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16 commits
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fb49613a4d
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fix(ingestion): ignore emitted Next.js build output, and delete the inert public/build entry (#3018)
* fix(ingestion): ignore emitted Next.js build output, and restore the dead public/build entry `DEFAULT_IGNORE_LIST` contained `.next` — the build CACHE — but not `_next`, the emitted OUTPUT, which are different directories. A Capacitor/Cordova shell copies a built Next.js bundle to `<platform>/app/src/main/assets/public/_next/static/`, where no path segment hits the list, so the walker indexed the bundle as source. On a real mobile-wrapped Next.js app that was 256 minified chunk files, and every `Route` node the repo produced pointed at a webpack chunk rather than at source. The filename heuristics did not catch them either: they match `.bundle.`, `.chunk.`, `.generated.` and `.d.ts`, while Next.js emits hashed names like `6862-9d1cdcb99f169a06.js`. Separately, `'public/build'` had been sitting in `DEFAULT_IGNORE_LIST` matching nothing at all. That set is tested one path SEGMENT at a time, and is also read by `isHardcodedIgnoredDirectory(name)`, which receives a bare directory name — so a slash-containing member can never compare equal to anything. Rather than delete the entry and lose its intent, multi-segment paths now live in `DEFAULT_IGNORED_PATH_FRAGMENTS` and are matched against the whole path, so Remix / Laravel Mix asset output is ignored as originally intended. A guard test pins the invariant that made the dead entry possible: no member of the name set may contain a slash. Measured against a production Capacitor-wrapped Next.js app (1558 JS/TS files on disk): 256 newly ignored, none of them under `src/`, and zero files that were previously ignored become indexed. Closes #3007 Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com> * fix(ingestion): drop the inert public/build machinery, discriminate _next by segment, ignore _next on the web upload path Addresses the review findings on #3018. Remove DEFAULT_IGNORED_PATH_FRAGMENTS, hasIgnoredPathFragment and its shouldIgnorePath branch. The mechanism was correct but unreachable: all four of its match forms put a `/` or end-of-string on both sides of `build`, so a fragment match strictly implies `build` is a whole segment, which the per-segment DEFAULT_IGNORE_LIST loop already catches one branch earlier. Measured over 768,420 generated paths: 65,506 fragment matches, 0 of them decisive, 0 implication violations. `'public/build'` really was an inert member of the name set, but its paths were never unignored — bare `'build'` covered them on both sides — so the entry is deleted rather than relocated, which is the other option #3007 offered. The slash-free guard test stays; it is what stops the next slash-bearing entry from dying the same way. Add negative cases pinning that `_next` matches as a whole path segment. The previous suite could not tell a segment rule from a substring rule: replacing the entry with `normalizedPath.includes('_next')` passed all five tests, while eating `src/_nextgen/index.ts`. Rename the public/build test to what it actually pins — that deleting the inert entry changed no behavior — since it is green on both sides by design. Add `_next` to the web upload filter's EXCLUDED_DIRS. That list is the live browser ingestion path (RepoAnalyzer -> filterRepoFiles -> /api/analyze/upload) and had `.next` but not `_next`, so a Capacitor-wrapped Next.js app uploaded its entire minified tree against the server's 20000-file / 250MB caps for files the analyzer then discards. Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com> * test(ignore-service): make the single-component set guards able to fail The slash-free guard added for #3007 could not fail. It selected entry lines with startsWith("'") and read only the first quoted token per line, so 'public/build' could return as a backtick string, behind an inline block comment, as a second entry on an existing line, or via .add() and every test stayed green. Prettier and eslint miss the backtick and inline-comment forms too, so CI did not catch them either. U1: remove the duplicate '.serverless' entry so the set can be pinned to one exact number. A Set discarded it, so no ignore behaviour changes. U2/U3: replace the line-based parser with a shared single-pass scanner in test/helpers/ignore-set-source.ts, and extend the guard from DEFAULT_IGNORE_LIST to IGNORED_FILES, ROOT_ARTIFACT_DIRECTORIES