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}, - "files": [ - "dist" - ], - "scripts": { - "build": "tsc", - "dev": "tsx watch src/cli/index.ts" - }, - "dependencies": { - "@huggingface/transformers": "^3.0.0", - "@modelcontextprotocol/sdk": "^1.0.0", - "commander": "^12.0.0", - "cors": "^2.8.5", - "express": "^4.19.2", - "glob": "^11.0.0", - "graphology": "^0.25.4", - "graphology-communities-louvain": "^2.0.1", - "kuzu": "^0.11.3", - "lru-cache": "^11.0.0", - "minisearch": "^7.2.0", - "ora": "^8.0.0", - "tree-sitter": "^0.21.0", - "tree-sitter-c": "^0.21.0", - "tree-sitter-c-sharp": "^0.21.0", - "tree-sitter-cpp": "^0.22.0", - "tree-sitter-go": "^0.21.0", - "tree-sitter-java": "^0.20.0", - "tree-sitter-javascript": "^0.21.0", - "tree-sitter-python": "^0.21.0", - "tree-sitter-rust": "^0.21.0", - "tree-sitter-typescript": "^0.21.0", - "uuid": "^13.0.0" - }, - "devDependencies": { - "@types/cors": "^2.8.17", - "@types/express": "^4.17.21", - "@types/node": "^20.0.0", - "@types/uuid": "^10.0.0", - "tsx": "^4.0.0", - "typescript": "^5.4.5" - }, - "engines": { - "node": ">=18.0.0" - } -} diff --git a/gitnexus-cli/src/cli/mcp.ts b/gitnexus-cli/src/cli/mcp.ts deleted file mode 100644 index 4e5acdbf9..000000000 --- a/gitnexus-cli/src/cli/mcp.ts +++ /dev/null @@ -1,8 +0,0 @@ -import { startMCPServer } from '../mcp/server.js'; - -export const mcpCommand = async () => { - await startMCPServer(); -}; - - - diff --git a/gitnexus-cli/src/core/embeddings/index.ts b/gitnexus-cli/src/core/embeddings/index.ts deleted file mode 100644 index 4b4f10bb5..000000000 --- a/gitnexus-cli/src/core/embeddings/index.ts +++ /dev/null @@ -1,11 +0,0 @@ -/** - * Embeddings Module - * - * Re-exports for the embedding pipeline system. - */ - -export * from './types.js'; -export * from './embedder.js'; -export * from './text-generator.js'; -export * from './embedding-pipeline.js'; - diff --git a/gitnexus-cli/src/core/ingestion/pipeline.ts b/gitnexus-cli/src/core/ingestion/pipeline.ts deleted file mode 100644 index 45b087db7..000000000 --- a/gitnexus-cli/src/core/ingestion/pipeline.ts +++ /dev/null @@ -1,267 +0,0 @@ -import { createKnowledgeGraph } from '../graph/graph.js'; -import { processStructure } from './structure-processor.js'; -import { processParsing } from './parsing-processor.js'; -import { processImports, createImportMap } from './import-processor.js'; -import { processCalls } from './call-processor.js'; -import { processHeritage } from './heritage-processor.js'; -import { processCommunities } from './community-processor.js'; -import { processProcesses } from './process-processor.js'; -import { createSymbolTable } from './symbol-table.js'; -import { createASTCache } from './ast-cache.js'; -import { PipelineProgress, PipelineResult } from '../../types/pipeline.js'; -import { walkRepository } from './filesystem-walker.js'; - -const isDev = process.env.NODE_ENV !== 'production'; - -export const runPipelineFromRepo = async ( - repoPath: string, - onProgress: (progress: PipelineProgress) => void -): Promise => { - const graph = createKnowledgeGraph(); - const fileContents = new Map(); - const symbolTable = createSymbolTable(); - const astCache = createASTCache(50); - const importMap = createImportMap(); - - const cleanup = () => { - astCache.clear(); - symbolTable.clear(); - }; - - try { - onProgress({ - phase: 'extracting', - percent: 0, - message: 'Scanning repository...', - }); - - const files = await walkRepository(repoPath, (current, total, filePath) => { - const scanProgress = Math.round((current / total) * 15); - onProgress({ - phase: 'extracting', - percent: scanProgress, - message: 'Scanning repository...', - detail: filePath, - stats: { filesProcessed: current, totalFiles: total, nodesCreated: graph.nodeCount }, - }); - }); - - files.forEach(f => fileContents.set(f.path, f.content)); - - onProgress({ - phase: 'extracting', - percent: 15, - message: 'Repository scanned successfully', - stats: { filesProcessed: files.length, totalFiles: files.length, nodesCreated: graph.nodeCount }, - }); - - onProgress({ - phase: 'structure', - percent: 15, - message: 'Analyzing project structure...', - stats: { filesProcessed: 0, totalFiles: files.length, nodesCreated: graph.nodeCount }, - }); - - const filePaths = files.map(f => f.path); - processStructure(graph, filePaths); - - onProgress({ - phase: 'structure', - percent: 30, - message: 'Project structure analyzed', - stats: { filesProcessed: files.length, totalFiles: files.length, nodesCreated: graph.nodeCount }, - }); - - onProgress({ - phase: 'parsing', - percent: 30, - message: 'Parsing code definitions...', - stats: { filesProcessed: 0, totalFiles: files.length, nodesCreated: graph.nodeCount }, - }); - - await processParsing(graph, files, symbolTable, astCache, (current, total, filePath) => { - const parsingProgress = 30 + ((current / total) * 40); - onProgress({ - phase: 'parsing', - percent: Math.round(parsingProgress), - message: 'Parsing code definitions...', - detail: filePath, - stats: { filesProcessed: current, totalFiles: total, nodesCreated: graph.nodeCount }, - }); - }); - - onProgress({ - phase: 'imports', - percent: 70, - message: 'Resolving imports...', - stats: { filesProcessed: 0, totalFiles: files.length, nodesCreated: graph.nodeCount }, - }); - - await processImports(graph, files, astCache, importMap, (current, total) => { - const importProgress = 70 + ((current / total) * 12); - onProgress({ - phase: 'imports', - percent: Math.round(importProgress), - message: 'Resolving imports...', - stats: { filesProcessed: current, totalFiles: total, nodesCreated: graph.nodeCount }, - }); - }); - - if (isDev) { - const importsCount = graph.relationships.filter(r => r.type === 'IMPORTS').length; - console.log(`๐Ÿ“Š Pipeline: After import phase, graph has ${importsCount} IMPORTS relationships (total: ${graph.relationshipCount})`); - } - - onProgress({ - phase: 'calls', - percent: 82, - message: 'Tracing function calls...', - stats: { filesProcessed: 0, totalFiles: files.length, nodesCreated: graph.nodeCount }, - }); - - await processCalls(graph, files, astCache, symbolTable, importMap, (current, total) => { - const callProgress = 82 + ((current / total) * 10); - onProgress({ - phase: 'calls', - percent: Math.round(callProgress), - message: 'Tracing function calls...', - stats: { filesProcessed: current, totalFiles: total, nodesCreated: graph.nodeCount }, - }); - }); - - onProgress({ - phase: 'heritage', - percent: 92, - message: 'Extracting class inheritance...', - stats: { filesProcessed: 0, totalFiles: files.length, nodesCreated: graph.nodeCount }, - }); - - await processHeritage(graph, files, astCache, symbolTable, (current, total) => { - const heritageProgress = 88 + ((current / total) * 4); - onProgress({ - phase: 'heritage', - percent: Math.round(heritageProgress), - message: 'Extracting class inheritance...', - stats: { filesProcessed: current, totalFiles: total, nodesCreated: graph.nodeCount }, - }); - }); - - onProgress({ - phase: 'communities', - percent: 92, - message: 'Detecting code communities...', - stats: { filesProcessed: files.length, totalFiles: files.length, nodesCreated: graph.nodeCount }, - }); - - const communityResult = await processCommunities(graph, (message, progress) => { - const communityProgress = 92 + (progress * 0.06); - onProgress({ - phase: 'communities', - percent: Math.round(communityProgress), - message, - stats: { filesProcessed: files.length, totalFiles: files.length, nodesCreated: graph.nodeCount }, - }); - }); - - if (isDev) { - console.log(`๐Ÿ˜๏ธ Community detection: ${communityResult.stats.totalCommunities} communities found (modularity: ${communityResult.stats.modularity.toFixed(3)})`); - } - - communityResult.communities.forEach(comm => { - graph.addNode({ - id: comm.id, - label: 'Community' as const, - properties: { - name: comm.label, - filePath: '', - heuristicLabel: comm.heuristicLabel, - cohesion: comm.cohesion, - symbolCount: comm.symbolCount, - } - }); - }); - - communityResult.memberships.forEach(membership => { - graph.addRelationship({ - id: `${membership.nodeId}_member_of_${membership.communityId}`, - type: 'MEMBER_OF', - sourceId: membership.nodeId, - targetId: membership.communityId, - confidence: 1.0, - reason: 'leiden-algorithm', - }); - }); - - onProgress({ - phase: 'processes', - percent: 98, - message: 'Detecting execution flows...', - stats: { filesProcessed: files.length, totalFiles: files.length, nodesCreated: graph.nodeCount }, - }); - - const processResult = await processProcesses( - graph, - communityResult.memberships, - (message, progress) => { - const processProgress = 98 + (progress * 0.01); - onProgress({ - phase: 'processes', - percent: Math.round(processProgress), - message, - stats: { filesProcessed: files.length, totalFiles: files.length, nodesCreated: graph.nodeCount }, - }); - } - ); - - if (isDev) { - console.log(`๐Ÿ”„ Process detection: ${processResult.stats.totalProcesses} processes found (${processResult.stats.crossCommunityCount} cross-community)`); - } - - processResult.processes.forEach(proc => { - graph.addNode({ - id: proc.id, - label: 'Process' as const, - properties: { - name: proc.label, - filePath: '', - heuristicLabel: proc.heuristicLabel, - processType: proc.processType, - stepCount: proc.stepCount, - communities: proc.communities, - entryPointId: proc.entryPointId, - terminalId: proc.terminalId, - } - }); - }); - - processResult.steps.forEach(step => { - graph.addRelationship({ - id: `${step.nodeId}_step_${step.step}_${step.processId}`, - type: 'STEP_IN_PROCESS', - sourceId: step.nodeId, - targetId: step.processId, - confidence: 1.0, - reason: 'trace-detection', - step: step.step, - }); - }); - - onProgress({ - phase: 'complete', - percent: 100, - message: `Graph complete! ${communityResult.stats.totalCommunities} communities, ${processResult.stats.totalProcesses} processes detected.