expression don't expose named fields.

Coverage:
- 23/23 new unit tests in
  test/unit/scope-resolution/csharp/csharp-captures.test.ts cover
  every capture tag. Confirmed against tree-sitter-c-sharp via the
  probe-script loop during development; grammar drift would surface
  as a capture-shape assertion failure.
- tsc --noEmit clean.

No changes to shared infrastructure. Resolver wiring + registration
land in Unit 6.

* fix(csharp-scope): capture null-conditional receiver + operator decls

Adversarial review surfaced two Unit 1 bugs that would silently
corrupt the graph once C# is flipped on the scope-resolution path:

- `obj?.Save()` only emitted @reference.name, so receiver-bound
  resolution downgraded to the free-call fallback and could mis-link
  to an imported `Save`. Capture the conditional_access_expression
  receiver under @reference.receiver.
- `operator_declaration` had @scope.function but no @declaration.method
  owner, so calls inside operator bodies were attributed to the
  enclosing class and the operator itself disappeared from method
  lookup. Capture the operator token as @declaration.name (downstream
  csharpMethodConfig normalizes to op_Addition etc.).
- `conversion_operator_declaration` was missing from both scope and
  declaration sets. Added with the target type as the name anchor.

Arity metadata for overload resolution remains deferred to Unit 5 and
gated behind Unit 7's parity flip, as documented in captures.ts.

* chore(scope-resolution): drop unused python/scopes.scm sibling

The file was documentation-only — the authoritative scope query is
the embedded `PYTHON_SCOPE_QUERY` constant in `python/query.ts`.
Nothing loaded the `.scm` at runtime, so it drifted from the code.
Remove it and update the four doc comments that pointed at it:

- language-provider.ts: "scopes.scm query" → "scope query (embedded
  in each language's query.ts)".
- languages/python.ts: capture-vocabulary pointer → query.ts.
- python/query.ts header: drop the "edit both together" note.
- python/receiver-binding.ts: "keeps the .scm declarative" → "keeps
  the embedded scope query declarative".
- scope/walkers.ts: "Python's scopes.scm" → "Python's scope query".

Historical plan docs under docs/plans/ still reference scopes.scm but
are frozen artifacts, not living documentation. C# never had a .scm
sibling, so no action needed there.

* feat(csharp-scope): Unit 2 — import interpret + target resolver

Adds the three files Unit 2 of the C# scope-resolution plan calls for:

- `import-decomposer.ts` — inspects each `using_directive` node and
  synthesizes `@import.kind/source/name/alias` markers. Kinds:
    `namespace`  — `using X;` / `using X.Y.Z;`
    `alias`      — `using Alias = X.Y.Z;`         (generics stripped)
    `static`     — `using static X.Y;`
  `global using` maps to namespace (plan's deferred decision); the
  `global::` qualifier is stripped before emitting.
- `interpret.ts` — reads the markers and builds `ParsedImport`. Static
  using maps to `kind: 'wildcard'` since it brings members into
  unqualified scope; Unit 4's merge-bindings tiers wildcards lowest.
  Also provides `interpretCsharpTypeBinding` with nullable/single-arg
  generic/qualifier stripping so receiver-typed resolution sees the
  concrete class name.
- `import-target.ts` — suffix-match adapter returning a single primary
  file. Cross-file partial-class aggregation runs later at graph-bridge
  time (Unit 6). The csproj-based `resolveCSharpImportInternal` stays
  on the legacy path until Unit 7's parity gate surfaces a gap.
- `captures.ts` routes `@import.statement` matches through the
  decomposer so the interpreter sees the markers it needs.

Tests cover every using flavor + resolution edge cases. 38/38 scope-
resolution C# unit tests pass; tsc clean.

* feat(csharp-scope): Unit 3 — simple hooks (binding/import/receiver)

Adds simple-hooks.ts mirroring Python's pattern:

- `csharpBindingScopeFor` — delegates to innermost (block scope is
  already captured by @scope.block in the query).
- `csharpImportOwningScope` — binds `using` inside a namespace to that
  namespace's scope so imports don't leak into sibling namespaces.
  File-level using delegates to module. Function-body using (not legal
  C# but possible from malformed input) attaches to the function.
- `csharpReceiverBinding` — looks up `this` / `base` in the function
  scope's type bindings; returns null for statics, free functions, and
  non-Function scopes. `this` / `base` synthesis itself is deferred to
  a follow-up (matches Python's receiver-binding.ts pattern).

9 new tests pin delegation semantics. 47/47 C# scope-resolution unit
tests pass; tsc clean.

* feat(csharp-scope): Unit 4 — mergeBindings (using precedence)

Three-tier shadowing, same shape as Python's LEGB merge:
  0: local      — class members, locals, parameters
  1: using      — namespace / named / reexport (equal tier; compiler
                  requires explicit qualifier if two using collide)
  2: wildcard   — `using static X.Y;` static-member imports

Within the surviving tier, de-dup by DefId (last-write-wins) so a
re-declared `using` cleanly replaces its earlier binding. Explicit
interface implementations bind under their qualified name in the
extractor layer, so they don't collide with plain simple names here.

7 new tests pin precedence + dedup semantics. 54/54 C# scope-resolution
unit tests pass.

* feat(csharp-scope): Unit 5 — arity metadata synthesis + compatibility

Adversarial review flagged overload narrowing as a blocker for the Unit
7 flip. This lands the declaration-side metadata; callsite-side arity
synthesis is a separate gap we'll address if the parity gate surfaces
overload misresolution.

- `arity-metadata.ts` — reads `csharpMethodConfig.extractParameters`
  and produces `{ parameterCount, requiredParameterCount,
  parameterTypes }`. `params` variadic collapses parameterCount to
  undefined (matches Python's `*args` treatment) and appends a literal
  `'params'` marker to parameterTypes so the compatibility hook can
  detect it without re-reading the AST. Default-valued parameters
  contribute to optionalCount → requiredParameterCount = total − optional.
- `arity.ts` — `csharpArityCompatibility(def, callsite)` returns
  compatible / incompatible / unknown. Mirrors Python's three-verdict
  shape so the central registry's arity filter works without adapter
  logic per-verdict.
- `captures.ts` — on every @declaration.method / @declaration.constructor
  / @declaration.function match, synthesize
  @declaration.parameter-count, @declaration.required-parameter-count,
  and @declaration.parameter-types captures. Covers method_declaration,
  constructor_declaration, destructor_declaration, operator_declaration,
  conversion_operator_declaration, and local_function_statement.

12 new tests: 5 on captures-side synthesis (method + params + types +
variadic + constructor + local function), 7 on the compatibility hook.
66/66 C# scope-resolution unit tests pass; tsc clean.

* feat(csharp-scope): Unit 6 — wire csharpScopeResolver + register

Creates the public barrel (index.ts) and ScopeResolver (scope-resolver.ts)
and plumbs them into the provider + registry:

- `languages/csharp/index.ts` — re-exports the hook entry points and
  documents the 8 known limitations of the registry-primary path
  (csproj-driven namespace resolution, multi-file namespace expansion,
  type-based overload resolution, nested generics, dynamic, preprocessor
  branches, cross-file global using, expression-bodied members).
- `languages/csharp/scope-resolver.ts` — ScopeResolver shape mirroring
  Python's. `isSuperReceiver` matches the literal `base` keyword.
  `fieldFallbackOnMethodLookup: false` since C# is statically typed
  — the type-binding layer already produces precise owner types;
  `propagatesReturnTypesAcrossImports: true` since signatures are
  authoritative.
- `languages/csharp.ts` — adds the 9 hook entry points to the provider
  (emitScopeCaptures, interpretImport, interpretTypeBinding, four
  simple hooks, mergeBindings, arityCompatibility, resolveImportTarget).
- `scope-resolution/pipeline/registry.ts` — registers csharpScopeResolver
  alongside the Python entry.

MIGRATED_LANGUAGES stays at {Python} — the resolver sits idle until
Unit 7's parity gate confirms ≥99% fixture parity. 368/368
scope-resolution unit tests pass; tsc clean.

* feat(csharp-scope): parity Unit 1 — this/base receiver-binding synthesis

Closes 3 parity failures (51 → 48). Target bucket: Category C from the
parity plan.

Changes:
- `languages/csharp/receiver-binding.ts` (new): walks up from a
  function node to the enclosing class/struct/record/interface,
  synthesizes `@type-binding.self` captures with boundName `'this'`
  (and `'base'` when the enclosing type is a class/record with an
  explicit base_list entry). Skips static methods and interface /
  struct `base` cases. Anchors to the method's `body` block so the
  scope-extractor's positionIndex places the binding inside the
  function scope (not the enclosing class scope).
- `languages/csharp/captures.ts`: route `@scope.function` matches
  through the synth, emitting the receiver captures as separate
  matches.
- `languages/csharp/interpret.ts`: map `@type-binding.self` to
  `source: 'self'` (parity with Python).
- `languages/csharp/query.ts`: explicit patterns for `this.X()`,
  `base.X()`, and `this.X = ...` / `base.X = ...` assignment writes.
  `this` and `base` are anonymous tokens in tree-sitter-c-sharp so
  the existing `expression: (_)` pattern (named-only) didn't match.

Tests:
- 8 new unit tests for receiver-binding synthesis edge cases
  (class/struct/record/interface, static, nested, constructor,
  local function inside method).
- Parity: 48 failed | 127 passed (175) under REGISTRY_PRIMARY_CSHARP=1;
  legacy path 175/175 green.

* feat(csharp-scope): parity Unit 2a — foreach + pattern + field captures

Closes 11 parity failures (48 → 37). Partial Unit 2 progress.

Adds type-binding captures for every shape the parity suite exercises
whose resolution path is in-file:

- Typed foreach `foreach (User u in xs)` — @type-binding.annotation
  with bindingName `u` and type `User`.
- Var foreach `foreach (var u in xs)` — @type-binding.alias so the
  generic-stripper unwraps `List<User>` / `Dictionary<K,V>.Values` to
  the element type at chain-follow time. Matches Python's for-loop
  alias pattern.
- `is` pattern `if (obj is User u)` — @type-binding.annotation with
  scope narrowing simplified to function scope (matches Python's
  match-case treatment since we don't emit @scope.block).
- `switch_section > declaration_pattern` (`case User u:`) — no
  case_pattern_switch_label wrapper in tree-sitter-c-sharp.
- `recursive_pattern` (`is User { Age: 1 } u` / `case User { ... } u:`)
  — named binding via type+name fields on the pattern node.
- Field declaration `private City _city;` — @type-binding.annotation
  attached to the class scope for `this._city.X` resolution.
- Property declaration `public User Owner { get; set; }` — same.
- Assignment rebind `alias = Factory()` / `alias = new User()` —
  @type-binding.alias / @type-binding.constructor so reassignment
  propagates type info to later receiver-typed resolution.

Closed tests: foreach (3), var foreach Tier 1c (2), is-pattern (1),
switch pattern (2), recursive_pattern (3). Remaining 37 include
tests that need cross-file same-namespace visibility (field chains,
assignment chain, cross-file return-type propagation) — deferred to
Unit 5 where the IMPORTS/cross-file work lives.

74/74 scope-resolution unit tests pass; legacy path 175/175 green.

* feat(csharp-scope): parity Unit 2b — same-namespace cross-file visibility

Closes 3 parity failures (37 → 34). Adds the C#-specific implicit
import that has no syntactic counterpart: every type declared in
`namespace X` is visible to every other file also declaring
`namespace X`, without any `using` directive.

Changes:
- `scope-resolution/contract/scope-resolver.ts` — new optional hook
  `populateNamespaceSiblings(parsedFiles, indexes, { fileContents })`.
  Most languages leave it undefined; Python / TypeScript / Java need
  explicit imports so there's no analogous pass.
- `scope-resolution/pipeline/run.ts` — invoke the hook after
  `buildWorkspaceResolutionIndex` and before
  `propagateImportedReturnTypes` so the return-type pass sees
  cross-file sibling class bindings.
- `languages/csharp/namespace-siblings.ts` (new) — groups top-level
  class-like defs by namespace name (extracted from source via regex
  since `file_scoped_namespace_declaration` scope range covers only
  the declaration line, not the rest of the file). Injects sibling
  classes into each file's Module AND Namespace scope bindings with
  origin='namespace'. Local declarations shadow cross-file siblings
  via mergeBindings tier precedence.
- `languages/csharp/scope-resolver.ts` — wire the hook.

74/74 scope-resolution unit tests pass; legacy path 175/175 green;
34 parity failures remain (was 37) under REGISTRY_PRIMARY_CSHARP=1.

* feat(csharp-scope): parity Unit 2c — alias/await/return-type captures

Closes 7 parity failures (34 → 27). Adds the remaining type-binding
shapes the parity suite exercises:

- `var alias = u;` / `alias = u;` — identifier-to-identifier alias.
  The resolver's chain-follow walks alias → u → u's declared type.
- `var u = svc.GetUser();` — chained method call alias. Anchors on
  the method_access_expression's `name` field; chain-follow picks up
  GetUser's return type.
- `var u = await Factory();` / `await svc.Get();` — await propagation.
  Strips the `await_expression` wrapper; interpret layer's
  `stripGeneric` handles `Task<T>` / `ValueTask<T>` unwrapping.
- `public User GetUser() { ... }` — method return-type annotation
  via `@type-binding.return`. Required for `propagateImportedReturnTypes`
  to see the return type in later cross-file passes. Covers identifier,
  generic_name, qualified_name, and nullable_type return shapes.

74/74 scope-resolution unit tests pass; legacy path 175/175 green;
27 parity failures remain under REGISTRY_PRIMARY_CSHARP=1.

* feat(csharp-scope): parity Unit 3a — cross-namespace `using` binding

Closes 2 parity failures (27 → 25). Extends the namespace-siblings
pass to resolve `using X;` directives against known namespace
buckets: for each `using` that targets a namespace declared
somewhere in the workspace, inject that namespace's classes into
the importer's module scope with origin='namespace'.

This is the scope-resolution analog of legacy's csproj-driven
directory↔namespace mapping. Without it, `new User()` in
`Services/UserService.cs` (namespace MyApp.Services) can't see the
User class in `Models/User.cs` (namespace MyApp.Models) even with
`using MyApp.Models;` — the scope-resolver layer doesn't have
csproj metadata to translate the dotted namespace path into a
directory lookup.

Legacy 175/175 green; 25 parity failures remain.

* feat(csharp-scope): parity Unit 3b — constructor CALLS emission

Closes 3 parity failures (25 → 22). Adds constructor-form CALLS
edge emission + C# 12 primary constructor synthesis.

Changes:
- `scope-resolution/passes/free-call-fallback.ts`: when a site's
  callForm === 'constructor', look up the class def (not a callable)
  and pick its explicit Constructor def via workspaceIndex's
  memberByOwner — or fall back to the Class def itself for implicit
  constructors. Matches legacy behavior (targetLabel === 'Constructor'
  when explicit, 'Class' when implicit).
- `scope-resolution/pipeline/run.ts`: pass workspaceIndex to the
  free-call fallback.
- `languages/csharp/captures.ts`: synthesize @declaration.constructor
  for C# 12 primary constructors — `class User(string name, int age)`
  / `record Person(string First, string Last)`. The parameter_list is
  a named child of the class_declaration / record_declaration (not a
  separate constructor_declaration node). Skip the synthesis when
  the type already has an explicit constructor to avoid duplicates.
  Emits @declaration.parameter-count + required-parameter-count
  alongside.

Legacy 175/175 green; 376/376 scope-resolution unit tests pass;
22 parity failures remain.

* feat(csharp-scope): parity Unit 3c — static call + default-namespace

Closes 2 parity failures (22 → 21).

- `receiver-bound-calls.ts`: add Case 5 for class-as-receiver. When
  `Animal.Classify()` has an identifier receiver that resolves to a
  Class binding (rather than a variable with a typeBinding), look up
  the member on the class's MRO chain. Covers C#-style static calls
  and any type-qualified member access. Python doesn't hit this
  because `ClassName.method()` is syntactically identical to a free
  call there.
- `namespace-siblings.ts`: treat files with no `namespace X;`
  declaration as living in the default (empty-name) bucket, so
  types declared in no-namespace files share cross-file visibility.
  Required for fixtures without explicit namespaces (e.g. the
  method-enrichment fixture's Animal/App/Dog classes).

Legacy 175/175 green; 21 parity failures remain.

* feat(csharp-scope): parity Unit 4 — callsite arity synthesis (infra)

Synthesize @reference.arity on every invocation_expression and
object_creation_expression by counting `argument` named children of
the backing `argument_list`. Wires the capture-to-Callsite pipeline
shared extractor already consumes (`scope-extractor.ts:878`).

No parity-count movement: the remaining arity-adjacent failures
(overload disambiguation, optional-parameter dedup, variadic
resolution) need type-based argument inference or member-call dedup,
both explicitly deferred in the plan's Known Limitations section.
This commit is infrastructure — future work lands on top of it.

Legacy 175/175 green; 21 parity failures remain.

* feat(csharp-scope): parity Unit 5a — IMPORTS edge + static-using mapping

Closes 1 parity failure (21 → 20). Fixes cross-file IMPORTS edge
emission for C#:

- `languages/csharp/interpret.ts`: map `using static X.Y;` to
  `kind: 'namespace'` rather than `'wildcard'`. The File→File
  IMPORTS edge needs a non-wildcard kind to survive finalize's
  Phase 4 (wildcard-expanded edges drop to empty when the provider
  doesn't implement `expandsWildcardTo`). Unqualified static-member
  access is a deferred limitation — covered by the namespace-siblings
  cross-namespace pass for type lookups, and documented under the
  module's Known Limitations.
- `languages/csharp/import-target.ts`: progressive prefix stripping.
  `using CrossFile.Models;` in a repo laid out `Models/User.cs` (no
  `CrossFile/` directory) works because the legacy resolver consults
  csproj; the scope-resolver tries each suffix of the dotted path
  against `.cs` files. Also handles `using static NS.Type;` by
  stripping leading segments until a direct match lands.
- `test/unit/scope-resolution/csharp/csharp-imports.test.ts`: update
  the `using static` test to the new namespace-kind shape.

376/376 scope-resolution unit tests pass; legacy 175/175 green;
20 parity failures remain.

* feat(csharp-scope): parity Unit 5b — return-type module hoist + chain fallback

Closes 1 parity failure (20 → 19) and lays groundwork for Unit 6.
Based on investigation-agent findings, addresses cluster of 7
cross-file + chain tests whose return-type bindings were stuck at
Class scope and invisible to the chain-follow and propagation passes.

Changes:
- `languages/csharp/simple-hooks.ts::csharpBindingScopeFor`: when the
  declaration is a `@type-binding.return`, hoist the binding all the
  way to the Module scope. The central extractor's auto-hoist only
  promotes one level (Function → Class); for C# methods the parent
  is always a Class, so without this override the return binding
  never reaches Module where chain-follow and cross-file
  `propagateImportedReturnTypes` read from.
- `scope-resolution/passes/compound-receiver.ts`: when the
  class-scope typeBindings lookup at `objClass.typeBindings.get(
  methodName)` misses, walk up from the class scope through the
  parent chain (→ Module) for a return-type binding. Preserves the
  existing class-scope fast-path while restoring owner-chain lookup
  for languages that hoist to Module.

Python parity suite stays 204/204 green on both flag paths;
legacy C# 175/175 green; 19 C# parity failures remain.

* feat(csharp-scope): parity Unit 5c — switch-expr + reasons + ACCESSES 1.0

Closes 4 parity failures (19 → 15).

- `languages/csharp/query.ts`: add captures for `switch_expression_arm`
  with `declaration_pattern` and `recursive_pattern`. C# expression-
  switch (`obj switch { User u => ..., Repo { Name: "x" } r => ... }`)
  uses a different AST node from classic `switch_statement`'s
  `switch_section` — needed separate query patterns.
- `scope-resolution/passes/receiver-bound-calls.ts`: replace the
  self-describing `'scope-resolution: *-receiver'` reason strings
  (which fail legacy-parity consumer filters) with the legacy
  convention: `'import-resolved'` when the resolved member lives in
  a different file, `'global'` otherwise. Mirrors
  `free-call-fallback.ts`'s existing reason logic.
- `scope-resolution/passes/receiver-bound-calls.ts`: pass
  `confidence: 1.0` to `tryEmitEdge` for write/read ACCESSES edges,
  matching legacy DAG behavior (default 0.85 was legacy-CALLS).

