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6 commits

Author SHA1 Message Date
Gergő Magyar
0005574dce
docs: restructure root README, fact-check all READMEs (#2360)
* docs(readme): restructure for readability, fix stale facts

Reorganize the README so the visible page reads as a short narrative
(Quick Start -> Two Ways -> Why -> What Your Agent Gets -> Editor Setup
-> CLI -> How It Works -> Docker -> Enterprise) and move deep
operational detail into 13 collapsible <details> sections: env vars,
.gitnexusrc, Cosign/Kubernetes verification, manual MCP configs,
install troubleshooting, and extended tool examples.

Accuracy fixes verified against gitnexus/src:
- MCP tools: 17 (15 per-repo + 2 group), not 16/11+5; drop
  group_contracts/group_query/group_status (CLI + resources now, not
  tools); add check, trace, explain, pdg_query, route_map, tool_map,
  shape_check, api_impact rows from src/mcp/tools.ts
- Agent skills: 6 installed (adds Guide + CLI), not 4
- Wiki default model: minimax/minimax-m2.5, not gpt-4o-mini
- Resources: add gitnexus://setup and gitnexus://group/{name}/...
- CLI: document group impact, doctor, and the direct terminal query
  commands (query/context/impact/trace/cypher/detect-changes/check);
  note the optional branch param on per-repo tools (#2106)

Structural cleanups: dedupe the two Codex config blocks, move Community
Integrations out of the MCP setup flow, move Star History to the
bottom. No content deleted - verbose material is collapsed, not cut.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* docs: fact-check and fix the remaining READMEs

Reviewed all 9 tracked non-root READMEs against the source; fixed the
four with stale facts, left the already-accurate ones untouched
(pr-swarm-review, .claude reviewer-swarm adapter, and the three
bench/ methodology docs).

gitnexus/README.md (npm package page):
- MCP tools table: 17 tools (15 per-repo + 2 group), was 7 rows
- Resources: add gitnexus://setup and gitnexus://group/{name}/...
- Skills: 6 bundled (adds Guide + CLI) plus --skills generated ones
- Languages: add Dart (14 total) to the list and feature matrix
- Wiki default model: minimax/minimax-m2.5, not gpt-4o-mini
- Requirements: Node >= 22 (package.json engines), not >= 18
- Claude Code hooks: PreToolUse + PostToolUse
- CLI: add --skills/--skip-skills/--skip-git/--workers, doctor,
  trace, check, group impact
- Optional grammars note: include Proto, mention
  GITNEXUS_SKIP_OPTIONAL_GRAMMARS=1

gitnexus-cursor-integration/README.md:
- 17 MCP tools, was 16; skills list: all 9 bundled skills, was 5

eval/README.md:
- Model list matches configs/models/: Claude Haiku 4.5 (was
  '3.5 Haiku'), adds MiniMax M2.5 and DeepSeek
- Node.js 22+ for GitNexus, was 18+

.devcontainer/README.md:
- Add a table of contents (364 lines, ~15 sections, no navigation)

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* chore: empty commit to retrigger CI

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

---------

Co-authored-by: Claude Fable 5 <noreply@anthropic.com>
2026-07-03 08:46:59 +01:00
Shane Thurston Wijaya
4d2ed0e525
fix(eval-server): localhost now doesn't normalize into IPv4 instead lets OS decide which to bind (#1722)
* fix(eval-server): localhost now doesn't normalize into IPv4 instead lets OS decide which to bind

* fix(eval-server): EADDRNOTAVAIL now treats as potential IPv6

* test(eval-server): new integration test for --host localhost

* docs(eval-server): updated eval/README.md based on latest update

* fix(eval-server): clarify EADDRNOTAVAIL diagnostic, guard server.address(), and soften localhost docs
2026-05-20 16:14:13 +01:00
Shane Thurston Wijaya
33f18ceaa2
feat(eval-server): added --host for user configured host IP instead of system hardcoded IP (127.0.0.1) (#1667)
* feat(eval-server): added --host for user configured host IP instead of system hardcoded IP (127.0.0.1)

* fix(eval-server): localhost value in --host now returns 127.0.0.1 instead of the raw input to fix wrong address, handled error for ipv6 disabled containers

* feat(eval-server): add --host flag with validation and error handling

  Co-Authored-By: Val Vladescu <val.vladescu@thirdbridge.com>

* fix(eval-server): bracketed IPv6 addresses to remove ambiguity

* docs(eval-server): document --host flag, READY signal format, and parser migration note

* fix(eval-server): use actual bound port in READY signal; strengthen --host e2e tests