`, - stats: { - filesProcessed: files.length, - totalFiles: files.length, - nodesCreated: graph.nodeCount - }, - }); - - astCache.clear(); - - return { graph, fileContents, communityResult, processResult }; - } catch (error) { - cleanup(); - throw error; - } -}; diff --git a/gitnexus-cli/src/core/kuzu/kuzu-adapter.ts b/gitnexus-cli/src/core/kuzu/kuzu-adapter.ts deleted file mode 100644 index e42a6fb7c..000000000 --- a/gitnexus-cli/src/core/kuzu/kuzu-adapter.ts +++ /dev/null @@ -1,243 +0,0 @@ -import fs from 'fs/promises'; -import path from 'path'; -import kuzu from 'kuzu'; -import { KnowledgeGraph } from '../graph/types.js'; -import { - NODE_TABLES, - REL_TABLE_NAME, - SCHEMA_QUERIES, - EMBEDDING_TABLE_NAME, - NodeTableName, -} from './schema.js'; -import { generateAllCSVs } from './csv-generator.js'; - -let db: kuzu.Database | null = null; -let conn: kuzu.Connection | null = null; - -const normalizeCopyPath = (filePath: string): string => filePath.replace(/\\/g, '/'); - -export const initKuzu = async (dbPath: string) => { - if (conn) return { db, conn }; - - // kuzu v0.11 expects the database path to NOT exist (it will create it) - // or to be an existing valid kuzu database - // If an empty directory exists from a previous clean, remove it - try { - const stat = await fs.stat(dbPath); - if (stat.isDirectory()) { - // Check if it's an empty directory - const files = await fs.readdir(dbPath); - if (files.length === 0) { - // Empty directory - remove it so kuzu can create fresh - await fs.rmdir(dbPath); - } - } - } catch { - // Path doesn't exist, which is what kuzu v0.11 wants for a new database - } - - // Ensure parent directory exists - const parentDir = path.dirname(dbPath); - await fs.mkdir(parentDir, { recursive: true }); - - db = new kuzu.Database(dbPath); - conn = new kuzu.Connection(db); - - for (const schemaQuery of SCHEMA_QUERIES) { - try { - await conn.query(schemaQuery); - } catch { - // Schema may already exist - } - } - - return { db, conn }; -}; - -export const loadGraphToKuzu = async ( - graph: KnowledgeGraph, - fileContents: Map, - storagePath: string -) => { - if (!conn) { - throw new Error('KuzuDB not initialized. Call initKuzu first.'); - } - - const csvData = generateAllCSVs(graph, fileContents); - const csvDir = path.join(storagePath, 'csv'); - await fs.mkdir(csvDir, { recursive: true }); - - const nodeFiles: Array<{ table: NodeTableName; path: string }> = []; - for (const [tableName, csv] of csvData.nodes.entries()) { - if (csv.split('\n').length <= 1) continue; - const filePath = path.join(csvDir, `${tableName.toLowerCase()}.csv`); - await fs.writeFile(filePath, csv, 'utf-8'); - nodeFiles.push({ table: tableName, path: filePath }); - } - - const relLines = csvData.relCSV.split('\n').slice(1).filter(line => line.trim()); - - for (const { table, path: filePath } of nodeFiles) { - const copyQuery = getCopyQuery(table, normalizeCopyPath(filePath)); - await conn.query(copyQuery); - } - - let insertedRels = 0; - let skippedRels = 0; - for (const line of relLines) { - try { - const match = line.match(/"([^"]*)","([^"]*)","([^"]*)",([0-9.]+),"([^"]*)",([0-9-]+)/); - if (!match) continue; - const [, fromId, toId, relType, confidenceStr, reason, stepStr] = match; - const confidence = parseFloat(confidenceStr) || 1.0; - const step = parseInt(stepStr) || 0; - - const getNodeLabel = (nodeId: string): string => { - if (nodeId.startsWith('comm_')) return 'Community'; - if (nodeId.startsWith('proc_')) return 'Process'; - return nodeId.split(':')[0]; - }; - - const RESERVED_LABELS = ['Macro', 'Enum', 'Union', 'Const', 'Module', 'Struct']; - const escapeLabel = (label: string): string => { - return RESERVED_LABELS.includes(label) ? `\`${label}\`` : label; - }; - - const fromLabel = escapeLabel(getNodeLabel(fromId)); - const toLabel = escapeLabel(getNodeLabel(toId)); - - const insertQuery = ` - MATCH (a:${fromLabel} {id: '${fromId.replace(/'/g, "''")}' }), - (b:${toLabel} {id: '${toId.replace(/'/g, "''")}' }) - CREATE (a)-[:${REL_TABLE_NAME} {type: '${relType}', confidence: ${confidence}, reason: '${reason.replace(/'/g, "''")}', step: ${step}}]->(b) - `; - await conn.query(insertQuery); - insertedRels++; - } catch { - skippedRels++; - } - } - - // Cleanup CSVs - for (const { path: filePath } of nodeFiles) { - try { - await fs.unlink(filePath); - } catch { - // ignore - } - } - - return { success: true, insertedRels, skippedRels }; -}; - -const getCopyQuery = (table: NodeTableName, filePath: string): string => { - if (table === 'File') { - return `COPY File(id, name, filePath, content) FROM "${filePath}" (HEADER=true, PARALLEL=false)`; - } - if (table === 'Folder') { - return `COPY Folder(id, name, filePath) FROM "${filePath}" (HEADER=true, PARALLEL=false)`; - } - if (table === 'Community') { - return `COPY Community(id, label, heuristicLabel, keywords, description, enrichedBy, cohesion, symbolCount) FROM "${filePath}" (HEADER=true, PARALLEL=false)`; - } - if (table === 'Process') { - return `COPY Process(id, label, heuristicLabel, processType, stepCount, communities, entryPointId, terminalId) FROM "${filePath}" (HEADER=true, PARALLEL=false)`; - } - return `COPY ${table}(id, name, filePath, startLine, endLine, content) FROM "${filePath}" (HEADER=true, PARALLEL=false)`; -}; - -export const executeQuery = async (cypher: string): Promise => { - if (!conn) { - throw new Error('KuzuDB not initialized. Call initKuzu first.'); - } - - const queryResult = await conn.query(cypher); - // kuzu v0.11 uses getAll() instead of hasNext()/getNext() - // Query returns QueryResult for single queries, QueryResult[] for multi-statement - const result = Array.isArray(queryResult) ? queryResult[0] : queryResult; - const rows = await result.getAll(); - return rows; -}; - -export const executeWithReusedStatement = async ( - cypher: string, - paramsList: Array> -): Promise => { - if (!conn) { - throw new Error('KuzuDB not initialized. Call initKuzu first.'); - } - if (paramsList.length === 0) return; - - const SUB_BATCH_SIZE = 4; - for (let i = 0; i < paramsList.length; i += SUB_BATCH_SIZE) { - const subBatch = paramsList.slice(i, i + SUB_BATCH_SIZE); - const stmt = await conn.prepare(cypher); - if (!stmt.isSuccess()) { - const errMsg = await stmt.getErrorMessage(); - throw new Error(`Prepare failed: ${errMsg}`); - } - try { - for (const params of subBatch) { - await conn.execute(stmt, params); - } - } catch (e) { - // Log the error and continue with next batch - console.warn('Batch execution error:', e); - } - // Note: kuzu 0.8.2 PreparedStatement doesn't require explicit close() - } -}; - -export const getKuzuStats = async (): Promise<{ nodes: number; edges: number }> => { - if (!conn) return { nodes: 0, edges: 0 }; - - let totalNodes = 0; - for (const tableName of NODE_TABLES) { - try { - const queryResult = await conn.query(`MATCH (n:${tableName}) RETURN count(n) AS cnt`); - const nodeResult = Array.isArray(queryResult) ? queryResult[0] : queryResult; - const nodeRows = await nodeResult.getAll(); - if (nodeRows.length > 0) { - totalNodes += Number(nodeRows[0]?.cnt ?? nodeRows[0]?.[0] ?? 0); - } - } catch { - // ignore - } - } - - let totalEdges = 0; - try { - const queryResult = await conn.query(`MATCH ()-[r:${REL_TABLE_NAME}]->() RETURN count(r) AS cnt`); - const edgeResult = Array.isArray(queryResult) ? queryResult[0] : queryResult; - const edgeRows = await edgeResult.getAll(); - if (edgeRows.length > 0) { - totalEdges = Number(edgeRows[0]?.cnt ?? edgeRows[0]?.[0] ?? 0); - } - } catch { - // ignore - } - - return { nodes: totalNodes, edges: totalEdges }; -}; - -export const closeKuzu = async (): Promise => { - if (conn) { - try { - await conn.close(); - } catch {} - conn = null; - } - if (db) { - try { - await db.close(); - } catch {} - db = null; - } -}; - -export const isKuzuReady = (): boolean => conn !== null && db !== null; - -export const getEmbeddingTableName = (): string => EMBEDDING_TABLE_NAME; - - - diff --git a/gitnexus-cli/src/core/tree-sitter/parser-loader.ts b/gitnexus-cli/src/core/tree-sitter/parser-loader.ts deleted file mode 100644 index cdca3003d..000000000 --- a/gitnexus-cli/src/core/tree-sitter/parser-loader.ts +++ /dev/null @@ -1,45 +0,0 @@ -import Parser from 'tree-sitter'; -import JavaScript from 'tree-sitter-javascript'; -import TypeScript from 'tree-sitter-typescript'; -import Python from 'tree-sitter-python'; -import Java from 'tree-sitter-java'; -import C from 'tree-sitter-c'; -import CPP from 'tree-sitter-cpp'; -import CSharp from 'tree-sitter-c-sharp'; -import Go from 'tree-sitter-go'; -import Rust from 'tree-sitter-rust'; -import { SupportedLanguages } from '../../config/supported-languages.js'; - -let parser: Parser | null = null; - -const languageMap: Record = { - [SupportedLanguages.JavaScript]: JavaScript, - [SupportedLanguages.TypeScript]: TypeScript.typescript, - [`${SupportedLanguages.TypeScript}:tsx`]: TypeScript.tsx, - [SupportedLanguages.Python]: Python, - [SupportedLanguages.Java]: Java, - [SupportedLanguages.C]: C, - [SupportedLanguages.CPlusPlus]: CPP, - [SupportedLanguages.CSharp]: CSharp, - [SupportedLanguages.Go]: Go, - [SupportedLanguages.Rust]: Rust, -}; - -export const loadParser = async (): Promise => { - if (parser) return parser; - parser = new Parser(); - return parser; -}; - -export const loadLanguage = async (language: SupportedLanguages, filePath?: string): Promise => { - if (!parser) await loadParser(); - const key = language === SupportedLanguages.TypeScript && filePath?.endsWith('.tsx') - ? `${language}:tsx` - : language; - - const lang = languageMap[key]; - if (!lang) { - throw new Error(`Unsupported language: ${language}`); - } - parser!.setLanguage(lang); -}; diff --git a/gitnexus-cli/src/mcp/server.ts b/gitnexus-cli/src/mcp/server.ts deleted file mode 100644 index 9c59776ba..000000000 --- a/gitnexus-cli/src/mcp/server.ts +++ /dev/null @@ -1,175 +0,0 @@ -/** - * CLI MCP Server - * - * Standalone MCP server that uses local .gitnexus/ index. - */ - -import path from 'path'; -import fs from 'fs/promises'; -import { Server } from '@modelcontextprotocol/sdk/server/index.js'; -import { StdioServerTransport } from '@modelcontextprotocol/sdk/server/stdio.js'; -import { - CallToolRequestSchema, - ListToolsRequestSchema, - ListResourcesRequestSchema, - ReadResourceRequestSchema, -} from '@modelcontextprotocol/sdk/types.js'; -import { GITNEXUS_TOOLS } from './tools.js'; -import { findRepo } from '../storage/repo-manager.js'; -import { initKuzu, executeQuery } from '../core/kuzu/kuzu-adapter.js'; -import { loadBM25Index, isBM25Ready, searchBM25 } from '../core/search/bm25-index.js'; -import { hybridSearch } from '../core/search/hybrid-search.js'; -import { semanticSearch } from '../core/embeddings/embedding-pipeline.js'; -import { isEmbedderReady } from '../core/embeddings/embedder.js'; - -const notIndexedMessage = (cwd: string) => ` -Repository not indexed. - -Run: - cd ${cwd} - gitnexus analyze -`; - -const formatContext = (meta: { repoPath: string; indexedAt: string; lastCommit: string; stats?: any }) => { - const stats = meta.stats || {}; - return [ - `# GitNexus: ${meta.repoPath}`, - '', - '## Stats', - `- Files: ${stats.files ?? 