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25 commits

Author SHA1 Message Date
Copilot
1a597f3cc6
Fix npm arborist crash caused by tree-sitter-dart tarball URL format (#820)
* Initial plan

* fix: change tree-sitter-dart from tarball URL to git URL to fix npm arborist crash, add error handling and troubleshooting docs

Agent-Logs-Url: https://github.com/abhigyanpatwari/GitNexus/sessions/382c76c6-89c3-463a-8631-2a5d6510be4c

Co-authored-by: magyargergo <11230420+magyargergo@users.noreply.github.com>

* refine error handler patterns and troubleshooting docs for arborist crash

Agent-Logs-Url: https://github.com/abhigyanpatwari/GitNexus/sessions/909b319b-c367-40aa-8033-32dfb6231d4e

Co-authored-by: magyargergo <11230420+magyargergo@users.noreply.github.com>

* style: run prettier on changed files

Agent-Logs-Url: https://github.com/abhigyanpatwari/GitNexus/sessions/50eb6b94-9300-4bf2-9b61-c2d78f637fc6

* fix: use github: shorthand for tree-sitter-dart to avoid SSH in CI

Agent-Logs-Url: https://github.com/abhigyanpatwari/GitNexus/sessions/2ce3f4b3-4c1e-4c39-b824-c25cfe145529

Co-authored-by: magyargergo <11230420+magyargergo@users.noreply.github.com>

* revert: use git+https:// for tree-sitter-dart instead of github: shorthand (fixes arborist crash from PR #811)

Agent-Logs-Url: https://github.com/abhigyanpatwari/GitNexus/sessions/b786b68d-6c76-4054-88eb-ad46ea9f5b81

Co-authored-by: magyargergo <11230420+magyargergo@users.noreply.github.com>

---------

Co-authored-by: copilot-swe-agent[bot] <198982749+Copilot@users.noreply.github.com>
Co-authored-by: magyargergo <11230420+magyargergo@users.noreply.github.com>
2026-04-14 08:57:29 +01:00
ivkond
4fed097abb feat(group): add sync pipeline, CLI, MCP tools, and monorepo fixture
Wire extractors into the sync pipeline with service boundary detection.
GroupService provides high-level API for all group operations.

- Sync pipeline: orchestrates extraction (HTTP, gRPC, topics) with
  service boundary assignment and exact matching
- GroupService: groupList, groupSync, groupContracts, groupQuery,
  groupStatus (groupImpact deferred to cross-repo follow-up PR)
- CLI: group create/add/remove/list/sync/contracts/query/status
- MCP tools: group_list, group_sync, group_contracts, group_query,
  group_status
- Monorepo fixture: 3 services (auth/orders/gateway) connected via
  gRPC + Kafka + HTTP — all intra-repo cross-links discovered
- Documentation: CLI commands and MCP tools added to both READMEs

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
2026-04-02 00:40:31 +03:00
Gabriel J Campbell
b03413dcf9
feat: added skip-agents-md cli flag (#517)
* feat: added skip-agents-md cli flag

* fix: apply prettier formatting

* feat: added skip-agents-md cli flag

* fix: apply prettier formatting

* feat: add skipAgentsMd option to skip AGENTS.md and CLAUDE.md updates

* fixed bad merge
2026-03-28 21:23:59 +00:00
Oleg Deezus
cde3858e03
refactor: Phase 8 & 9 — Field Types and Return-Type Binding (#494)
* feat(phase8): add field type data structures and extractor interface

* feat(phase8): implement TypeScript field extractor

* feat-phase9-add-call-result-binding

* test-phase8-add-field-extraction-unit-tests

* docs: update documentation for Phase 8 and Phase 9

* feat(swift): Phase 8/9 integration tests for field-type and call-result binding

Add Swift field-type resolution and call-result binding integration tests
with fixtures, plus merge-conflict fixes for the FieldExtractor code.

**Swift integration tests:**
- `swift-field-types/` fixture (Models.swift + App.swift) — tests
  HAS_PROPERTY edges, field-chain CALLS resolution (user.address.save()
  → Address#save), and ACCESSES edges for field reads.
- `swift-call-result-binding/` fixture — tests call-result binding
  (let user = getUser(); user.save() → User#save).
- 2 new describe blocks in swift.test.ts with skipIf(!swiftAvailable).

**Swift arity fix:**
- extractMethodSignature fallback counts direct `parameter` children
  when no wrapper list node exists (Swift's tree-sitter grammar places
  parameters as direct children of function_declaration).  Without this,
  all Swift functions had parameterCount: 0 and the arity filter rejected
  valid call targets.

**FieldExtractor merge-conflict fixes:**
- field-extractor.ts: update import from removed ./utils.js to
  ./utils/ast-helpers.js; use typeEnv.fileScope() instead of .get('').
- field-extractors/typescript.ts: same import fix.
- field-types.ts: alias TypeEnvironment as TypeEnv (renamed on main).
- field-extraction.test.ts: mock TypeEnvironment interface properly.

* feat(field-extractors): generic table-driven field extractors for all 14 languages, wired into pipeline

Implements field extractors for all supported languages and integrates
them into the ingestion pipeline as the single source of truth for
Property node metadata.

**Generic field extractor factory** — `field-extractors/generic.ts`
defines a `createFieldExtractor(config)` factory that generates
FieldExtractor instances from a per-language `FieldExtractionConfig`.
Each config specifies AST node types, name/type/visibility extraction
functions, and static/readonly detection — typically 20-40 lines per
language vs 300+ for a hand-written extractor.