Python parity 204/204 on both flag paths; legacy C# 175/175;
15 C# parity failures remain.

* feat(csharp-scope): parity Unit 5d — cross-file typeBinding mirror

Closes 3 parity failures (15 → 12).

`languages/csharp/namespace-siblings.ts`: extend the pass to mirror
method return-type bindings from accessible sibling files' Module
scopes into the importer's Module scope. "Accessible" =
same-namespace siblings + `using namespace X;` targets.

Without this mirror, `var u = svc.GetUser()` in App.cs couldn't
chain-follow to User even after Unit 5b's module-scope hoist:
`GetUser → User` lived on User.cs's Module scope, which isn't on
the ancestor chain of App.cs's function scope, and
`propagateImportedReturnTypes` only mirrors across explicit
ImportEdge targets (not same-namespace implicit visibility).

Closes: var-invocation return type, async/await u.Save (ambient
namespace), cross-file return-type propagation (via u.Save /
u.GetName in Program.cs).

Python parity 204/204 on both flag paths; legacy C# 175/175;
12 C# parity failures remain.

* feat(csharp-scope): parity Unit 5e — namespace-prefix bucket matching

Closes 2 parity failures (12 → 10).

`languages/csharp/namespace-siblings.ts`: when matching accessible
namespaces against class buckets, also probe every dotted prefix.
`using static CrossFile.Models.UserFactory;` parses into the
importer's accessible-namespace set as the full type path, but the
matching bucket is keyed on the containing namespace
(`CrossFile.Models`). Walking back through the dotted segments
ensures the static-using importer sees the containing namespace's
sibling files' return-type bindings.

Legacy 175/175 green; 10 C# parity failures remain.

* feat(csharp-scope): parity Unit 6a — class-like owner extension

Closes 1 parity failure (10 → 9). Extends `populateClassOwnedMembers`
to recognize Interface / Struct / Record / Enum / Trait as class-like
owners, not just Class.

The C# scope query collapses interface_declaration / struct_declaration
/ record_declaration / enum_declaration to @scope.class (they share
body-scope semantics), but the declaration-side tags produce defs of
type Interface / Struct / Record / Enum. `populateClassOwnedMembers`
previously only looked for Class-typed defs in class scopes, so
interface members (including C# 8+ default methods) never got
ownerIds — making them invisible to `findOwnedMember` via
`memberByOwner`.

With this fix, `user.Validate()` on a variable typed as `IValidator`
resolves correctly: receiver-bound-calls Case 4 finds IValidator via
findClassBindingInScope (which already accepted Interface), walks the
chain, and findOwnedMember locates Validate now that the interface
default has a proper ownerId.

Legacy C# 175/175 green; Python parity 204/204 on both flag paths;
9 C# parity failures remain.

* feat(csharp-scope): parity Unit 6b — member-call dedup + handled-site fix

Closes 1 parity failure (9 → 8). Adds the missing legacy-parity
behavior: collapse multiple member-call sites from the same caller
to the same target into one CALLS edge.

Changes:
- `scope-resolution/contract/scope-resolver.ts`: new optional
  `collapseMemberCallsByCallerTarget` flag. Default false (preserves
  the per-site invariant); C# sets it true.
- `scope-resolution/graph-bridge/edges.ts`: dedup key drops
  `line:col` when `collapseByCallerTarget` is on AND edgeType is
  `CALLS` (ACCESSES writes keep per-site granularity).
- `scope-resolution/passes/receiver-bound-calls.ts`: plumbs
  `collapse` through every `tryEmitEdge` call, and crucially marks
  `handledSites.add(siteKey)` whenever a resolved def was found —
  not only when the edge was freshly emitted. Otherwise the site
  leaked through to `emitReferencesViaLookup` which re-emitted a
  per-site edge, defeating the collapse.
- `languages/csharp/scope-resolver.ts`: opt in to the collapse.

Python parity 204/204 on both flag paths; legacy C# 175/175 green;
8 C# parity failures remain.

* feat(csharp-scope): parity Unit 6c — Dictionary.Values / .Keys unwrap

Closes 2 parity failures (8 → 6).

Dictionary<K,V>.Values in a foreach binds the element to V; .Keys
binds to K. Without this, `foreach (var user in data.Values)` where
`data: Dictionary<string, User>` couldn't propagate user's type to
User, and `user.Save()` stayed unresolved.

Changes:
- `languages/csharp/interpret.ts`: don't strip the qualifier when
  the final dotted segment is a known collection accessor
  (`Values` / `Keys`). Preserves the dotted form so downstream
  resolvers can unwrap the receiver's generic type based on the
  suffix.
- `scope-resolution/passes/compound-receiver.ts`: new
  `extractDictionaryArgs` helper splits `Dictionary<K, V>` at the
  top-level comma. In the dotted-access walk, detect trailing
  `.Values` / `.Keys` and return V/K via findClassBindingInScope
  instead of the normal class-walk (Dictionary itself isn't a
  local class def).
  - Handles nested cases: `this.data.Values` walks `this.data`
    recursively (resolving `data` as a field on `this`'s class)
    before applying the unwrap.
- `scope-resolution/passes/receiver-bound-calls.ts` Case 3b: when
  the typeRef's trailing segment is an accessor, pass the raw
  dotted path to `resolveCompoundReceiverClass` without appending
  `()` — the extra parens would misroute to the call-expression
  branch.

Python parity 204/204 on both flag paths; legacy C# 175/175 green;
6 C# parity failures remain.

* feat(csharp-scope): parity Unit 6d — using-static member injection

Closes 2 parity failures (6 → 4). `using static X.Y.Z;` now injects
every public static method of class Z into the importer's module
scope, so `Record("hi")` (without `Logger.` qualifier) resolves to
`Logger.Record` as a free call.

`languages/csharp/namespace-siblings.ts`: regex-scan each file's
source for `using static X.Y.Z;` directives. For each, look up the
class Z in the `X.Y` namespace bucket, walk its owning file's
localDefs for method/function members with `ownerId === Z.nodeId`,
and inject them as `origin: 'import'` bindings in the importer's
module-scope finalized bindings map. `findCallableBindingInScope`
then picks them up via its imported-bindings check.

Closes: variadic `Record(params string[])` + heritage arity
narrowing `WriteAudit`.

Python parity 204/204 on both flag paths; legacy C# 175/175 green;
4 C# parity failures remain (interface-dispatch pass + type-based
overload disambiguation).

* feat(csharp-scope): parity Unit 6e — overload disambig + interface dispatch + FLAG FLIP

Closes the final 4 parity failures (4 → 0). C# now runs the
registry-primary scope-resolution path by default — added to
MIGRATED_LANGUAGES.

Changes:
- `scope-resolution/scope/walkers.ts`: was already extended in
  Unit 6a to recognize Interface/Struct/Record/Enum as class-like
  owners (interface default methods get ownerIds).
- `scope-resolution/passes/receiver-bound-calls.ts`: build
  IMPLEMENTS edge index → emit secondary `interface-dispatch`
  CALLS edges to every implementor's same-named member when the
  primary receiver-typed edge targets an Interface method (closes
  heritage CreateUser CALLS-count test).
- `scope-resolution/passes/receiver-bound-calls.ts`: new
  `pickOverload` helper narrows multi-valued
  `membersByOwner.get(owner).get(name)` candidates by arity then
  argument types. Replaces the first-seen `findOwnedMember` lookup
  in Case 4 so receiver-typed overloaded calls pick the right def.
- `scope-resolution/passes/free-call-fallback.ts`: new
  `pickImplicitThisOverload` walks up to the enclosing class scope
  and applies the same arity + argument-type narrowing for free
  calls inside a class body (`Lookup("alice")` → `Lookup(string)`).
- `scope-resolution/workspace-index.ts`: new `membersByOwner`
  multi-valued index (`Map<owner, Map<name, Def[]>>`) preserves
  every overload alongside the existing first-seen `memberByOwner`.
- `scope-resolution/graph-bridge/node-lookup.ts` +
  `scope-resolution/graph-bridge/ids.ts`: include parameter-types
  suffix in the qualified lookup key for Method nodes. Legacy
  parse-phase encodes the type tag into the node id (`Method:f.cs:
  UserService.Lookup#1~int`); without this two same-arity overloads
  collapsed to one lookup entry and routed to the wrong graph node.
- `scope-resolution/contract/scope-resolver.ts`: new
  `collapseMemberCallsByCallerTarget` opt-in flag (was added in
  Unit 6b for member-call dedup; documented here).
- `gitnexus-shared/src/scope-resolution/reference-site.ts`: new
  `argumentTypes` field carrying inferred per-arg types.
- `scope-extractor.ts`: read @reference.parameter-types capture into
  `site.argumentTypes` and add it + the declaration-arity tags to
  KNOWN_SUB_TAGS so the anchor-detection picks the right anchor.
- `languages/csharp/captures.ts`: synthesize @reference.parameter-types
  by inferring arg types from literal AST nodes (integer_literal →
  'int', string_literal → 'string', constructor_expression →
  type-name, etc).
- `languages/csharp/scope-resolver.ts`: opt in to
  `collapseMemberCallsByCallerTarget`.
- `registry-primary-flag.ts`: **add CSharp to MIGRATED_LANGUAGES**.

Final state:
- C# parity: 175/175 green on flag-on AND flag-off.
- Python parity: 204/204 green on both flag paths (no regression).
- TypeScript clean.

51 → 0 failures across 18 commits on `feat/csharp-scope-resolution`.

* refactor(scope-resolution): extract language-specific accessor unwrap to provider hook

Optimizer pass: move C# Dictionary-family `.Values`/`.Keys` handling
out of the shared `compound-receiver.ts` (where it had hardcoded
regex + accessor names) into a provider-level
`unwrapCollectionAccessor` hook. The shared pass now takes an
arbitrary language-specific unwrap function; C# supplies its
Dictionary implementation in `languages/csharp/accessor-unwrap.ts`.

Related cleanup in `receiver-bound-calls.ts` Case 3b: replace the
hardcoded `tail === 'Values' || tail === 'Keys'` accessor check with
a try-dotted-walk-first / fall-back-to-call-form strategy. This
removes the last C#-specific branch in the shared pass and makes the
logic generalize cleanly to other languages that use property-style
accessors for collection views (Kotlin `.size`, future languages).

Changes:
- `scope-resolution/contract/scope-resolver.ts`: new optional
  `unwrapCollectionAccessor(receiverType, accessor) => string | undefined`
  hook. Documented as language-specific with examples.
- `scope-resolution/passes/compound-receiver.ts`: delete
  `extractDictionaryArgs`, accept `unwrapCollectionAccessor` via
  options, call it for trailing accessor segments.
- `scope-resolution/passes/receiver-bound-calls.ts`: plumb the hook
  through to `resolveCompoundReceiverClass`, remove the
  C#-hardcoded Case 3b accessor check.
- `languages/csharp/accessor-unwrap.ts` (new): C# Dictionary-family
  regex + element-type extraction.
- `languages/csharp/scope-resolver.ts`: opt in.

Audit outcome: everything else added across the 19 C# migration
commits is either correctly scoped to `languages/csharp/` (query,
captures, namespace-siblings, receiver-binding, interpret, imports)
or correctly generic in shared paths (argumentTypes field,
collapseMemberCallsByCallerTarget flag, overload narrowing via
parameterTypes, interface-dispatch via IMPLEMENTS edges, class-like
owner extension for Interface/Struct/Record/Enum, type-tagged node
IDs, module-scope return-type lookup fallback).

175/175 C# green on both flag paths; 204/204 Python green on both
flag paths; TypeScript clean.

* refactor(scope-resolution): gate module-scope typeBinding walk-up on hook

Add optional `hoistTypeBindingsToModule` to the ScopeResolver contract
and gate the Module-scope walk-up in `resolveCompoundReceiverClass` on
it. Only providers that hoist method return-type bindings to Module
scope (C#) opt in; Python and other providers no longer traverse that
fallback path.

Closes the architectural leak flagged in the production-readiness
review: the walk-up was unconditional and therefore widened Python's
code path despite existing only for C#.

No behavior change for C# (hook=true restores the prior lookup). No
behavior change for Python (hook undefined = walk-up skipped, matching
pre-PR behavior).

Verified:
  - npx tsc --noEmit           clean
  - C# unit suite              74/74 passing
  - C# + Python integration    388/388 passing

* refactor(csharp-scope): remove as-unknown-as double casts in scope-resolver

Tighten three type boundaries that were previously papered over with
`as unknown as` casts:

  * `CsharpResolveContext.allFilePaths`: `Set<string>` → `ReadonlySet<string>`.
    The orchestrator only hands out a read-only view; drop the widening
    cast at the resolver-adapter site.
  * `resolveCsharpImportTarget`: call passes the narrow context directly.
    `WorkspaceIndex` is `unknown` in the shared contract, so the
    `as unknown as WorkspaceIndex` cast was gratuitous — structural
    assignability covers it.
  * `csharpMergeBindings`: drop unused `_scope: Scope` parameter. The
    implementation never read it; the cast chain in `scope-resolver.ts`
    existed only to satisfy an unused slot. LanguageProvider.mergeBindings
    now wraps with a tiny arrow adapter; ScopeResolver.mergeBindings
    passes through directly.

No runtime behavior change. `grep 'as unknown as' csharp/scope-resolver.ts`
returns zero matches.

Verified:
  - npx tsc --noEmit           clean
  - C# unit + integration      462/462 passing (incl. Python integration)

* test(csharp-scope): integration fixtures for Units 6c/6d/6e runtime behavior

Close the integration-coverage gap flagged in the production-readiness
review. Units 6c (collection-accessor unwrap), 6d (using-static member
injection), and 6e (overload disambig + interface dispatch) previously
had only hook-level unit tests; the end-to-end wiring was exercised
only by the parity harness.

Three minimal fixtures + four new it() blocks:

  * csharp-collection-accessor — RenderAll iterates
    Dictionary<string, Widget>.Values and calls .Render(); asserts the
    CALLS edge lands on Widget.Render.
  * csharp-using-static — `using static Helpers.MathUtils;` makes
    Square(int) a free-callable in the consumer; asserts the CALLS
    edge lands on MathUtils.Square.
  * csharp-overload-interface — three assertions:
      1. Run → Log binds to the 2-arg overload only (arity narrowing);
         verified via target Method node's parameterTypes.length === 2.
      2. Run → Greet emits one primary edge to IGreeter.Greet plus two
         reason='interface-dispatch' siblings to En/FrGreeter.Greet.
      3. Interface-dispatch fan-out excludes the primary target.

Verified:
  - csharp integration        189/189 passing

* docs(scope-resolution): de-c#-ify optional-hook doc-comments on contract

Rewrite the doc-comments on four optional hooks so they describe the
behavior and when a provider would enable it, rather than naming C#
as the sole consumer. Hook names were already generic — only the
comments had baked in one-language framing, which risked discouraging
future reuse.

Affected hooks:
  * unwrapCollectionAccessor
  * collapseMemberCallsByCallerTarget
  * populateNamespaceSiblings
  * hoistTypeBindingsToModule

Language-specific rationale stays where it belongs — next to the hook
assignment in `languages/csharp/scope-resolver.ts`. Zero-match grep for
`C#|csharp|CSharp` in the contract file confirms the separation.

No code change.

* docs(csharp-scope): justify regex-based namespace-sibling detection

Record why `namespace-siblings.ts` uses regex over AST walks and
enumerate the known misses so the next reader has ground to stand on:

  * `global using static X.Y;` — no plain `using static` token.
  * Aliased `using static X = Y.Z;` — `=` breaks the pattern.
  * Attributed namespace declarations between `]` and `{`.
  * Multi-namespace files — first-wins attribution.
  * Preprocessor-gated namespace declarations — textual branch only.

Rationale: the pass is file-path-driven and the tree-sitter tree isn't
available at its call site (the orchestrator feeds raw fileContents);
re-parsing to count namespaces would cost more than the regex walk.
Refactor to AST-driven detection is deferred to a separate PR.

Mirrored the known-miss list into `csharp/index.ts`'s limitations
ledger so the operator-visible surface and the in-code justification
stay in sync.

No code change.

* refactor(csharp-scope): AST-driven namespace detection with treeCache reuse

Replace regex-over-source-content with tree-sitter AST walks in
namespace-siblings.ts; thread the orchestrator's treeCache through
the populateNamespaceSiblings hook so the pass reuses the same parse
trees `extractParsedFile` already consumed (single-source-of-truth
for the AST — no double-parse).

Behavior gains (no longer "known misses"):
  * `global using static X.Y;` is now detected.
  * Aliased `using static X = Y.Z;` is now detected.
  * Attributed namespace declarations (`[attr] namespace X`) parse
    correctly because tree-sitter sees them as one node.
  * Preprocessor-gated namespace declarations parse via the grammar.

Contract change (additive, optional):
  * `populateNamespaceSiblings` ctx now carries an optional
    `treeCache?: { get(filePath): unknown }`. Existing providers that
    don't set it on `RunScopeResolutionInput` see undefined, and the
    hook falls back to a fresh parse (current behavior preserved on
    cache miss).

Limitation ledger updated in csharp/index.ts: the AST-based detection
removes 4 of the 5 prior known misses; only "first-wins multi-namespace
file attribution" remains.

Verified:
  - npx tsc --noEmit                         clean
  - C# + Python integration                  393/393 passing

* refactor(python-scope): remove as-unknown-as casts in scope-resolver (mirrors Unit 2)

Replay the C# scope-resolver cleanup on the Python side so both
providers share a single clean pattern:

  * Drop `ws as unknown as WorkspaceIndex` — `WorkspaceIndex` is
    `unknown` in the shared contract, so the narrow context assigns
    structurally without a cast.
  * Drop `{ id: scopeId } as unknown as Scope` — `pythonMergeBindings`
    never read the scope (the parameter was `_scope`), so the stub
    was a type-only ghost. Signature is now `(bindings)` and the
    LanguageProvider slot wraps with an arrow adapter.
  * Drop `allFilePaths as Set<string>` — the orchestrator hands a
    `ReadonlySet<string>`; we copy it into a `Set` at the resolver
    adapter so the legacy downstream `resolvePythonImportInternal`
    chain (typed for mutable `Set<string>`) keeps working. The copy
    is O(N) once per import, trivial cost.

Left intact on purpose: the `(callsite, def) → (def, callsite)`
arrow wrapper on `arityCompatibility`. That's a documented shape
difference between `LanguageProvider.arityCompatibility(def, callsite)`
and `ScopeResolver.arityCompatibility(callsite, def)`; both providers
(Python + C#) carry the same wrapper. Reconciling is a separate
refactor across both contracts.

No runtime behavior change.

Verified:
  - npx tsc --noEmit                              clean
  - Python + C# unit + integration suites         529/529 passing

* docs(scope-resolution): document I1-I8 invariants, source-of-truth, and same-graph guarantee

Promote contract knowledge that was implicit in code into the canonical docs
so future migrations and the next reviewer don't have to reverse-engineer it.

contract/scope-resolver.ts:
  * Migration cookbook lists every optional hook (was: only the two
    booleans), with one-line guidance per hook including when to enable
    `hoistTypeBindingsToModule`.
  * Contract Invariants I1-I7 are now spelled out in full (was: only
    I1/I3/I5 summarized with a pointer to a plan file). Added new I8
    "post-finalize hooks may mutate Scope.typeBindings and indexes.bindings;
    consumers must not freeze or snapshot before all post-finalize hooks
    have run".
  * New "Semantic-model source of truth" section: ParsedFile is the
    single semantic model; passes that need AST-level facts must reuse
    the orchestrator's treeCache rather than re-parse.
  * New "Same-graph guarantee" section: legacy DAG and scope-resolution
    emit indistinguishable edges (node identity, edge vocabulary,
    confidence). CI parity workflow enforces this.

gitnexus-shared/src/scope-resolution/parsed-file.ts:
  * Added "Source-of-truth invariant" pointer paragraph.

ARCHITECTURE.md (Coexistence section):
  * Updated migrated-language list (Python + C#).
  * Added "Same-graph guarantee" subsection.
  * Added "Semantic-model source of truth" subsection.
  * Filled in the ScopeResolver hook table with the five optional hooks
    that landed in this branch (unwrapCollectionAccessor,
    collapseMemberCallsByCallerTarget, populateNamespaceSiblings,
    hoistTypeBindingsToModule, fieldFallbackOnMethodLookup).
  * Added C# rows to the code-references table.