0}`, - `- Nodes: ${stats.nodes ?? 0}`, - `- Edges: ${stats.edges ?? 0}`, - `- Communities: ${stats.communities ?? 0}`, - `- Processes: ${stats.processes ?? 0}`, - '', - `Indexed at: ${meta.indexedAt}`, - `Last commit: ${meta.lastCommit}`, - '', - '## Available Tools', - '- search, cypher, read, overview', - ].join('\n'); -}; - -export const startMCPServer = async () => { - const server = new Server( - { name: 'gitnexus', version: '0.1.0' }, - { capabilities: { tools: {}, resources: {} } } - ); - - server.setRequestHandler(ListResourcesRequestSchema, async () => { - const repo = await findRepo(process.cwd()); - if (!repo) return { resources: [] }; - return { - resources: [ - { - uri: 'gitnexus://context', - name: `GitNexus: ${repo.meta.repoPath}`, - description: 'Indexed repository context', - mimeType: 'text/markdown', - }, - ], - }; - }); - - server.setRequestHandler(ReadResourceRequestSchema, async (request) => { - if (request.params.uri !== 'gitnexus://context') { - throw new Error(`Unknown resource: ${request.params.uri}`); - } - const repo = await findRepo(process.cwd()); - if (!repo) { - return { - contents: [ - { - uri: 'gitnexus://context', - mimeType: 'text/plain', - text: notIndexedMessage(process.cwd()), - }, - ], - }; - } - return { - contents: [ - { - uri: 'gitnexus://context', - mimeType: 'text/markdown', - text: formatContext(repo.meta), - }, - ], - }; - }); - - server.setRequestHandler(ListToolsRequestSchema, async () => ({ - tools: GITNEXUS_TOOLS.map((tool) => ({ - name: tool.name, - description: tool.description, - inputSchema: tool.inputSchema, - })), - })); - - server.setRequestHandler(CallToolRequestSchema, async (request) => { - const repo = await findRepo(process.cwd()); - if (!repo) { - return { - content: [{ type: 'text', text: notIndexedMessage(process.cwd()) }], - isError: true, - }; - } - - await initKuzu(repo.kuzuPath); - await loadBM25Index(repo.bm25Path); - - const name = request.params.name; - const args = request.params.arguments || {}; - - if (name === 'search') { - const query = String(args.query || ''); - const limit = Number(args.limit ?? 10); - let results: any[] = []; - if (isBM25Ready() && isEmbedderReady()) { - results = await hybridSearch(query, limit, executeQuery, semanticSearch); - } else if (isBM25Ready()) { - results = searchBM25(query, limit); - } else if (isEmbedderReady()) { - results = await semanticSearch(executeQuery, query, limit); - } - return { - content: [{ type: 'text', text: JSON.stringify(results, null, 2) }], - }; - } - - if (name === 'cypher') { - const query = String(args.query || ''); - const result = await executeQuery(query); - return { - content: [{ type: 'text', text: JSON.stringify(result, null, 2) }], - }; - } - - if (name === 'read') { - const filePath = args.path; - if (!filePath) { - return { - content: [{ type: 'text', text: 'Missing path.' }], - isError: true, - }; - } - const fullPath = path.join(repo.repoPath, String(filePath)); - const content = await fs.readFile(fullPath, 'utf-8'); - return { content: [{ type: 'text', text: content }] }; - } - - if (name === 'overview') { - return { - content: [{ type: 'text', text: JSON.stringify(repo.meta, null, 2) }], - }; - } - - return { - content: [{ type: 'text', text: `Unknown tool: ${name}` }], - isError: true, - }; - }); - - const transport = new StdioServerTransport(); - await server.connect(transport); -}; diff --git a/gitnexus-cli/src/mcp/tools.ts b/gitnexus-cli/src/mcp/tools.ts deleted file mode 100644 index 6ce5d1e77..000000000 --- a/gitnexus-cli/src/mcp/tools.ts +++ /dev/null @@ -1,47 +0,0 @@ -export const GITNEXUS_TOOLS = [ - { - name: 'search', - description: 'Hybrid search across the indexed repository (BM25 + semantic if available).', - inputSchema: { - type: 'object', - properties: { - query: { type: 'string', description: 'Search query' }, - limit: { type: 'number', description: 'Max results', default: 10 }, - }, - required: ['query'], - }, - }, - { - name: 'cypher', - description: 'Execute a Cypher query on the knowledge graph.', - inputSchema: { - type: 'object', - properties: { - query: { type: 'string', description: 'Cypher query string' }, - }, - required: ['query'], - }, - }, - { - name: 'read', - description: 'Read a file from the repository.', - inputSchema: { - type: 'object', - properties: { - path: { type: 'string', description: 'File path relative to repo root' }, - }, - required: ['path'], - }, - }, - { - name: 'overview', - description: 'Return basic stats for the indexed repository.', - inputSchema: { - type: 'object', - properties: {}, - }, - }, -]; - - - diff --git a/gitnexus-cli/tsconfig.json b/gitnexus-cli/tsconfig.json deleted file mode 100644 index 7fc8c33ce..000000000 --- a/gitnexus-cli/tsconfig.json +++ /dev/null @@ -1,24 +0,0 @@ -{ - "compilerOptions": { - "target": "ES2022", - "lib": [ - "ES2022" - ], - "module": "NodeNext", - "moduleResolution": "NodeNext", - "outDir": "dist", - "rootDir": "src", - "strict": false, - "esModuleInterop": true, - "skipLibCheck": true, - "resolveJsonModule": true, - "forceConsistentCasingInFileNames": true, - "declaration": true, - "types": [ - "node" - ] - }, - "include": [ - "src/**/*" - ] -} \ No newline at end of file diff --git a/gitnexus-test-setup/.gitignore b/gitnexus-test-setup/.gitignore new file mode 100644 index 000000000..c66cf2d98 --- /dev/null +++ b/gitnexus-test-setup/.gitignore @@ -0,0 +1,7 @@ + +# GitNexus AI Context +.gitnexus-rules.md +.cursorrules +.windsurfrules +CLAUDE.md +.github/copilot-instructions.md diff --git a/gitnexus/TODO.md b/gitnexus-web/TODO.md similarity index 100% rename from gitnexus/TODO.md rename to gitnexus-web/TODO.md diff --git a/gitnexus/api/proxy.ts b/gitnexus-web/api/proxy.ts similarity index 100% rename from gitnexus/api/proxy.ts rename to gitnexus-web/api/proxy.ts diff --git a/gitnexus/docs/FRAMEWORK_SUPPORT.md b/gitnexus-web/docs/FRAMEWORK_SUPPORT.md similarity index 100% rename from gitnexus/docs/FRAMEWORK_SUPPORT.md rename to gitnexus-web/docs/FRAMEWORK_SUPPORT.md diff --git a/gitnexus/index.html b/gitnexus-web/index.html similarity index 100% rename from gitnexus/index.html rename to gitnexus-web/index.html diff --git a/gitnexus-web/package-lock.json b/gitnexus-web/package-lock.json new file mode 100644 index 000000000..cf591cb30 --- /dev/null +++ b/gitnexus-web/package-lock.json @@ -0,0 +1,10215 @@ +{ + "name": "gitnexus", + "version": "0.0.0", + "lockfileVersion": 3, + "requires": true, + "packages": { + "": { + "name": "gitnexus", + "version": "0.0.0", + "dependencies": { + "@huggingface/transformers": "^3.0.0", + "@isomorphic-git/lightning-fs": "^4.6.2", + "@langchain/anthropic": "^1.3.10", + 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"dependencies": { + "@huggingface/transformers": "^3.0.0", + "@isomorphic-git/lightning-fs": "^4.6.2", + "@langchain/anthropic": "^1.3.10", + "@langchain/core": "^1.1.15", + "@langchain/google-genai": "^2.1.10", + "@langchain/langgraph": "^1.1.0", + "@langchain/ollama": "^1.2.0", + "@langchain/openai": "^1.2.2", + "@sigma/edge-curve": "^3.1.0", + "@tailwindcss/vite": "^4.1.18", + "axios": "^1.13.2", + "buffer": "^6.0.3", + "comlink": "^4.4.2", + "d3": "^7.9.0", + "graphology": "^0.26.0", + "graphology-communities-louvain": "^2.0.2", + "graphology-layout-force": "^0.2.4", + "graphology-layout-forceatlas2": "^0.10.1", + "graphology-layout-noverlap": "^0.4.2", + "isomorphic-git": "^1.36.1", + "jszip": "^3.10.1", + "kuzu-wasm": "^0.11.1", + "langchain": "^1.2.10", + "lru-cache": "^11.2.4", + "lucide-react": "^0.562.0", + "mermaid": "^11.12.2", + "minisearch": "^7.2.0", + "react": "^18.3.1", + "react-dom": "^18.3.1", + "react-markdown": "^10.1.0", + "react-syntax-highlighter": "^16.1.0", + 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b/gitnexus-web/public/wasm/cpp/tree-sitter-cpp.wasm similarity index 100% rename from gitnexus/public/wasm/cpp/tree-sitter-cpp.wasm rename to gitnexus-web/public/wasm/cpp/tree-sitter-cpp.wasm diff --git a/gitnexus/public/wasm/csharp/tree-sitter-csharp.wasm b/gitnexus-web/public/wasm/csharp/tree-sitter-csharp.wasm similarity index 100% rename from gitnexus/public/wasm/csharp/tree-sitter-csharp.wasm rename to gitnexus-web/public/wasm/csharp/tree-sitter-csharp.wasm diff --git a/gitnexus/public/wasm/go/tree-sitter-go.wasm b/gitnexus-web/public/wasm/go/tree-sitter-go.wasm similarity index 100% rename from gitnexus/public/wasm/go/tree-sitter-go.wasm rename to gitnexus-web/public/wasm/go/tree-sitter-go.wasm diff --git a/gitnexus/public/wasm/java/tree-sitter-java.wasm b/gitnexus-web/public/wasm/java/tree-sitter-java.wasm similarity index 100% rename from gitnexus/public/wasm/java/tree-sitter-java.wasm rename to gitnexus-web/public/wasm/java/tree-sitter-java.wasm diff --git a/gitnexus/public/wasm/javascript/tree-sitter-javascript.wasm b/gitnexus-web/public/wasm/javascript/tree-sitter-javascript.wasm similarity index 100% rename from gitnexus/public/wasm/javascript/tree-sitter-javascript.wasm rename to gitnexus-web/public/wasm/javascript/tree-sitter-javascript.wasm diff --git a/gitnexus/public/wasm/kuzu-wasm.wasm b/gitnexus-web/public/wasm/kuzu-wasm.wasm similarity index 100% rename from gitnexus/public/wasm/kuzu-wasm.wasm rename to gitnexus-web/public/wasm/kuzu-wasm.wasm diff --git a/gitnexus/public/wasm/python/tree-sitter-python.wasm b/gitnexus-web/public/wasm/python/tree-sitter-python.wasm similarity index 100% rename from gitnexus/public/wasm/python/tree-sitter-python.wasm rename to gitnexus-web/public/wasm/python/tree-sitter-python.wasm diff --git a/gitnexus/public/wasm/rust/tree-sitter-rust.wasm b/gitnexus-web/public/wasm/rust/tree-sitter-rust.wasm similarity index 100% rename from gitnexus/public/wasm/rust/tree-sitter-rust.wasm rename to gitnexus-web/public/wasm/rust/tree-sitter-rust.wasm diff --git a/gitnexus/public/wasm/tree-sitter.wasm b/gitnexus-web/public/wasm/tree-sitter.wasm similarity index 100% rename from gitnexus/public/wasm/tree-sitter.wasm rename to gitnexus-web/public/wasm/tree-sitter.wasm diff --git a/gitnexus/public/wasm/typescript/tree-sitter-tsx.wasm