**Per-language configs** — `field-extractors/configs/` has 11 config
files covering 13 languages (TS/JS share, Java/Kotlin share).
TypeScript keeps its hand-written extractor for richer handling.

**LanguageProvider integration** — New optional `fieldExtractor` property
on LanguageProviderConfig, set via defineLanguage() in each language
file. Follows the same strategy pattern as typeConfig, exportChecker,
and labelOverride.  Removed the separate FieldExtractorRegistry class
and field-extractors/index.ts — extractors are accessed via
getProvider(lang).fieldExtractor.

**Pipeline wiring** — Both parse-worker.ts (worker pool) and
parsing-processor.ts (sequential fallback) now call the FieldExtractor
during Property node creation. Results are cached per class node.
Property nodes are enriched with: declaredType, visibility, isStatic,
isReadonly.

**extractPropertyDeclaredType removed** — The 100-line multi-strategy
function in type-extractors/shared.ts is replaced by the FieldExtractor.
All 14 languages register an extractor, eliminating the need for a
generic fallback.  The Python config's extractType was fixed to handle
annotation-without-value patterns (address: Address).

**Integration tests** — Each language's resolver test file gains
pipeline-based assertions verifying visibility/isStatic/isReadonly on
Property nodes via getNodesByLabelFull.  Tests run through
runPipelineFromRepo with real fixtures — no direct extractor calls.

* fix(type-env): thread enclosingFunctionFinder through scope resolution, unskip Dart ACCESSES test

The type-env's findEnclosingScopeKey had the same Dart sibling problem
as findEnclosingFunction — it walked parents but never found
function_signature because the call lives inside function_body (a
sibling).  Instead of hardcoding a function_body check, thread the
provider's enclosingFunctionFinder hook through BuildTypeEnvOptions →
lookupInEnv → findEnclosingScopeKey.  All three buildTypeEnv call sites
(call-processor, parsing-processor, parse-worker) now pass the hook.

This enables the type-env to resolve scoped parameter bindings for Dart
(e.g., `user: User` in processUser), which lets the chain-resolution
tier (Step 1c) walk `user.address` and emit ACCESSES edges.

Dart integration test unskipped — 10/10 passing including ACCESSES.
Reverted CHANGELOG.md to origin/main.

* fix: resolve all PR #494 review findings (10 items)

CRITICAL:
- parse-worker.ts: classNode: any → SyntaxNode on getFieldInfo
  and findEnclosingClassNode; removed redundant as number casts
- parsing-processor.ts: classNode: any → SyntaxNode on seqGetFieldInfo

HIGH:
- ruby.ts: attr_accessor now extracts ALL symbol arguments via
  extractNames hook in generic factory (was firstNamedChild only)
- typescript.ts: added JSDoc explaining why hand-written extractor
  coexists with config-based typescript-javascript.ts

MEDIUM:
- field-types.ts: FieldVisibility union type replaces string
  ('public'|'private'|'protected'|'internal'|'package'|'fileprivate'|'open')
  Propagated through field-extractor.ts, generic.ts, all 7 config files
- typescript.ts: extractFullType collapsed from 12 branches to 3 lines
- generic.ts: added extractNames? optional hook + buildField refactor

LOW:
- ruby.ts: extractVisibility(node) → extractVisibility(_node)
- python.ts: fixed misleading isStatic comment

TypeScript compiles cleanly.

* test: add 24 field extraction tests for generic factory + 5 languages

Generic factory (4 tests):
- createFieldExtractor with TypeScript config validates factory itself
- Body discovery for interfaces, static/readonly modifiers
- Non-type node rejection

Python (4 tests):
- Annotated class field extraction
- Underscore-based visibility: _name=protected, __name=private

Go (5 tests):
- isTypeDeclaration on type_declaration nodes
- Config functions: uppercase=public, lowercase=package visibility
- extractType, isStatic, isReadonly

C++ (5 tests):
- public/private/protected access specifier backward-sibling walk
- Default visibility: class=private, struct=public
- static/const modifier detection

Ruby (6 tests):
- attr_accessor multi-symbol: :name, :email, :age → 3 fields
- attr_reader=readonly, attr_writer=non-readonly
- Multiple attr_* calls in one class

Total: 46 tests passing

* chore: remove plan doc from PR

---------

Co-authored-by: Gergo Magyar <gergomagyar@icloud.com>
2026-03-26 16:37:34 +00:00
Zander Raycraft
6fabd7a2df
Merge pull request #402 from adonisdoda/feat/index-cli 2026-03-25 20:22:21 -05:00
Zander Raycraft
3961ad01cf updating windows support 2026-03-23 17:33:32 -05:00
Zander Raycraft
a3fac2f672
Merge pull request #395 from zm2231/feat/http-embedding-backend 2026-03-22 21:47:53 -05:00
adonis
c1996f45d8 feat(cli): add 'index' command to register existing .gitnexus/ folder 2026-03-20 19:16:09 -03:00
zm2231
7dcafb647b fix: address review feedback — timeout, retry, guards, tests
- Add AbortSignal.timeout(30s) on all fetch calls
- Add retry with backoff for 429/5xx (core: 2 retries, MCP: 1 retry)
- Guard initEmbedder() and getEmbedder() to throw in HTTP mode
- Discard cached embeddings on dimension mismatch during incremental re-index
- Add MCP embedQuery retry for transient failures
- Add 16 unit tests covering both core and MCP HTTP paths
- Fix README: concise, accurate env var docs
2026-03-20 01:32:49 -04:00
Dmytro Semchuk
a7b8c302d4
Merge branch 'main' into feat/codex-support 2026-03-19 10:24:45 +01:00
Candido Sales Gomes
5a5850832c
refactor: migrate from KuzuDB to LadybugDB v0.15 (#275)
* refactor: migrate from KuzuDB to LadybugDB v0.15

KuzuDB was archived (Apple acquisition, Oct 2025). LadybugDB is the
community fork with full API compatibility.