and IGNORED_EXTENSIONS, which share the same single-component match contract. The scanner tracks string and comment state together because neither can be removed first: the ignore-list comments quote paths and carry an apostrophe, so matching literals before stripping comments yields phantom slash-bearing entries; and a glob string containing a comment-open sequence makes regex comment-stripping swallow the closing bracket. Only a single pass is correct in both directions. Counts are pinned exactly rather than floored — a floor cannot protect a two-member set and hides a partial parse. Shapes a source parser cannot resolve (spread, interpolation, concatenation, later .add) now throw instead of quietly reporting fewer members, and the parsed names are cross-checked against isHardcodedIgnoredDirectory so parser drift fails without exporting the set. Verified by mutation: all six fail-open spellings now turn the suite red; 187 tests pass, tsc clean. * test(ignore-service): pin that _next prunes the directory, not just its files Every measured benefit of ignoring _next comes from never enumerating the bundle tree, and no file list can observe that: anything under _next is rejected whether the walk pruned the directory or descended and rejected each file. childrenIgnored is the only observation that separates them. The existing build-output tests all call shouldIgnorePath, the leaf predicate, so a refactor moving _next to a shouldIgnorePath-only rule would keep them green while silently restoring the full walk. These assertions close that. Also pins that _next matches as a whole segment (_nextgen and my_next are still walked), and that the `!_next/` negation recovers the directory at any depth — the bare form is the one that works, since `!_next/**` alone never gets tested: childrenIgnored prunes the directory before any descendant pattern is reached. Placed in the .gitnexusignore-negation describe block, which owns mkPath and the tmpdir fixture and is registered in scripts/cross-platform-tests.ts. Verified by mutation: disabling only the pruning branch in childrenIgnored leaves the build-output suite at 26/26 green and turns these assertions red. * test(ignore-service): guard the twin build-output ignore lists against drift _next now lives in two lists in two packages — the analyzer's DEFAULT_IGNORE_LIST and the browser upload filter's EXCLUDED_DIRS — with nothing tying them together. This is the seventh twin-list pair in this repo; the header of receiver-twin-list-drift.test.ts records that the previous ones each shipped a bug when one side moved. Containment runs web -> CLI only, and that is the load-bearing direction: the browser filter decides what the server ever sees, and it reads no .gitnexusignore, so a name it drops that the analyzer would have indexed is silent source loss with no recovery. The reverse is not an error — the analyzer prunes far more aggressively than an upload needs to. .gitnexus is the one exemption and has a mechanism: the walker passes dot: false to glob, so it never enumerates dot-directories. Asserted in both directions so re-adding it to the CLI list or dropping it from the web list both fail. Both sides are source-parsed through the shared helper. DEFAULT_IGNORE_LIST is module-private, and no test in this package imports across the package boundary — every cross-package precedent reads source instead. Also corrects the documentation this PR's comments got wrong: the guard test is cited by path rather than as "below", the unreproducible per-repo percentage is gone, the reason _next is deliberately unanchored is recorded next to the entry (no <web-root>/_next form matches a root-level _next/static/…), and the upload filter now states that it consults no repository ignore rules — so unlike the CLI, a negation cannot recover what it drops. Verified by mutation: a web-only addition and a CLI removal each turn the guard red. 194 targeted tests pass; tsc clean in both packages. * refactor(test): read the ignore sets with the TypeScript parser, not a hand-rolled scanner The guards read ignore-service.ts as source because the sets are module-private. The first pass hand-rolled a character scanner to do it, and the repo already vendors the right tool: ts.createSourceFile, used this way in literal-collectors, query-determinism-guard, cli-index-help and group/sync-partial-extraction. The scanner had two silent gaps a real parser does not have: - It rejected `${` by substring, but template literals were consumed whole, so that branch could never fire and an interpolated member was accepted as a literal — the exact under-report the file refused to allow. - It took the first `[` after the marker, which on a type-annotated declaration (`readonly string[] = ...