b/gitnexus-web/public/wasm/typescript/tree-sitter-tsx.wasm similarity index 100% rename from gitnexus/public/wasm/typescript/tree-sitter-tsx.wasm rename to gitnexus-web/public/wasm/typescript/tree-sitter-tsx.wasm diff --git a/gitnexus/public/wasm/typescript/tree-sitter-typescript.wasm b/gitnexus-web/public/wasm/typescript/tree-sitter-typescript.wasm similarity index 100% rename from gitnexus/public/wasm/typescript/tree-sitter-typescript.wasm rename to gitnexus-web/public/wasm/typescript/tree-sitter-typescript.wasm diff --git a/gitnexus/src/App.tsx b/gitnexus-web/src/App.tsx similarity index 100% rename from gitnexus/src/App.tsx rename to gitnexus-web/src/App.tsx diff --git a/gitnexus/src/components/ActivityFeed.tsx b/gitnexus-web/src/components/ActivityFeed.tsx similarity index 100% rename from gitnexus/src/components/ActivityFeed.tsx rename to gitnexus-web/src/components/ActivityFeed.tsx diff --git a/gitnexus/src/components/CodeReferencesPanel.tsx b/gitnexus-web/src/components/CodeReferencesPanel.tsx similarity index 100% rename from gitnexus/src/components/CodeReferencesPanel.tsx rename to gitnexus-web/src/components/CodeReferencesPanel.tsx diff --git a/gitnexus/src/components/DropZone.tsx b/gitnexus-web/src/components/DropZone.tsx similarity index 100% rename from gitnexus/src/components/DropZone.tsx rename to gitnexus-web/src/components/DropZone.tsx diff --git a/gitnexus/src/components/EmbeddingStatus.tsx b/gitnexus-web/src/components/EmbeddingStatus.tsx similarity index 100% rename from gitnexus/src/components/EmbeddingStatus.tsx rename to gitnexus-web/src/components/EmbeddingStatus.tsx diff --git a/gitnexus/src/components/FileTreePanel.tsx b/gitnexus-web/src/components/FileTreePanel.tsx similarity index 100% rename from gitnexus/src/components/FileTreePanel.tsx rename to gitnexus-web/src/components/FileTreePanel.tsx diff --git a/gitnexus/src/components/GraphCanvas.tsx b/gitnexus-web/src/components/GraphCanvas.tsx similarity index 100% rename from gitnexus/src/components/GraphCanvas.tsx rename to gitnexus-web/src/components/GraphCanvas.tsx diff --git a/gitnexus/src/components/Header.tsx b/gitnexus-web/src/components/Header.tsx similarity index 100% rename from gitnexus/src/components/Header.tsx rename to gitnexus-web/src/components/Header.tsx diff --git a/gitnexus/src/components/IntelligentClusteringModal.tsx b/gitnexus-web/src/components/IntelligentClusteringModal.tsx similarity index 100% rename from gitnexus/src/components/IntelligentClusteringModal.tsx rename to gitnexus-web/src/components/IntelligentClusteringModal.tsx diff --git a/gitnexus/src/components/LoadingOverlay.tsx b/gitnexus-web/src/components/LoadingOverlay.tsx similarity index 100% rename from gitnexus/src/components/LoadingOverlay.tsx rename to gitnexus-web/src/components/LoadingOverlay.tsx diff --git a/gitnexus/src/components/MCPToggle.tsx b/gitnexus-web/src/components/MCPToggle.tsx similarity index 100% rename from gitnexus/src/components/MCPToggle.tsx rename to gitnexus-web/src/components/MCPToggle.tsx diff --git a/gitnexus/src/components/MarkdownRenderer.tsx b/gitnexus-web/src/components/MarkdownRenderer.tsx similarity index 100% rename from gitnexus/src/components/MarkdownRenderer.tsx rename to gitnexus-web/src/components/MarkdownRenderer.tsx diff --git a/gitnexus/src/components/MermaidDiagram.tsx b/gitnexus-web/src/components/MermaidDiagram.tsx similarity index 100% rename from gitnexus/src/components/MermaidDiagram.tsx rename to gitnexus-web/src/components/MermaidDiagram.tsx diff --git a/gitnexus/src/components/ProcessFlowModal.tsx b/gitnexus-web/src/components/ProcessFlowModal.tsx similarity index 100% rename from gitnexus/src/components/ProcessFlowModal.tsx rename to gitnexus-web/src/components/ProcessFlowModal.tsx diff --git a/gitnexus/src/components/ProcessesPanel.tsx b/gitnexus-web/src/components/ProcessesPanel.tsx similarity index 100% rename from gitnexus/src/components/ProcessesPanel.tsx rename to gitnexus-web/src/components/ProcessesPanel.tsx diff --git a/gitnexus/src/components/QueryFAB.tsx b/gitnexus-web/src/components/QueryFAB.tsx similarity index 100% rename from gitnexus/src/components/QueryFAB.tsx rename to gitnexus-web/src/components/QueryFAB.tsx diff --git a/gitnexus/src/components/RightPanel.tsx b/gitnexus-web/src/components/RightPanel.tsx similarity index 100% rename from gitnexus/src/components/RightPanel.tsx rename to gitnexus-web/src/components/RightPanel.tsx diff --git a/gitnexus/src/components/SettingsPanel.tsx b/gitnexus-web/src/components/SettingsPanel.tsx similarity index 100% rename from gitnexus/src/components/SettingsPanel.tsx rename to gitnexus-web/src/components/SettingsPanel.tsx diff --git a/gitnexus/src/components/StatusBar.tsx b/gitnexus-web/src/components/StatusBar.tsx similarity index 100% rename from gitnexus/src/components/StatusBar.tsx rename to gitnexus-web/src/components/StatusBar.tsx diff --git a/gitnexus/src/components/ToolCallCard.tsx b/gitnexus-web/src/components/ToolCallCard.tsx similarity index 100% rename from gitnexus/src/components/ToolCallCard.tsx rename to gitnexus-web/src/components/ToolCallCard.tsx diff --git a/gitnexus/src/components/WebGPUFallbackDialog.tsx b/gitnexus-web/src/components/WebGPUFallbackDialog.tsx similarity index 100% rename from gitnexus/src/components/WebGPUFallbackDialog.tsx rename to gitnexus-web/src/components/WebGPUFallbackDialog.tsx diff --git a/gitnexus-cli/src/config/ignore-service.ts b/gitnexus-web/src/config/ignore-service.ts similarity index 100% rename from gitnexus-cli/src/config/ignore-service.ts rename to gitnexus-web/src/config/ignore-service.ts diff --git a/gitnexus-cli/src/config/supported-languages.ts b/gitnexus-web/src/config/supported-languages.ts similarity index 100% rename from gitnexus-cli/src/config/supported-languages.ts rename to gitnexus-web/src/config/supported-languages.ts diff --git a/gitnexus-cli/src/core/embeddings/embedder.ts b/gitnexus-web/src/core/embeddings/embedder.ts similarity index 58% rename from gitnexus-cli/src/core/embeddings/embedder.ts rename to gitnexus-web/src/core/embeddings/embedder.ts index f0cdcde45..118894583 100644 --- a/gitnexus-cli/src/core/embeddings/embedder.ts +++ b/gitnexus-web/src/core/embeddings/embedder.ts @@ -8,23 +8,59 @@ */ import { pipeline, env, type FeatureExtractionPipeline } from '@huggingface/transformers'; -import { DEFAULT_EMBEDDING_CONFIG, type EmbeddingConfig, type ModelProgress } from './types.js'; +import { DEFAULT_EMBEDDING_CONFIG, type EmbeddingConfig, type ModelProgress } from './types'; // Module-level state for singleton pattern let embedderInstance: FeatureExtractionPipeline | null = null; let isInitializing = false; let initPromise: Promise | null = null; -let currentDevice: 'webgpu' | 'cuda' | 'cpu' | 'wasm' | null = null; +let currentDevice: 'webgpu' | 'wasm' | null = null; /** * Progress callback type for model loading */ export type ModelProgressCallback = (progress: ModelProgress) => void; +/** + * Custom error thrown when WebGPU is not available + * Allows UI to prompt user for fallback choice + */ +export class WebGPUNotAvailableError extends Error { + constructor(originalError?: Error) { + super('WebGPU not available in this browser'); + this.name = 'WebGPUNotAvailableError'; + this.cause = originalError; + } +} + +/** + * Check if WebGPU is available in this browser + * Quick check without loading the model + */ +export const checkWebGPUAvailability = async (): Promise => { + try { + // Cast to any to avoid WebGPU types not being available in all TS configs + const nav = navigator as any; + if (!nav.gpu) { + return false; + } + const adapter = await nav.gpu.requestAdapter(); + if (!adapter) { + return false; + } + // Try to get a device - this is where it usually fails + const device = await adapter.requestDevice(); + device.destroy(); // Clean up + return true; + } catch { + return false; + } +}; + /** * Get the current device being used for inference */ -export const getCurrentDevice = (): 'webgpu' | 'cuda' | 'cpu' | 'wasm' | null => currentDevice; +export const getCurrentDevice = (): 'webgpu' | 'wasm' | null => currentDevice; /** * Initialize the embedding model @@ -32,13 +68,14 @@ export const getCurrentDevice = (): 'webgpu' | 'cuda' | 'cpu' | 'wasm' | null => * * @param onProgress - Optional callback for model download progress * @param config - Optional configuration override - * @param forceDevice - Force a specific device + * @param forceDevice - Force a specific device (bypasses WebGPU check) * @returns Promise resolving to the embedder pipeline + * @throws WebGPUNotAvailableError if WebGPU is requested but unavailable */ export const initEmbedder = async ( onProgress?: ModelProgressCallback, config: Partial = {}, - forceDevice?: 'webgpu' | 'cuda' | 'cpu' | 'wasm' + forceDevice?: 'webgpu' | 'wasm' ): Promise => { // Return existing instance if available if (embedderInstance) { @@ -53,19 +90,14 @@ export const initEmbedder = async ( isInitializing = true; const finalConfig = { ...DEFAULT_EMBEDDING_CONFIG, ...config }; - // On Windows, use webgpu for GPU acceleration (via DirectX12/DirectML) - // CUDA is only available on Linux with onnxruntime-node - const isWindows = process.platform === 'win32'; - const gpuDevice = isWindows ? 'webgpu' : 'cuda'; - let requestedDevice = forceDevice || (finalConfig.device === 'auto' ? gpuDevice : finalConfig.device); + const requestedDevice = forceDevice || finalConfig.device; initPromise = (async () => { try { // Configure transformers.js environment env.allowLocalModels = false; - const isDev = process.env.NODE_ENV !