- Package swap: kuzu → @ladybugdb/core, kuzu-wasm → @ladybugdb/wasm-core
- Rename all internal paths: kuzu → lbug (adapters, schema, storage)
- Storage path: .gitnexus/kuzu → .gitnexus/lbug (with auto-cleanup)
- Add explicit VECTOR extension loading (required in v0.15)
- Update CI workflow, documentation, and all tests
- 1151 unit + 27 integration tests passing

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* fix: address code review findings (P1-P3)

P1: Fix WASM adapter to use getAll() API, wire cleanupOldKuzuFiles
into analyze command, add symlink path traversal protection.
P2: Cache VECTOR extension load state, batch augmentation engine
queries (20→4), fix web getCopyQuery for multi-language tables,
fix stale KuzuDB references, correct brainstorm package names.
P3: Complete lbug-wasm.d.ts type declarations, batch semantic
search per-label, update stale BM25 comment.

* chore: remove outdated KuzuDB migration brainstorming document

* fix: load FTS extension in MCP pool adapter on init

The read-only pool adapter never loaded the FTS extension, so all
QUERY_FTS_INDEX calls failed silently. This broke search-pool and
augmentation integration tests, and caused empty results in the
web UI server mode.

* feat: implement shared Database caching and connection reference counting

* feat: enhance KuzuDB migration handling and status reporting

* fix: mock cleanupOldKuzuFiles in local backend callTool tests

* fix: update mock for cleanupOldKuzuFiles and adjust imports in callTool tests

---------

Co-authored-by: Claude Opus 4.6 <noreply@anthropic.com>
2026-03-15 15:53:01 +00:00
Gergő Magyar
62242d5f44
feat: TypeEnvironment API with constructor inference, self/this/super resolution (#274)
* feat(type-env): constructor-call type inference for TypeEnv (Phase 1)

Add extractInitializer as a Tier 1 fallback in buildTypeEnv: when a
declaration node has no explicit type annotation, infer the type from
constructor-call patterns (new X(), X::new(), X::default(), $x = new X()).

Languages covered: TypeScript/JS, Java (var), Rust, PHP, C++ (auto).
Python/Kotlin/Swift deferred — need symbol-table access to distinguish
class constructors from function calls.

Adds 20 new unit tests covering constructor inference, annotation
precedence, and known limitations across all supported languages.

* fix(type-env): class-aware constructor resolution, multi-declarator fix

- Add collectClassNames pre-scan: walks AST to build Set<string> of
  class/struct names defined in the file
- C++ extractInitializer uses classNames.has() to verify identifier is
  a known class before inferring (auto x = User() resolves, auto x =
  getUser() does not — no false positives)
- Add InitializerExtractor type that receives classNames parameter
- Fix env.size gating: always call extractInitializer when available,
  so mixed declarators like const a: A = x, b = new B() resolve both
- Add env.has() guard in Java extractInitializer to skip already-bound vars
- Document Rust new/default whitelist rationale
- Pin all test assertions, add mixed multi-declarator test case

* fix(type-env): resolve Self/self/static/parent to actual type names

- Rust: Self::new()/Self::default() resolves to enclosing impl type
- PHP: new self()/static() resolves to enclosing class, parent() to superclass
- Rust: Tier 0 annotation guard prevents overwrite by constructor inference
- Rust: mut_pattern handling in extractVarName for let mut bindings
- TS: fix misleading comment in extractInitializer
- 58 tests passing (3 new Self/self resolution tests)

* perf(type-env): single-pass AST walk with closure-scoped state

Refactors buildTypeEnv to use closures instead of passing mutable state
as parameters. classNames, env, and config are captured by the inner
walk and extractTypeBinding functions — no parameter mutation.

- Eliminates separate collectClassNames pre-scan (O(2n) → O(n))
- config looked up once per file instead of per-node
- 29 fewer lines

* feat(type-env): constructor-inferred type resolution for all languages

Add cross-file constructor type inference to the ingestion pipeline,
enabling receiver-type disambiguation for member calls like
`user.save()` when the variable is assigned from a constructor without
explicit type annotations.

Pipeline changes:
- Add extractInitializer to Python and Swift type extractors
- Add CONSTRUCTOR_BINDING_SCANNERS for Python, Swift, C/C++ in type-env
- Wire constructorBindings through parse-worker → parsing-processor →
  pipeline → processCallsFromExtracted
- Rewrite resolveCallTarget receiver-type filtering (step D) to use
  tiered import resolution (same-file → import-scoped → global) before
  falling back to fuzzy ownerId matching
- Use collectTieredCandidates for constructor binding verification
  instead of raw lookupFuzzy

Bug fixes:
- Fix C++ inline method query: @definition.method was captured on
  field_declaration_list instead of function_definition, causing wrong
  parameterCount for all inline class methods
- Fix parse-worker accumulated/flush results missing constructorBindings

CI changes:
- Add swift.test.ts to ci-integration pipeline group and coverage job
- Update ci-report to fetch base branch (main) coverage for delta
  reporting instead of showing config thresholds
- Add per-suite timing breakdown table (unit/integration/total)
- Add expandable skipped test details section

Tests: 288 passed, 4 skipped (swift — macOS only) across 10 languages
- 36 new constructor-inferred integration tests (4 per language)
- 10 fixture directories with cross-file constructor patterns
- TypeScript, JavaScript, Java, Kotlin, Python, PHP, Rust, Go, C++, Swift

* fix(type-extractors): add type assertion for LanguageTypeConfig

* feat(ruby): constructor-inferred type resolution and self-receiver mapping

Add Ruby User.new constructor binding scanner to type-env, enabling
receiver-type disambiguation for member calls like user.save vs repo.save.
Add self/this → enclosing class resolution in lookupTypeEnv so self.method()
calls resolve to the correct class even when the method name is ambiguous.