`) is the annotation's empty pair. It returned [] with no throw, which would make every assertion in a suite vacuously true. This is the hazard receiver-twin-list-drift.test.ts documents having hit. Reading the declaration node removes both, along with the comment-vs-string ordering problem that motivated the scanner: a parser cannot mistake a comment for a string or a glob's `/*` for a comment-open. Also drops the four pinned exact counts. They were a ratchet — these sets are edited by unrelated PRs, each of which would have failed a count assertion about nothing it touched — and with a real parser the partial-parse hazard they existed to catch cannot happen silently: a member that is not a plain string literal throws. Markers collapse to set names, and the duplicated path-resolution boilerplate moves into the helper the two suites already share. Net 187 deletions against 123 insertions. Verified by mutation: backtick, inline comment, same-line, double-quote, duplicate, interpolation, spread and runtime .add() are all caught; a type-annotated declaration now reads correctly instead of returning empty. 194 tests pass, tsc clean. --------- Co-authored-by: Claude Opus 5 (1M context) <noreply@anthropic.com> Co-authored-by: Gergo Magyar <gergomagyar0@gmail.com> |
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88df18b829
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fix(ingestion): discover nested source directories (#3043) | ||
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79ff44dfa9
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fix(config): honor parts negation on Windows (#2720)
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Normalize repository-relative paths before applying ignore-package rules so `.gitnexusignore` negation can override hardcoded `parts` exclusions during Windows traversal. Co-authored-by: Gergő Magyar <gergomagyar@icloud.com> |
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0f016dc467 |
fix(config): read core.excludesFile and .git/info/exclude for global ignores (#2606)
Replace the custom ~/.gitnexus/ignore file with the same two sources real git itself consults for exactly this purpose (gitignore(5)): - core.excludesFile: git's own all-repos global ignore file (defaults to $XDG_CONFIG_HOME/git/ignore when unconfigured) - $GIT_COMMON_DIR/info/exclude: per-repo, untracked, so it works without push/commit access to the repo Precedence mirrors git exactly (lowest to highest): core.excludesFile, then info/exclude, then .gitignore, then .gitnexusignore -- each later source can negate an earlier one via a `!pattern` line, same last-match-wins semantics git itself uses. Adds getCoreExcludesFilePath and getGitInfoExcludePath to git.ts, following the same execSync + git-common-dir pattern as getCanonicalRepoRoot. GITNEXUS_NO_GLOBAL_IGNORE (or noGlobalIgnore) still skips both global sources, mirroring GITNEXUS_NO_GITIGNORE. |
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a4a79ac920 | style: fix prettier formatting in ignore-service.test.ts | ||
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322e05a6be |
fix(config): add user-level global ignore file (#2606)
IgnoreService only read per-repo .gitignore/.gitnexusignore, so an exclusion meant to apply across every indexed repo had to be repeated per repo or hand-patched into node_modules (wiped on every upgrade). loadIgnoreRules now also reads a global ignore file at $GITNEXUS_HOME/ignore (default ~/.gitnexus/ignore), reusing the existing global directory that already holds registry.json and config.json. It is added first, so per-repo .gitignore/.gitnexusignore rules can still negate it, mirroring the .gitignore -> .gitnexusignore precedence already in place. GITNEXUS_NO_GLOBAL_IGNORE (or noGlobalIgnore) skips it, mirroring GITNEXUS_NO_GITIGNORE. |
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681a352006
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fix(worker): analyze native worker aborts (#1833)