Verified:
  - npx tsc --noEmit                                 clean
  - C# + Python integration                          393/393 passing

* refactor(scope-resolution): consume SemanticModel as single authoritative store

Unify scope-resolution and legacy parse into one symbol index per the
industry pattern (Roslyn / tsc / rust-analyzer). Scope-resolution
passes now consume `SemanticModel.methods` / `SemanticModel.fields` /
`SemanticModel.symbols` for all symbol-keyed lookups. The legacy DAG
already read from these; the drift — two parallel owner-keyed indexes
populated by two writers with divergent ownerId semantics — is closed.

Changes:

  * `MethodRegistry.lookupAllByOwner(owner, name)`: new API returning
    every overload without arity narrowing. Powers `findOwnedMember` /
    `pickOverload`.

  * `pipeline/run.ts` reconciliation pass: after
    `provider.populateOwners(parsed)`, iterate `parsed.localDefs[i]`
    and register methods/fields into the SemanticModel under the
    corrected ownerId. Idempotent — skips defs already present under
    `(ownerId, simple)` by nodeId, so unmigrated languages whose
    legacy extractor already set ownerId (C#) don't double-register.
    Closes the Python gap where class-body methods were invisible to
    `MethodRegistry` because the legacy Python method extractor
    couldn't resolve `enclosingClassId` at parse time.

  * `WorkspaceResolutionIndex` slimmed to Scope-valued maps only
    (`classScopeByDefId`, `moduleScopeByFile`). Dropped `memberByOwner`,
    `membersByOwner`, `defsByFileAndName`, `callablesBySimpleName` —
    all symbol-keyed duplicates of SemanticModel indexes.

  * Walker helpers now consume SemanticModel:
      - `findOwnedMember(owner, name, model)` → methods then fields
        fallback (ACCESSES writes target Property/Variable defs too).
      - `findExportedDefByName` fallback walks every Module scope's
        `origin === 'local'` bindings via `index.moduleScopeByFile`
        (preserves the module-export-visibility filter that
        SymbolTable.fileIndex can't cheaply encode).
      - `findExportedDef` reads `moduleScope.bindings` directly.

  * `pickOverload` in receiver-bound-calls.ts falls back to
    `model.fields.lookupFieldByOwner` when method lookup returns empty,
    fixing ACCESSES write edges that receive a Property target.

  * `phase.ts` threads `resolutionContext.model` into
    `RunScopeResolutionInput`.

Boundary rule, enforced by file placement:
  - symbol-indexed lookups (key = nodeId / name / filePath) →
    `SemanticModel`
  - Scope-valued lookups (value = `Scope`) →
    `WorkspaceResolutionIndex`

Research synthesized from web-researcher + Explore + best-practices +
system-architect agents; canonical references: Roslyn Overview,
rust-analyzer architecture, stack-graphs paper.

Verified:
  - npx tsc --noEmit                               clean
  - C# + Python integration                        393/393 passing

* docs(scope-resolution): refresh comments after dropping duplicated indexes

Replace references to the now-deleted `memberByOwner` /
`callablesBySimpleName` index fields with comments that describe the
actual lookup path (`SemanticModel` registries + scope-tied module
bindings). Pure doc cleanup; no behavior change.

* feat(scope-resolution): extract reconciliation pass + add parity validator

Extract the SemanticModel reconciliation pass (previously inline in
`pipeline/run.ts`) into a dedicated module with:

  * `reconcileOwnership(parsedFiles, model)` — pure function returning
    stats (methodsRegistered / fieldsRegistered / skippedAlreadyPresent).
    Idempotent; safe to re-run.
  * `validateOwnershipParity(parsedFiles, model, onWarn)` — dev-mode
    runtime validator for Contract Invariant I9. Walks every def with
    an `ownerId` and asserts it is reachable via
    `model.methods.lookupAllByOwner` or `model.fields.lookupFieldByOwner`.
    Soft-fails via `onWarn`; never throws.

Validator is gated on both `NODE_ENV !== 'production'` and
`VALIDATE_SEMANTIC_MODEL !== '0'` so production incurs zero cost but
development surfaces any drift between `parsed.localDefs` ownership and
the registries.

12 new unit tests cover:
  * happy path: method, property, Variable registration
  * edge case: defs without ownerId are skipped
  * idempotency: second call is a no-op
  * coexistence: defs the legacy extractor already registered (via
    `model.symbols.add`) are skipped on reconcile
  * overloads: multiple methods under the same (owner, name)
  * validator: no warnings after reconciliation
  * validator: warns on drift
  * validator: no-op under NODE_ENV=production
  * validator: no-op when VALIDATE_SEMANTIC_MODEL=0
  * validator: warns on missing Property same as missing Method

Verified:
  - npx tsc --noEmit                               clean
  - reconcile-ownership unit tests                 12/12 passing
  - C# + Python integration                        393/393 passing

* refactor(scope-resolution): narrow handles + tighten required params

Two small hygiene fixes that fell out of the unified-model work:

  * Introduce `readonlyModel: SemanticModel` in `runScopeResolution`
    immediately after reconciliation so the write/read phase boundary
    is explicit at the code level. Downstream passes (receiver-bound,
    free-call) receive the narrowed `SemanticModel` rather than the
    `MutableSemanticModel` that only the reconciliation pass needs.
    The type system now rejects accidental writes in the read phase.

  * Make `emitFreeCallFallback`'s `workspaceIndex` parameter required.
    It's now always passed (every caller threads it through), and the
    `workspaceIndex?` guard was dead code. Also drops the `| undefined`
    branch from `pickConstructorOrClass` which no caller can hit.

No behavior change.

* docs(semantic-model): document unified single-source-of-truth invariant (I9)

Add Contract Invariant I9 to the ScopeResolver contract and write the
single-source-of-truth + write/read phase contract into both the
SemanticModel file-head and ARCHITECTURE.md.

Three landing points so the rule is reachable from every entry:

  * contract/scope-resolver.ts — new I9 entry in the Contract
    Invariants list: scope-resolution passes consult SemanticModel
    exclusively for symbol-keyed lookups; WorkspaceResolutionIndex is
    reserved for Scope-valued maps. Documents the two-phase write
    (legacy parse + reconcileOwnership) and the narrowed-handle read
    posture. Calls out the reconciliation shim as transitional.

  * model/semantic-model.ts — new "Single-source-of-truth invariant"
    and "Write / read phase contract" sections in the file-head.
    Three ordered write phases (parse → reconcile → attachScopeIndexes),
    then frozen for readers.

  * ARCHITECTURE.md § "Semantic-model source of truth" — expanded
    subsection covering both invariants (ParsedFile = AST truth,
    SemanticModel = symbol truth), the write/read phase diagram, and
    the reconciliation-shim rationale.

No code change.

* test(scope-resolution): rewrite workspace-index test for slimmed index

The test file previously asserted on \`defsByFileAndName\`,
\`callablesBySimpleName\`, and \`memberByOwner\` — fields removed when
symbol-keyed lookups moved to \`SemanticModel\`. Rewrite so the same
invariants are asserted via the authoritative consumers:

  * New WorkspaceResolutionIndex shape test (scope-only maps).
  * \`findExportedDef\` module-export visibility tests:
    - keeps top-level class and function defs.
    - excludes class-body Variable defs (MAX_USERS = 100).
    - excludes class methods from module-export lookup.
  * \`findExportedDefByName\` fallback excludes class methods when a
    same-named module function exists.
  * \`findOwnedMember\` via the reconciled SemanticModel finds Python
    class methods after populateOwners + reconcileOwnership.

Total assertions preserved: every invariant from the old test file is
still pinned; the assertion surface shifted from the index shape to
the walker helpers.

Verified:
  - workspace-index.test.ts                        8/8 passing

* fix(tests): update registry-primary-flag test for C# migration

The "returns exactly the flipped languages" case expected `enabled.size === 1`
after toggling Python off and Go on. After the C# migration lands C# in
MIGRATED_LANGUAGES, C# is default-on too — so the size is now 2 (Go + C#)
unless C# is also opted out.

Turn off C# alongside Python in the test setup. Added a comment noting
that future migrations must add their REGISTRY_PRIMARY_<LANG>='false'
line here.

* refactor(scope-resolution): address PR #1019 review findings

Resolves all 5 findings from the automated review on
feat/csharp-scope-resolution. Shared ingestion code stays
language-agnostic; C# (and every class-like language) benefits.

F1 [high] Broaden class-like predicate
  Hoist `isClassLike` in `scope/walkers.ts` to an exported top-level
  helper covering Class | Interface | Struct | Record | Enum | Trait.
  Use it in `findClassBindingInScope`, `findEnclosingClassDef`, and
  `buildWorkspaceResolutionIndex` so C# records, structs, interfaces,
  and enums participate in scope chains and receiver binding the same
  way Python classes do.

F2 [medium] Remove stale comment in csharp simple-hooks
  `csharpReceiverBinding`'s doc claimed this/base synthesis was
  "planned for a follow-up"; synthesis has been implemented in
  receiver-binding.ts since the migration landed. Rewrite the doc to
  describe the actual behavior (non-null TypeRef on instance-method
  bodies, null on static/free functions).

F3 [medium] O(1) reverse lookup for classScopeId -> classDefId
  Add `classScopeIdToDefId: ReadonlyMap<ScopeId, string>` to
  `WorkspaceResolutionIndex`, populated as the inverse of
  `classScopeByDefId`. Replace the O(C) linear scan in
  `pickImplicitThisOverload` (free-call-fallback.ts) with an O(1)
  `Map.get` — turns per-site reverse resolution from linear in class
  count to constant time for every free call.

F4 [low] Extract narrowOverloadCandidates shared utility
  New `passes/overload-narrowing.ts` centralizes the arity + argument-
  type narrowing previously duplicated across `pickOverload`
  (receiver-bound-calls.ts) and `pickImplicitThisOverload`
  (free-call-fallback.ts). Both callsites now share identical
  narrowing semantics; variadic `params T` handling is preserved.
  Return type is `readonly SymbolDefinition[]` with no defensive
  spreads (allocations saved on the hot path).

F5 [low] Merge unreachable Case 5 into Case 2
  `Case 5` in `receiver-bound-calls.ts` was dead code — `Case 2`
  pre-empted it for every static/class-name receiver. Delete Case 5
  and lift its kind-aware read/write ACCESSES reason/confidence logic
  into Case 2 so static-style member access (e.g. `Interface.Member`,
  `TypeName.StaticMember`) gets the correct edge metadata.

Tests
  - New unit tests for `narrowOverloadCandidates` covering empty
    input, arity filtering, variadic params, type narrowing, and
    fallback semantics.
  - New unit tests for `classScopeIdToDefId` verifying inverse
    invariant and empty index behavior.
  - New C# integration fixtures and tests:
      * csharp-record-base — record inheritance + `base.Save()`
      * csharp-struct-overloads — struct with implicit-this overload
        narrowing (pinned exact edge count under registry-primary)
      * csharp-interface-receiver-static — interface-qualified static-
        style call exercises the merged Case 2.
  - Full runs green:
      * scope-resolution unit: 406/406
      * csharp integration (registry-primary): 197/197
      * csharp integration (legacy DAG): 197/197
      * python integration (regression guard): 204/204

Chore
  - Add `.context/` to root `.gitignore` to prevent agent scratch
    files from being committed.

Made-with: Cursor

* test(csharp-scope-resolution): address adversarial review follow-ups on PR #1019

Applies the three actionable follow-ups from the post-commit adversarial
review of 5a1bce7f against DoD.md. No runtime code changes.

- [medium] Strengthen bounds-only assertion in the struct-overloads
  suite: `methods.length` is now pinned to `toBe(2)` and the arity list
  to `toEqual([1, 2])`. Fixture `csharp-struct-overloads/src/Calc.cs`
  declares exactly two `Add` methods, so a regression that adds, drops,
  or merges an overload will now fail the test instead of silently
  passing a `>= 2` gate.

- [low] Pin the merged Case 2 kind-aware branch (receiver-bound-calls.ts
  lines 257-289) with a dedicated fixture and three new assertions:
  `csharp-class-static-field-access/src/Counters.cs` exercises
  `ClassName.Field = value` where the receiver resolves via
  `findClassBindingInScope` (no typeBinding on `Counters`). The test
  verifies (a) two distinct ACCESSES writes are emitted from a single
  method (per-site dedup from graph-bridge/edges.ts:80-87),
  (b) `reason === 'write'`, (c) `confidence === 1.0`, and (d) no
  spurious CALLS edges are produced for the same sites. This is the
  semantic upgrade lifted from the deleted Case 5; without a pinning
  test a future revert of the kind-aware branch would silently drop
  back to `import-resolved`/`global` at 0.85 for the same sites.
  Read-side coverage is intentionally not asserted because the C#
  tree-sitter query currently emits only `write.member` captures
  (languages/csharp/query.ts:485-501) — a read counterpart would have
  no reference site today and would give a false sense of coverage.

- [info] Left the `?? overloads[0]` fallback in place at
  receiver-bound-calls.ts:450 unchanged. With the package's current
  tsconfig (strict: false, no noUncheckedIndexedAccess) both the
  defensive fallback and a `candidates[0]!` assertion type-check
  identically, so the finding has no production-readiness impact.
  Keeping the fallback minimizes churn.

Validation (local, Windows PowerShell):
- `npx prettier --check test/integration/resolvers/csharp.test.ts` -> clean
- `npx tsc --noEmit` -> 0 errors
- `REGISTRY_PRIMARY_CSHARP=1 npx vitest run test/integration/resolvers/csharp.test.ts` -> 200/200
- `REGISTRY_PRIMARY_CSHARP=0 npx vitest run test/integration/resolvers/csharp.test.ts` -> 200/200
- `npx vitest run test/integration/resolvers/python.test.ts` -> 204/204
- `npm test` (full gitnexus suite) -> 6967 passed, 6 pre-existing failures
  (4x Swift overload/dedup, 1x Swift method-extraction unit, 1x Swift
  type-env unit, 1x LadybugDB lockfile on Windows). All six reproduce on
  5a1bce7f with these follow-up changes stashed, confirming they are
  environment/baseline failures unrelated to this work. Swift is not in
  MIGRATED_LANGUAGES so the merged Case 2 path cannot affect it.

Refs: PR #1019
Made-with: Cursor

* refactor(scope-resolution): address full-PR review findings on PR #1019

Resolves the two remaining findings from the code-review-swarm full-PR
sweep (verdict: production-ready with minor follow-ups).

[low] Complete the csharp/index.ts module-layout JSDoc.

`languages/csharp/index.ts` is the discovery surface for the C# scope-
resolution module decomposition (per AGENTS.md). The "Module layout"
list silently omitted three load-bearing modules — `accessor-unwrap.ts`
(`.Values`/`.Keys` receiver-type unwrap), `namespace-siblings.ts`
(AST-driven cross-file implicit-namespace visibility), and
`receiver-binding.ts` (`this`/`base` type-binding synthesis). Extended
the JSDoc list so the "single-concern" decomposition story is honest
and the next contributor can locate the right file without grep.
No behavior change.

[info] Replace the non-standard `'scope-resolution: super-receiver'`
      edge reason with the canonical `'global'` tier.

`passes/receiver-bound-calls.ts` emitted a non-canonical reason string
for the super/base branch, which falls outside the vocabulary declared
in ARCHITECTURE.md § Scope-Resolution Pipeline (`'import-resolved' |
'global' | 'local-call' | 'same-file' | 'interface-dispatch' | 'read'
| 'write'`). Super/base calls resolve through the MRO chain rather
than through import directives, so the correct canonical tier is
`'global'` (same classification the legacy DAG's `toResolveResult`
applies to non-same-file, non-import-scoped resolutions).

Locked the contract with `rel.reason === 'global'` assertions on the
existing `csharp-super-resolution` and `csharp-generic-parent-
resolution` suites, both of which go through the super-branch MRO
path. The `csharp-record-base` suite intentionally does not pin a
reason (records don't currently emit EXTENDS edges, so the MRO lookup
misses and the edge is produced by the reference-index fallback
instead of the super-branch). A code comment flags the pre-existing
Python-legacy asymmetry (Python legacy tier classifier marks
`super()` as `'import-resolved'` because the ancestor arrives via an
`import` statement); closing that gap requires realigning the legacy
tier classifier and is tracked separately.

Validation:
- `npx tsc --noEmit` passes.
- `npx prettier --check` clean on all four touched files.
- `test/integration/resolvers/csharp.test.ts` — 200/200 under both
  `REGISTRY_PRIMARY_CSHARP=0` (legacy DAG) and `REGISTRY_PRIMARY_CSHARP=1`
  (registry-primary), preserving same-graph parity on the super branch.
- `test/integration/resolvers/python.test.ts` — 204/204 under both
  `REGISTRY_PRIMARY_PYTHON=0` and `=1`.
- `test/unit/scope-resolution/` — 406/406 passing.

Unstaged: `gitnexus/package-lock.json` (drift from `npm install` run
to resolve the pre-existing missing `jsonc-parser` dependency — not
part of this change).

Made-with: Cursor

* test(ci): raise integration-test timeouts so slow Windows runners stop flaking

The `windows-latest` CI runner for this branch was consistently failing
two integration suites in ways that had nothing to do with the PR's
scope-resolution changes:

  * `cli-e2e.test.ts` — `analyze command runs pipeline on mini-repo`
    hit the default 30 s vitest test timeout, which raced the test's
    own 30 s subprocess timeout and prevented the existing
    `if (result.status === null) return;` slow-CI tolerance from ever
    firing. That single timeout then cascaded into the downstream
    `cypher`/`query`/`impact` tests (which exited non-zero because the
    mini-repo was never indexed) and the `EPIPE handling` test.
  * `skills-e2e.test.ts` — `beforeAll` hooks run a full
    `runSkillsCli(tmpDir)` subprocess that analyzes a fixture repo and
    generates skills. 50 s was enough on Linux/macOS but not on slow
    Windows CPUs, producing "Hook timed out in 50000ms" errors and
    cascading test failures across every language describe block.

Fix:
  * Bump the `analyze` test's vitest test-level timeout to 60 s so it
    exceeds the 30 s subprocess timeout and the slow-CI tolerance can
    actually activate.
  * Bump all 12 `runSkillsCli`-driven `beforeAll` hooks from 50 s to
    120 s.

No production-code behavior changes. No change to what the tests
assert — only the per-test/hook wall-clock budget.

Made-with: Cursor
2026-04-23 12:38:13 +01:00
Copilot
ff4ae89aaa
feat(python): scope-based call resolution + registry-primary flip + perf + generalization (RFC #909 Ring 3) (#980)
* Initial plan

* plan: Python scope-based resolution migration

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* feat(python): scope-based resolution provider hooks + 62 tests

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* refactor(python): split scope-hooks monolith into focused modules

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* test(python): integration-style scope-resolution tests + suffixResolve fallback

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* wire python scope-based resolution end-to-end (initial pass)

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* keep legacy IMPORTS for python (heritage needs importMap), scope phase owns CALLS only

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* test(python): remove parallel scope-resolution integration test

The new test/integration/python-scope-resolution.test.ts duplicated coverage
the reviewer explicitly rejected. The existing
test/integration/resolvers/python.test.ts (191 tests, driven by
runPipelineFromRepo) is the source of truth for Ring 3 parity.

Also document the IMPORTS-emission follow-up gap: wiring emitImportEdges
in python-scope-emit.ts today regresses 10 IMPORTS-edge fixtures because
the scope-extractor's ImportEdge coverage is narrower than legacy
pythonImportConfig.importResolver. Tracked as a follow-up.

Baseline with REGISTRY_PRIMARY_PYTHON=1 is unchanged: 109/191 pass.

* feat(ingestion): scope-resolution phase owns Python IMPORTS edges (RFC #909 Ring 3)

When `REGISTRY_PRIMARY_PYTHON=1`, IMPORTS graph edges for Python files are now
emitted exclusively by the new scope-resolution path. The legacy
`import-processor` still runs — heritage resolution needs its importMap /
namedImportMap / moduleAliasMap population — but its graph edge emission is
gated per-language so Python no longer double-emits.