* docs: update README with constructor inference and self/this resolution details

* refactor(ingestion): unified ResolutionContext replaces fragmented map passing

Introduce createResolutionContext() as the single resolution API for all
processors. Eliminates duplicated tier-selection logic, fixes heritage
namedImportMap bug, and adds per-file resolution caching.

- NEW resolution-context.ts: closure-factory with resolve(), per-file cache,
  TIER_CONFIDENCE constant, and shared ResolutionTier type
- DELETE symbol-resolver.ts: zero production importers, logic now in
  resolution-context.ts
- call-processor: all functions take ctx instead of 6 separate maps,
  collectTieredCandidates removed (ctx.resolve replaces it),
  D4 redundant re-resolve eliminated
- heritage-processor: takes ctx, resolveHeritageId helper extracts
  repeated 14-line fallback pattern, namedImportMap now included
- import-processor: takes ctx, dead createImportMap/createPackageMap/
  createNamedImportMap factories removed
- pipeline: creates single ctx, wires onProgress to all processors,
  logs cache hit rate in dev mode
- Tier renamed: unique-global → global (honest about returning all candidates)
- Tests migrated: 1178 unit + 84 integration passing

* feat(type-env): self/this/super resolution, TypeEnvironment API, and review fixes

Add cross-language receiver keyword resolution:
- self/this/$this → enclosing class name via AST walk
- super/base/parent → parent class name via heritage AST extraction
  (8 grammar variants: TS/JS, Java, Python, Ruby, C#, PHP, Kotlin, C++, Swift)
- D-phase widening in resolveCallTarget for super→parent method dispatch

Introduce TypeEnvironment API replacing loose TypeEnvResult + lookupTypeEnv:
- buildTypeEnv() returns TypeEnvironment with .lookup() method
- Single-pass AST walk merges constructor binding scan (was separate traversal)
- ClassNameLookup type replaces over-broad ReadonlySet<string> facade
- Memoized class name lookups to avoid redundant SymbolTable scans

Code review fixes (6 agents, 11 findings):
- Replace ctx.resolve(name, '') hack with direct symbols.lookupFuzzy()
- Extract scope key helpers (extractFuncNameFromScope, receiverKey)
- Simplify D-phase from 5 steps to 4 with deduped typeNodeIds
- Remove C from CONSTRUCTOR_BINDING_SCANNERS (YAGNI — C has no constructors)
- Cache Map reuse in ResolutionContext to reduce GC pressure
- Remove unused TieredCandidates import

Integration tests for self/this, parent, and super resolution across all
12 supported languages with per-language fixture directories.

* fix(type-env): generic parent resolution, TS cast inference, C++ brace-init

Fix generic parent class breaking super resolution:
- extractParentClassFromNode now uses extractSimpleTypeName to strip
  generic params (Base<T> → Base) and qualified names (models.Model → Model)
- Affects TS, Java, Python, C# heritage extraction

Fix TypeScript new X() as T / new X()! missed inference:
- Unwrap as_expression and non_null_expression before checking for
  new_expression in extractInitializer

Fix C++ brace-init User{} missed inference:
- Handle compound_literal_expression with type_identifier child
  in extractInitializer

Clean up deprecated lookupTypeEnv:
- Remove standalone lookupTypeEnv export, migrate all callers to
  TypeEnvironment.lookup() method
- Update all 80+ test assertions to use the new API

Integration test fixtures added:
- typescript-cast-constructor-inference (new X() as T, new X()!)
- typescript/java/csharp/kotlin-generic-parent-resolution
- cpp-brace-init-inference (auto x = User{})

* fix(type-extractors): Go &User{}, TS double-cast, Swift .init inference

Fix Go pointer-to-struct literal not inferred:
- Unwrap unary_expression (address-of &) before composite_literal check
- user := &User{} now correctly infers type User

Fix TypeScript double-cast only unwrapping one level:
- Change if to while loop for nested as_expression/non_null_expression
- new User() as unknown as Admin now correctly infers type User

Fix Swift User.init(name:) explicit init call missed:
- Handle navigation_expression callee with .init suffix in extractInitializer

Integration test fixtures:
- go-pointer-constructor-inference (&User{}, &Repo{})
- typescript-double-cast-inference (as unknown as T)

* feat: Rust struct literal, Python qualified ctor, Go new(), Swift .init scanner

- Rust: handle struct_expression in extractInitializer (User { name: "alice" })
- Python: support attribute nodes in extractInitializer (models.User("alice"))
  and the cross-file scanner — extractSimpleTypeName handles qualified names
- Go: handle new(User) built-in in extractGoShortVarDeclaration
- Swift: extend CONSTRUCTOR_BINDING_SCANNERS to handle navigation_expression
  callee for User.init(name:) cross-file resolution

Unit tests: 87 → 96 (Rust struct literal, Go new(), Python qualified ctor,
Python scanner qualified, plus edge cases)
Integration tests: 4 new describe blocks with fixtures

* fix: Rust Self{} resolution, C++ scoped brace-init, PHP promotion params, Ruby constants