* fix(analyze): avoid native aborts on generated worker bundles Retire timed-out parse workers instead of force-terminating native parser state, and skip Monaco generated worker bundles by default while preserving explicit .gitnexusignore negation overrides. Constraint: Node native tree-sitter bindings can abort the process when a timed-out worker is terminated while inside parser state. Rejected: Falling back to sequential parsing for native stalls | it can move the same native crash onto the main thread. Confidence: high Scope-risk: moderate Directive: Keep timeout recovery from force-terminating workers until they return to JS or exit naturally. Tested: npm test; npx tsc --noEmit; npm run build; targeted analyze on /Users/wangxc/Code/keep; gitnexus detect_changes --scope staged Not-tested: Node 22 LTS runtime and non-macOS platforms * fix(worker): bound retired parser worker lifetimes Keep timeout recovery from immediately terminating workers that may still be inside native parser state, while making terminal pool shutdown own retired worker cleanup so long-lived processes do not accumulate retired threads. Constraint: Claude review on PR #1833 required retiredWorkers cleanup in pool.terminate() and tripBreaker() without regressing no-immediate-terminate timeout safety. Rejected: clearing the retiredWorkers set without terminating | would remove JS bookkeeping while leaking the underlying worker thread. Confidence: high Scope-risk: moderate Directive: Preserve the distinction between recoverable timeout retirement and terminal pool shutdown; do not reintroduce immediate terminate in removeWorkerFromSlot(..., 'retire'). Tested: npx vitest run test/unit/worker-pool-timeout-retire.test.ts; npx vitest run test/unit/worker-pool-timeout-retire.test.ts test/unit/worker-pool-resilience.test.ts test/unit/worker-pool-cumulative-timeout.test.ts test/unit/worker-pool-slot-generation.test.ts; npx tsc --noEmit; npm run build; npx prettier --check src/core/ingestion/workers/worker-pool.ts test/unit/worker-pool-timeout-retire.test.ts ../docs/todo/pr-1833-retired-worker-cleanup-plan.md; npx eslint src/core/ingestion/workers/worker-pool.ts test/unit/worker-pool-timeout-retire.test.ts; gitnexus detect_changes --scope staged. Not-tested: npm test full suite did not complete green in this environment; two runs each had one unrelated test/unit/hooks.test.ts parseHookOutput null failure, and each failed hook test passed when rerun in isolation. * ci: retrigger checks Co-authored-by: Cursor <cursoragent@cursor.com> --------- Co-authored-by: wangxc <wangxc_a_bj@si-tech.com.cn> Co-authored-by: Gergő Magyar <gergomagyar@icloud.com> Co-authored-by: Test <test@example.com> Co-authored-by: Cursor <cursoragent@cursor.com> |
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2b6e7ffbd9
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fix(php): avoid Blade templates entering PHP analysis (#1790) | ||
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32b5c0e3fc
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feat: add IncludeExtractor for C++ cross-repo include tracking (group) (#1156)
* feat: add IncludeExtractor for C++ cross-repo include tracking (group) * fix: address CodeQL warnings on include-extractor - Remove unused HEADER_GLOB constant in include-extractor.ts - Use fs.mkdtempSync for secure temp dir creation in tests (CodeQL: 'Insecure temporary file') * fix(group): close missing ); in manifest-extractor include branch The 'include' branch in ManifestExtractor.resolveSymbol was missing the closing ); for the executor() call, causing a syntax error that broke ESLint, Prettier, and the full test CI on all platforms. Reported by Claude PR review on #1156. * chore: drop test/global-setup.ts + test/vitest.d.ts Upstream removed these in commit |
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d3a7ce95a5
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feat(core): adopt pino structured logger (#1336)
* feat(core): adopt pino structured logger + add no-console eslint forcing function
Adds `pino` as the project-wide structured logger via a thin wrapper at
`gitnexus/src/core/logger.ts` exposing `createLogger(name, opts?)` and a
default `logger` singleton. Migrates the only security-relevant `console.warn`
site (`bridge-db.ts` `openBridgeDbReadOnly` retry-exhaustion path) to
`bridgeLogger.debug({groupDir, err, attempts}, 'msg')`.
Pino's NDJSON output is structurally log-injection-resistant (one record per
newline, all string fields JSON-escaped) — replaces the hand-rolled
`sanitizeLogValue` pattern that PR #1329 added on the `fix/insecure-tempfile-core`
branch. PR #1329's sanitizer remains as fallback until CodeQL confirms #466
closes via pino on this branch.
Also adds an ESLint `no-console: warn` rule scoped to
`gitnexus/src/**/*.ts` (excluding `cli/`, `server/`, `test/`, `bin/`, and the
logger module itself) as the forcing function — new code can't regress.
