* feat: configure prettier with pre-commit hook integration
Add prettier, lint-staged, and prettier-plugin-tailwindcss at the repo
root with husky pre-commit hook integration. Moves husky from
gitnexus/ to root package.json for reliable hook installation.
- Root package.json with prepare/format/format:check scripts
- .prettierrc with endOfLine:lf and tailwindStylesheet for TW v4
- .prettierignore excluding fixtures, vendor, generated, *.d.ts, *.md
- .gitattributes enforcing LF line endings for Windows consistency
- Pre-commit hook uses direct node_modules/.bin/ paths (no npx)
* style: apply prettier formatting to entire codebase
One-time bulk format. No logic changes.
Use .git-blame-ignore-revs to skip this commit in git blame.
* chore: add .git-blame-ignore-revs for prettier format commit
* perf: pre-commit hook runs only tests related to staged files
Use vitest --related to scope test execution to tests that import
the changed files, instead of running the full suite on every commit.
* perf: remove vitest from pre-commit hook, keep in CI only
Pre-commit now runs lint-staged + tsc only. Tests run in CI
(ci-tests.yml) where they belong — keeps commits fast.
* ci: add prettier format check to quality workflow
PRs will now fail if code isn't formatted with prettier.
* feat: add markdown file indexing (headings + cross-links)
Parse .md/.mdx files using regex (no tree-sitter dependency) to extract:
- Section nodes from headings (h1-h6) with hierarchy via CONTAINS edges
- Cross-file IMPORTS edges from markdown links to other repo files
Ported from #286 to resolve conflicts with kuzu→lbug rename.
Co-Authored-By: Dennis Palatov <dp-web4@users.noreply.github.com>
Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
* fix: add Section to NODE_TABLES and NODE_SCHEMA_QUERIES
The Section schema was defined but not registered in NODE_TABLES or
NODE_SCHEMA_QUERIES, so the table was never created in the database.
Also adds missing FROM File TO Section relation entry.
Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
* fix: update schema test counts for Section node type
NODE_TABLES: 27→28, NODE_SCHEMA_QUERIES: 27→28, SCHEMA_QUERIES: 29→30
Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
* test: add diagnostic output to skills-e2e idempotency test
Show stdout/stderr in assertion message so CI failures reveal
why the second analyze --skills run exits with code 1.
Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
* fix: add Section COPY query with level column in lbug-adapter
Section table has 8 columns (includes level) but getCopyQuery fell
through to the default 7-column multi-language path. Adds explicit
Section cases to getCopyQuery and insertNodeToLbug/upsertNodeToLbug.
Error was: COPY failed for Section: Number of columns mismatch. Expected 7 but got 8.
---------
Co-authored-by: Dennis Palatov <dp-web4@users.noreply.github.com>
* calm fix 4 adding skills to repo [ISSUE #140]
* inspect
* unit and integration tests
* fixed hardcoded cohesion miss
* e2e tests for --skills flag for langauge/repo support
* Cohesion test e2e tests