== 'production'; - if (isDev) { + if (import.meta.env.DEV) { console.log(`๐Ÿง  Loading embedding model: ${finalConfig.modelId}`); } @@ -80,59 +112,86 @@ export const initEmbedder = async ( onProgress(progress); } : undefined; - // Try GPU first if auto, fall back to CPU - // Windows: webgpu (DirectX12/DirectML), Linux: cuda - const devicesToTry: Array<'webgpu' | 'cuda' | 'cpu' | 'wasm'> = - (requestedDevice === 'webgpu' || requestedDevice === 'cuda') - ? [requestedDevice, 'cpu'] - : [requestedDevice as 'cpu' | 'wasm']; - - for (const device of devicesToTry) { - try { - if (isDev && device === 'webgpu') { - console.log('๐Ÿ”ง Trying WebGPU (DirectX12) backend...'); - } else if (isDev && device === 'cuda') { - console.log('๐Ÿ”ง Trying CUDA GPU backend...'); - } else if (isDev && device === 'cpu') { - console.log('๐Ÿ”ง Using CPU backend...'); - } else if (isDev && device === 'wasm') { - console.log('๐Ÿ”ง Using WASM backend (slower)...'); + // If WebGPU is requested (default), check availability first + if (requestedDevice === 'webgpu') { + if (import.meta.env.DEV) { + console.log('๐Ÿ”ง Checking WebGPU availability...'); + } + + const webgpuAvailable = await checkWebGPUAvailability(); + + if (!webgpuAvailable) { + if (import.meta.env.DEV) { + console.warn('โš ๏ธ WebGPU not available'); } - + isInitializing = false; + initPromise = null; + throw new WebGPUNotAvailableError(); + } + + // Try WebGPU + try { + if (import.meta.env.DEV) { + console.log('๐Ÿ”ง Initializing WebGPU backend...'); + } + + // Type assertion needed due to complex union types in transformers.js embedderInstance = await (pipeline as any)( 'feature-extraction', finalConfig.modelId, { - device: device, + device: 'webgpu', dtype: 'fp32', progress_callback: progressCallback, } ); - currentDevice = device; - - if (isDev) { - const label = device === 'webgpu' ? 'GPU (WebGPU/DirectX12)' - : device === 'cuda' ? 'GPU (CUDA)' - : device.toUpperCase(); - console.log(`โœ… Using ${label} backend`); - console.log('โœ… Embedding model loaded successfully'); + currentDevice = 'webgpu'; + + if (import.meta.env.DEV) { + console.log('โœ… Using WebGPU backend'); } - - return embedderInstance!; - } catch (deviceError) { - if (isDev && (device === 'cuda' || device === 'webgpu')) { - const gpuType = device === 'webgpu' ? 'WebGPU' : 'CUDA'; - console.log(`โš ๏ธ ${gpuType} not available, falling back to CPU...`); + } catch (err) { + if (import.meta.env.DEV) { + console.warn('โš ๏ธ WebGPU initialization failed:', err); } - // Continue to next device in list - if (device === devicesToTry[devicesToTry.length - 1]) { - throw deviceError; // Last device failed, propagate error + isInitializing = false; + initPromise = null; + embedderInstance = null; + throw new WebGPUNotAvailableError(err as Error); + } + } else { + // WASM mode requested (user chose fallback) + if (import.meta.env.DEV) { + console.log('๐Ÿ”ง Initializing WASM backend (this will be slower)...'); + } + + // Type assertion needed due to complex union types in transformers.js + embedderInstance = await (pipeline as any)( + 'feature-extraction', + finalConfig.modelId, + { + device: 'wasm', // WASM-based CPU execution + dtype: 'fp32', + progress_callback: progressCallback, } + ); + currentDevice = 'wasm'; + + if (import.meta.env.DEV) { + console.log('โœ… Using WASM backend'); } } - throw new Error('No suitable device found for embedding model'); + if (import.meta.env.DEV) { + console.log('โœ… Embedding model loaded successfully'); + } + + return embedderInstance!; } catch (error) { + // Re-throw WebGPUNotAvailableError as-is + if (error instanceof WebGPUNotAvailableError) { + throw error; + } isInitializing = false; initPromise = null; embedderInstance = null; diff --git a/gitnexus-cli/src/core/embeddings/embedding-pipeline.ts b/gitnexus-web/src/core/embeddings/embedding-pipeline.ts similarity index 97% rename from gitnexus-cli/src/core/embeddings/embedding-pipeline.ts rename to gitnexus-web/src/core/embeddings/embedding-pipeline.ts index 128e5d937..05f8ae7ed 100644 --- a/gitnexus-cli/src/core/embeddings/embedding-pipeline.ts +++ b/gitnexus-web/src/core/embeddings/embedding-pipeline.ts @@ -9,8 +9,8 @@ * 5. Create vector index for semantic search */ -import { initEmbedder, embedBatch, embedText, embeddingToArray, isEmbedderReady } from './embedder.js'; -import { generateBatchEmbeddingTexts, generateEmbeddingText } from './text-generator.js'; +import { initEmbedder, embedBatch, embedText, embeddingToArray, isEmbedderReady } from './embedder'; +import { generateBatchEmbeddingTexts, generateEmbeddingText } from './text-generator'; import { type EmbeddingProgress, type EmbeddingConfig, @@ -19,9 +19,7 @@ import { type ModelProgress, DEFAULT_EMBEDDING_CONFIG, EMBEDDABLE_LABELS, -} from './types.js'; - -const isDev = process.env.NODE_ENV !== 'production'; +} from './types'; /** * Progress callback type @@ -73,7 +71,7 @@ const queryEmbeddableNodes = async ( } } catch (error) { // Table might not exist or be empty, continue - if (isDev) { + if (import.meta.env.DEV) { console.warn(`Query for ${label} nodes failed:`, error); } } @@ -115,7 +113,7 @@ const createVectorIndex = async ( await executeQuery(cypher); } catch (error) { // Index might already exist - if (isDev) { + if (import.meta.env.DEV) { console.warn('Vector index creation warning:', error); } } @@ -161,7 +159,7 @@ export const runEmbeddingPipeline = async ( modelDownloadPercent: 100, }); - if (isDev) { + if (import.meta.env.DEV) { console.log('๐Ÿ” Querying embeddable nodes...'); } @@ -169,7 +167,7 @@ export const runEmbeddingPipeline = async ( const nodes = await queryEmbeddableNodes(executeQuery); const totalNodes = nodes.length; - if (isDev) { + if (import.meta.env.DEV) { console.log(`๐Ÿ“Š Found ${totalNodes} embeddable nodes`); } @@ -238,7 +236,7 @@ export const runEmbeddingPipeline = async ( totalNodes, }); - if (isDev) { + if (import.meta.env.DEV) { console.log('๐Ÿ“‡ Creating vector index...'); } @@ -252,13 +250,13 @@ export const runEmbeddingPipeline = async ( totalNodes, }); - if (isDev) { + if (import.meta.env.DEV) { console.log('โœ… Embedding pipeline complete!'); } } catch (error) { const errorMessage = error instanceof Error ? error.message : 'Unknown error'; - if (isDev) { + if (import.meta.env.DEV) { console.error('โŒ Embedding pipeline error:', error); } diff --git a/gitnexus-web/src/core/embeddings/index.ts b/gitnexus-web/src/core/embeddings/index.ts new file mode 100644 index 000000000..5d384c8d5 --- /dev/null +++ b/gitnexus-web/src/core/embeddings/index.ts @@ -0,0 +1,11 @@ +/** + * Embeddings Module + * + * Re-exports for the embedding pipeline system. + */ + +export * from './types'; +export * from './embedder'; +export * from './text-generator'; +export * from './embedding-pipeline'; + diff --git a/gitnexus-cli/src/core/embeddings/text-generator.ts b/gitnexus-web/src/core/embeddings/text-generator.ts similarity index 97% rename from gitnexus-cli/src/core/embeddings/text-generator.ts rename to gitnexus-web/src/core/embeddings/text-generator.ts index e3a99ff49..36594e1a8 100644 --- a/gitnexus-cli/src/core/embeddings/text-generator.ts +++ b/gitnexus-web/src/core/embeddings/text-generator.ts @@ -5,8 +5,8 @@ * Combines node metadata with code snippets for semantic matching. */ -import type { EmbeddableNode, EmbeddingConfig } from './types.js'; -import { DEFAULT_EMBEDDING_CONFIG } from './types.js'; +import type { EmbeddableNode, EmbeddingConfig } from './types'; +import { DEFAULT_EMBEDDING_CONFIG } from './types'; /** * Extract the filename from a file path diff --git a/gitnexus-cli/src/core/embeddings/types.ts b/gitnexus-web/src/core/embeddings/types.ts similarity index 92% rename from gitnexus-cli/src/core/embeddings/types.ts rename to gitnexus-web/src/core/embeddings/types.ts index b769b950c..e4a04222b 100644 --- a/gitnexus-cli/src/core/embeddings/types.ts +++ b/gitnexus-web/src/core/embeddings/types.ts @@ -59,8 +59,8 @@ export interface EmbeddingConfig { batchSize: number; /** Embedding vector dimensions */ dimensions: number; - /** Device to use for inference: 'auto' tries GPU first, falls back to CPU */ - device: 'auto' | 'webgpu' | 'cuda' | 'cpu' | 'wasm'; + /** Device to use for inference: 'webgpu' for GPU acceleration, 'wasm' for WASM-based CPU */ + device: 'webgpu' | 'wasm'; /** Maximum characters of code snippet to include */ maxSnippetLength: number; } @@ -74,7 +74,7 @@ export const DEFAULT_EMBEDDING_CONFIG: EmbeddingConfig = { modelId: 'Snowflake/snowflake-arctic-embed-xs', batchSize: 16, dimensions: 384, - device: 'auto', + device: 'webgpu', // WebGPU preferred, WASM fallback available if user chooses maxSnippetLength: 500, }; diff --git a/gitnexus-cli/src/core/graph/graph.ts b/gitnexus-web/src/core/graph/graph.ts similarity index 98% rename from gitnexus-cli/src/core/graph/graph.ts rename to gitnexus-web/src/core/graph/graph.ts index 695daf2bf..1f9653b95 100644 --- a/gitnexus-cli/src/core/graph/graph.ts +++ b/gitnexus-web/src/core/graph/graph.ts @@ -1,4 +1,4 @@ -import { GraphNode, GraphRelationship, KnowledgeGraph } from './types.js' +import { GraphNode, GraphRelationship, KnowledgeGraph } from './types' export const createKnowledgeGraph = (): KnowledgeGraph => { const nodeMap = new Map(); diff --git a/gitnexus-cli/src/core/graph/types.ts b/gitnexus-web/src/core/graph/types.ts similarity index 100% rename from gitnexus-cli/src/core/graph/types.ts rename to gitnexus-web/src/core/graph/types.ts diff --git a/gitnexus-cli/src/core/ingestion/ast-cache.ts b/gitnexus-web/src/core/ingestion/ast-cache.ts similarity index 82% rename from gitnexus-cli/src/core/ingestion/ast-cache.ts rename to gitnexus-web/src/core/ingestion/ast-cache.ts index 0ae105120..61775416a 100644 --- a/gitnexus-cli/src/core/ingestion/ast-cache.ts +++ b/gitnexus-web/src/core/ingestion/ast-cache.ts @@ -1,5 +1,5 @@ import { LRUCache } from 'lru-cache'; -import Parser from 'tree-sitter'; +import Parser from 'web-tree-sitter'; // Define the interface for the Cache export interface ASTCache { @@ -16,9 +16,8 @@ export const createASTCache = (maxSize: number = 50): ASTCache => { max: maxSize, dispose: (tree) => { try { - // NOTE: web-tree-sitter has tree.delete(); native tree-sitter trees are GC-managed. - // Keep this try/catch so we don't crash on either runtime. - (tree as any).delete?.