  Co-Authored-By: Val Vladescu <val.vladescu@thirdbridge.com>

* feat(eval): wire eval-server --host through gitnexus_docker.py

* docs(eval): added guidance for docker user

* docs(eval): revise the imprecise documentation

* fix(e2e): updated original stdout for new format
2026-05-18 16:00:42 +01:00
John R. Eakin
c68d7975e6
docs: agent development framework, GitHub templates, eval refactor (#479)
* ci: E2E workflow, web typecheck job, pre-commit hook, test suite

CI:
- ci.yml consolidated to reference ci-tests.yml
- ci-quality.yml: add typecheck-web job for gitnexus-web/
- ci-e2e.yml: E2E workflow with dorny/paths-filter (web changes only)
- ci-report.yml: remove dead integration-reports references
- CI gate allows skipped E2E status
- .gitignore: playwright artifacts, eval test artifacts

Pre-commit hook:
- .githooks/pre-commit: typecheck + unit tests for both packages
- Activated via git config core.hooksPath in prepare script

Test infrastructure:
- Vitest + React Testing Library: 58 unit tests
  (graph, server-connection, mermaid, settings, constants, utils, paths)
- Playwright E2E: 5 tests + manual recording harness
- vitest.config from vitest/config, engines.node >= 20
- Playwright artifacts retain-on-failure
- wait-on in devDependencies
- vitest/coverage-v8 aligned with vitest 4.x

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* chore: update gitnexus-web package-lock.json

Reflects devDependency additions (vitest, playwright, wait-on,
@testing-library, etc.) from package.json changes in this PR.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* fix(e2e): add missing process-list-loaded testid, increase CI timeouts

- Add data-testid="process-list-loaded" to ProcessesPanel (E2E tests
  were waiting for an element that didn't exist)
- Increase server connect timeouts from 5s to 10s for slower CI

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* fix(ci): run gitnexus-web unit tests in CI, remove unused variable

- Add gitnexus-web npm ci + vitest run to ci-tests.yml so web unit
  tests are gated by the CI status check (were only running locally)
- Remove unused IS_PLAYWRIGHT_AUTOMATION variable from E2E spec

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* fix(e2e): add process-row testid, wait for networkidle on page load

- Add data-testid="process-row" to ProcessItem component (E2E tests
  referenced it but it didn't exist in the source)
- Use waitUntil: 'networkidle' on page.goto to ensure Vite dev server
  is fully ready before interacting (fixes first-test timeout in CI)

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* fix(e2e): add process-view-button and process-highlight-button testids

E2E tests referenced these data-testid attributes but they didn't
exist in ProcessItem. All 6 E2E testids now have matching source
elements: status-ready, process-list-loaded, process-row,
process-view-button, process-highlight-button, server-url-input.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* fix(e2e): remove networkidle — Vite HMR WebSocket prevents it from resolving

networkidle waits for zero network activity for 500ms, but Vite's HMR
WebSocket stays open permanently, causing page.goto to timeout at 60s
on all tests after the first. The explicit toBeVisible waits on UI
elements are sufficient and deterministic.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* fix(e2e): wait for Server button visibility, add CI retry, all 5 tests pass locally

Root cause: test 1 clicked the Server button before React hydrated,
so the tab content never rendered and the input wasn't found.

Fixes:
- Wait for Server button toBeVisible before clicking
- Increase input wait to 15s
- Remove networkidle (Vite HMR WebSocket prevents it from resolving)
- Add retries: 1 in CI for transient cold-start flakiness

Verified locally: all 5 E2E tests pass, 198 unit tests pass, typecheck clean.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* fix(ci): tolerate LadybugDB native crash during analyze step

gitnexus analyze can crash with "double free or corruption" (known
issue #273) during the LadybugDB native addon shutdown. The index is
usually written successfully before the crash. The workflow now:
1. Allows analyze to exit non-zero with a warning
2. Verifies .gitnexus index was actually created
3. Only fails if no index exists (real failure)

All tests verified locally: 198 unit, 5 E2E pass, typecheck clean.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* fix(ci): fix shell quoting in analyze step, simplify to || true

The previous echo string had special characters that broke bash
quoting in GitHub Actions. Simplified to: analyze || true, then
check if .gitnexus exists.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: add agent development framework, GitHub templates, eval refactor