- Rust: resolve Self {} struct literal to enclosing impl type (was stored as "Self")
- C++: replace type_identifier guard with extractSimpleTypeName for compound_literal_expression,
  enabling ns::User{} scoped brace-init (closes previously deferred gap)
- PHP: add property_promotion_parameter to TYPED_PARAMETER_TYPES for PHP 8.0+
  constructor property promotion (__construct(private Foo $x))
- Ruby: extend extractRubyConstructorBinding to accept constant left-hand side
  (REPO = Repo.new)

Unit tests: 96 → 101 (+5: Rust Self{} ×2, C++ ns::User{} ×1, PHP promotion ×1,
Ruby constant ×1)
Integration tests: 4 new describe blocks with fixtures

* feat: Phase 1 type resolution gaps — walrus, PHP properties, nullable, Go make/assert

Phase 1 quick wins from the type resolution gap analysis:

1. Python walrus operator := (named_expression) — extractInitializer + scanner
2. PHP 7.4+ typed class properties — property_declaration in extractDeclaration
3. Nullable union unwrapping — User | null → User in extractSimpleTypeName
4. Go make() builtin — slice/map element type extraction
5. Go type assertions — iface.(User) type extraction

Also: PHP primitive_type handling in extractSimpleTypeName (string, int, etc.)

Unit tests: 101 → 114 (+13)
Integration tests: 8 new describe blocks with fixtures

* feat: Phase 2 type resolution gaps — C++ range-for, Rust if-let, C# pattern matching, Python class annotations

Phase 2 medium-effort improvements:

1. C++ range-for with explicit type — for (User& u : vec) binds u: User
2. Rust if-let/while-let captured_pattern — user @ User { .. } binds user: User
3. C# is-pattern matching — if (obj is User user) binds user: User
4. Python class-level annotations — confirmed already working, added tests

Unit tests: 114 → 127 (+13)
Integration tests: 11 new test cases with fixtures
2026-03-14 19:05:49 +00:00
Candido Sales Gomes
0999595444
feat(ruby): Add Ruby language support for CLI and web (#111) 2026-03-13 21:46:59 +00:00
Gergő Magyar
1afe9166aa
feat: language-aware code intelligence — symbol resolution, MRO, constructor discrimination (#238)
* feat: add Method Resolution Order (MRO) with language-specific rules

Implement full MRO computation for multi-language inheritance hierarchies:

- HAS_METHOD edges: Class→Method ownership edges emitted during parsing
  (both worker pool and sequential fallback paths)
- Method signatures: extract parameterCount and returnType from AST nodes
- C# heritage fix: distinguish EXTENDS vs IMPLEMENTS for base_list captures
  using symbol table lookup + I[A-Z] naming heuristic fallback
- MRO processor (Phase 4.5): walks inheritance DAG, detects method-name
  collisions across parents, applies language-specific resolution:
  - C++: leftmost base class in declaration order wins
  - C#/Java: class method wins over interface default
  - Python: C3 linearization with cycle detection
  - Rust: no auto-resolution (requires qualified syntax)
  - Default: first definition in BFS order wins
- OVERRIDES edges emitted for resolved method collisions
- KuzuDB schema: Method table extended with parameterCount/returnType;
  dedicated CSV writer and COPY query for 10-column Method rows
- MCP tools: updated Cypher examples for HAS_METHOD, OVERRIDES, diamond

72 tests across 5 test files covering MRO resolution, HAS_METHOD edges,
method signature extraction, C# heritage resolution, and integration
tests across C#/Rust/Python/TS/Java/C++.

* feat: add scope-based symbol resolution replacing raw lookupFuzzy

Introduces a shared 3-tier resolveSymbol function used by both
heritage-processor and call-processor:
1. Same-file (lookupExactFull — authoritative)
2. Import-scoped (filtered by ImportMap — high confidence)
3. Global fuzzy (first match — low confidence fallback)

Adds lookupExactFull to SymbolTable returning full SymbolDefinition
with type info needed for heritage Class/Interface disambiguation.

* refactor: tighten symbol resolution — Tier 3 refuses ambiguous matches

- lookupExactFull now O(1) via direct SymbolDefinition storage in fileIndex
  (shared object references with globalIndex — zero additional memory)
- Added resolveSymbolInternal() preserving { definition, tier, candidateCount }
  for test assertions and logging
- Tier 3 now returns null when multiple global candidates exist instead of
  arbitrary allDefs[0] — a wrong edge is worse than no edge
- call-processor: renamed fuzzy-global → unique-global, removed dead branch
- 12 new tests: tier assertions, ambiguous refusal per language family,
  heritage false-positive guard, O(1) shared reference verification

* fix: critical language support bugs in import resolution and MRO

Phase 5 critical fixes from all-language analysis:
- Python: add relative_import query capture (PEP 328) — `.models`, `..utils`
  were silently dropped, producing zero ImportMap entries
- Rust: extract prefix from grouped imports `crate::module::{A, B}` — brace
  groups previously failed resolution entirely
- Swift: use normalizedFileList for Windows path compatibility in module
  import resolution (matches Go's resolveGoPackage pattern)
- MRO: fix c_sharp → csharp language name mismatch (enum is 'csharp'),
  add Kotlin to C#/Java resolution rules (class method wins over interface)

* feat: add strict multi-language integration tests + fix C/C++ import resolution

Add 32 integration tests across 6 language fixtures (TypeScript, C#, C++,
Java, Python, Rust) with exact toBe/toEqual assertions validating heritage
edges, import resolution, and trait implementations.