This closes the reviewer's second change request on PR #980: "the legacy path
must be turned off". Legacy IMPORTS edges for Python are now off by default
when the flag is enabled.

Three bugs were fixed to make the new path's coverage match legacy:

1. **Root-file bailout** (import-resolvers/python.ts): `resolvePythonImportInternal`
   returned null immediately when the importer file lived at the repo root
   (importerDir === ''). The ancestor directory walk further down already
   handles this case correctly; the early return was the bug. Proximity check
   now only runs when importerDir is non-empty, and the ancestor walk sees
   root-level files for the first time.

2. **External dotted imports** (languages/python/import-target.ts): the new
   path fell straight through to `suffixResolve` for multi-segment imports,
   which happily matched `django.apps` to a local `accounts/apps.py`. Mirror
   `pythonImportStrategy`'s `hasRepoCandidate` guard — suffix-match only when
   the leading segment exists somewhere in-repo as a package, __init__.py,
   or namespace directory.

3. **suffixResolve ambiguity** (languages/python/import-target.ts): the
   shared `suffixResolve` helper requires a pre-built `SuffixIndex` to
   disambiguate ties. Without one it falls back to an O(files) scan that
   silently picks the first match when the last segment collides across
   directories (e.g. `accounts.models` matching `billing/models.py`).
   Replaced with `resolveAbsoluteFromFiles` — exact lookup first, then a
   deterministic suffix match.

Validation:
- Flag OFF: 191/191 pass (no regression).
- Flag ON: 109/191 pass (82 fail — exact baseline match; remaining 82 are
  unchanged CALLS-edge provider-feature gaps tracked as Phase B follow-ups).
- `tsc --noEmit`: clean.

The 82 CALLS failures cluster into 44 describe blocks covering type-inference
features (assignment chains, walrus, class-level annotations, constructor
inference, C3 MRO, overload dispatch, return-type inference) that need
dedicated Ring 3 follow-up work. Each cluster is tracked against the RFC #909
shadow-parity gate (>=99% fixtures / >=98% corpus) in the per-language ticket.

* ci(scope-resolution): automatic parity gate driven by MIGRATED_LANGUAGES

Adds the Ring 3 parity gate the RFC §6.4 requires: when a language's
scope-resolution migration is marked complete, CI runs its resolver
integration test twice on every PR (once with the legacy DAG, once with
the registry-primary path) and both must pass.

The "is this language migrated" signal is a single TypeScript constant:

  // gitnexus/src/core/ingestion/registry-primary-flag.ts
  export const MIGRATED_LANGUAGES: ReadonlySet<SupportedLanguages> =
    new Set([ /* SupportedLanguages.Python when ready */ ]);

Adding a language here has three simultaneous effects:

  1. `isRegistryPrimary(lang)` defaults to true for that language in
     production (env-var override still wins if set explicitly).
  2. `.github/workflows/ci-scope-parity.yml` auto-discovers the set via
     `npx tsx scripts/ci-list-migrated-languages.ts`, builds a parity
     matrix, and runs:
       - `REGISTRY_PRIMARY_<LANG>=0 npx vitest run resolvers/<slug>.test.ts`
       - `REGISTRY_PRIMARY_<LANG>=1 npx vitest run resolvers/<slug>.test.ts`
     Both legs must pass for the job to succeed.
  3. Legacy-path gating in call-processor.ts / import-processor.ts kicks
     in automatically through the same `isRegistryPrimary` lookup.

No JSON registry, no manual workflow edit, no second source of truth —
contributors update the Set and CI picks it up. Empty Set = parity job
is a skipped matrix (workflow still reports success).

The new `scope-parity` reusable workflow is added to ci.yml's `needs`
graph and ci-status gate. Its result must be `success` (skipped would
mean upstream discover job failed and should block).

Validation (with empty MIGRATED_LANGUAGES set):
- flag OFF: 191/191 pass (no behavior change)
- flag ON (manual REGISTRY_PRIMARY_PYTHON=1): 82 fails = baseline exact match
- `npx tsc --noEmit`: clean
- concurrency-convention script: pass
- tsx discovery script: emits `[]` correctly

* ci(scope-resolution): keep MIGRATED_LANGUAGES empty; fix linter auto-uncomment

Previous commit's example entry got auto-uncommented (linter preferred a
type-checkable `SupportedLanguages.Python` over a commented-out reference).
That would have triggered the parity CI gate against Python, which today
has 82 known flag-on failures — unintended and would block the PR.

Use the explicit generic `new Set<SupportedLanguages>([])` so an empty set
still type-checks without needing an uncommented-out sample member.
Example in the comment now has `//   SupportedLanguages.Python,` so it
remains illustrative without participating in the set.

* feat(python): capture constructor-inferred + annotated type bindings

Extends the Python scope-extractor with two new type-binding capture
patterns so receiver-typed method dispatch has concrete type bindings
to work from:

1. `u: User = ...` / `u: User` — variable annotations. `@type-binding.annotation`
   anchor, `source: 'annotation'`.
2. `u = User("alice")` — assignment RHS is a bare-identifier call (Python
   has no `new` keyword; constructor-shaped calls are syntactically
   identical to function calls). `@type-binding.constructor` anchor,
   `source: 'constructor-inferred'`.

The runtime query lives in `query.ts` (the `.scm` file is documentation
per the comment at its top); both are updated.

Fixes 19 failures across these resolver fixtures (flag-on 82 → 63):
- Python constructor-inferred type resolution (3)
- Python class-level annotation resolution (3)
- Python nullable receiver resolution (3)
- Python member-call / receiver-constrained / constructor-call (3)
- Python assignment chain propagation (2)
- Python walrus / match-case / chained method (3)
- Python member access iterable for-loop (2)

* feat(python): strip nullable unions + prefer annotations over inference

Two linked changes that together fix the 4 nullable-receiver tests:

1. `stripNullable` in Python's `interpretTypeBinding` unwraps `User | None`,
   `None | User`, and `Optional[User]` to `User`, so receiver-typed
   resolution treats nullable receivers identically to non-nullable ones.
   Three-arm unions (`User | Error | None`) are left unchanged — truly
   ambiguous for single-receiver inference.

2. Source-strength ordering in `pass4CollectTypeBindings`. When multiple
   matches fire for the same bound name in the same scope — e.g. the
   `u: User = find()` idiom where both the annotation and
   constructor-inferred patterns match — the explicit annotation now
   wins regardless of query-match arrival order. Rank:
     explicit (annotation / parameter-annotation / return-annotation / self) > inferred

Also reorders the two Python patterns in query.ts / scopes.scm so the
constructor-inferred pattern appears first — a belt-and-braces fallback
that keeps behavior deterministic if the shared priority ranking is ever
revisited.

Fixes 4 failures (flag-on 63 → 59):
- Python nullable receiver resolution (4 tests)

Flag-off regression check: 191/191 still pass.

* feat(python): walrus, qualified-call, match-case type bindings

Extends the constructor-inferred family of captures with three more
assignment-shaped patterns that all bind a variable to a class-like type:

- Walrus: `(u := User(...))` → `u: User` via `(named_expression)`.
- Qualified call RHS: `u = models.User(...)` → `u: models.User` via
  `(attribute)` node .text. Falls through resolveTypeRef Phase 2
  (QualifiedNameIndex dotted fallback).
- Match as-pattern: `case User() as u:` → `u: User` via `(as_pattern)`
  + `(class_pattern (dotted_name))`.

Fixes 2 failures (flag-on 59 → 57):
- Python walrus operator type inference
- Python match/case as-pattern type binding

Qualified-call constructor tests still fail because they require
cross-module qualifiedName registration (models.User → models.py's User
class) which isn't yet wired in the Python extractor. Tracked as
follow-up alongside module-import CALLS (#337) resolution.

* feat(python): chain type bindings + strip list[T] generic for for-loop

Adds two capture patterns and a shared transitive-closure pass that
together handle Python's variable-aliasing and for-loop-over-typed-
iterable patterns:

1. `(assignment left: (identifier) right: (identifier))` — `alias = u`.
2. `(for_statement left: (identifier) right: (identifier))` — `for u in users`.

Both emit `@type-binding.alias` with the RHS identifier as rawName. The
shared `pass4CollectTypeBindings` now runs a final transitive-closure
walk that follows identifier-chain TypeRefs through the declaring scope
and its ancestors (depth-capped, cycle-guarded) so `alias` ultimately
points at the class type instead of another local variable name.

Generic stripping in `interpret.ts` unwraps single-arg collection
wrappers — `list[User]`, `set[User]`, `Iterable[User]`, etc. — to the
element type. Multi-arg generics (`dict[str, User]`, `Callable[...]`)
are left alone; their semantics aren't unambiguous.

Fixes 8 failures (flag-on 57 → 49):
- Python assignment chain propagation (4)
- Python nullable + assignment chain (2)
- Python walrus operator (:=) assignment chain (2)

Flag-off still 191/191.

* feat(python): namespace & class receiver resolution + file-level caller fallback

Adds a Python-specific post-resolution pass `emitReceiverBoundCalls`
that closes two receiver gaps the shared `MethodRegistry.lookup` doesn't
cover:

1. **Namespace receivers** — `import models; models.User()` /
   `import models as m; m.User()`. The shared `lookupReceiverType` only
   walks `scope.typeBindings`; namespace imports never land there
   (they're filtered out of `scope.bindings` when the target module
   has no self-named def, per `finalize-algorithm.ts:540`). The new
   pass walks `indexes.imports` directly, builds a per-file
   `localName → targetFilePath` map, and emits CALLS/ACCESSES edges
   against the target file's `localDefs`.

2. **Class-name receivers** — `Dog.classify("dog")`. The shared resolver
   requires typeBindings; class bindings in `scope.bindings` are never
   consulted as receivers. The new pass checks class-kind bindings in
   the call scope's chain and resolves members via `ownerId`.

Also fixes module-level call attribution: `resolveCallerGraphId` now
falls back to the File node id (`generateId('File', filePath)`) when no
enclosing function/method/class is found. Matches legacy DAG behavior
for module-scope calls like `u = models.User()` at the top of app.py.

Fixes 4 failures (flag-on 49 → 45):
- Python module import CALLS resolution (Issue #337) (4 of 7)

Flag-off still 191/191.

* feat(python): dotted-typebinding receiver resolution

Adds case 3 to `emitReceiverBoundCalls`: when a receiver's typeBinding
has a dotted rawName like `u: models.User` (the constructor-inferred
form fired by `u = models.User(...)`), walk the namespace map + target
file's defs to find the class, then look up the member via ownerId.

`resolveTypeRef`'s QualifiedNameIndex fallback can't cover this because
the target class's qualifiedName in models.py is just `"User"`, not
`"models.User"` — the dotted form only exists in the call-site file's
receiver expression. This pass bridges that gap without modifying the
shared registry.

Fixes 9 more failures (flag-on 45 → 36):
- Python qualified constructor inference (2)
- Python module import CALLS resolution (Issue #337) (3)
- (cluster overlap — several downstream tests in assignment/nullable/
  walrus that propagate through qualified-ctor bindings also benefit)

Flag-off still 191/191.

* feat(python): consult finalized bindings for receiver resolution

`findClassBindingInScope` now walks BOTH:
  1. `scope.bindings` — pre-finalize local declarations (origin: 'local')
  2. `indexes.bindings` — post-finalize cross-file imports/namespaces

Without (2) we were blind to any class brought in via
`from models import Dog` at the call site's file, because the
scope-extractor's Pass 2 only populates local bindings and the
cross-file finalize produces a separate bindings map that never lands
on `scope.bindings`.

Case 2 (`Dog.classify()`) now walks MRO so inherited static/class
methods resolve — `Dog.classify()` where `classify` lives on `Animal`.

Case 4 (simple typeBinding like `u: U` from aliased import) now uses
`findClassBindingInScope` instead of the shared `resolveTypeRef`,
because `resolveTypeRef`'s `ctx.scopes` only sees pre-finalize local
bindings too.

Fixes 4 more failures (flag-on 36 → 32):
- Python method enrichment > Dog.classify static (1)
- Python static/classmethod class-as-receiver (2)
- Python alias import resolution (1)

Flag-off still 191/191.

* refactor(python-scope): extract language-agnostic emit-core/

Unit 1 of the python migration architectural plan
(docs/plans/2026-04-19-001-refactor-python-migration-architectural-plan.md).

Splits python-scope-emit.ts (~945 → 481 lines) by lifting 14 generic
graph-feeding primitives into emit-core/:
  - graph-node-lookup, graph-id, emit-edge
  - emit-references, emit-imports
  - scope-walkers (findReceiverTypeBinding, findClassBindingInScope,
    findOwnedMember, findExportedDef)
  - namespace-targets, method-dispatch-bridge

Each file carries a "Next-consumer contract" JSDoc so future language
migrations (TS #927, JS #928, Java, Kotlin, Ruby) import from emit-core
rather than re-implementing. python-scope-emit.ts keeps only the four
Python-specific pieces: runPythonScopeResolution (orchestrator),
buildPythonMro, emitReceiverBoundCalls (4 cases), populateMethodOwnerIds
— these move to languages/python/emit/ in Unit 11.

Pure refactor, zero behavior change:
  - flag-off: 191/191 python.test.ts pass (identical baseline).
  - flag-on (REGISTRY_PRIMARY_PYTHON=1): 32 fail / 159 pass (identical
    baseline — the refactor neither fixes nor regresses any test).
  - tsc --noEmit clean.

* feat(python-scope): arity metadata + bind function decls in parent scope

Unit 2 of the python migration architectural plan
(docs/plans/2026-04-19-001-refactor-python-migration-architectural-plan.md).

Two changes that the registry-primary path needs before any of the
arity-sensitive failures can move:

1. Arity metadata on scope-extracted Function/Method defs.
   - New helper `languages/python/arity-metadata.ts` reuses
     `pythonMethodConfig.extractParameters` so self/cls stripping,
     defaults, and *args/**kwargs detection match legacy semantics.
   - `emit-captures.ts` synthesizes
     `@declaration.parameter-count` /
     `@declaration.required-parameter-count` /
     `@declaration.parameter-types` captures on every
     `@declaration.function` match.
   - Generic `scope-extractor.ts buildDefFromDeclarationMatch` reads
     the three optional captures into `SymbolDefinition`. Absence is
     still the no-op default for non-Python providers.

2. Hoist function/class declaration bindings to the enclosing scope.
   The "innermost scope containing the anchor" default placed
   `def greet(...)` inside greet's OWN body — invisible to other
   module-level callers, so every flag-on free-call resolved to
   `unresolved`. The hoist condition (`anchor range == innermost
   range`) only fires for scope-creating declarations, so variable /
   for-loop captures whose anchor is a child identifier stay put.
   Hooks can still override via `bindingScopeFor`.

Verification:
  - Flag-off: 191/191 (identical baseline).
  - Flag-on (REGISTRY_PRIMARY_PYTHON=1): 31 fail / 160 pass
    (was 32/159; the hoist unblocks free-call resolution end-to-end).
  - tsc --noEmit clean.

Per-(source,target) edge collapse for multi-call-site cases
(default-params, variadic) still pending — landing it without
regressing the static-method find_user fixture (which expects two
distinct edges through different targets) needs the ownership-aware
qualified-id work that lands with Unit 4 / Unit 11.

* feat(python-scope): capture function return-type annotations

Unit 3 of the python migration architectural plan
(docs/plans/2026-04-19-001-refactor-python-migration-architectural-plan.md).

Wires the `def get_user() -> User` return-type annotation into the
typeBindings stream so the existing constructor-inferred + transitive
chain machinery can resolve `u = get_user(); u.save()` to `User#save`
without any orchestrator change.

Changes:
- `query.ts` + `scopes.scm`: new `@type-binding.return` pattern keyed by
  the function name (matches RFC §5.1 canonical vocabulary).
- `interpret.ts`: maps `@type-binding.return` to the existing
  `'return-annotation'` source label (no shared change needed).
- `scope-extractor.ts pass4CollectTypeBindings`: extends the Pass 2
  auto-hoist (anchor range == innermost scope range → bind in parent)
  to type bindings as well — return-type bindings whose anchor IS the
  function_definition land in the function's enclosing scope so
  callers see them.

Same-file return-type inference is now end-to-end:
  `def get_user() -> User: ...` + `u = get_user()` produces
  `u: User (return-annotation)` in the caller's scope via
  `followChainedRef`.

Verification:
- Flag-off: 191/191 (identical baseline).
- Flag-on: 31 fail / 160 pass (no change — every remaining
  return-type test in this fixture set is *cross-file*; carrying
  `get_user → User` across module boundaries lands with the
  cross-file typeBinding propagation work in Unit 5/7).
- tsc --noEmit clean.

* feat(python-scope): resolve dotted receivers via class-scope field types

Unit 4 partial — the dotted-receiver case (`user.address.save()`).

Class-body annotations like `class User: address: Address` already
land in the class scope's typeBindings via the existing
`@type-binding.annotation` capture. This commit consumes that signal:

- Build a `Map<classDefId, Scope>` from every parsed file's class
  scopes once per resolution pass.
- New Case 0 in `emitReceiverBoundCalls`: when the receiver's name
  contains a dot, walk the chain — resolve the head's type, then for
  each remaining segment look up that field's type in the owner
  class's scope.typeBindings, then emit the call against the final
  class with MRO walk.
- Cross-scope lookups use each TypeRef's `declaredAtScope` so an
  imported `Address` resolves in the file that owns the field
  declaration, not the file holding the call site.

Verification:
- Flag-off: 191/191 (identical baseline).
- Flag-on: 29 fail / 162 pass (was 31/160; both `Field type
  resolution` fixtures now pass — same-file and cross-file disambig).
- tsc --noEmit clean.

Remaining Unit 4 work (write ACCESSES, `self.X` for-loop iteration)
needs Unit 6's tuple/iterable destructuring before it can land —
`for u in self.users` requires the iterable typing path.

* feat(python-scope): chain receiver via call-expression return types

Unit 5 — extends the compound-receiver case to handle call-expression
receivers (`svc.get_user().save()`).

`resolveCompoundReceiverClass` is the single recursive entry point for
all compound receivers. Three shapes:
  - bare identifier — typeBinding chain
  - dotted `obj.field[.field]…` — class-scope field types
  - call `expr.method()` — recurse into expr, look up method's
    return-type typeBinding on its class scope

Method return-type bindings auto-hoist to the parent (class) scope per
Unit 3, so `methodClassScope.typeBindings.get(methodName)` is the
canonical lookup. Free-call return types (`get_user()`) walk the
caller's scope chain.

Depth-capped at 4 hops to bound recursion.

Verification:
- Flag-off: 191/191 (identical baseline).
- Flag-on: 28 fail / 163 pass (was 29/162; `Python chained method
  call resolution` now passes).
- tsc --noEmit clean.

Two related tests (`city.save() via method chain`, `c.greet().save()
depth-2 MRO`) still fail because the captures yield typeBindings
shaped like `city → user.get_city` (no trailing parens — the capture
grabs the attribute text). Resolving those needs a follow step that
detects the call-shape rawName and feeds it through the compound
recurser. Lands with the chain-typeBinding work in a follow-up.

* feat(python-scope): free-call fallback consults finalized bindings

Unit 7 — closes the cross-file free-call gap.

The shared `MethodRegistry.lookup` walks `scope.bindings` (pre-finalize
local-only) for free-call resolution. Cross-file imports land in
`indexes.bindings` (post-finalize). Without the dual-source lookup,
`from x import f; f()` resolves to "unresolved" and no CALLS edge is
emitted.

Two changes:

- `emit-core/scope-walkers.ts`: new `findCallableBindingInScope` —
  same dual-source pattern as `findClassBindingInScope`, but accepts
  Function/Method/Constructor. Promoted to emit-core because every
  language with cross-file imports needs the same lookup.
- `python-scope-emit.ts emitFreeCallFallback`: post-pass that walks
  every free-call reference site, looks up the callee with the new
  helper, and emits via `tryEmitEdge`. Pre-seeds `seen` from the
  shared resolver's emissions so we never double-count.

Verification:
- Flag-off: 191/191 (identical baseline).
- Flag-on: 22 fail / 169 pass (was 28/163; +6 tests including
  the Python overload dispatch fixtures, ancestor-directory imports,
  and same-name module-alias collision).
- tsc --noEmit clean.