(); + // CRITICAL: Free the WASM memory when the tree leaves the cache + tree.delete(); } catch (e) { console.warn('Failed to delete tree from WASM memory', e); } diff --git a/gitnexus-cli/src/core/ingestion/call-processor.ts b/gitnexus-web/src/core/ingestion/call-processor.ts similarity index 93% rename from gitnexus-cli/src/core/ingestion/call-processor.ts rename to gitnexus-web/src/core/ingestion/call-processor.ts index 895e55352..2b71c5aaa 100644 --- a/gitnexus-cli/src/core/ingestion/call-processor.ts +++ b/gitnexus-web/src/core/ingestion/call-processor.ts @@ -1,12 +1,11 @@ -import { KnowledgeGraph } from '../graph/types.js'; -import { ASTCache } from './ast-cache.js'; -import { SymbolTable } from './symbol-table.js'; -import { ImportMap } from './import-processor.js'; -import Parser from 'tree-sitter'; -import { loadParser, loadLanguage } from '../tree-sitter/parser-loader.js'; -import { LANGUAGE_QUERIES } from './tree-sitter-queries.js'; -import { generateId } from '../../lib/utils.js'; -import { getLanguageFromFilename } from './utils.js'; +import { KnowledgeGraph } from '../graph/types'; +import { ASTCache } from './ast-cache'; +import { SymbolTable } from './symbol-table'; +import { ImportMap } from './import-processor'; +import { loadParser, loadLanguage } from '../tree-sitter/parser-loader'; +import { LANGUAGE_QUERIES } from './tree-sitter-queries'; +import { generateId } from '../../lib/utils'; +import { getLanguageFromFilename } from './utils'; /** * Node types that represent function/method definitions across languages. @@ -157,25 +156,18 @@ export const processCalls = async ( if (!tree) { // Cache Miss: Re-parse - // Use larger bufferSize for files > 32KB - try { - tree = parser.parse(file.content, undefined, { bufferSize: 1024 * 256 }); - } catch (parseError) { - // Skip files that can't be parsed - continue; - } + tree = parser.parse(file.content); wasReparsed = true; } let query; let matches; try { - const language = parser.getLanguage(); - query = new Parser.Query(language, queryStr); + query = parser.getLanguage().query(queryStr); matches = query.matches(tree.rootNode); } catch (queryError) { console.warn(`Query error for ${file.path}:`, queryError); - if (wasReparsed) (tree as any).delete?.(); + if (wasReparsed) tree.delete(); continue; } @@ -226,7 +218,7 @@ export const processCalls = async ( // Cleanup if re-parsed if (wasReparsed) { - (tree as any).delete?.(); + tree.delete(); } } }; diff --git a/gitnexus-cli/src/core/ingestion/cluster-enricher.ts b/gitnexus-web/src/core/ingestion/cluster-enricher.ts similarity index 99% rename from gitnexus-cli/src/core/ingestion/cluster-enricher.ts rename to gitnexus-web/src/core/ingestion/cluster-enricher.ts index 0154e3bf3..51e00d618 100644 --- a/gitnexus-cli/src/core/ingestion/cluster-enricher.ts +++ b/gitnexus-web/src/core/ingestion/cluster-enricher.ts @@ -5,7 +5,7 @@ * Generates semantic names, keywords, and descriptions using an LLM. */ -import { CommunityNode } from './community-processor.js'; +import { CommunityNode } from './community-processor'; // ============================================================================ // TYPES diff --git a/gitnexus-cli/src/core/ingestion/community-processor.ts b/gitnexus-web/src/core/ingestion/community-processor.ts similarity index 95% rename from gitnexus-cli/src/core/ingestion/community-processor.ts rename to gitnexus-web/src/core/ingestion/community-processor.ts index 42194c076..1a8901acc 100644 --- a/gitnexus-cli/src/core/ingestion/community-processor.ts +++ b/gitnexus-web/src/core/ingestion/community-processor.ts @@ -8,11 +8,9 @@ * helping agents navigate the codebase by functional area rather than file structure. */ -// NOTE: graphology + louvain typings are a bit inconsistent across versions. -// Keep these as `any` to avoid blocking the CLI build. import Graph from 'graphology'; import louvain from 'graphology-communities-louvain'; -import { KnowledgeGraph, NodeLabel } from '../graph/types.js'; +import { KnowledgeGraph, NodeLabel } from '../graph/types'; // ============================================================================ // TYPES @@ -96,7 +94,7 @@ export const processCommunities = async ( onProgress?.(`Running Leiden algorithm on ${graph.order} nodes...`, 30); // Step 2: Run Leiden (via Louvain implementation with refinement) - const details = (louvain as any).detailed(graph, { + const details = louvain.detailed(graph, { resolution: 1.0, // Default resolution, can be tuned randomWalk: true, }); @@ -143,9 +141,9 @@ export const processCommunities = async ( * Build a graphology graph containing only symbol nodes and CALLS edges * This is what the Leiden algorithm will cluster */ -const buildGraphologyGraph = (knowledgeGraph: KnowledgeGraph): any => { +const buildGraphologyGraph = (knowledgeGraph: KnowledgeGraph): Graph => { // Use undirected graph for Leiden - it looks at edge density, not direction - const graph = new (Graph as any)({ type: 'undirected', allowSelfLoops: false }); + const graph = new Graph({ type: 'undirected', allowSelfLoops: false }); // Symbol types that should be clustered const symbolTypes = new Set(['Function', 'Class', 'Method', 'Interface']); @@ -191,7 +189,7 @@ const buildGraphologyGraph = (knowledgeGraph: KnowledgeGraph): any => { const createCommunityNodes = ( communities: Record, communityCount: number, - graph: any, + graph: Graph, knowledgeGraph: KnowledgeGraph ): CommunityNode[] => { // Group node IDs by community @@ -246,7 +244,7 @@ const createCommunityNodes = ( const generateHeuristicLabel = ( memberIds: string[], nodePathMap: Map, - graph: any, + graph: Graph, commNum: number ): string => { // Collect folder names from file paths @@ -327,7 +325,7 @@ const findCommonPrefix = (strings: string[]): string => { * Calculate cohesion score (0-1) based on internal edge density * Higher cohesion = more internal connections relative to size */ -const calculateCohesion = (memberIds: string[], graph: any): number => { +const calculateCohesion = (memberIds: string[], graph: Graph): number => { if (memberIds.length <= 1) return 1.0; const memberSet = new Set(memberIds); diff --git a/gitnexus-cli/src/core/ingestion/entry-point-scoring.ts b/gitnexus-web/src/core/ingestion/entry-point-scoring.ts similarity index 99% rename from gitnexus-cli/src/core/ingestion/entry-point-scoring.ts rename to gitnexus-web/src/core/ingestion/entry-point-scoring.ts index 55d0b1035..1ef3d3ddc 100644 --- a/gitnexus-cli/src/core/ingestion/entry-point-scoring.ts +++ b/gitnexus-web/src/core/ingestion/entry-point-scoring.ts @@ -10,7 +10,7 @@ * This module is language-agnostic - language-specific patterns are defined per language. */ -import { detectFrameworkFromPath } from './framework-detection.js'; +import { detectFrameworkFromPath } from './framework-detection'; // ============================================================================ // NAME PATTERNS - All 9 supported languages diff --git a/gitnexus-cli/src/core/ingestion/framework-detection.ts b/gitnexus-web/src/core/ingestion/framework-detection.ts similarity index 100% rename from gitnexus-cli/src/core/ingestion/framework-detection.ts rename to gitnexus-web/src/core/ingestion/framework-detection.ts diff --git a/gitnexus-cli/src/core/ingestion/heritage-processor.ts b/gitnexus-web/src/core/ingestion/heritage-processor.ts similarity index 85% rename from gitnexus-cli/src/core/ingestion/heritage-processor.ts rename to gitnexus-web/src/core/ingestion/heritage-processor.ts index f0143a77d..378a3bdd1 100644 --- a/gitnexus-cli/src/core/ingestion/heritage-processor.ts +++ b/gitnexus-web/src/core/ingestion/heritage-processor.ts @@ -6,14 +6,13 @@ * - IMPLEMENTS: Class implements an Interface (TS only) */ -import { KnowledgeGraph } from '../graph/types.js'; -import { ASTCache } from './ast-cache.js'; -import { SymbolTable } from './symbol-table.js'; -import Parser from 'tree-sitter'; -import { loadParser, loadLanguage } from '../tree-sitter/parser-loader.js'; -import { LANGUAGE_QUERIES } from './tree-sitter-queries.js'; -import { generateId } from '../../lib/utils.js'; -import { getLanguageFromFilename } from './utils.js'; +import { KnowledgeGraph } from '../graph/types'; +import { ASTCache } from './ast-cache'; +import { SymbolTable } from './symbol-table'; +import { loadParser, loadLanguage } from '../tree-sitter/parser-loader'; +import { LANGUAGE_QUERIES } from './tree-sitter-queries'; +import { generateId } from '../../lib/utils'; +import { getLanguageFromFilename } from './utils'; export const processHeritage = async ( graph: KnowledgeGraph, @@ -43,25 +42,18 @@ export const processHeritage = async ( let wasReparsed = false; if (!tree) { - // Use larger bufferSize for files > 32KB - try { - tree = parser.parse(file.content, undefined, { bufferSize: 1024 * 256 }); - } catch (parseError) { - // Skip files that can't be parsed - continue; - } + tree = parser.parse(file.content); wasReparsed = true; } let query; let matches; try { - const language = parser.getLanguage(); - query = new Parser.Query(language, queryStr); + query = parser.getLanguage().query(queryStr); matches = query.matches(tree.rootNode); } catch (queryError) { console.warn(`Heritage query error for ${file.path}:`, queryError); - if (wasReparsed) (tree as any).delete?.(); + if (wasReparsed) tree.delete(); continue; } @@ -156,7 +148,7 @@ export const processHeritage = async ( // Cleanup if (wasReparsed) { - (tree as any).delete?.(); + tree.delete(); } } }; diff --git a/gitnexus-cli/src/core/ingestion/import-processor.ts b/gitnexus-web/src/core/ingestion/import-processor.ts similarity index 89% rename from gitnexus-cli/src/core/ingestion/import-processor.ts rename to gitnexus-web/src/core/ingestion/import-processor.ts index aeac2162f..c0cb6bd68 100644 --- a/gitnexus-cli/src/core/ingestion/import-processor.ts +++ b/gitnexus-web/src/core/ingestion/import-processor.ts @@ -1,12 +1,9 @@ -import { KnowledgeGraph } from '../graph/types.js'; -import { ASTCache } from './ast-cache.js'; -import Parser from 'tree-sitter'; -import { loadParser, loadLanguage } from '../tree-sitter/parser-loader.js'; -import { LANGUAGE_QUERIES } from './tree-sitter-queries.js'; -import { generateId } from '../../lib/utils.js'; -import { getLanguageFromFilename } from './utils.js'; - -const isDev = process.env.NODE_ENV !== 'production'; +import { KnowledgeGraph } from '../graph/types'; +import { ASTCache } from './ast-cache'; +import { loadParser, loadLanguage } from '../tree-sitter/parser-loader'; +import { LANGUAGE_QUERIES } from './tree-sitter-queries'; +import { generateId } from '../../lib/utils'; +import { getLanguageFromFilename } from './utils'; // Type: Map> // Stores all files that a given file imports from @@ -144,21 +141,14 @@ export const processImports = async ( if (!tree) { // Cache Miss: Re-parse (slower, but necessary if evicted) - // Use larger bufferSize for files > 32KB - try { - tree = parser.parse(file.content, undefined, { bufferSize: 1024 * 256 }); - } catch (parseError) { - // Skip files that can't be parsed - continue; - } + tree = parser.parse(file.content); wasReparsed = true; } let query; let matches; try { - const language = parser.getLanguage(); - query = new Parser.Query(language, queryStr); + query = parser.getLanguage().query(queryStr); matches = query.matches(tree.rootNode); // Removed verbose Java import logging @@ -173,7 +163,7 @@ export const processImports = async ( console.log('AST has errors:', tree.rootNode?.hasError); console.groupEnd(); - if (wasReparsed) (tree as any).delete?.