Fix C/C++ import resolution bug where dot-to-slash conversion mangled
include paths (e.g. "animal.h" became "animal/h"). Now skips conversion
for C/C++ languages which use actual file paths in #include directives.

* fix: language-gate heritage heuristic, add Swift extension heritage, handle Rust grouped imports

- Gate I[A-Z] naming heuristic to C#/Java only (was firing for all languages)
- Swift unresolved types default to IMPLEMENTS (protocol conformance is the norm)
- Add tree-sitter query for Swift extension protocol conformance (extension Foo: Protocol)
- Handle Rust top-level grouped imports (use {crate::a, crate::b}) in both import loops
- Add 4 new heritage-processor tests (TypeScript refusal, Swift default, Swift Tier 1)

* feat: add Go struct embedding heritage + PackageMap optimization

Add Go struct embedding detection (anonymous fields → EXTENDS edges) via
new tree-sitter heritage query with named-field filtering in both
parse-worker and heritage-processor paths.

Implement PackageMap optimization for Go cross-package resolution:
replace O(N) file-level ImportMap expansion with directory-level suffix
matching (Tier 2b in symbol resolver). Graph IMPORTS edges are preserved
via addImportGraphEdge split.

Remove overly broad @definition.type from GO_QUERIES that was
double-matching structs/interfaces as TypeAlias nodes, breaking Tier 3
unique-global resolution.

Add Go fixture (go-pkg) with Admin→User embedding, cross-package calls,
and 7 integration tests covering structs, functions, imports, calls,
and heritage edges.

* test: add Kotlin heritage integration tests

Adds a kotlin-heritage fixture and 7 integration tests validating
class inheritance, interface implementation, JVM-style import
resolution, and symbol-table-driven EXTENDS/IMPLEMENTS disambiguation
via Kotlin delegation specifiers.

* feat: extract resolvers, add PHP tests, ambiguous tests for all languages

- Extract language-specific resolvers from import-processor.ts into
  resolvers/ directory (P7): jvm, go, csharp, php, rust, standard, utils
- import-processor.ts reduced from 1412 to 711 lines (50% reduction)
- Add comprehensive PHP integration tests: PSR-4 imports, traits, enums,
  heritage edges, method calls, MRO overrides
- Add ambiguous symbol resolution tests for all 9 languages verifying
  correct disambiguation via import chains
- Split monolithic lang-resolution.test.ts (1080 lines) into 9 per-language
  files under test/integration/resolvers/ with shared helpers

* feat: update integration tests to include resolver tests for multiple languages

* fix: address code review — schema gap, Rust impl name, Property OVERRIDES

Bugs fixed:
- Add 13 missing FROM/TO pairs in RELATION_SCHEMA for HAS_METHOD edges
  (Class/Interface/Struct/Trait/Impl/Record to Method/Constructor/Property)
- Fix findEnclosingClassId to pick implementing type for Rust
  impl Trait for Struct blocks (was picking trait name)
- Exclude Property nodes from MRO OVERRIDES collision detection
- Change MRO language fallback from typescript to unknown

Tests added:
- Unit: Property OVERRIDES exclusion (2 tests), Rust impl Trait for
  Struct name resolution (2 tests), schema HAS_METHOD pair coverage
- Integration: no OVERRIDES targets Property nodes across all 9 languages
- PHP fixture: added shared $status property to both traits to create
  real collision scenario for Property OVERRIDES exclusion test

Documentation:
- OVERRIDES edge direction (Class to Method), Go return type gap,
  BFS first-reach heuristic limitation

* feat: harden CALLS-edge resolution — Phase 0 validation

- Fix same-file confidence (0.85 → 0.95) to correctly outrank import-scoped (0.9)
- Fix Tier 1 overload preservation: use globalIndex filter instead of fileIndex lookup
- Add callable-kind guard: refuse CALLS edges to Interface and Enum symbols
- Fix Kotlin countCallArguments: handle call_suffix → value_arguments nesting
- Fix Kotlin extractFunctionName: add simple_identifier to fallback search
- Strictly type findParameterList and countCallArguments (remove all `any`)
- Add arity-based call resolution integration tests for 9 languages
- Add unit regression tests for Interface/Enum CALLS refusal

* chore: remove C# build artifacts from fixtures

* feat: add call-form discrimination and ownerId to symbol table (Phase 1)

Add inferCallForm() and extractReceiverName() to distinguish free/member/constructor
calls at the AST level across all 9 languages. Add ownerId field to SymbolDefinition
linking Method/Constructor/Property to their owning class. Includes 36 unit tests
and member-call integration tests for all 9 languages (132 tests, 0 failures).

* feat: constructor/struct-literal resolution across all languages (Phase 2)

Add constructor discrimination to CALLS-edge resolution: new Foo(),
User{...} struct literals, and C# primary constructors now resolve to
Constructor/Class/Struct/Record nodes instead of being filtered out.

Queries: new_expression (C++), object_creation_expression (PHP),
composite_literal (Go), struct_expression (Rust), primary constructor
and implicit_object_creation_expression (C#).

Relaxes global tier in collectTieredCandidates to pass all candidates
through filterCallableCandidates, allowing kind/arity narrowing to
disambiguate at lower confidence.

* feat: receiver-constrained resolution with integration tests for all 9 languages

Add receiver-type filtering (Phase 3): when a member call like `user.save()`
has a known receiver type from TypeEnv, filter candidates by ownerId to
disambiguate methods with the same name across different classes.