* feat(python-scope): super() receiver dispatches up the MRO

Unit 8 — `super().method()` inside a class method walks the enclosing
class's MRO chain (skipping self) and resolves to the first ancestor
that owns the method.

New receiver branch in `emitReceiverBoundCalls` recognizes
`super(...)` syntactically (regex-cheap), finds the enclosing class
via a new `findEnclosingClassDef` scope-walk helper, then re-uses
`scopes.methodDispatch.mroFor` + `findOwnedMember` from the existing
class-receiver path. Handled before the compound-receiver case so
`super()` doesn't fall into the bare-identifier branch where `super`
isn't a binding.

Verification:
- Flag-off: 191/191 (identical baseline).
- Flag-on: 21 fail / 170 pass (was 22/169; `super().save() inside
  User to BaseModel.save` now passes).
- tsc --noEmit clean.

* feat(python-scope): suppress shared resolver on member-call sites

Unit 9 — `app_metrics.get_metrics()` (namespace import alias) was
emitting two CALLS edges: a wrong self-call from the shared
resolver's free-call fallback, plus the correct namespace-receiver
edge from the Python post-pass.

Mechanism:

- `emit-core/emit-references.ts`: new optional `skipSites` parameter
  (`Set<string>` of `${filePath}:${line}:${col}` keys). When supplied,
  references at those positions are skipped — the provider has
  already emitted (or chosen not to emit) for that site.
- `python-scope-emit.ts`: reorders Phase 4 — receiver-bound + free-
  call fallback run FIRST, populating `handledSites`. The shared
  `emitReferencesViaLookup` then runs with that set so the resolver's
  fallback can't fight a precise per-receiver emission. Site keys are
  added only on successful tryEmitEdge (not for sites the post-pass
  saw but couldn't resolve — those still get a chance from the shared
  path).

Verification:
- Flag-off: 191/191 (identical baseline).
- Flag-on: 20 fail / 171 pass (was 21/170; same-name module-alias
  collision now resolves correctly).
- tsc --noEmit clean.

* feat(python-scope): propagate return-type bindings across imports

Closes the cross-file return-type propagation gap that left tests
like `u = get_user(); u.save()` (where get_user lives in another
file) with `u` typed as the function name instead of its return type.

The shared finalize pass copies callable bindings (`from x import f`
puts `f` in the importer's bindings) but typeBindings stay file-local
because they live on `Scope.typeBindings`, not on the index. Mutate
post-finalize:

- For each module-scope import binding (`origin: 'import'` or
  `'reexport'`), look up the source file's module-scope typeBinding
  for the def's simple name. If present (return-annotation source),
  mirror it under the importer's local alias. Skip when the importer
  already has its own typeBinding for the name (explicit local always
  wins).
- After propagation, re-run a chain-follow on every scope's
  typeBindings — pass-4 ran before propagation and missed any chain
  whose terminal lived in a foreign file. Same algorithm as
  `followChainedRef` in scope-extractor, but operates on the
  finalized scopes so propagated entries are visible.

Mutating `Scope.typeBindings` is safe — `draftToScope` constructs a
plain `new Map(...)`, not a frozen one.

Verification:
- Flag-off: 191/191 (identical baseline).
- Flag-on: 16 fail / 175 pass (was 20/171; +4 — both cross-file
  return-type tests, plus two related propagation cases).
- tsc --noEmit clean.

* feat(python-scope): for-loop call-iterable typeBinding

Adds `(for_statement left: (identifier) right: (call function:
(identifier)))` to the typeBinding capture set. Combined with Unit 3's
return-type capture and the cross-file return-type propagation pass,
this makes `for u in get_users(): u.save()` resolve to `User.save`
even when `get_users` is imported from another module.

Captured as `@type-binding.alias` (rawName = function identifier,
without parens) so the existing chain-follow walks the alias to the
function's return-type binding without any new code path.

Verification:
- Flag-off: 191/191 (identical baseline).
- Flag-on: 12 fail / 179 pass (was 16/175; +4 for-loop call-iterable
  tests across get_users / get_repos fixtures).
- tsc --noEmit clean.

* feat(python-scope): collapse free-call edges per (caller, target)

Free calls (no explicit receiver) now emit a single CALLS edge per
(caller, target) pair regardless of how many call sites the caller
contains. Mirrors the legacy DAG's per-pair dedup contract — what
the `default-params`, `variadic`, and `overload` fixtures expect.

Member calls keep position-based dedup so distinct resolved targets
(e.g. UserService.find_user vs AdminService.find_user from the same
caller) still produce distinct edges.

Implementation: bypass `tryEmitEdge` (which dedupes positionally) and
hand-roll the relationship with a position-independent rel.id
(`rel:CALLS:<caller>-><target>`). Site handling is now unconditional —
even when the dedup-collapse skips the actual emit, we mark the site
handled so the shared `emit-references` doesn't fight us with its
fallback.

Verification:
- Flag-off: 191/191 (identical baseline).
- Flag-on: 10 fail / 181 pass (was 12/179; +2 — both `default
  parameter arity` tests now pass).
- tsc --noEmit clean.

* fix(python-scope): match legacy CALLS reason for import-resolved free calls

The arity-narrowing test asserts \`rel.reason === 'import-resolved'\`
for cross-file free-call edges. Switch the free-call fallback's
reason to mirror legacy DAG semantics:
  - target-file !== source-file → 'import-resolved'
  - same file                   → 'local-call'

Verification:
- Flag-off: 191/191 (identical baseline).
- Flag-on: 9 fail / 182 pass (was 10/181; +1 arity-narrowing test).
- tsc --noEmit clean.

* fix(python-scope): drop dead pre-seeding from receiver-bound pass

The pre-seeding loop at the top of \`emitReceiverBoundCalls\` populated
\`seen\` with every reference the shared resolver had already resolved.
That was useful when emit-references ran FIRST. After Unit 9 reversed
the order (emit-references runs after the Python passes and uses
\`handledSites\` to skip what we processed), the pre-seed only causes
harm: when an MRO walk in Case 0 (compound receiver) and Case 4
(simple typeBinding) both touch the same site at the same position
but resolve to different targets, the pre-seed suppresses the second
emission because the shared resolver had already entered the wrong
target into \`seen\`.

Concrete case: \`c.greet().save()\` — Case 0 emits the outer save edge
to Greeting.save; Case 4 then resolves the inner \`c.greet()\` to
A.greet via MRO walk. With pre-seed both edges should emit (different
targets, different rel.ids); without removing the pre-seed the inner
emission was being deduped against an already-seeded entry and the
A.greet edge was lost.

Verification:
- Flag-off: 191/191 (identical baseline).
- Flag-on: 8 fail / 183 pass (was 9/182; +1 — \`c.greet() to A#greet
  via MRO walk\` now passes).
- tsc --noEmit clean.

* feat(python-scope): enumerate(X) for-loop tuple destructuring

Adds two new typeBinding capture patterns for the canonical enumerate
pattern:

  for (i, u) in enumerate(users): ...   ; tuple_pattern
  for  i, u  in enumerate(users): ...   ; pattern_list

Both bind the second tuple element (u) to the iterable identifier
(users). The chain-follow then unwraps users → its element type via
the existing generic-strip in interpret.ts (List[User] → User).

The #eq? predicate scopes the pattern to enumerate specifically;
generic tuple destructuring of arbitrary callables is left to a
future iteration once we have a richer signal for "what does this
call yield".

Verification:
- Flag-off: 191/191 (identical baseline).
- Flag-on: 7 fail / 184 pass (was 8/183; +1 — `parenthesized tuple:
  for (i, u) in enumerate(users)` now passes).
- tsc --noEmit clean.

* feat(python-scope): dict.items() value-type unwrapping

Two changes that together resolve `for k, v in data.items(): v.save()`:

- `interpret.ts stripGeneric`: extends to `dict[K, V]` /
  `Dict[K, V]` / `Mapping[K, V]` etc., stripping to the value type V.
  Previously only single-arg generics (list[User] → User) were
  stripped; multi-arg ones returned the raw text.
- `query.ts` + `scopes.scm`: new typeBinding patterns for
  `for k, v in X.items()` (both pattern_list and tuple_pattern). The
  second tuple element binds to X; the chain-follow then unwraps X's
  dict annotation to V via the new stripGeneric branch.

Verification:
- Flag-off: 191/191 (identical baseline).
- Flag-on: 6 fail / 185 pass (was 7/184; +1 — `dict.items() loop`
  test now passes).
- tsc --noEmit clean.

* feat(python-scope): nested tuple destructuring for enumerate(d.items())

Two more for-loop typeBinding patterns:

- `for i, (k, v) in enumerate(d.items())` — nested tuple destructuring
  where v is the value of the dict's items() yield.
- `for v in d.values()` — explicit values() form (companion to items).

Both bind the loop var to the dict identifier; the chain-follow
unwraps via the dict-aware stripGeneric to the value type.

Verification:
- Flag-off: 191/191 (identical baseline).
- Flag-on: 5 fail / 186 pass (was 6/185; +1 nested tuple test).
- tsc --noEmit clean.

* feat(python-scope): 3-var flat destructuring for enumerate(d.items())

Adds the \`for i, k, v in enumerate(d.items())\` shape — flat
3-variable destructuring of the (i, (k, v)) tuple yielded by
\`enumerate\` over \`items()\`. Binds v (the last identifier in the
pattern_list) to the dict identifier; the existing dict-aware
stripGeneric unwraps to the value type.

Verification:
- Flag-off: 191/191 (identical baseline).
- Flag-on: 4 fail / 187 pass (was 5/186; +1).
- tsc --noEmit clean.

* feat(python-scope): write ACCESSES edges for attribute assignments

Three changes that together produce ACCESSES (write) edges for
\`obj.field = value\` assignments:

- New \`@reference.write.member\` capture in query.ts and scopes.scm
  matching \`(assignment left: (attribute object: ... attribute: ...))\`.
  Reuses the existing receiver/name capture shape so the
  receiver-bound emit pass can resolve obj's class and look up the
  field.
- \`populateMethodOwnerIds\` now sets ownerId on class-body fields too,
  not only on methods. Previously it only walked Function scopes
  whose parent was Class; class-body annotations like \`name: str\`
  live directly in the Class scope's ownedDefs and were missed, so
  \`findOwnedMember(User, "name")\` returned undefined.
- \`emit-core isLinkableLabel\` extends to Variable and Property so
  field nodes appear in the graph-node lookup (the legacy parser
  emits both kinds for class-body annotations).
- Case 4 in receiver-bound pass now uses the kind word as the edge
  reason for read/write sites — matches the legacy DAG convention
  the test asserts on.

Verification:
- Flag-off: 191/191 (identical baseline).
- Flag-on: 3 fail / 188 pass (was 4/187; +1 — write-ACCESSES test).
- tsc --noEmit clean.

* feat(python-scope): chain-typebinding + field-fallback method lookup

Reaches the architectural-plan target of >= 189/191 flag-on passing.

Two intertwined changes:

- Field-fallback in resolveCompoundReceiverClass: when method lookup
  on the receiver's class (and its MRO) fails, walk the class's
  fields and try the same lookup on each field's type. Matches the
  "unified fixpoint" intent of the method-chain fixture where
  `user.get_city()` reaches `Address.get_city` through User's
  `address: Address` field.
- New Case 3b in receiver-bound emit pass: when the receiver's
  typeBinding rawName has a dot but isn't a namespace prefix
  (e.g. `city -> user.get_city` from the constructor-inferred capture
  for `city = user.get_city()`), treat it as a method-call chain and
  pipe through the compound resolver. The chain unwraps to the
  terminal class (City) and the call resolves normally.

Verification:
- Flag-off: 191/191 (identical baseline).
- Flag-on: 2 fail / 189 pass (was 3/188; +1 city.save method chain).
- tsc --noEmit clean.

Remaining 2 failures are fixture-driven (self.users / self.repos
fixtures reference fields that aren't declared on the class) and
documented as known-limitation in Unit 10.

* feat(python-scope): flip Python to registry-primary (191/191 parity)

Adds the \`for u in self.X\` heuristic typeBinding capture (binds u to
the attribute name X so the chain-follow can resolve via the enclosing
method's parameter typeBinding) — closes the last two failing
fixtures whose classes reference \`self.X\` for fields that are
actually method parameters.

With 191/191 passing on BOTH legacy and registry-primary paths,
flips \`MIGRATED_LANGUAGES\` to include \`SupportedLanguages.Python\`.

Effects:
- Production default for Python files: registry-primary path.
- CI parity gate auto-discovers Python via the script + workflow
  (\`scripts/ci-list-migrated-languages.ts\` /
  \`.github/workflows/ci-scope-parity.yml\`) and runs the resolver
  integration test BOTH ways on every PR.
- Operators retain the \`REGISTRY_PRIMARY_PYTHON=0\` escape hatch.

Verification:
- REGISTRY_PRIMARY_PYTHON=0 (legacy): 191/191.
- REGISTRY_PRIMARY_PYTHON=1 (registry): 191/191.
- Default (unset, post-flip): 191/191 (uses registry).
- tsc --noEmit clean.

This concludes RFC #909 Ring 3 — Python migration.

* refactor(emit-core): EmitProvider interface + promote 5 generic helpers

G-Units 1-2 of the emit-pipeline generalization plan.

Adds:
- emit-core/emit-provider.ts — typed EmitProvider contract (6 required +
  2 optional fields). Will be consumed by the generic orchestrator in
  G-Unit 6. Documents the LanguageProvider vs EmitProvider boundary.
- emit-core/emit-free-call.ts — emitFreeCallFallback promoted as-is
  (drops the unused referenceIndex pre-seed parameter; underscore-prefixed
  to keep the signature compatible).
- emit-core/propagate-return-types.ts — propagateImportedReturnTypes +
  followChainPostFinalize. Documents the mutation contract (Invariant
  I3 + I6 from the plan): runs after finalize, before resolve, mutates
  the non-frozen Scope.typeBindings map.
- emit-core/scope-walkers.ts: + findEnclosingClassDef +
  findExportedDefByName. Both were already generic in the Python
  source.

python-scope-emit.ts shrinks 1055 → 799 lines (–256). Imports the
promoted helpers from emit-core. No behavior change.

Verification:
- REGISTRY_PRIMARY_PYTHON=0 (legacy): 191/191.
- REGISTRY_PRIMARY_PYTHON=1 (registry): 191/191.
- tsc --noEmit clean.

* refactor(emit-core): promote receiver-bound dispatcher + compound resolver

G-Unit 3 of the emit-pipeline generalization plan.

- emit-core/emit-compound-receiver.ts — resolveCompoundReceiverClass
  + matchingOpenParen + COMPOUND_RECEIVER_MAX_DEPTH. Field-fallback
  is now an option (default true) so strictly-typed languages can
  opt out via EmitProvider.fieldFallbackOnMethodLookup.
- emit-core/emit-receiver-bound.ts — the 7-case dispatcher (super,
  Cases 0/1/2/3/3b/4). Accepts a ReceiverBoundProviderSubset
  (isSuperReceiver + fieldFallbackOnMethodLookup) so partial wiring
  works during the rest of the migration. Documents Contract
  Invariants I4 (case order) and I5 (no pre-seeding).

python-scope-emit.ts shrinks 799 → 384 lines. The orchestrator now
calls the generic emitReceiverBoundCalls with an inline minimal
provider (pythonEmitProviderInline) — full provider lands in G-Unit 6
when the orchestrator itself moves to languages/python/emit/.

Verification:
- REGISTRY_PRIMARY_PYTHON=0 (legacy): 191/191.
- REGISTRY_PRIMARY_PYTHON=1 (registry): 191/191.
- tsc --noEmit clean.

* refactor(emit-core): promote MRO walk + populateClassOwnedMembers

G-Units 4-5 of the emit-pipeline generalization plan.

- emit-core/build-mro.ts — generic buildMro takes a LinearizeStrategy
  hook receiving (classDefId, directParents, parentsByDefId). Three
  shared steps (collect EXTENDS, build defId-by-graphId, walk per
  class) + parametric linearization. Default strategy is BFS-with-
  visited (Python's depth-first first-seen, also correct for
  single-inheritance languages).
- emit-core/scope-walkers.ts: + populateClassOwnedMembers — generic
  OO ownership rule (methods + class-body fields). Both rules ship
  together because every OO language migrated so far (Python; planned
  TS/JS/Java/Kotlin) wants both. Languages that need different rules
  can compose with this as a base step.

python-scope-emit.ts shrinks 384 → 255 lines.

Verification:
- REGISTRY_PRIMARY_PYTHON=0 (legacy): 191/191.
- REGISTRY_PRIMARY_PYTHON=1 (registry): 191/191.
- tsc --noEmit clean.

* refactor(scope-resolution): generic orchestrator + language-agnostic phase

G-Units 6-7 of the emit-pipeline generalization plan, plus the
pipeline-phase generalization (the user's observation that the phase
itself is generic once the orchestrator is).

Changes:

- emit-core/orchestrator.ts — runScopeResolution(input, provider).
  The 180 lines of pipeline glue moved here, parametrized by
  EmitProvider. Provider supplies LanguageProvider, importEdgeReason,
  and the 6 emit-side hooks.
- emit-core/emit-provider.ts — EmitProvider gains languageProvider
  and importEdgeReason fields so the orchestrator needs nothing else.
  resolveImportTarget now takes (targetRaw, fromFile, allFilePaths).
- languages/python/emit/index.ts — pythonEmitProvider + thin
  runPythonScopeResolution wrapper. The first reference impl every
  next-language migration copies.
- emit-providers-registry.ts (NEW) — registry of per-language
  EmitProviders keyed by SupportedLanguages. Adding a language is
  one line here + the provider file.
- pipeline-phases/scope-resolution.ts (NEW) — language-agnostic phase
  iterating EMIT_PROVIDERS ∩ MIGRATED_LANGUAGES. Replaces
  pipeline-phases/python-scope.ts (deleted).
- python-scope-emit.ts deleted.
- pipeline.ts swaps pythonScopePhase → scopeResolutionPhase.

The next language migration is now: implement EmitProvider, register
it, add to MIGRATED_LANGUAGES. No new pipeline phase, no orchestrator
copy-paste. The Python migration's 700+ lines of glue collapse to
~80 lines per future language.

Verification:
- REGISTRY_PRIMARY_PYTHON=0 (legacy): 191/191.
- REGISTRY_PRIMARY_PYTHON=1 (registry): 191/191.
- Default (post MIGRATED_LANGUAGES flip): 191/191.
- tsc --noEmit clean.

* docs(emit-provider): migration cookbook for next-language porters

* refactor(scope-resolution): rename emit-core/ → scope-resolution/, EmitProvider → ScopeResolver

Reorganizes the registry-primary resolution layer for clarity and
contributor onboarding. Driven by feedback that "emit" was triple-
overloaded (graph-edge emission + tree-sitter capture extraction +
the provider name itself), and the flat 16-file emit-core/ folder
mixed five concerns.

External research (rust-analyzer hir-def/nameres, Pyright analyzer/,
TypeScript binder/checker, Roslyn Binder, IntelliJ Resolver, swc
semantic/, biome semantic/, semgrep naming/, JDT Binding, clangd
Sema) consistently uses **the phase name** for this layer, never an
output verb. "Scope resolution" matches our pipeline-phase name, the
plan, and the RFC.

## Folder rename

  emit-core/                              → scope-resolution/
  ├── (16 flat files)                     → ├── contract/scope-resolver.ts
                                            ├── pipeline/{run,registry,phase}.ts
                                            ├── passes/{receiver-bound-calls,
                                            │           free-call-fallback,
                                            │           compound-receiver,
                                            │           imported-return-types,
                                            │           mro}.ts
                                            ├── graph-bridge/{node-lookup,ids,
                                            │                 edges,references-to-edges,
                                            │                 imports-to-edges,
                                            │                 method-dispatch}.ts
                                            └── scope/{walkers,namespace-targets}.ts

Each subfolder maps to one concern a new contributor needs to find:
*the contract I implement / the runner that calls me / the helpers I
reuse / the graph layer I shouldn't touch / the scope walkers*.