Existing 134 sites in `core/`, `mcp/`, `config/`, `storage/` get a
`// eslint-disable-next-line no-console -- TODO(pino-migration)` marker in a
follow-up commit so lint stays clean and the remaining work is grep-able.
Operator behaviour preserved:
- `GITNEXUS_DEBUG_BRIDGE` truthy → bridgeLogger logs at debug level
- `GITNEXUS_DEBUG_BRIDGE` unset → bridgeLogger filters debug messages
- Output is NDJSON in production / CI / vitest
- pino-pretty engages only when stdout is a TTY AND CI/VITEST env unset
Tests: 11 new logger.test.ts cases (level methods, debugEnvVar gating,
destination capture, undefined Error.message safety, CR/LF/U+2028/ANSI
single-record invariant). Group test suite (388 tests) passes unchanged.
`--no-verify`: pre-commit hook fails on PR #1302's pre-existing TS regression
at `scope-resolution/pipeline/run.ts:160` on main; documented in commit
`348d0c91` and recurring across the security-fix series.
Refs: #466 (codeql js/log-injection), PR #1329 follow-up.
* chore(lint): baseline-suppress 134 existing console.* sites with TODO(pino-migration)
Mechanical pass: prepends `// eslint-disable-next-line no-console -- TODO(pino-migration)`
above each existing `console.*` call in `gitnexus/src/{config,core,mcp,storage}/`
that the new ESLint rule would otherwise flag. CLI/server are exempt at the
config level (legitimate stdout output).
Zero functional changes. Generated by an in-repo node script that consumes
`eslint --format json` output and prepends the marker line at each reported
location. Verification:
npx eslint gitnexus/src/ → 0 no-console warnings
grep -rn "TODO(pino-migration)" gitnexus/src/ | wc -l → 134
The marker tags inventory the remaining migration surface so future sweep
PRs can grep their target list. When a follow-up PR migrates a site, the
marker comment is removed alongside the `console.*` → `logger.*` swap.
`--no-verify`: same as parent commit (PR #1302 pre-existing TS regression on main).
* refactor(core): complete pino migration — replace all 134 console.* sites + flip ESLint to error
Codebase-wide sweep of every `TODO(pino-migration)` site flagged in commit
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8fbbb35718
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test(ignore-service): skip EACCES test under uid=0 (root bypasses chmod) (#1108)
The `loadIgnoreRules — error handling > warns on EACCES but does not
throw` test relies on `chmod 000` denying read access to a temporary
.gitignore file. On Linux, root bypasses POSIX read-permission checks,
so chmod 000 does NOT trigger EACCES under uid=0 — fs.readFile reads
the file anyway and loadIgnoreRules returns parsed rules instead of
the `null` the test expects.
Symptom under root: assertion fails with `Ignore { _rules: [...] }
to be null`, surfaced as a single test failure in any privileged
test environment (rootful Docker container, CI runners configured to
run tests as root, etc.).
Fix: extend the existing `skipIf(process.platform === 'win32')` guard
with `process.getuid?.() === 0`. The non-root code path still
exercises the real EACCES branch — root just can't reproduce the
failure mode the test asserts on, so skipping there is the correct
posture (matches the win32 skip's reasoning: the OS-level mechanism
the test depends on isn't available there).
Optional chaining (`getuid?.()`) keeps Windows compatibility — Node
on Windows doesn't expose `process.getuid` at all.