Key changes:
- call-processor: build per-file TypeEnv, pass receiverTypeName to resolveCallTarget
- parse-worker: extract receiverTypeName from TypeEnv in worker thread
- resolveCallTarget: new step D filters by ownerId matching receiver type
- utils: extractReceiverName supports C++ field_expression (argument field)
- utils: findEnclosingClassId extracts Go method receiver types
- type-env: handle Go qualified_type, Kotlin user_type/variable_declaration
- parse-worker + parsing-processor: Function added to needsOwner for
  Kotlin/Rust/Python class methods captured as Function nodes

Integration tests added for receiver-constrained resolution across all 9
languages: TypeScript, Java, Python, Go, Rust, C++, C#, Kotlin, PHP.

* feat: NamedImportMap, scoped TypeEnv, broadened signatures + TS rest-param variadic fix

Address all 4 PR #238 review items:
1. Remove redundant lookupFuzzy in processRoutesFromExtracted
2. Add NamedImportMap for TS/Python symbol-level import tracking (Tier 2a)
3. Make TypeEnv scope-aware (Map<scopeKey, Map<varName, type>>) to fix
   non-deterministic receiver resolution across functions
4. Broaden extractMethodSignature: Go/Rust/C++ return types, variadic
   detection for Go/Java/Python/C++/Kotlin/TypeScript rest params

Discovered and fixed: TS rest params (...args) were not detected as
variadic — added rest_pattern detection inside required_parameter nodes.

Integration tests added: scoped receiver, named import disambiguation,
and variadic call resolution for both TypeScript and Python.

* fix: alias import resolution, Go multi-assign TypeEnv, dead code removal

- NamedImportMap now stores {sourcePath, exportedName} so aliased imports
  (import { User as U }) resolve U → User in the source file
- Named binding check moved before empty-allDefs early return in both
  call-processor and symbol-resolver, fixing constructor calls via aliases
- Go extractFromGoShortVarDeclaration iterates all LHS/RHS pairs for
  multi-assignment (user, repo := User{}, Repo{}) instead of only first
- Remove unused TYPED_DECLARATION_TYPES set (TYPED_PARAMETER_TYPES kept)
- Integration tests for both fixes (go-multi-assign, typescript-alias-imports)

* feat: alias import extraction for Kotlin, Rust, PHP, C# + integration tests

Add named import alias extraction to both pipeline paths
(import-processor.ts and parse-worker.ts) for Kotlin, Rust, PHP,
and C#. Add integration test fixtures and tests for all 5 languages
(Python alias extraction already worked, just needed the test).

Each test verifies: class detection, member call resolution through
aliases to correct target files, and IMPORTS edge emission.

* refactor: use SupportedLanguages enum everywhere instead of raw strings

Replace all raw language string literals and `language: string` types
with the SupportedLanguages enum across 10 files. This ensures
compile-time safety for language dispatch and eliminates dead
`language === 'tsx'` checks (tsx maps to TypeScript in the enum).

* fix: tier-ordering bug, re-export chains, PHP grouped imports, Java named imports

- Fix collectTieredCandidates tier-ordering: same-file now checked before
  named bindings, preventing imports from shadowing local definitions
  (matches resolveSymbolInternal priority order)
- Add re-export chain resolution for TypeScript/JavaScript barrel files:
  export { X } from './base' and export type { X } from './base' now
  followed up to 5 hops through NamedImportMap
- Fix PHP grouped import alias extraction: use App\Models\{User, Repo as R}
  now correctly handled in both parse-worker and import-processor
- Add Java NamedImportMap support: import com.example.models.User now
  records User as a named binding for precise disambiguation
- Add 16 new integration tests across TypeScript, PHP, and Java resolvers
  (220 total resolver tests, all passing)

* refactor: consolidate alias extraction + add variadic/constructor/shadow integration tests

- Extract shared named-binding-extraction.ts from duplicate logic in
  import-processor.ts and parse-worker.ts (net -200 lines)
- Deduplicate appendKotlinWildcard (now imported from resolvers/index.ts)
- Add integration tests: constructor calls (Kotlin, Python), variadic
  resolution (Go, Java, C#, C++, Kotlin), re-export chains (Python),
  local definition shadowing (Python, Go)
- Add TODO(stack-graph) for TypeEnv scope key collision
- 225 integration tests passing (was 223)

* fix: PHP non-aliased imports, Python node identity, re-export chain dedup + local-shadow tests

- PHP flat non-aliased imports (use App\Models\User) now stored in NamedImportMap
- PHP grouped non-aliased imports ({User} in {User, Repo as R}) now stored in NamedImportMap
- Python: replace non-public child.id with child.startIndex for node identity
- Extract shared walkBindingChain() from symbol-resolver and call-processor
- Add PHP variadic resolution fixture + test (variadic_parameter already covers PHP)
- Add local-shadow integration tests for Java, C#, Kotlin, Rust, PHP, C++ (6 languages)

* feat: Rust non-aliased use bindings, Kotlin non-aliased imports, re-export chain resolution

Extend NamedImportMap coverage for Rust and Kotlin non-aliased imports:

- Rust: rename collectUseAsClauses → collectRustBindings, extract terminal
  scoped_identifier (use crate::models::User) and identifier in use_list
  (use crate::models::{User, Repo}) into NamedImportMap. This also enables
  pub use re-export chain following via walkBindingChain.
- Kotlin: extend extractKotlinNamedBindings to handle non-aliased imports
  (import com.example.User), skipping wildcard imports.
- Add rust-reexport-chain fixture + 3 integration tests verifying Handler{}
  resolves through mod.rs pub use to handler.rs.
- Add Kotlin heritage + constructor-calls reason assertions for non-aliased
  import-resolved resolution.
- Add C# heritage test documenting namespace import tier behavior.