Agent framework (layered docs for AI-assisted contributions):
- AGENTS.md: canonical instructions, impact analysis, MCP tools
- CLAUDE.md: Claude Code-specific deltas and hooks
- GUARDRAILS.md: safety boundaries, non-negotiables, escalation
- ARCHITECTURE.md: monorepo layout, data flow map
- TESTING.md: test structure, commands, categories
- RUNBOOK.md: copy-paste operations for dev/CI/MCP
- llms.txt: minimal LLM context pointer

Editor integration:
- .cursor/index.mdc + rules/100-monorepo.mdc

GitHub templates:
- PR template with areas-touched checkboxes
- Bug report + feature request issue forms

Eval harness:
- Refactored mcp_bridge, tool_registry, constants
- Error sanitization utilities
- Property-based tests via Hypothesis

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* fix(eval): use format_exception instead of format_exc in sanitize_exception

format_exc() returns the currently handled exception traceback, which
may be unrelated if called outside an active except block. Using
format_exception(type(exc), exc, exc.__traceback__) reliably captures
the passed exception's traceback.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: update CONTRIBUTING.md and TESTING.md for current CI/hook setup

- CONTRIBUTING.md: add gitnexus-web typecheck command, pre-commit hook
  checklist item
- TESTING.md: add gitnexus-web typecheck command, pre-commit hook
  section (husky), update CI integration to list actual workflow files
  (ci-quality, ci-tests, ci-e2e)

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: update testing docs to reflect CI/E2E changes from PR #486

- AGENTS.md: update test counts (CLI ~2000 unit, ~1850 integration),
  add gitnexus-web testing section (198 unit, 5 E2E with commands)
- RUNBOOK.md: fix Node requirement to >=20, fix E2E local repro command
- TESTING.md: E2E uses data-testid selectors + real servers, not mocks
- .cursor/rules/100-monorepo.mdc: add web test/E2E commands

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: address context engineering review — deduplicate tokens, expand Cursor rules

- Remove ~100-line gitnexus:start block from CLAUDE.md (was duplicated from AGENTS.md)
- Fix gitnexus:start block inlined inside AGENTS.md Reference Docs bullet (doubled)
- Replace CLAUDE.md scope table with pointer to AGENTS.md (single source of truth)
- Expand .cursor/index.mdc with 5 non-negotiable safety rules for always-on context
- Add .cursor/rules/200-eval.mdc with Python/eval commands (glob-scoped to eval/**)
- Improve llms.txt with priority annotations and descriptions
- Bump version headers to 1.2.0, last-reviewed to 2026-03-24

Saves ~1,400 tokens/session with zero information loss.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
Co-authored-by: Gergő Magyar <gergomagyar@icloud.com>
2026-03-25 06:48:41 +00:00
Candido Sales Gomes
5a5850832c
refactor: migrate from KuzuDB to LadybugDB v0.15 (#275)
* refactor: migrate from KuzuDB to LadybugDB v0.15

KuzuDB was archived (Apple acquisition, Oct 2025). LadybugDB is the
community fork with full API compatibility.

- Package swap: kuzu → @ladybugdb/core, kuzu-wasm → @ladybugdb/wasm-core
- Rename all internal paths: kuzu → lbug (adapters, schema, storage)
- Storage path: .gitnexus/kuzu → .gitnexus/lbug (with auto-cleanup)
- Add explicit VECTOR extension loading (required in v0.15)
- Update CI workflow, documentation, and all tests
- 1151 unit + 27 integration tests passing

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* fix: address code review findings (P1-P3)

P1: Fix WASM adapter to use getAll() API, wire cleanupOldKuzuFiles
into analyze command, add symlink path traversal protection.
P2: Cache VECTOR extension load state, batch augmentation engine
queries (20→4), fix web getCopyQuery for multi-language tables,
fix stale KuzuDB references, correct brainstorm package names.
P3: Complete lbug-wasm.d.ts type declarations, batch semantic
search per-label, update stale BM25 comment.

* chore: remove outdated KuzuDB migration brainstorming document

* fix: load FTS extension in MCP pool adapter on init

The read-only pool adapter never loaded the FTS extension, so all
QUERY_FTS_INDEX calls failed silently. This broke search-pool and
augmentation integration tests, and caused empty results in the
web UI server mode.

* feat: implement shared Database caching and connection reference counting

* feat: enhance KuzuDB migration handling and status reporting

* fix: mock cleanupOldKuzuFiles in local backend callTool tests

* fix: update mock for cleanupOldKuzuFiles and adjust imports in callTool tests

---------

Co-authored-by: Claude Opus 4.6 <noreply@anthropic.com>
2026-03-15 15:53:01 +00:00
abhigyanpatwari
6ce715b62c repowiki CLI command implemented 2026-02-17 02:25:07 +05:30