## Symbol renames

  EmitProvider                  → ScopeResolver
  pythonEmitProvider            → pythonScopeResolver
  runPythonScopeResolution      → resolvePythonScope
  EMIT_PROVIDERS                → SCOPE_RESOLVERS
  getEmitProvider               → getScopeResolver
  RunPythonScopeResolution{Input,Stats} → ResolvePythonScope{Input,Stats}

## File renames (per-language)

  languages/python/emit/index.ts → languages/python/scope-resolver.ts
  languages/python/emit-captures.ts → languages/python/captures.ts
                                     (kills the parse-side "emit" collision)

## Mechanics

- Used `git mv` for all files so blame history is preserved.
- Updated ~30 import lines across 18 files plus the pipeline-phases
  barrel and pipeline.ts.
- Updated JSDoc cross-references throughout to match the new vocabulary.

Verification:
- REGISTRY_PRIMARY_PYTHON=0 (legacy): 191/191.
- REGISTRY_PRIMARY_PYTHON=1 (registry): 191/191.
- Default (post MIGRATED_LANGUAGES flip): 191/191.
- tsc --noEmit clean.

Migration cookbook in `scope-resolution/contract/scope-resolver.ts`
JSDoc points the next-language porter at all the new names and
folder locations.

* docs(scope-resolution): finalize phase JSDoc + drop python emoji from generic log line

* perf(scope-resolution): O(1) workspace lookup index

Introduces `WorkspaceResolutionIndex` — a precomputed bundle of
lookup tables built ONCE per resolution run, after `populateOwners`
and after finalize, before any pass that needs to find members,
exported defs, or class scopes by id.

What it replaces (all are pre-existing O(N×D) linear scans of
parsedFiles, called inside the receiver-bound MRO chain):

- `findOwnedMember(ownerId, name, parsedFiles)` → `Map.get` via
  `index.memberByOwner.get(ownerId)?.get(name)`. Was the worst
  offender — receiver-bound dispatcher calls this O(sites × MRO
  depth) times.
- `findExportedDef(filePath, name, parsedFiles)` → `Map.get` via
  `index.defsByFileAndName`. Hot for namespace-receiver case.
- `findExportedDefByName` workspace-wide fallback scan → `Map.get`
  via `index.callablesBySimpleName`.
- `classScopeByDefId` (rebuilt inside `emitReceiverBoundCalls` on
  every invocation) — moved to one-shot build during finalize, read
  from `index.classScopeByDefId` everywhere.
- `moduleScopeByFile` (rebuilt inside `propagateImportedReturnTypes`
  on every invocation) — read from `index.moduleScopeByFile`.

Findings from a synthetic 100-file Python workload (60 model files
each defining 5 classes × 3 methods + 40 user files calling them
heavily):

  scope-resolution wall time: 764ms → 710ms (median, 5 iters)

That's a ~7% in-layer win. The smaller-than-expected gain was
informative: profiling the synthetic workload shows scope-resolution
breakdown is `extract=62% resolve=30% emit=4%`; the index touched
the 4% slice (emit + walker calls inside it). Larger O(D) per owner
classes will benefit more.

Profiling the FULL pipeline (49 fixtures × 3 iters) shows
scope-resolution accounts for ~1% of pipeline wall time — the
remaining 99% is parse (tree-sitter), heritage, ORM, MRO, processes,
and DB writes. So further optimization of this specific layer has
marginal pipeline impact; the next-biggest wins live in those
phases. Documented as the "double-parse" finding in the audit
(captures.ts re-parses each Python file even though the parse phase
already produced a tree-sitter Tree) — that's a separate plumbing
project across phase boundaries.

Bonus: opt-in PROF_SCOPE_RESOLUTION=1 env var prints a per-phase
ms breakdown to stderr, so future perf work can measure without
extra code changes.

Verification:
- REGISTRY_PRIMARY_PYTHON=0 (legacy): 191/191.
- REGISTRY_PRIMARY_PYTHON=1 (registry): 191/191.
- tsc --noEmit clean.

* perf(parse/heritage/mro): typed graph iterator + cross-phase tree cache

Two structural perf wins targeting the parse / heritage / MRO
layers, identified by the post-WorkspaceResolutionIndex profiling
(scope-resolution = ~1% of pipeline; the bulk lives upstream).

## 1. KnowledgeGraph.iterRelationshipsByType (PHM-Units 1-2)

- Adds a per-type `Map<RelationshipType, Map<id, Relationship>>`
  index inside `createKnowledgeGraph`, maintained on add / remove /
  removeNode / removeNodesByFile.
- New `iterRelationshipsByType(type)` returns a typed iterator that
  yields only the requested type. Backwards-compatible: existing
  `iterRelationships()` / `forEachRelationship()` callers untouched.
- Migrated two MRO call sites:
  - `mro-processor.ts buildAdjacency`: split the single
    `forEachRelationship` (which scanned every edge in the graph and
    type-filtered per-iteration) into three typed iterations
    (EXTENDS, IMPLEMENTS, HAS_METHOD).
  - `scope-resolution/passes/mro.ts buildMro`: replaced
    `for (const rel of graph.iterRelationships()) if (rel.type !== 'EXTENDS') continue`
    with `for (const rel of graph.iterRelationshipsByType('EXTENDS'))`.
- Heritage-processor (PHM-Unit 3) was a no-op: it only WRITES
  EXTENDS/IMPLEMENTS edges, never re-reads. Index is still useful
  for the seven other graph-iter consumers (community-processor,
  csv-generator, wildcard-synthesis, process-processor, etc.) — those
  follow-ups can switch to the typed iterator without touching the
  graph layer.
- Adds 5 unit tests for the new method (add/remove/dedupe semantics,
  empty-type fresh iterator, removeNode index sync).

## 2. Cross-phase tree cache (PHM-Units 4-5)

The audit's #2 finding: Python files are parsed by tree-sitter once
in the parse phase, then re-parsed inside scope-resolution's
`captures.ts`. Eliminate the second parse by sharing the Tree across
phases.

- `parse-impl.ts` now maintains TWO ASTCaches with distinct lifetimes:
  - `astCache` (chunk-local, cleared between chunks) — unchanged;
    used by call/heritage/import processors during parse.
  - `scopeTreeCache` (total-parseable-sized, never cleared) — new,
    exposed via `ParseOutput.astCache` for cross-phase consumption.
- `parsing-processor.ts` writes every sequentially-parsed Tree to
  BOTH caches. Worker-mode parses skip the persistent cache too
  (Trees can't cross MessageChannels).
- `LanguageProvider.emitScopeCaptures` gains an optional `cachedTree`
  parameter (typed `unknown` to keep the tree-sitter dep out of the
  contract).
- `captures.ts` short-circuits its own `parser.parse(sourceText)`
  when a cached Tree is supplied. Cache miss falls back to a fresh
  parse — same correctness path as before.
- `runScopeResolution` accepts an optional `treeCache` and forwards
  per-file `cachedTree` to `extractParsedFile`.
- `scope-resolution/pipeline/phase.ts` reads
  `getPhaseOutput<{astCache}>(deps, 'parse')` and passes through.

Verified end-to-end: a small fixture run with PROF_SCOPE_RESOLUTION=1
shows 6/6 cache hits (100% hit rate) on the python-grandparent fixture
that exercises the full pipeline below the worker-pool threshold.

## Verification

- REGISTRY_PRIMARY_PYTHON=0 (legacy): 191/191.
- REGISTRY_PRIMARY_PYTHON=1 (registry): 191/191.
- New graph.test.ts: 25/25 (was 20).
- tsc --noEmit clean.

## Where the win lands

Wall-clock on the 49-fixture integration suite: 14050ms → 14080ms
(within noise). Fixtures are 1-3 files each, dominated by per-fixture
pipeline overhead (worker-pool init, DB writes, fixture startup).
The cache + typed-iterator wins are constant-factor improvements
that scale linearly with workload size and visible only on larger
repos. The dev-mode `PROF_SCOPE_RESOLUTION` instrumentation +
`getPythonCaptureCacheStats()` are kept for future perf work.

## Plan

docs/plans/2026-04-20-002-perf-parse-heritage-mro-plan.md.
PHM-Unit 3 (heritage-processor migration) intentionally collapsed
to a no-op — heritage only writes, never re-reads.

* perf(scope-resolution): bound tree-cache lifetime + gate population

Address P1 residuals from ce:review of 8c6f5cee:

- Dispose scopeTreeCache at end of scopeResolutionPhase via
  astCache.clear(). Trees were previously retained for the full
  pipeline (10-100x memory regression on large repos). Downstream
  phases (mro, community, csv-generator) never read them.
- Gate scopeTreeCache.set on provider.emitScopeCaptures !== undefined.
  Polyglot repos no longer retain Trees for languages with no
  scope-resolution consumer.
- PROF_SCOPE_RESOLUTION=1 now warns when workers engage, since
  Trees can't cross MessageChannels so the cache will be empty for
  worker-parsed files — prevents a silent perf cliff once a repo
  crosses the worker-pool threshold.

Tests: 26/26 graph unit, 299/299 scope-resolution unit, 191/191
python integration both flag paths.

* refactor(scope-resolution): clean up P2/P3 review residuals

P2:
- WASM dual-ownership invariant documented on ASTCache dispose:
  a Tree must live in AT MOST ONE disposing ASTCache. Native
  tree-sitter today is unaffected; WASM adoption would require
  tree.copy() or a non-disposing secondary cache.
- mro-processor C3 ordering test: pins EXTENDS-before-IMPLEMENTS
  parent grouping for classes with interleaved edge additions.
  Asserts exact MRO ['Base', 'Iface'] — a revert to single-loop
  insertion-order iteration would produce ['Iface', 'Base'] and
  fail loudly.
- cached-tree parity test: emitPythonScopeCaptures(src, path, T)
  returns identical CaptureMatch[] to emitPythonScopeCaptures(src,
  path). Pins the cache-hit path's correctness so a regression
  that silently returns stale captures would break the test.

P3:
- Dev-mode cache counters moved from captures.ts to cache-stats.ts.
  Production hot-path module no longer carries the module-global
  export surface; PROF gating behavior preserved.
- ParseOutput field rename astCache → scopeTreeCache. Clarifies
  that the surfaced cache is the persistent cross-phase one, not
  the chunk-local astCache parse-impl clears between chunks.
  Single consumer (scopeResolutionPhase) updated; no other readers.
- ASTCacheReader interface extracted. scopeResolutionPhase now
  reads the phase dep via a shared type instead of a hand-rolled
  inline structural shape that could drift from ASTCache's contract.
- graph.ts dual-index invariant enforced through writeRel/deleteRel
  private helpers instead of duplicated add/delete at 3 mutation
  sites. Adding a new mutation method only needs to call the
  helpers — forgetting to update one index becomes structurally
  impossible.

Tests: 382/382 unit (incl. 2 new), 191/191 python integration both
flag paths. tsc clean.

* fix(ci): prettier formatting + Python-migration test adjustments

CI run 24666612657 failed on three jobs. Fixes:

quality/format:
- Prettier --check flagged 3 files after the accumulated branch work.
  Ran prettier --write from repo root (CI's invocation cwd) to apply:
  simple-hooks.ts, resolve-references.ts, python-hooks.test.ts.

tests/{ubuntu,macos,windows} — 9 assertion failures, all traceable to
Python landing in MIGRATED_LANGUAGES (default-on registry-primary):

  - registry-primary-flag.test.ts (3 tests): the 'returns false by
    default' / 'primaryLanguages empty' / 'Python mid-process
    mutation' assertions were written in Ring 2 when MIGRATED_LANGUAGES
    was empty. Rewrote to assert MIGRATED_LANGUAGES membership is the
    default, use Java (unmigrated) for the no-stale-cache test, and
    verify env overrides work in both directions (migrated-off,
    unmigrated-on).
  - call-processor.test.ts (6 tests in SM-10 + D2-widen blocks):
    these exercise the LEGACY call-resolution DAG on .py fixtures.
    processCalls now gates Python out (isRegistryPrimary === true by
    default), returning 0 edges. Added REGISTRY_PRIMARY_PYTHON=false
    override in the relevant beforeEach + restore in afterEach, so
    the legacy DAG runs for these test-local fixtures without
    affecting the production-default behavior.

Local verification: 4126/4126 unit tests pass, prettier clean.

* docs(python): known-limitation block on scope-resolution public API

Unit 10 — document what the Python registry-primary path intentionally
does not resolve, so reviewers and future maintainers can distinguish
conscious trade-offs from latent bugs:

- Dynamic attribute access (getattr / setattr)
- Dynamic imports (importlib, __import__)
- Metaclass-driven dispatch
- Union / Optional branch-picking behavior
- Arbitrary signature-rewriting decorators
- typing.TYPE_CHECKING-guarded imports
- *args / **kwargs type flow-through
- super() outside a directly-bound method

Each item names the file that owns the relevant hook so a future
follow-up knows where to start. Shadow-harness corpus parity + the
CI parity gate remain the authoritative signal for which of these
matter at fleet scale.

* docs: record scope-resolution pipeline alongside legacy call DAG

Capture what shipped in #980 so future readers don't have to reverse-
engineer the coexistence of the legacy call-resolution DAG and the new
scope-resolution pipeline:

- ARCHITECTURE.md: new 'Scope-Resolution Pipeline' section after the
  Call-Resolution DAG, documenting pipeline stages, ScopeResolver
  contract, per-language registration, code references, and perf
  notes. Coexistence block added to the legacy DAG section explaining
  how MIGRATED_LANGUAGES gates the two paths per-language.
- AGENTS.md: reference-docs pointer updated — legacy-DAG one-liner
  stays; scope-resolution pipeline gets its own pointer so agents
  know when to read which section. Changelog bumped.
- type-resolution-system.md: callout at the 'call-processor.ts is
  the consumer' claim pointing readers to the scope-resolution path
  for migrated languages. TypeEnv is still built per file, but for
  migrated languages receiver typing flows through ParsedTypeBinding
  rather than call-processor.ts.

CHANGELOG.md intentionally not touched — owned by the release process.

* chore: remove obsolete scheduled_tasks.lock file

* fix(scope-resolution): qualified-name keys for same-file method collisions

Review feedback from PR #980 reviewer flagged a BLOCKING correctness
bug: when two classes in the same file define a method with the same
simple name (e.g. class User: def save + class Document: def save),
every d.save() CALLS edge silently resolved to User.save because the
graph node lookup keyed only by (filePath, simpleName) and first-wins
took User's method.

Three-layer fix:

1. populateClassOwnedMembers now promotes a nested def's
   qualifiedName from `save` to `ClassName.save` when the def sits
   inside a class scope. Python's scopes.scm doesn't emit
   @declaration.qualified_name for methods, so without this the
   finalized SymbolDefinition carried only the simple name.
2. buildGraphNodeLookup adds a second key per node:
   (filePath, qualifiedName). For Method/Function nodes the qualifier
   is parsed deterministically out of the node id
   (`Method:file.py:User.save#N` → `User.save`), which is robust to
   Windows-style filePath colons. Simple-name key retained as a
   fallback for callers that don't know the qualifier.
3. resolveDefGraphId now tries the qualified key first, then falls
   back to the simple-name lookup.

Also addresses the non-blocking review items:

- scopeResolutionPhase.deps now includes `crossFile` so the Kahn's
  runner can't schedule scope-resolution before crossFile finishes
  writing heritage edges that buildMro consumes.
- run.ts no longer mutates the finalized ScopeResolutionIndexes via
  `as` cast — spreads into a fresh object with the populated
  methodDispatch field instead.
- Doc nits: scope-resolver.ts registry path + phase.ts Ring number.

Test coverage:
- New fixture test/fixtures/lang-resolution/python-same-file-method-collision
  with User.save + Document.save in one file and app.py calling both
  through typed receivers.
- Three new integration assertions pin that u.save() and d.save()
  target the correct qualified node id. Fail before the fix, pass
  after. Confirmed by running once without populateClassOwnedMembers
  qualifier promotion — reproduces the original User.save-for-both bug.

Verification: 194/194 test/integration/resolvers/python.test.ts pass
both REGISTRY_PRIMARY_PYTHON=0 and =1. 523/523 related unit tests.
tsc --noEmit clean.

* fix(scope-resolution): filter export index to module-level defs + label-prefixed qualified key

Codex adversarial review on PR #980 flagged that
buildWorkspaceResolutionIndex feeds defsByFileAndName and
callablesBySimpleName from parsed.localDefs — the flat set of every
def in the file including methods, fields, and nested functions.
findExportedDef / findExportedDefByName treat those maps as
file-level exports, so `mod.save()` could silently bind to User.save
whenever a method's simple name appeared first in parse order.

Plan: docs/plans/2026-04-21-001-fix-workspace-index-module-scope-only-plan.md

Fix layers:

1. workspace-index.ts: split the single parsed.localDefs loop into
   two passes:
   - Module-export pass: iterate moduleScope.ownedDefs PLUS ownedDefs
     of every child scope whose parent is the module scope. Top-level
     class and function declarations each live in their own scope
     with parent=module, not in moduleScope.ownedDefs directly, so
     the "parent === moduleScope.id" walk is required to reach them.
     Methods (scope.parent === Class scope) and nested functions
     (scope.parent === another Function scope) are excluded.
   - Member-by-owner pass: keeps iterating parsed.localDefs since
     that map is keyed on ownerId and correctly saw class-owned defs
     before this change.

2. graph-bridge/node-lookup.ts: qualified keys now live in a separate
   keyspace (`<q>:filePath::<label>::<qualifiedName>`) and include
   the node label. Without the label prefix, a top-level `def save`
   (Function, qualifier `save`) would collide with a class method
   `User.save` (Method, simple name `save`) in the same simple-key
   slot because the Function's qualifier happens to equal the
   Method's simple name. The label differentiates them.

3. graph-bridge/ids.ts: resolveDefGraphId uses the new
   type-prefixed qualified key when def.type is set. Simple-name
   fallback retained for languages that don't yet synthesize
   qualifiers on their defs.

Test fixture: python-module-export-vs-method-collision places
`class User: def save` BEFORE top-level `def save` — parse order
that exposes the bug (class method enters the index first). Three
new integration assertions:
  - `mod.save(x)` resolves to the module-level Function, not User.save
  - `u.save()` resolves to User.save Method
  - Exactly two CALLS edges to `save` exist, one per intended target

Fixture confirmed failing before the workspace-index fix (bug
reproduced), passing after.

Verification: 197/197 test/integration/resolvers/python.test.ts pass
both REGISTRY_PRIMARY_PYTHON=0 and =1. 523/523 related unit tests.
tsc --noEmit clean.

* fix(scope-resolution): drive module export index from moduleScope.bindings

Codex round-2 adversarial review flagged that the workspace-index
module-export pass iterated every def in every direct-child scope of
the module, including class-body Variable defs like
`class User: MAX_USERS = 100`. `defsByFileAndName[file][MAX_USERS]`
silently aliased to the class attribute. Latent today because Python
doesn't emit ACCESSES edges for `mod.NAME` member access, but the
index-layer leak would surface the moment reference capture widens.

Plan: docs/plans/2026-04-21-002-fix-codex-round2-scope-resolution-plan.md

Drive the module-export index from the extractor invariant instead of
a scope-kind → allowed-label switch:

moduleScope.bindings already contains exactly the names visible at
module level — top-level class/function declarations, module-level
variable assignments, imports. Class methods, class-body attributes,
and nested-function defs bind to their containing (Class or Function)
scope, not the module, so they're naturally excluded.

Filter to `BindingRef.origin === 'local'` so imports and wildcard
re-exports stay out of the index (matches the pre-fix invariant when
the source was `parsed.localDefs`).

No per-kind predicates, no scope-kind / def-kind enumeration, no
two-pass merge between moduleScope.ownedDefs and direct-child scope
walks — one loop, language-agnostic.

Codex also flagged `propagateImportedReturnTypes` as potentially
broken for function-local imports, but scope-dump probing showed the
finalize algorithm puts `from svc import get_user` into the MODULE
scope's finalized bindings even when declared inside a function, so
the existing module-scope propagation already handles the case. The
new python-function-local-import-chain integration test pins that
working behavior as a regression guard; no code change required.

Coverage:
- test/unit/scope-resolution/workspace-index.test.ts (new, 5 tests) —
  directly asserts the index shape. The "excludes class-body Variable
  defs" test fails without this fix and passes after (confirmed via
  stash-pop probe).
- test/integration/resolvers/python.test.ts — 4 new integration
  assertions across two describe blocks (python-class-attr-export-leak,
  python-function-local-import-chain) pin end-to-end invariants.
- Two new fixtures under test/fixtures/lang-resolution/.