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ee871419e1
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feat(ingestion): GITNEXUS_INDEX_TEST_DIRS opt-in for __tests__ / __mocks__ (#771) (#1046)
* feat(ingestion): GITNEXUS_INDEX_TEST_DIRS opt-in for __tests__ / __mocks__ (#771) The DEFAULT_IGNORE_LIST hardcodes __tests__ and __mocks__ as auto-filtered directory names. The comment at ignore-service.ts:273 explicitly documents this as intentional — .gitnexusignore negation cannot override hardcoded entries. That default is right for the majority of users, but for Quality Engineering workflows where test files are the primary index target (tracing coverage via CALLS edges), there was no escape hatch short of patching the installed package. Add an opt-in env var mirroring the GITNEXUS_NO_GITIGNORE / GITNEXUS_MAX_FILE_SIZE precedent: `GITNEXUS_INDEX_TEST_DIRS=1` removes __tests__ / __mocks__ from the effective ignore set. Scope is deliberately limited to these two names — the issue asked for these specifically, and other test-adjacent entries (__snapshots__, snapshots, fixtures, .jest) remain auto-filtered unchanged. .gitnexusignore negation semantics are not touched; the env var is the orthogonal escape hatch. Implementation: new `isEffectivelyIgnoredDirectory` helper in ignore-service.ts wraps the `DEFAULT_IGNORE_LIST.has(name)` check with the env-var opt-out. Two call-sites swap: shouldIgnorePath (affects filesystem walker and wiki generator) and createIgnoreFilter.childrenIgnored (affects directory pruning during traversal). `isHardcodedIgnoredDirectory` export unchanged — its contract is "is in the raw list", which remains true for __tests__ / __mocks__ regardless of env var state (locked in by a test). Default behaviour is byte-identical for users who don't set the env var. 9 new unit tests cover default-unset, opt-in-set, scoped scope (other hardcoded entries unaffected), and the scope-discipline guard (future expansion beyond the two named dirs fails loudly). Env state restored by afterEach to prevent leakage. Closes #771. * feat(ingestion): .gitnexusignore negation overrides hardcoded DEFAULT_IGNORE_LIST (#771) Per @magyargergo's review feedback: rather than add a special-case GITNEXUS_INDEX_TEST_DIRS env var to unlock __tests__ / __mocks__, let .gitnexusignore use !pattern negation to override the hardcoded DEFAULT_IGNORE_LIST — mirroring the .gitignore mental model users already know. Implementation: - New private hasExplicitUnignore(ig, rel) helper that walks ancestor segments and uses ignore.test(path)'s `unignored` flag to detect explicit negation. Ancestor-walk is required because .gitignore negation propagates — !__tests__/ implicitly unignores every descendant, but ignore.test() only reports unignored: true on the directly-matched path. - createIgnoreFilter.ignored() and .childrenIgnored() now check hasExplicitUnignore BEFORE applying the hardcoded DEFAULT_IGNORE_LIST. If any ancestor (or the path itself) was explicitly unignored in .gitnexusignore, the hardcoded block is bypassed. - shouldIgnorePath stays pure hardcoded-list — the wiki generator and other callers without per-repo config context keep deterministic behavior. The #771 override lives only inside createIgnoreFilter, which IS called with config. Dropped: - GITNEXUS_INDEX_TEST_DIRS env var (superseded by the more general negation mechanism) - isEffectivelyIgnoredDirectory helper - Associated env-var help text and unit tests Added: - Tip in analyze --help pointing users at .gitnexusignore with !__tests__/ as the example - 8 new unit tests covering default behaviour, directory-level negation, selective overrides, generalisation (!node_modules/), non-leakage across hardcoded entries, standard non-negation rules still layering on top, and preservation of shouldIgnorePath / isHardcodedIgnoredDirectory contracts Default behaviour (no .gitnexusignore or no negation pattern) is byte-identical to pre-#771. Users who want to index an auto-filtered directory add a single !pattern line — no env var, no flag, no re-install. Closes #771. * fix(ingestion): honour re-ignore rules after .gitnexusignore negation (#771) When .gitnexusignore contains both `!__tests__/` and `__tests__/generated/`, the parent negation previously short-circuited and allowed the re-ignored child through. Consult `ig.ignores(rel)` after `hasExplicitUnignore` so a more-specific rule in the same file correctly re-ignores a subset — matching .gitignore's last-match-wins semantics. Adds a compound-pattern test locking this in. |
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10f8815639
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fix(ignore): respect negation patterns in .gitnexusignore (#654)
* fix(ignore): respect negation patterns in .gitnexusignore childrenIgnored
childrenIgnored checked `ig.ignores(rel) || ig.ignores(rel + '/')` which
short-circuited on the bare path — directory-only negation patterns like
`!iOS/` were missed because `ig.ignores('iOS')` treats the path as a file.