(); + if (wasReparsed) tree.delete(); continue; } @@ -184,7 +174,7 @@ export const processImports = async ( if (captureMap['import']) { const sourceNode = captureMap['import.source']; if (!sourceNode) { - if (isDev) { + if (import.meta.env.DEV) { console.log(`โš ๏ธ Import captured but no source node in ${file.path}`); } return; @@ -234,11 +224,11 @@ export const processImports = async ( // If re-parsed just for this, delete the tree to save memory if (wasReparsed) { - (tree as any).delete?.(); + tree.delete(); } } - if (isDev) { + if (import.meta.env.DEV) { console.log(`๐Ÿ“Š Import processing complete: ${totalImportsResolved}/${totalImportsFound} imports resolved to graph edges`); } }; diff --git a/gitnexus-cli/src/core/ingestion/parsing-processor.ts b/gitnexus-web/src/core/ingestion/parsing-processor.ts similarity index 91% rename from gitnexus-cli/src/core/ingestion/parsing-processor.ts rename to gitnexus-web/src/core/ingestion/parsing-processor.ts index cca7098ea..807bcf581 100644 --- a/gitnexus-cli/src/core/ingestion/parsing-processor.ts +++ b/gitnexus-web/src/core/ingestion/parsing-processor.ts @@ -1,11 +1,10 @@ -import { KnowledgeGraph, GraphNode, GraphRelationship } from '../graph/types.js'; -import Parser from 'tree-sitter'; -import { loadParser, loadLanguage } from '../tree-sitter/parser-loader.js'; -import { LANGUAGE_QUERIES } from './tree-sitter-queries.js'; -import { generateId } from '../../lib/utils.js'; -import { SymbolTable } from './symbol-table.js'; -import { ASTCache } from './ast-cache.js'; -import { getLanguageFromFilename } from './utils.js'; +import { KnowledgeGraph, GraphNode, GraphRelationship } from '../graph/types'; +import { loadParser, loadLanguage } from '../tree-sitter/parser-loader'; +import { LANGUAGE_QUERIES } from './tree-sitter-queries'; +import { generateId } from '../../lib/utils'; +import { SymbolTable } from './symbol-table'; +import { ASTCache } from './ast-cache'; +import { getLanguageFromFilename } from './utils'; export type FileProgressCallback = (current: number, total: number, filePath: string) => void; @@ -135,15 +134,7 @@ export const processParsing = async ( await loadLanguage(language, file.path); // 3. Parse the text content into an AST - // Use larger bufferSize for files > 32KB (default limit) - let tree; - try { - tree = parser.parse(file.content, undefined, { bufferSize: 1024 * 256 }); - } catch (parseError) { - // Skip files that can't be parsed (binary, encoding issues, etc.) - console.warn(`Skipping unparseable file: ${file.path}`); - continue; - } + const tree = parser.parse(file.content); // Store in cache immediately (this might evict an old one) astCache.set(file.path, tree); @@ -159,8 +150,7 @@ export const processParsing = async ( let query; let matches; try { - const language = parser.getLanguage(); - query = new Parser.Query(language, queryString); + query = parser.getLanguage().query(queryString); matches = query.matches(tree.rootNode); } catch (queryError) { console.warn(`Query error for ${file.path}:`, queryError); diff --git a/gitnexus-web/src/core/ingestion/pipeline.ts b/gitnexus-web/src/core/ingestion/pipeline.ts new file mode 100644 index 000000000..8c276b312 --- /dev/null +++ b/gitnexus-web/src/core/ingestion/pipeline.ts @@ -0,0 +1,304 @@ +import { createKnowledgeGraph } from '../graph/graph'; +import { extractZip, FileEntry } from '../../services/zip'; +import { processStructure } from './structure-processor'; +import { processParsing } from './parsing-processor'; +import { processImports, createImportMap } from './import-processor'; +import { processCalls } from './call-processor'; +import { processHeritage } from './heritage-processor'; +import { processCommunities, CommunityDetectionResult } from './community-processor'; +import { processProcesses, ProcessDetectionResult } from './process-processor'; +import { createSymbolTable } from './symbol-table'; +import { createASTCache } from './ast-cache'; +import { PipelineProgress, PipelineResult } from '../../types/pipeline'; + +/** + * Run the ingestion pipeline from a ZIP file + */ +export const runIngestionPipeline = async ( file: File, onProgress: (progress: PipelineProgress) => void): Promise => { + // Phase 1: Extracting (0-15%) + onProgress({ + phase: 'extracting', + percent: 0, + message: 'Extracting ZIP file...', + }); + + // Fake progress for extraction (JSZip doesn't expose progress) + const fakeExtractionProgress = setInterval(() => { + onProgress({ + phase: 'extracting', + percent: Math.min(14, Math.random() * 10 + 5), + message: 'Extracting ZIP file...', + }); + }, 200); + + const files = await extractZip(file); + clearInterval(fakeExtractionProgress); + + // Continue with common pipeline + return runPipelineFromFiles(files, onProgress); +}; + +/** + * Run the ingestion pipeline from pre-extracted files (e.g., from git clone) + */ +export const runPipelineFromFiles = async ( + files: FileEntry[], + onProgress: (progress: PipelineProgress) => void +): Promise => { + const graph = createKnowledgeGraph(); + const fileContents = new Map(); + const symbolTable = createSymbolTable(); + const astCache = createASTCache(50); // Keep last 50 files hot + const importMap = createImportMap(); + + // Cleanup function for error handling + const cleanup = () => { + astCache.clear(); + symbolTable.clear(); + }; + + try { + // Store file contents for code panel + files.forEach(f => fileContents.set(f.path, f.content)); + + onProgress({ + phase: 'extracting', + percent: 15, + message: 'ZIP extracted successfully', + stats: { filesProcessed: 0, totalFiles: files.length, nodesCreated: 0 }, + }); + + // Phase 2: Structure (15-30%) + onProgress({ + phase: 'structure', + percent: 15, + message: 'Analyzing project structure...', + stats: { filesProcessed: 0, totalFiles: files.length, nodesCreated: 0 }, + }); + + const filePaths = files.map(f => f.path); + processStructure(graph, filePaths); + + onProgress({ + phase: 'structure', + percent: 30, + message: 'Project structure analyzed', + stats: { filesProcessed: files.length, totalFiles: files.length, nodesCreated: graph.nodeCount }, + }); + + // Phase 3: Parsing (30-70%) + onProgress({ + phase: 'parsing', + percent: 30, + message: 'Parsing code definitions...', + stats: { filesProcessed: 0, totalFiles: files.length, nodesCreated: graph.nodeCount }, + }); + + await processParsing(graph, files, symbolTable, astCache, (current, total, filePath) => { + const parsingProgress = 30 + ((current / total) * 40); + onProgress({ + phase: 'parsing', + percent: Math.round(parsingProgress), + message: 'Parsing code definitions...', + detail: filePath, + stats: { filesProcessed: current, totalFiles: total, nodesCreated: graph.nodeCount }, + }); + }); + + + // Phase 4: Imports (70-82%) + onProgress({ + phase: 'imports', + percent: 70, + message: 'Resolving imports...', + stats: { filesProcessed: 0, totalFiles: files.length, nodesCreated: graph.nodeCount }, + }); + + await processImports(graph, files, astCache, importMap, (current, total) => { + const importProgress = 70 + ((current / total) * 12); + onProgress({ + phase: 'imports', + percent: Math.round(importProgress), + message: 'Resolving imports...', + stats: { filesProcessed: current, totalFiles: total, nodesCreated: graph.nodeCount }, + }); + }); + + // Debug: Count IMPORTS relationships + if (import.meta.env.DEV) { + const importsCount = graph.relationships.filter(r => r.type === 'IMPORTS').length; + console.log(`๐Ÿ“Š Pipeline: After import phase, graph has ${importsCount} IMPORTS relationships (total: ${graph.relationshipCount})`); + if (importsCount > 0) { + const sample = graph.relationships.filter(r => r.type === 'IMPORTS').slice(0, 3); + sample.forEach(r => console.log(` Sample IMPORTS: ${r.sourceId} โ†’ ${r.targetId}`)); + } + } + + + // Phase 5: Calls (82-98%) + onProgress({ + phase: 'calls', + percent: 82, + message: 'Tracing function calls...', + stats: { filesProcessed: 0, totalFiles: files.length, nodesCreated: graph.nodeCount }, + }); + + await processCalls(graph, files, astCache, symbolTable, importMap, (current, total) => { + const callProgress = 82 + ((current / total) * 10); + onProgress({ + phase: 'calls', + percent: Math.round(callProgress), + message: 'Tracing function calls...', + stats: { filesProcessed: current, totalFiles: total, nodesCreated: graph.nodeCount }, + }); + }); + + // Phase 6: Heritage - Class inheritance (92-98%) + onProgress({ + phase: 'heritage', + percent: 92, + message: 'Extracting class inheritance...', + stats: { filesProcessed: 0, totalFiles: files.length, nodesCreated: graph.nodeCount }, + }); + + await processHeritage(graph, files, astCache, symbolTable, (current, total) => { + const heritageProgress = 88 + ((current / total) * 4); + onProgress({ + phase: 'heritage', + percent: Math.round(heritageProgress), + message: 'Extracting class inheritance...', + stats: { filesProcessed: current, totalFiles: total, nodesCreated: graph.nodeCount }, + }); + }); + + // Phase 7: Community Detection (92-98%) + onProgress({ + phase: 'communities', + percent: 92, + message: 'Detecting code communities...', + stats: { filesProcessed: files.length, totalFiles: files.length, nodesCreated: graph.nodeCount }, + }); + + const communityResult = await processCommunities(graph, (message, progress) => { + const communityProgress = 92 + (progress * 0.06); + onProgress({ + phase: 'communities', + percent: Math.round(communityProgress), + message, + stats: { filesProcessed: files.length, totalFiles: files.length, nodesCreated: graph.nodeCount }, + }); + }); + + // Log community detection results + if (import.meta.env.DEV) { + console.log(`๐Ÿ˜๏ธ Community detection: ${communityResult.stats.totalCommunities} communities found (modularity: ${communityResult.stats.modularity.toFixed(3)})`); + } + + // Add community nodes to the graph + communityResult.communities.forEach(comm => { + graph.addNode({ + id: comm.id, + label: 'Community' as const, + properties: { + name: comm.label, + filePath: '', + heuristicLabel: comm.heuristicLabel, + cohesion: comm.cohesion, + symbolCount: comm.symbolCount, + } + }); + }); + + // Add