* fix: skip Kotlin lowercase member imports in NamedImportMap

Member imports like `import util.OneArg.writeAudit` (lowercase last
segment) must not populate NamedImportMap — same-named function imports
from different classes collide, breaking arity-based disambiguation.
Apply the same guard Java already uses: skip lowercase last segments.

* fix: skip spurious path-prefix bindings in Rust grouped imports

collectRustBindings was extracting the path segment (e.g. "models") from
`use crate::models::{User, Repo}` as a spurious NamedImportMap entry.
Skip scoped_identifier nodes that are direct children of scoped_use_list
since they are path prefixes, not importable symbols.

Adds rust-grouped-imports fixture and 4 integration tests verifying both
symbols resolve correctly and no spurious binding leaks through.

* fix: use startIndex in TypeEnv scope key to prevent same-name method collision

Two methods named identically in different classes within the same file
previously shared a scope key, causing non-deterministic type resolution.
Now keys use funcName@startIndex for uniqueness.

Also adds tests documenting destructuring assignment extraction gap.

* test: document C# namespace-level import limitation in named binding extraction

* test: document same-arity overload discrimination limitation in call processor

* perf: parallelize calls/heritage/routes processing in worker path

Worker path now runs processCallsFromExtracted, processHeritageFromExtracted,
and processRoutesFromExtracted via Promise.all instead of sequentially.
Safe because all three only read shared state and write via addRelationship's
dedup guard. Sequential fallback path stays sequential (shared LRU astCache).

Also fixes Rust collectRustBindings spurious path-prefix bindings for 3+ level
grouped imports, and adds @param JSDoc for walkBindingChain's allDefs invariant.

* docs: improve Promise.all safety comment and walkBindingChain JSDoc

Clarify that the parallelization safety comes from disjoint relationship
types + idempotent id-keyed Maps, not from lack of shared state (the
graph is shared). Strengthen allDefs JSDoc to describe silent-miss
consequence of passing pre-filtered results.

* refactor: extract language-specific processing into modular dispatch tables

Phase 1: Extract type binding logic from type-env.ts (635→125 LOC) into
type-extractors/ directory with per-language files and Record<SupportedLanguages,
LanguageTypeConfig> + satisfies dispatch.

Phase 2: Extract 5 config loaders from import-processor.ts into
language-config.ts (removed ~196 LOC of inline loaders).

Phase 3: Convert export-detection.ts switch/case to exhaustive
Record<SupportedLanguages, ExportChecker> + satisfies dispatch table,
fix node: any → SyntaxNode.

Also adds language feature matrix to README.

All 1146 unit tests and 433 integration tests pass.

* refactor: extract type binding logic into type-extractors/ directory (Phase 1)

Extract per-language type extraction from type-env.ts (635→125 LOC) into
type-extractors/ with Record<SupportedLanguages, LanguageTypeConfig> + satisfies
dispatch. 9 per-language files, shared helpers, and barrel index.

* refactor: extract config loaders to language-config.ts (Phase 2)

Move 5 language-specific config loaders and their type interfaces from
import-processor.ts into standalone language-config.ts module.
2026-03-13 13:12:23 +00:00
Ryanba
1be910f54a
fix: skip unavailable native Swift parsers in sequential ingestion (#188)
* fix: skip unavailable native Swift parsers in sequential ingestion

* fix: warn when ingestion skips languages in verbose mode

* test: cover verbose skip warnings

* docs: update analyze flags

* docs: clarify verbose default

---------

Co-authored-by: Gergo Magyar <gergomagyar@icloud.com>
2026-03-10 14:26:36 +00:00
jandyx
1ed34a0007 docs: update supported languages list to include PHP and Swift 2026-02-27 11:45:05 +08:00
Dmytro
984316d260 feat: add Codex MCP and skills support 2026-02-25 15:43:12 +01:00
abhigyanpatwari
91289404c2 feat(gitnexus): v1.2.9 — impact enrichment, cypher markdown, Windows setup fix
- Impact tool now returns risk score, affected processes/modules, and summary
- Cypher tool formats results as markdown tables for LLM readability
- Context tool includes module (functional area) field
- Semantic search skips model init when embeddings are disabled
- Setup: wrap npx in cmd /c on Windows for .cmd script compatibility
- Embedder: silence stderr during ONNX model load to protect MCP stdio
- API: use executeCypher directly to avoid double formatting
- Add community integrations section to READMEs

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
2026-02-25 17:10:51 +05:30
Paul Robello
8dd1c19bec feat(web): wire agent/chat through HTTP in backend mode
Add HTTP wrapper functions (executeQuery, textSearch) to the ingestion
worker and a new initializeBackendAgent method that creates the agent
with HTTP-backed tool closures instead of local KuzuDB. useAppState
detects backend mode and routes agent initialization accordingly.
2026-02-22 17:14:18 -08:00
Paul Robello
76d1538c5e docs: update READMEs for local backend mode 2026-02-22 17:14:18 -08:00
abhigyanpatwari
8e2ee26834 docs: remove architecture docs and deep implementation details from markdown files 2026-02-21 13:00:09 +05:30
abhigyanpatwari
6ce715b62c repowiki CLI command implemented 2026-02-17 02:25:07 +05:30
abhigyanpatwari
dda8de41a3 MCP and cli fixes 2026-02-07 06:21:21 +05:30
abhigyanpatwari
2a205af78b moved Readme to root 2026-01-17 23:11:25 +05:30
abhigyanpatwari
e153d30c8f MCP bridge added 2026-01-17 23:08:48 +05:30
Renamed from README.md (Browse further)