Now only checks with trailing slash since childrenIgnored is only called
for directories. Bare-name patterns (e.g. `local`) still match per gitignore spec.
Fixes #596
Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
* test(ignore): add edge-case for bare `!dir` negation pattern
Verifies that `!iOS` (without trailing slash) also un-ignores the iOS/
directory — confirms the `ignore` package normalizes both `!dir` and
`!dir/` forms consistently when tested with a trailing-slash path.
Addresses non-blocking review suggestion on #654.
Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
* docs(ignore): link ignore package docs for bare-name normalization
Adds references to the `ignore` package documentation in both the
childrenIgnored comment and the bare-negation test, explaining why
`!iOS` (without trailing slash) also re-includes the iOS/ directory.
Addresses non-blocking review suggestion on #654.
Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
---------
Co-authored-by: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
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bf09eab95b
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feat: configure prettier with pre-commit hook (#563)
* feat: configure prettier with pre-commit hook integration Add prettier, lint-staged, and prettier-plugin-tailwindcss at the repo root with husky pre-commit hook integration. Moves husky from gitnexus/ to root package.json for reliable hook installation. - Root package.json with prepare/format/format:check scripts - .prettierrc with endOfLine:lf and tailwindStylesheet for TW v4 - .prettierignore excluding fixtures, vendor, generated, *.d.ts, *.md - .gitattributes enforcing LF line endings for Windows consistency - Pre-commit hook uses direct node_modules/.bin/ paths (no npx) * style: apply prettier formatting to entire codebase One-time bulk format. No logic changes. Use .git-blame-ignore-revs to skip this commit in git blame. * chore: add .git-blame-ignore-revs for prettier format commit * perf: pre-commit hook runs only tests related to staged files Use vitest --related to scope test execution to tests that import the changed files, instead of running the full suite on every commit. * perf: remove vitest from pre-commit hook, keep in CI only Pre-commit now runs lint-staged + tsc only. Tests run in CI (ci-tests.yml) where they belong — keeps commits fast. * ci: add prettier format check to quality workflow PRs will now fail if code isn't formatted with prettier. |
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fbff6d08c0
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feat(ingestion): respect .gitignore and .gitnexusignore during file discovery (#231)
* feat(ingestion): respect .gitignore and .gitnexusignore during file discovery Add support for excluding files from indexing based on .gitignore and .gitnexusignore patterns. Previously, GitNexus used only a hardcoded ignore list, causing significant index pollution in repositories with git-ignored directories containing code (e.g., Docker-mounted volumes). Changes: - Add `ignore` package for gitignore-spec pattern matching - Add `loadIgnoreRules()` to parse .gitignore + .gitnexusignore - Add `createIgnoreFilter()` returning glob-compatible IgnoreLike object - Integrate filter into glob's `ignore` option for directory-level pruning - Remove post-glob `.filter()` call (now handled during traversal) The hardcoded DEFAULT_IGNORE_LIST remains as fallback for non-git repos. Closes #228 Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com> * fix(ingestion): address review feedback on ignore filtering - Distinguish ENOENT vs EACCES in loadIgnoreRules (warn on permission errors) - Add GITNEXUS_NO_GITIGNORE env var to bypass .gitignore parsing - Fix bare-name pattern matching in childrenIgnored (check both with/without trailing slash) - Rename isIgnoredDirectory to isHardcodedIgnoredDirectory for clarity - Add clarifying comments for design decisions (D2 negation, D3 dot:false redundancy) - Add tests for bare-name patterns, file-glob patterns, EACCES handling, env var Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com> * fix(ingestion): address second round of review feedback - G1: Document GITNEXUS_NO_GITIGNORE in `analyze --help` and log when active - G2: Add comment clarifying path-scurry POSIX normalization contract - G3: Add IgnoreOptions interface — env var now falls back, callers can pass `noGitignore` explicitly for testability and future CLI flag - G4: Add integration test verifying walkRepositoryPaths respects the env var Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com> * feat(ingestion): gracefully skip files with unavailable tree-sitter grammars Port unsupported language resilience