Verification: 201/201 test/integration/resolvers/python.test.ts both
REGISTRY_PRIMARY_PYTHON=0 and =1. 528/528 related unit tests (was
523). tsc clean.

* test(scope-resolution): pin local-namespace-import behavior + document empirical finalize hoisting

Codex round-3 adversarial review raised three concerns about
scope-resolution passes assuming module-scope semantics that would
contradict `pythonImportOwningScope`'s documented per-scope contract.
Empirical verification via scope-dump probes resolved each:

Plan: docs/plans/2026-04-21-003-fix-codex-round3-scope-aware-resolution-plan.md

1. Function- and class-local namespace imports: VERIFIED WORKING.
   `def outer(): import svc as s; s.call()` and `class A: import mod;
   def use(self): mod.helper()` both emit CALLS edges with reason
   "scope-resolution: namespace-receiver". finalize-algorithm hoists
   the ImportEdges onto `indexes.imports[moduleScope]` regardless of
   where the `import` statement appears, so collectNamespaceTargets'
   module-scope read finds them.

2. Imported return-type propagation module-scope-only: VERIFIED
   WORKING (already pinned in round 2). `from svc import get_user`
   inside a function body lands in indexes.bindings[moduleScope], so
   propagateImportedReturnTypes' module-scope read still finds it.

3. Nested method-local defs stamped as class members: VERIFIED FALSE.
   The scope extractor creates nested Function scopes for inner
   `def`s; `def helper` inside `def save` inside `class User` lives
   in helper's own Function scope whose parent is save's Function
   scope (NOT the Class scope). populateClassOwnedMembers'
   `parentScope.kind === 'Class'` branch correctly skips it;
   helper.ownerId stays undefined.

Instead of implementing speculative scope-aware refactors that the
tests would pass regardless, this commit:

- Adds regression fixtures and integration assertions that pin each
  working behavior. If finalize routing ever changes to honor the
  hook's per-scope contract, these assertions flip red and signal the
  need for the scope-chain-aware refactor.
- Adds defensive JSDoc to the three flagged call sites
  (collectNamespaceTargets, propagateImportedReturnTypes,
  populateClassOwnedMembers) documenting the empirical invariant so
  future reviewers don't re-derive Codex's theoretical concern
  without the benefit of the probe.

Files:
- Two new fixtures under test/fixtures/lang-resolution/ covering the
  function-local and class-body namespace-import patterns.
- Two new describe blocks in test/integration/resolvers/python.test.ts
  (3 assertions, positive-pin intent).
- Defensive comments in namespace-targets.ts, imported-return-types.ts,
  and scope-resolution/scope/walkers.ts.

Verification: 204/204 test/integration/resolvers/python.test.ts both
REGISTRY_PRIMARY_PYTHON=0 and =1. tsc clean.

* perf(graph): reverse-adjacency + file indexes drop removeNode/removeNodesByFile from O(N)

PR #980 in-line review flagged that `removeNode` iterated the full
relationshipMap to find edges touching a node (O(E)), and
`removeNodesByFile` called removeNode for every matching node after
a full nodeMap scan (O(N × E)). Pre-existing, but worth fixing
properly since the writeRel/deleteRel helpers we just added make the
index-maintenance story coherent.

Two new indexes maintained on every mutation path:

- `edgeIdsByNode: Map<nodeId, Set<relId>>` — reverse adjacency. Every
  edge records both endpoints, so removeNode iterates
  edgeIdsByNode.get(id) instead of every relationship. Self-edges
  skip the duplicate-endpoint write to keep the Set dedup explicit.
- `nodeIdsByFile: Map<filePath, Set<nodeId>>` — file index.
  removeNodesByFile reaches its file's nodes directly.

Complexity:
- removeNode: O(edges-touching-node), was O(total-edges).
- removeNodesByFile: O(file-nodes × avg-edges-per-node + scan of the
  file bucket), was O(total-nodes + file-nodes × total-edges).

Index maintenance is centralized in writeRel/deleteRel + new
addToBucket/removeFromBucket helpers. Empty buckets are pruned to
keep the indexes compact. Existing dual-invariant (relationshipMap ↔
relationshipsByType) preserved.

Nodes without a `filePath` property (e.g. Community/Cluster nodes)
are intentionally NOT indexed in nodeIdsByFile — they can't belong
to any file, so removeNodesByFile correctly leaves them alone.

Coverage: 7 new unit tests (33/33 total, was 26). Added cases:
- removes only edges touching the removed node
- handles self-edges
- removes orphan node with no edges
- removeNodesByFile removes only matching nodes
- returns 0 when no match
- also removes edges whose endpoints lived on the removed file
- does not index nodes without a filePath property

Verification: 204/204 test/integration/resolvers/python.test.ts both
REGISTRY_PRIMARY_PYTHON=0 and =1. 4235/4235 unit tests. tsc clean.

* refactor(ingestion): merge python/ast-utils into utils/ast-helpers; iterative findNodeAtRange

python/ast-utils.ts held three language-agnostic helpers
(nodeToCapture, syntheticCapture, findNodeAtRange) plus two
duplicates of the shared utils version (findChildOfType ==
findChild; findIdentifierChild was unused). Consolidating into
utils/ast-helpers.ts so the next language migrating to the
scope-resolution pipeline imports from one place.

findNodeAtRange rewritten iteratively using an explicit stack.
Previous implementation was recursive — fine for shallow Python
trees today, but a landmine for languages with deeper nesting
(Kotlin sealed-hierarchy decomposition, Rust macro expansion,
etc.) and the task hooks explicitly call out "no recursion".
Children are pushed reverse-index so LIFO pop visits them
left-to-right; row-bound pruning preserves the prior early-skip
optimization (the `break` shortcut is replaced with `continue`
since a stack can't leverage ordered sibling termination).

findChildOfType consumers migrated to the existing findChild
helper. findIdentifierChild deleted — no callers remained.

Coverage: 204/204 test/integration/resolvers/python.test.ts both
REGISTRY_PRIMARY_PYTHON=0 and =1. 339/339 scope-resolution +
graph unit tests. tsc clean.

* refactor(scope-resolution): remove unused shouldShadow / shouldCreateScope hooks

Both LanguageProvider hooks were dead weight:

- `shouldShadow` had zero call sites — the interface declared it,
  Python implemented a trivial always-true no-op, but no consumer
  ever read it. The shadowing decision lives in pythonMergeBindings
  and the central merge algorithm, not in a per-scope predicate.
- `shouldCreateScope` had one call site in pass1BuildScopes but the
  only language implementing it (Python) always returned true. No
  producer ever emits a `@scope.block` for Python, so the hook's
  "declines to create" branch was unreachable. Other languages
  didn't implement it at all.

Removing both:

- Drops the interface declarations in language-provider.ts.
- Drops `shouldCreateScope` from ScopeExtractorHooks Pick and from
  the pass1BuildScopes conditional — the stack-based parent-resolve
  loop becomes unconditional.
- Drops pythonShouldShadow / pythonShouldCreateScope from simple-hooks,
  the Python index barrel, and the python.ts provider wiring.
- Drops the tests that exercised the removed hooks: one block-
  suppression scenario in scope-extractor.test.ts, one shouldCreateScope
  test in parse-worker-scope-integration.test.ts, and the
  pythonShouldShadow / pythonShouldCreateScope always-true assertions
  in python-hooks.test.ts. pythonBindingScopeFor's delegate-to-default
  test is preserved in its own describe block.

Shadowing itself is unchanged: pythonMergeBindings still runs, LEGB
ordering still applies, wildcard transparency is still handled via
the merge precedence rules. The hook API just no longer has a
vestigial per-scope toggle we decided not to use.

Verification: 204/204 test/integration/resolvers/python.test.ts both
REGISTRY_PRIMARY_PYTHON=0 and =1. 335/335 scope-resolution + graph
unit tests (was 339, net -4 after removing the hook-specific
assertions). tsc clean.

* refactor(scope-resolution): drop dead exports surfaced by knip

Knip flagged 44+ dead exports in the PR surface. Cleanup:

Barrel deletion:
- Remove src/core/ingestion/scope-resolution/index.ts entirely.
  It re-exported 30+ symbols but only one file
  (languages/python/scope-resolver.ts) imported from it, and only
  7 symbols. Matches the project's "no barrel re-exports" preference
  and removes a drift surface. scope-resolver.ts now imports from
  concrete files (passes/mro.ts, scope/walkers.ts, contract/...).

Dead functions/interfaces removed:
- resolvePythonScope + ResolvePythonScopeInput + ResolvePythonScopeStats
  in languages/python/scope-resolver.ts — never called. pipelinePhase
  reaches pythonScopeResolver via SCOPE_RESOLVERS, not via a
  per-language entry point.
- getScopeResolver in scope-resolution/pipeline/registry.ts — had zero
  callers. Consumers read SCOPE_RESOLVERS directly.

Exports demoted to module-internal (used only within their own file):
- PYTHON_SCOPE_QUERY (query.ts) + its re-export from python/index.ts
- PROF (cache-stats.ts)
- PythonArityMetadata (arity-metadata.ts)
- ReferenceSiteSkipSet (graph-bridge/references-to-edges.ts)
- ReceiverBoundProviderSubset (passes/receiver-bound-calls.ts)
- ResolveCompoundReceiverOptions interface (passes/compound-receiver.ts)
- matchingOpenParen function (passes/compound-receiver.ts)
- followChainPostFinalize function (passes/imported-return-types.ts)
- RunScopeResolutionInput + RunScopeResolutionStats (pipeline/run.ts)

Also removed:
- Redundant `export type { Scope }` re-export from contract/scope-resolver.ts
  (consumers import Scope directly from gitnexus-shared).

Verification: knip reports zero dead exports in PR-touched files.
204/204 test/integration/resolvers/python.test.ts both flag paths.
335/335 scope-resolution + graph unit tests. tsc clean.

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2026-04-21 15:50:00 +01:00
ivkond
00966630c4
feat: cross-repo impact analysis (#794) — @repo MCP routing + group resources (#984) 2026-04-20 11:55:07 +01:00
Copilot
dfa449ef41
feat(ingestion): language-agnostic heritage extractor with config+factory pattern (#890) 2026-04-17 17:51:17 +01:00
Copilot
43098784cf
refactor(ingestion): split ImportSemantics into per-strategy hooks (Strategies 1-4) (#886)
* Initial plan

* refactor(ingestion): split ImportSemantics into per-strategy hooks

- Add ImportResolverStrategy and ImportResolutionConfig types
- Create createImportResolver factory (resolver-factory.ts)
- Add createStandardStrategy to standard.ts
- Extract per-language strategies from existing resolvers:
  goPackageStrategy, javaJvmStrategy, kotlinJvmStrategy,
  rustModuleStrategy, pythonImportStrategy, csharpNamespaceStrategy,
  phpPsr4Strategy, swiftPackageStrategy, dartPackageStrategy,
  dartRelativeStrategy, rubyRequireStrategy
- Create per-language config files in import-resolvers/configs/
- Update all 15 language providers to use createImportResolver(config)
- Add 38 unit tests for factory and strategy composition
- All 3640+ existing tests pass, tsc --noEmit passes

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* chore: remove unused resolver imports from language providers

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* docs: add error propagation note to createImportResolver JSDoc

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* refactor: consolidate strategies into configs, remove legacy resolvers

- Move all strategies from per-language files into their config files
- Remove swift.ts and vue.ts (no shared helpers needed)
- Remove legacy monolithic resolver functions from all per-language files
- Remove unused legacy wrapper functions from standard.ts
- Per-language files now only contain shared internal helpers
- Fix lint warning in languages/php.ts (no-non-null-assertion)
- Update test imports to reference configs/ instead of per-language files
- All 3262+ tests pass, tsc --noEmit passes, zero lint errors

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* refactor: address review feedback — remove dart.ts shim, JSDoc language field, update ARCHITECTURE.md

- Add JSDoc to ImportResolutionConfig.language clarifying it's
  documentation-only metadata not used by the factory
- Remove dart.ts legacy shim (was only kept for backward-compat tests)
- Rewrite dart-import-resolver.test.ts to test production strategies
  (dartPackageStrategy/dartRelativeStrategy) directly, including full
  factory composition via dartImportConfig
- Fix lint warning (no-explicit-any) by using buildSuffixIndex in makeCtx
- Update ARCHITECTURE.md to mention import-resolvers/configs/ as the
  extension point for per-language import resolution

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* fix: address review comments — revert php.ts, tighten dart test assertion

- Revert php.ts: restore stack.pop()! (the while guard guarantees non-empty)
- Tighten dart relative import test to assert exact result instead of
  permissive null-or-files check

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* refactor(ingestion): strengthen import-resolver tests and document Vue config intent

Address non-blocking follow-ups from PR #886 review:
- Add inline comment to vueImportConfig explaining intentional
  language: Vue / TypeScript-strategy mismatch (Vue SFCs are
  preprocessed into TS upstream of import resolution).
- Replace 11 tautological typeof === 'function' assertions with
  behavioral tests for goPackageStrategy, kotlinJvmStrategy, and
  csharpNamespaceStrategy, including full-chain strategy-order
  guards via createImportResolver(config).
- Apply prettier formatting to sibling configs touched during
  factory introduction.

Test: 37 passed (previously 26), tsc --noEmit clean.

* test(ingestion): tighten import-resolver assertions and close coverage gaps

Apply ce-review findings on commit f4be87fb:

- Tighten dirSuffix assertions from toContain() to exact toEqual()
  shape, catching format regressions (slash normalization, prefix
  trimming) the loose matcher would miss.
- Collapse 'if (result?.kind === "package") { expect(dirSuffix)... }'
  conditional-dead-branch pattern into single toEqual() assertions.
- Add goPackageStrategy fall-through test: module prefix matches but
  package directory contains no .go files -> null (documented branch
  in configs/go.ts:27 had no coverage).
- Honestly relabel kotlinImportConfig full-chain test as a behavioral
  smoke test rather than a strategy-order guard — standard.ts:137
  returns null for '.*' imports so reordering is not observable via
  wildcard inputs. Added Kotlin member-import test for extra coverage.
- Add behavioral tests for javaJvmStrategy, rustModuleStrategy,
  phpPsr4Strategy, swiftPackageStrategy, rubyRequireStrategy (10 tests
  across 5 describe blocks) so strategy unwiring would be caught.
- Extend makeCtx() with optional overrides: Partial<ResolveCtx['configs']>
  parameter for declarative per-test config setup.

Test: 50 passed (previously 37), tsc --noEmit clean.

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2026-04-16 19:31:44 +01:00
Gergő Magyar
0a4b31b3c5
docs: optimize context files for LLM accuracy and token efficiency (#857)
* docs: optimize context files for LLM accuracy and token efficiency

Fix factual errors across all five root context files and optimize
for LLM context window efficiency.

Corrections:
- Web UI: "runs entirely in WASM" -> thin client backed by HTTP API
- Pre-commit hook: "typecheck + tests" -> formatting + typecheck only
- MCP tools: 7 -> 16 (added api_impact, route_map, tool_map,
  shape_check, group_list/query/sync/contracts/status)
- Default serve port: 3741 -> 4747
- E2E tests: "5 tests" -> 7 spec files
- ESLint: "no config" -> eslint.config.mjs exists with TS/React rules
- npm test: "vitest run test/unit" -> "vitest run" (full suite)
- Removed nonexistent test:all script
- ci-quality.yml: added missing format + lint job descriptions
- Pipeline phase deps: added missing structure dep on mro/communities/processes
- Ingestion entry: added missing run-analyze.ts intermediate orchestrator
- Tools Quick Reference: added missing list_repos
- Group tool examples: fixed param name (group -> name)
- Removed stale vite-plugin-wasm gotcha
- Added gitnexus-shared to repository layout tables

New documentation:
- ARCHITECTURE.md: language-agnostic graph feeding (provider pattern,
  unified capture tags, import resolution tiers, chunked parse, MRO)
- ARCHITECTURE.md: full analysis flow (10 stages with progress %)
- ARCHITECTURE.md: storage layout, LadybugDB schema, embeddings, search
- ARCHITECTURE.md: DAG runner internals (Kahn's sort, dep isolation, error handling)

Token optimization:
- Removed filler prose, compressed descriptions into dense tables
- Front-loaded key facts in every section
- Eliminated redundancy between sections
- AGENTS.md: 219 -> 201 lines. ARCHITECTURE.md: 192 -> 298 lines
  (more info in fewer tokens via tables and structure)

* docs: optimize GUARDRAILS.md for LLM context efficiency

Tighten prose without losing information:
- Compressed intro, scope section, and Signs format labels
- Shortened Sign headers (removed "Sign:" prefix)
- Replaced verbose "Instruction/Reason" labels with "Do/Why"
- Removed trailing whitespace and redundant emphasis
2026-04-16 08:43:11 +01:00
Copilot
26ff700e37
refactor(pipeline): DAG-based phase architecture + container-logic extraction to LanguageProvider (#809)
* Initial plan

* refactor: move language-specific container node logic into LanguageProvider

- Add resolveEnclosingOwner hook to LanguageProviderConfig
- Add staticOwnerTypes to MethodExtractionConfig
- Implement Ruby resolveEnclosingOwner (singleton_class → class/module)
- Replace hardcoded STATIC_OWNER_TYPES with config.staticOwnerTypes
- Move Ruby static types to rubyMethodConfig
- Move Kotlin static types to kotlinMethodConfig
- Remove Ruby singleton_class branch from findEnclosingClassInfo
- Collapse seqFindEnclosingClassNode/seqFindRawEnclosingContainerNode
  into single provider-aware seqFindEnclosingOwnerNode
- Update worker path to pass provider.resolveEnclosingOwner

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* test: add regression tests for config-driven staticOwnerTypes and resolveEnclosingOwner hook

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* refactor: implement DAG-based pipeline architecture with phase extraction

Restructure the ingestion pipeline from a ~1800-line monolithic orchestrator
into a DAG (Directed Acyclic Graph) of named phases with explicit dependencies.

New files under pipeline-phases/:
- types.ts: PipelinePhase, PipelineContext, PhaseResult contracts
- runner.ts: DAG runner with topological sort validation
- scan.ts, structure.ts, markdown.ts, cobol.ts: early phases
- parse.ts + parse-impl.ts: chunked parse + resolve (the core)
- routes.ts, tools.ts, orm.ts: post-parse enrichment phases
- cross-file.ts + cross-file-impl.ts: cross-file binding propagation
- mro.ts, communities.ts, processes.ts: graph analysis phases
- index.ts: barrel export

pipeline.ts reduced from ~1960 lines to ~184 lines:
- DAG phase array declaration
- runPipelineFromRepo as thin orchestrator
- topologicalLevelSort retained for backward compat

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* test: add DAG runner unit tests, update ARCHITECTURE.md with phase DAG docs

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* fix: address code review - pass resolutionContext through parse output, fix worker URL path

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* fix: declare transitive parse dependency explicitly in mro/communities/processes phases

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* refactor: improve pipeline-phases clean code and folder structure

- Extract synthesizeWildcardImportBindings to wildcard-synthesis.ts
- Extract extractORMQueriesInline to orm-extraction.ts
- Create shared constants.ts for AST_CACHE_CAP
- Fix inline type import in orm.ts (use proper top-level import)
- Add comprehensive JSDoc to getPhaseOutput explaining type safety
- Move isDev to module level in cross-file.ts (consistency)
- Improve module-level documentation across files
- Organize barrel exports in index.ts with section comments

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* address review feedback: fix circular dep, allFetchCalls mutation, progress bugs, remove DAG naming, extract isDev, fix _item naming, fix O(n²) line calc

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* improve JSDoc on lineNumberAtOffset binary search

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* address review: filter deps in runner, move totalFiles to ctx, fix cycle JSDoc, centralize isDev, remove DAG naming

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* fix doc consistency in graph-sort.ts module-level and function-level JSDoc

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* fix(pipeline): wrap phase errors with phase name and emit terminal error progress event

Restores phase diagnostics at CLI/MCP boundary. runPipeline now wraps
phase.execute() in try/catch and rethrows with 'Phase <name> failed: ...'
preserving the original via { cause }. Also emits a terminal
{ phase: 'error' } progress event so subscribers see the failure before
the rejection propagates. Handler errors during error reporting are
swallowed to keep the original cause authoritative.

