diff --git a/gitnexus/src/cli/analyze.ts b/gitnexus/src/cli/analyze.ts
index d46f0fcea..312693190 100644
--- a/gitnexus/src/cli/analyze.ts
+++ b/gitnexus/src/cli/analyze.ts
@@ -119,7 +119,7 @@ export const analyzeCommand = async (
   console.log(`  Storage: ${storagePath}`);
   console.log(`  Stats: ${stats.nodes} nodes, ${stats.edges} edges`);
   
-  if (aiContext.pointerFiles.length > 0) {
-    console.log(`  AI Context: ${aiContext.pointerFiles.join(', ')}`);
+  if (aiContext.files.length > 0) {
+    console.log(`  AI Context: ${aiContext.files.join(', ')}`);
   }
 };
diff --git a/gitnexus/src/cli/index.ts b/gitnexus/src/cli/index.ts
index 149e0f1b7..8e354ba50 100644
--- a/gitnexus/src/cli/index.ts
+++ b/gitnexus/src/cli/index.ts
@@ -43,9 +43,8 @@ program
   .action(statusCommand);
 
 program
-  .command('clean [target]')
-  .description('Delete indexed repository(ies)')
-  .option('-a, --all', 'Delete all indexed repositories')
+  .command('clean')
+  .description('Delete GitNexus index for current repo')
   .option('-f, --force', 'Skip confirmation prompt')
   .action(cleanCommand);
 
diff --git a/gitnexus/src/core/ingestion/import-processor.ts b/gitnexus/src/core/ingestion/import-processor.ts
index aeac2162f..1977ca290 100644
--- a/gitnexus/src/core/ingestion/import-processor.ts
+++ b/gitnexus/src/core/ingestion/import-processor.ts
@@ -163,15 +163,17 @@ export const processImports = async (
       
       // Removed verbose Java import logging
     } catch (queryError: any) {
-      // Detailed debug logging for query failures
-      console.group(`🔴 Query Error: ${file.path}`);
-      console.log('Language:', language);
-      console.log('Query (first 200 chars):', queryStr.substring(0, 200) + '...');
-      console.log('Error:', queryError?.message || queryError);
-      console.log('File content (first 300 chars):', file.content.substring(0, 300));
-      console.log('AST root type:', tree.rootNode?.type);
-      console.log('AST has errors:', tree.rootNode?.hasError);
-      console.groupEnd();
+      // Only log query errors in development mode
+      if (isDev) {
+        console.group(`🔴 Query Error: ${file.path}`);
+        console.log('Language:', language);
+        console.log('Query (first 200 chars):', queryStr.substring(0, 200) + '...');
+        console.log('Error:', queryError?.message || queryError);
+        console.log('File content (first 300 chars):', file.content.substring(0, 300));
+        console.log('AST root type:', tree.rootNode?.type);
+        console.log('AST has errors:', tree.rootNode?.hasError);
+        console.groupEnd();
+      }
       
       if (wasReparsed) (tree as any).delete?.();
       continue;