from PR #301 by @jecanore. - Make Kotlin import optional (like Swift) in parser-loader and parse-worker - Add worker-local isLanguageAvailable() with filePath param for tsx distinction - Track and log skipped files per language in both sequential and worker paths - Add skippedLanguages to ParseWorkerResult for worker→main aggregation - Add isLanguageAvailable unit tests Refs: #301, #155, #228 Co-Authored-By: jecanore <juan@housingbase.io> Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com> * test(e2e): add ignore + language-skip end-to-end test with fixture repo Add a fixture repo (test/fixtures/ignore-and-skip-repo/) with .gitignore, .gitnexusignore, TypeScript source files, and a Swift file to exercise all three features end-to-end: - File discovery: verifies .gitignore excludes data/ and *.log, .gitnexusignore excludes vendor/, source files are discovered - Parsing: verifies TypeScript files produce Function nodes and DEFINES relationships, Swift files are skipped gracefully when grammar is unavailable Add the test to the standalone group in ci-integration.yml and coverage job. Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com> * fix(ci): move ignore-and-skip-e2e test to e2e group per review feedback Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com> * fix(test): use temp directory instead of fixture for e2e ignore test The fixture's .gitignore prevented data/seed.json and debug.log from being committed — these files would be missing after checkout in CI. Switch to creating the entire test structure in a temp directory via beforeAll (matching filesystem-walker.test.ts pattern). This ensures all files exist regardless of git ignore rules. Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com> * fix(test): correct graph API usage in e2e ignore test Use graph.nodes property getter instead of graph.getNodes(), and check Function node filePath instead of non-existent File nodes (File nodes are created by processStructure, not processParsing). Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com> * ci: add workflows permission to ci-integration.yml Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com> * ci: change workflows permission to write per review Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com> * ci: move workflows permission from ci-integration.yml to ci.yml caller Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com> * fix(ci): fix Claude workflows for fork PRs, remove misplaced workflows perm Three issues prevented Claude from running on fork PRs: 1. claude-code-review.yml lacked workflows:write — push failed when fork PRs modify .github/workflows/ files 2. claude.yml had no fork PR support — checked out main and couldn't fetch the fork's branch from origin 3. Cleanup step unconditionally deleted branches even when push failed, breaking the concurrent claude.yml workflow Also removes workflows:write from ci.yml's integration job — CI tests don't need that permission. The permission belongs on the claude workflows that push fork branches. Changes: - Add workflows:write to both claude workflow permissions blocks - Add fork PR detection + branch push/cleanup to claude.yml - Add step id to push-fork; cleanup only runs if push succeeded - Pass branch names via env vars to prevent shell injection (security) - Add concurrency groups to prevent race conditions between workflows - Remove misplaced workflows:write from ci.yml integration job * fix(ci): use GitHub API for fork branch refs instead of git push GITHUB_TOKEN cannot have 'workflows' permission — it's only valid for PATs and GitHub Apps. This means git push fails whenever a fork PR modifies .github/workflows/ files. Replace git push with the GitHub REST API (POST/PATCH /git/refs) to create temporary branch refs. The API creates a pointer to the already-existing PR head commit without triggering the workflow file push protection. Similarly, cleanup uses DELETE /git/refs instead of git push --delete. Also removes the invalid 'workflows: write' from permissions blocks. --------- Co-authored-by: Claude Opus 4.6 <noreply@anthropic.com> Co-authored-by: jecanore <juan@housingbase.io> Co-authored-by: Gergo Magyar <gergomagyar@icloud.com> |
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8a100a76d3 |
test: add test suite with vitest (unit + integration + fixtures)
- 59 test files covering unit and integration tests - vitest config with coverage thresholds and fork pooling - Test fixtures (mini-repo + multi-language sample code) - Add vitest + coverage-v8 to devDependencies - Add test scripts (test, test:integration, test:all, test:watch, test:coverage) - Move typescript to devDependencies where it belongs Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com> |