Plan: docs/plans/2026-04-13-001-fix-pipeline-dag-refactor-review-findings-plan.md (U1)

* fix(pipeline): move bindingAccumulator dispose into crossFile try/finally; make single-use

crossFile.execute() now wraps its body in try/finally so the accumulator
is released on both the happy path and when runCrossFileBindingPropagation
throws. Dev-mode telemetry stays inside the try block before dispose (all
three counters return 0 after dispose clears internal maps).

BindingAccumulator becomes single-use: appendFile after dispose now throws
'BindingAccumulator: use after dispose' instead of silently re-animating
via the old _disposed auto-clear. Docs updated; the only production
construction site (parse-impl) always creates a fresh instance per run,
so no caller relied on the re-use contract.

Residual risk documented in crossFile module JSDoc: a future phase
inserted between parse and crossFile that throws would still leak the
accumulator. Any such phase must manage accumulator lifetime explicitly.

Plan: docs/plans/2026-04-13-001-fix-pipeline-dag-refactor-review-findings-plan.md (U2)

* docs(pipeline): explain why importCtx teardown is safe before crossFile

Investigation (plan U3) confirms: `importCtx` (ImportResolutionContext)
is a scratch workspace with no downstream consumer after parse.
`resolutionContext` (returned to crossFile) is a distinct object that
owns importMap / namedImportMap / packageMap / moduleAliasMap / model,
and never closes over importCtx. cross-file-impl consumes only that
ctx via processCalls. The two confusingly-similar "context" names
were the root of the adversarial reviewer's concern — comment locks
in the invariant so the next reader sees it.

No behavioral change.

Plan: docs/plans/2026-04-13-001-fix-pipeline-dag-refactor-review-findings-plan.md (U3)

* refactor(pipeline): remove ctx.totalFiles side-channel; promote to ParseOutput

totalFiles was a hidden mutable field on PipelineContext written by
parse and read by mro/communities/processes — five reviewers flagged
this as a violation of the immutable-context invariant. Removed from
PipelineContext, which is now fully readonly, and made the implicit
temporal dep explicit: mro/communities/processes now declare 'parse'
as a dep and read totalFiles via getPhaseOutput<ParseOutput>(...).

No behavior change. Topo-sort unchanged because parse was already a
transitive dep through crossFile.

Plan: docs/plans/2026-04-13-001-fix-pipeline-dag-refactor-review-findings-plan.md (U4)

* feat(method-extractor): runtime staticOwnerTypes guard at factory chokepoint

createMethodExtractor now rejects MethodExtractionConfigs that list
companion_object / singleton_class / object_declaration in
typeDeclarationNodes but omit the matching entry from staticOwnerTypes.
Fails loudly at provider construction time instead of producing
silent isStatic=false on the 50000th file analyzed.

Opt-out convention preserved: an explicit `new Set()` (empty Set)
signals intentional exclusion and passes the guard (memory obs #30588).

All 13 existing language configs pass the guard; the new negative test
fails without it. Test-first.

Plan: docs/plans/2026-04-13-001-fix-pipeline-dag-refactor-review-findings-plan.md (U5)

* fix(pipeline): wrap sequential-fallback in try/finally so cleanup survives throws

The sequential-fallback block in runChunkedParseAndResolve now runs
inside a try/finally that guarantees astCache.clear(), accumulator
finalize, and enrichExportedTypeMap execute even if readFileContents
or processCalls throws mid-fallback. Cleanup failures are caught
inside the finally so they can't mask the original error.

Accumulator disposal ownership remains with crossFile (U2) — U6 only
adds astCache cleanup and preserves finalize ordering on the error
path.

Plan: docs/plans/2026-04-13-001-fix-pipeline-dag-refactor-review-findings-plan.md (U6)

* test(pipeline): direct unit coverage for wildcard-synthesis and cross-file-impl

Both modules previously had zero direct unit coverage — branches were
exercised only through integration tests' happy paths.

wildcard-synthesis.test.ts covers: Go graph-IMPORTS fallback, Python
moduleAliasMap build, MAX_SYNTHETIC_BINDINGS_PER_FILE cap, dedup
against existing namedImportMap entries, and empty-exportedSymbols
early return.

cross-file-impl.test.ts covers: gapRatio below threshold no-op,
MAX_CROSS_FILE_REPROCESS cap, graph-only exportedTypeMap fallback,
and empty namedImportMap short-circuit.

Tests assert current behavior — any future regression flips them.

Plan: docs/plans/2026-04-13-001-fix-pipeline-dag-refactor-review-findings-plan.md (U7)

* test(pipeline): golden-file graph-parity regression guard on mini-repo fixture

Pins the current post-P1/P2 graph output (57 symbols, 92 relationships,
4 processes, deterministic edge digest) so future silent refactors
cannot drift behavior unnoticed. If any count changes or any edge
rewires, the test fails with a readable diff listing what changed
and a copy-pasteable UPDATE_GOLDEN=1 regen command.

Edge digest keyed by symbolic (label, name, filePath) triples rather
than raw generateId output — stays meaningful across id-encoding
refactors while still catching real semantic rewiring.

Plan: docs/plans/2026-04-13-001-fix-pipeline-dag-refactor-review-findings-plan.md (U8)

* fix(pipeline): minimal cycle reporting + resolveEnclosingOwner loop safeguards

U9: runner cycle detection now reports only the SCC members via DFS
back-edge trace ('Cycle detected: A -> B -> C -> A') rather than
everything with inDegree > 0 (which mixed cycle members with blocked
dependents). Also emits the 'error' progress event for graph-
validation failures, symmetric with U1's runtime-error path.

U16: findEnclosingClassInfo now defends against language-provider
hooks that return non-container nodes — visitedContainers Set breaks
repeat-visit loops, MAX_ENCLOSING_WALK_ITERATIONS is belt-and-braces.
Documented the hook contract invariant so future provider authors
know the walk-continues-upward expectation.

Plan: docs/plans/2026-04-13-001-fix-pipeline-dag-refactor-review-findings-plan.md (U9, U16)

* refactor(pipeline): type hygiene, dead code cleanup, shared allPathSet, graph-sort naming

Bundles plan units U10, U11, U12, U14, U15:

U10 — Type hygiene: readonly ParseOutput arrays (allExtractedRoutes,
allDecoratorRoutes, allToolDefs, allORMQueries, allPaths); removed
redundant 'as string[] | undefined' cast in routes.ts and 'as URL' in
parse-impl.ts; WorkerPool is now 'import type'. Readonly contract
propagated into processORMQueries (only iterates).

U11 — Dead code & shims: deleted constants.ts shim (AST_CACHE_CAP
inlined into its sole real consumer cross-file-impl.ts; isDev
consumers now import directly from ../utils/env.js). Removed internal
utility re-exports from pipeline-phases/index.ts (no external
consumers). Removed topologicalLevelSort re-export from pipeline.ts;
updated topological-sort.test.ts to import from the canonical
utils/graph-sort.js. Stripped 'Phase 3+4:' stale JSDoc from
parse-impl.ts.

U12 — Perf: StructureOutput now carries allPathSet (ReadonlySet<string>)
built once; cobol, markdown, and cross-file-impl consume the shared
set instead of allocating their own. Parse forwards it via
ParseOutput.allPathSet; processCobol/processMarkdown widened to
ReadonlySet<string>.

U14 — graph-sort.ts: renamed local 'inDegree' to
'pendingImportsPerFile' with expanded JSDoc explaining the reverse-
graph Kahn's formulation and warning future maintainers not to
'correct' it to standard in-degree semantics. Added self-edge test.

U15 — Unconditional worker-fallback logging: removed isDev guard on
the worker-pool-creation-failure console.warn so operators can
diagnose perf degradations in production.

No behavior change. U8 golden-file test confirms pipeline output is
byte-identical.

Plan: docs/plans/2026-04-13-001-fix-pipeline-dag-refactor-review-findings-plan.md (U10, U11, U12, U14, U15)

* docs: fix ARCHITECTURE.md table integrity; bump AGENTS.md/CLAUDE.md to 1.3.0

U13 — documentation fixes:

ARCHITECTURE.md: the prior insertion of the 'Pipeline Phase DAG'
section orphaned 7 rows from the 'Where to change what' header.
Moved those 7 rows back up under their header so the table reads
contiguously; DAG section now follows the completed table.

AGENTS.md + CLAUDE.md: bumped version 1.2.0 -> 1.3.0, updated Last
reviewed to 2026-04-13, added matching Changelog row documenting
the GitNexus index stats refresh after the DAG refactor. Stat
bumps (symbols/relationships/execution flows) that were sitting
uncommitted in the working tree are now landed under a proper
changelog entry per each file's own documented schema.

Plan: docs/plans/2026-04-13-001-fix-pipeline-dag-refactor-review-findings-plan.md (U13)

* refactor(pipeline): drop spurious parse deps, true-readonly ParseOutput.exportedTypeMap, skip redundant wildcard synth

- mro/communities/processes: switch redundant `parse` dep to `structure` —
  totalFiles originates in structure, so depending on parse for it was a
  spurious data dep that obscured the real DAG.
- ParseOutput.exportedTypeMap: typed as truly ReadonlyMap<...,ReadonlyMap>>;
  graph→exports enrichment moved into parse-impl so the snapshot is
  fully populated at parse return. crossFile builds its own local mutable
  working copy for per-file re-resolution writes — no cast at the boundary.
- parse-impl: hasSynthesized flag guards the unconditional final
  synthesizeWildcardImportBindings call when per-chunk/fallback synthesis
  already ran (graph-global + idempotent across chunks).
- cross-file-impl: documented the intentional `phase: 'parsing'` progress
  label so telemetry bucketing stays consistent with the parse phase.
- cross-file-impl test: replaced the now-moved fallback-enrichment
  assertion with a stronger one — crossFile must not mutate the
  parse-supplied map.

Addresses PR #809 review pass 5 carry-overs.

---------

Co-authored-by: copilot-swe-agent[bot] <198982749+Copilot@users.noreply.github.com>
Co-authored-by: magyargergo <11230420+magyargergo@users.noreply.github.com>
Co-authored-by: Gergo Magyar <gergomagyar@icloud.com>
2026-04-13 20:31:05 +01:00
Gergő Magyar
5a7c0fdbb1
feat: same-arity overload disambiguation via type-hash suffix (#651) (#658)
* feat: same-arity overload disambiguation via type-hash suffix (#651)

Add ~type1,type2 suffix to Method/Constructor node IDs when same-arity
overloads with different parameter types exist in the same class. Also add
$const suffix for C++ const-qualified method overloads via new isConst field.

Key changes:
- typeTagForId() detects same-arity collisions and appends ~typeTag
- constTagForId() detects const/non-const collisions and appends $const
- TS/JS excluded from type-hashing (overload signatures collapse to impl body)
- Sequential findEnclosingFunction fixed: falls through on ambiguous same-class
  candidates instead of picking first; fallback path includes typeTag + constTag
- Per-call-site integration tests across Java, C#, Kotlin, C++, TypeScript
- Cross-file + chain resolution tests for all 5 languages
- C++ isConst extraction via tree-sitter type_qualifier in function_declarator

1710 integration + 18 unit tests pass.

* fix: preserve generic/template args in type-hash, perf + type safety fixes

- Add rawType field to ParameterInfo preserving full type text (vector<int>)
  while type stays simplified (vector). typeTagForId uses rawType for tags.
- Populate rawType in all 11 language method extractors
- Add buildCollisionGroups() to pre-group methods by name#arity (O(N) once
  per class instead of O(N) per method call)
- Cache method extraction in call-processor findEnclosingFunction fallback
- Fix null guards on getLanguageFromFilename in all findEnclosing paths
- Tighten SKIP_TYPE_HASH_LANGUAGES to ReadonlySet<SupportedLanguages>
- Document ID stability invariant on first overload introduction
- C++ integration tests: template overloads (vector<int> vs vector<string>),
  cross-file template + chain resolution, out-of-class method definitions

1718 integration + 20 unit tests pass.

* fix: add rawType to method-extraction unit test assertions

All 26 parameter .toEqual() assertions in method-extraction.test.ts
needed the new rawType field added to match ParameterInfo schema change.

* perf: cache tempMap/groups per class, consolidate extractFromNode

- Cache derived method map + collision groups per classNode.id in
  parsing-processor (avoids rebuild per method in same class)
- Replace per-call extractFromNode with cached class extraction +
  funcName:line lookup in call-processor fallback (avoids AST walk
  per call site)
- Remove dead clearEnclosingFunctionCache export, fix JSDoc

* test: add sequential-path integration test for same-arity overloads

Add skipWorkers option to PipelineOptions to force sequential parsing.
New test suite verifies type-hash disambiguation produces identical
results through the sequential path (parsing-processor + call-processor
findEnclosingFunction) as the worker path.
2026-04-05 21:51:55 +01:00
Gergő Magyar
0561d24efd
feat: METHOD_IMPLEMENTS edges, overload disambiguation, MethodExtractor unification (#574) (#642) 2026-04-04 18:41:47 +01:00
John R. Eakin
c68d7975e6
docs: agent development framework, GitHub templates, eval refactor (#479)
* ci: E2E workflow, web typecheck job, pre-commit hook, test suite

CI:
- ci.yml consolidated to reference ci-tests.yml
- ci-quality.yml: add typecheck-web job for gitnexus-web/
- ci-e2e.yml: E2E workflow with dorny/paths-filter (web changes only)
- ci-report.yml: remove dead integration-reports references
- CI gate allows skipped E2E status
- .gitignore: playwright artifacts, eval test artifacts

Pre-commit hook:
- .githooks/pre-commit: typecheck + unit tests for both packages
- Activated via git config core.hooksPath in prepare script

Test infrastructure:
- Vitest + React Testing Library: 58 unit tests
  (graph, server-connection, mermaid, settings, constants, utils, paths)
- Playwright E2E: 5 tests + manual recording harness
- vitest.config from vitest/config, engines.node >= 20
- Playwright artifacts retain-on-failure
- wait-on in devDependencies
- vitest/coverage-v8 aligned with vitest 4.x

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* chore: update gitnexus-web package-lock.json

Reflects devDependency additions (vitest, playwright, wait-on,
@testing-library, etc.) from package.json changes in this PR.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* fix(e2e): add missing process-list-loaded testid, increase CI timeouts

- Add data-testid="process-list-loaded" to ProcessesPanel (E2E tests
  were waiting for an element that didn't exist)
- Increase server connect timeouts from 5s to 10s for slower CI

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* fix(ci): run gitnexus-web unit tests in CI, remove unused variable

- Add gitnexus-web npm ci + vitest run to ci-tests.yml so web unit
  tests are gated by the CI status check (were only running locally)
- Remove unused IS_PLAYWRIGHT_AUTOMATION variable from E2E spec

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* fix(e2e): add process-row testid, wait for networkidle on page load

- Add data-testid="process-row" to ProcessItem component (E2E tests
  referenced it but it didn't exist in the source)
- Use waitUntil: 'networkidle' on page.goto to ensure Vite dev server
  is fully ready before interacting (fixes first-test timeout in CI)

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* fix(e2e): add process-view-button and process-highlight-button testids

E2E tests referenced these data-testid attributes but they didn't
exist in ProcessItem. All 6 E2E testids now have matching source
elements: status-ready, process-list-loaded, process-row,
process-view-button, process-highlight-button, server-url-input.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* fix(e2e): remove networkidle — Vite HMR WebSocket prevents it from resolving

networkidle waits for zero network activity for 500ms, but Vite's HMR
WebSocket stays open permanently, causing page.goto to timeout at 60s
on all tests after the first. The explicit toBeVisible waits on UI
elements are sufficient and deterministic.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* fix(e2e): wait for Server button visibility, add CI retry, all 5 tests pass locally

Root cause: test 1 clicked the Server button before React hydrated,
so the tab content never rendered and the input wasn't found.

Fixes:
- Wait for Server button toBeVisible before clicking
- Increase input wait to 15s
- Remove networkidle (Vite HMR WebSocket prevents it from resolving)
- Add retries: 1 in CI for transient cold-start flakiness

Verified locally: all 5 E2E tests pass, 198 unit tests pass, typecheck clean.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* fix(ci): tolerate LadybugDB native crash during analyze step

gitnexus analyze can crash with "double free or corruption" (known
issue #273) during the LadybugDB native addon shutdown. The index is
usually written successfully before the crash. The workflow now:
1. Allows analyze to exit non-zero with a warning
2. Verifies .gitnexus index was actually created
3. Only fails if no index exists (real failure)

All tests verified locally: 198 unit, 5 E2E pass, typecheck clean.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* fix(ci): fix shell quoting in analyze step, simplify to || true

The previous echo string had special characters that broke bash
quoting in GitHub Actions. Simplified to: analyze || true, then
check if .gitnexus exists.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: add agent development framework, GitHub templates, eval refactor

Agent framework (layered docs for AI-assisted contributions):
- AGENTS.md: canonical instructions, impact analysis, MCP tools
- CLAUDE.md: Claude Code-specific deltas and hooks
- GUARDRAILS.md: safety boundaries, non-negotiables, escalation
- ARCHITECTURE.md: monorepo layout, data flow map
- TESTING.md: test structure, commands, categories
- RUNBOOK.md: copy-paste operations for dev/CI/MCP
- llms.txt: minimal LLM context pointer

Editor integration:
- .cursor/index.mdc + rules/100-monorepo.mdc

GitHub templates:
- PR template with areas-touched checkboxes
- Bug report + feature request issue forms

Eval harness:
- Refactored mcp_bridge, tool_registry, constants
- Error sanitization utilities
- Property-based tests via Hypothesis

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* fix(eval): use format_exception instead of format_exc in sanitize_exception

format_exc() returns the currently handled exception traceback, which
may be unrelated if called outside an active except block. Using
format_exception(type(exc), exc, exc.__traceback__) reliably captures
the passed exception's traceback.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: update CONTRIBUTING.md and TESTING.md for current CI/hook setup

- CONTRIBUTING.md: add gitnexus-web typecheck command, pre-commit hook
  checklist item
- TESTING.md: add gitnexus-web typecheck command, pre-commit hook
  section (husky), update CI integration to list actual workflow files
  (ci-quality, ci-tests, ci-e2e)

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: update testing docs to reflect CI/E2E changes from PR #486

- AGENTS.md: update test counts (CLI ~2000 unit, ~1850 integration),
  add gitnexus-web testing section (198 unit, 5 E2E with commands)
- RUNBOOK.md: fix Node requirement to >=20, fix E2E local repro command
- TESTING.md: E2E uses data-testid selectors + real servers, not mocks
- .cursor/rules/100-monorepo.mdc: add web test/E2E commands

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: address context engineering review — deduplicate tokens, expand Cursor rules

- Remove ~100-line gitnexus:start block from CLAUDE.md (was duplicated from AGENTS.md)
- Fix gitnexus:start block inlined inside AGENTS.md Reference Docs bullet (doubled)
- Replace CLAUDE.md scope table with pointer to AGENTS.md (single source of truth)
- Expand .cursor/index.mdc with 5 non-negotiable safety rules for always-on context
- Add .cursor/rules/200-eval.mdc with Python/eval commands (glob-scoped to eval/**)
- Improve llms.txt with priority annotations and descriptions
- Bump version headers to 1.2.0, last-reviewed to 2026-03-24

Saves ~1,400 tokens/session with zero information loss.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
Co-authored-by: Gergő Magyar <gergomagyar@icloud.com>
2026-03-25 06:48:41 +00:00
abhigyanpatwari
8e2ee26834 docs: remove architecture docs and deep implementation details from markdown files 2026-02-21 13:00:09 +05:30
abhigyanpatwari
6ce715b62c repowiki CLI command implemented 2026-02-17 02:25:07 +05:30
abhigyanpatwari
fcbb6f9e92 standalone MCP working 2026-02-03 04:53:10 +05:30
abhigyanpatwari
4357a48fae CLI implemented, UI connection to CLI works 2026-02-02 06:08:06 +05:30
abhigyanpatwari
9b99c6baa9 haiku architecture generation with gitnexus MCP test 2026-02-01 03:02:09 +05:30
abhigyanpatwari
e3f4d4b365 updated readme 2026-01-30 04:08:55 +05:30
abhigyanpatwari
f8b4a5c31f Process Map mermaid and other UI tweaks 2026-01-29 00:03:15 +05:30