MEMBER_OF relationships + communityResult.memberships.forEach(membership => { + graph.addRelationship({ + id: `${membership.nodeId}_member_of_${membership.communityId}`, + type: 'MEMBER_OF', + sourceId: membership.nodeId, + targetId: membership.communityId, + confidence: 1.0, + reason: 'leiden-algorithm', + }); + }); + + // Phase 8: Process Detection (98-99%) + onProgress({ + phase: 'processes', + percent: 98, + message: 'Detecting execution flows...', + stats: { filesProcessed: files.length, totalFiles: files.length, nodesCreated: graph.nodeCount }, + }); + + const processResult = await processProcesses( + graph, + communityResult.memberships, + (message, progress) => { + const processProgress = 98 + (progress * 0.01); + onProgress({ + phase: 'processes', + percent: Math.round(processProgress), + message, + stats: { filesProcessed: files.length, totalFiles: files.length, nodesCreated: graph.nodeCount }, + }); + } + ); + + // Log process detection results + if (import.meta.env.DEV) { + console.log(`๐Ÿ”„ Process detection: ${processResult.stats.totalProcesses} processes found (${processResult.stats.crossCommunityCount} cross-community)`); + } + + // Add Process nodes to the graph + processResult.processes.forEach(proc => { + graph.addNode({ + id: proc.id, + label: 'Process' as const, + properties: { + name: proc.label, + filePath: '', + heuristicLabel: proc.heuristicLabel, + processType: proc.processType, + stepCount: proc.stepCount, + communities: proc.communities, + entryPointId: proc.entryPointId, + terminalId: proc.terminalId, + } + }); + }); + + // Add STEP_IN_PROCESS relationships + processResult.steps.forEach(step => { + graph.addRelationship({ + id: `${step.nodeId}_step_${step.step}_${step.processId}`, + type: 'STEP_IN_PROCESS', + sourceId: step.nodeId, + targetId: step.processId, + confidence: 1.0, + reason: 'trace-detection', + step: step.step, + }); + }); + + + // Phase 9: Complete (100%) + onProgress({ + phase: 'complete', + percent: 100, + message: `Graph complete! ${communityResult.stats.totalCommunities} communities, ${processResult.stats.totalProcesses} processes detected.`, + stats: { + filesProcessed: files.length, + totalFiles: files.length, + nodesCreated: graph.nodeCount + }, + }); + + // Cleanup WASM memory before returning + astCache.clear(); + + return { graph, fileContents, communityResult, processResult }; + + } catch (error) { + cleanup(); + throw error; + } +}; diff --git a/gitnexus-cli/src/core/ingestion/process-processor.ts b/gitnexus-web/src/core/ingestion/process-processor.ts similarity index 98% rename from gitnexus-cli/src/core/ingestion/process-processor.ts rename to gitnexus-web/src/core/ingestion/process-processor.ts index ccb1bf1cc..cf983d2e6 100644 --- a/gitnexus-cli/src/core/ingestion/process-processor.ts +++ b/gitnexus-web/src/core/ingestion/process-processor.ts @@ -10,11 +10,9 @@ * Processes help agents understand how features work through the codebase. */ -import { KnowledgeGraph, GraphNode, GraphRelationship, NodeLabel } from '../graph/types.js'; -import { CommunityMembership } from './community-processor.js'; -import { calculateEntryPointScore, isTestFile } from './entry-point-scoring.js'; - -const isDev = process.env.NODE_ENV !== 'production'; +import { KnowledgeGraph, GraphNode, GraphRelationship, NodeLabel } from '../graph/types'; +import { CommunityMembership } from './community-processor'; +import { calculateEntryPointScore, isTestFile } from './entry-point-scoring'; // ============================================================================ // CONFIGURATION @@ -291,7 +289,7 @@ const findEntryPoints = ( const sorted = entryPointCandidates.sort((a, b) => b.score - a.score); // DEBUG: Log top candidates with new scoring details - if (sorted.length > 0 && isDev) { + if (sorted.length > 0 && typeof import.meta !== 'undefined' && import.meta.env?.DEV) { console.log(`[Process] Top 10 entry point candidates (new scoring):`); sorted.slice(0, 10).forEach((c, i) => { const node = graph.nodes.find(n => n.id === c.id); diff --git a/gitnexus-cli/src/core/ingestion/structure-processor.ts b/gitnexus-web/src/core/ingestion/structure-processor.ts similarity index 95% rename from gitnexus-cli/src/core/ingestion/structure-processor.ts rename to gitnexus-web/src/core/ingestion/structure-processor.ts index de1a53e49..c73a5837c 100644 --- a/gitnexus-cli/src/core/ingestion/structure-processor.ts +++ b/gitnexus-web/src/core/ingestion/structure-processor.ts @@ -1,5 +1,5 @@ -import { generateId } from "../../lib/utils.js"; -import { KnowledgeGraph, GraphNode, GraphRelationship } from "../graph/types.js"; +import { generateId } from "@/lib/utils"; +import { KnowledgeGraph, GraphNode, GraphRelationship } from "../graph/types"; export const processStructure = ( graph: KnowledgeGraph, paths: string[])=>{ paths.forEach( path => { diff --git a/gitnexus-cli/src/core/ingestion/symbol-table.ts b/gitnexus-web/src/core/ingestion/symbol-table.ts similarity index 100% rename from gitnexus-cli/src/core/ingestion/symbol-table.ts rename to gitnexus-web/src/core/ingestion/symbol-table.ts diff --git a/gitnexus-cli/src/core/ingestion/tree-sitter-queries.ts b/gitnexus-web/src/core/ingestion/tree-sitter-queries.ts similarity index 99% rename from gitnexus-cli/src/core/ingestion/tree-sitter-queries.ts rename to gitnexus-web/src/core/ingestion/tree-sitter-queries.ts index f8bcd7add..a931b4a40 100644 --- a/gitnexus-cli/src/core/ingestion/tree-sitter-queries.ts +++ b/gitnexus-web/src/core/ingestion/tree-sitter-queries.ts @@ -1,4 +1,4 @@ -import { SupportedLanguages } from '../../config/supported-languages.js'; +import { SupportedLanguages } from '../../config/supported-languages'; /* * Tree-sitter queries for extracting code definitions. diff --git a/gitnexus-cli/src/core/ingestion/utils.ts b/gitnexus-web/src/core/ingestion/utils.ts similarity index 99% rename from gitnexus-cli/src/core/ingestion/utils.ts rename to gitnexus-web/src/core/ingestion/utils.ts index 5ac12a8be..959eb55dc 100644 --- a/gitnexus-cli/src/core/ingestion/utils.ts +++ b/gitnexus-web/src/core/ingestion/utils.ts @@ -1,4 +1,4 @@ -import { SupportedLanguages } from '../../config/supported-languages.js'; +import { SupportedLanguages } from '../../config/supported-languages'; /** * Map file extension to SupportedLanguage enum diff --git a/gitnexus-cli/src/core/kuzu/csv-generator.ts b/gitnexus-web/src/core/kuzu/csv-generator.ts similarity index 98% rename from gitnexus-cli/src/core/kuzu/csv-generator.ts rename to gitnexus-web/src/core/kuzu/csv-generator.ts index b23471deb..43df569cf 100644 --- a/gitnexus-cli/src/core/kuzu/csv-generator.ts +++ b/gitnexus-web/src/core/kuzu/csv-generator.ts @@ -10,8 +10,8 @@ * - All fields are consistently quoted for safety with code content */ -import { KnowledgeGraph, GraphNode, NodeLabel } from '../graph/types.js'; -import { NODE_TABLES, NodeTableName } from './schema.js'; +import { KnowledgeGraph, GraphNode, NodeLabel } from '../graph/types'; +import { NODE_TABLES, NodeTableName } from './schema'; // ============================================================================ // CSV ESCAPE UTILITIES @@ -133,14 +133,9 @@ export interface CSVData { const generateFileCSV = (nodes: GraphNode[], fileContents: Map): string => { const headers = ['id', 'name', 'filePath', 'content']; const rows: string[] = [headers.join(',')]; - const seenIds = new Set(); for (const node of nodes) { if (node.label !== 'File') continue; - // Skip duplicates - if (seenIds.has(node.id)) continue; - seenIds.add(node.id); - const content = extractContent(node, fileContents); rows.push([ escapeCSVField(node.id), diff --git a/gitnexus-web/src/core/kuzu/kuzu-adapter.ts b/gitnexus-web/src/core/kuzu/kuzu-adapter.ts new file mode 100644 index 000000000..c16e2edf3 --- /dev/null +++ b/gitnexus-web/src/core/kuzu/kuzu-adapter.ts @@ -0,0 +1,520 @@ +/** + * KuzuDB Adapter + * + * Manages the KuzuDB WASM instance for client-side graph database operations. + * Uses the "Snapshot / Bulk Load" pattern with COPY FROM for performance. + * + * Multi-table schema: separate tables for File, Function, Class, etc. + */ + +import { KnowledgeGraph } from '../graph/types'; +import { + NODE_TABLES, + REL_TABLE_NAME, + SCHEMA_QUERIES, + EMBEDDING_TABLE_NAME, + NodeTableName, +} from './schema'; +import { generateAllCSVs } from './csv-generator'; + +// Holds the reference to the dynamically loaded module +let kuzu: any = null; +let db: any = null; +let conn: any = null; + +/** + * Initialize KuzuDB WASM module and create in-memory database + */ +export const initKuzu = async () => { + if (conn) return { db, conn, kuzu }; + + try { + if (import.meta.env.DEV) console.log('๐Ÿš€ Initializing KuzuDB...'); + + // 1. Dynamic Import (Fixes the "not a function" bundler issue) + const kuzuModule = await import('kuzu-wasm'); + + // 2. Handle Vite/Webpack "default" wrapping + kuzu = kuzuModule.default || kuzuModule; + + // 3. Initialize WASM + await kuzu.init(); + + // 4. Create Database with 512MB buffer pool + const BUFFER_POOL_SIZE = 512 * 1024 * 1024; // 512MB + db = new kuzu.Database(':memory:', BUFFER_POOL_SIZE); + conn = new kuzu.Connection(db); + + if (import.meta.env.DEV) console.log('โœ… KuzuDB WASM Initialized'); + + // 5. Initialize Schema (all node tables, then rel tables, then embedding table) + for (const schemaQuery of SCHEMA_QUERIES) { + try { + await conn.query(schemaQuery); + } catch (e) { + // Schema might already exist, skip + if (import.meta.env.DEV) { + console.warn('Schema creation skipped (may already exist):', e); + } + } + } + + if (import.meta.env.DEV) console.log('โœ… KuzuDB Multi-Table Schema Created'); + + return { db, conn, kuzu }; + } catch (error) { + if (import.meta.env.DEV) console.error('โŒ KuzuDB Initialization Failed:', error); + throw error; + } +}; + +/** + * Load a KnowledgeGraph into KuzuDB using COPY FROM (bulk load) + * Uses batched CSV writes and COPY statements for optimal performance + */ +export const loadGraphToKuzu = async ( + graph: KnowledgeGraph, + fileContents: Map +) => { + const { conn, kuzu } = await initKuzu(); + + try { + if (import.meta.env.DEV) console.log(`KuzuDB: Generating CSVs for ${graph.nodeCount} nodes...`); + + // 1. Generate all CSVs (per-table) + const csvData = generateAllCSVs(graph, fileContents); + + const fs = kuzu.FS; + + // 2. Write all node CSVs to virtual filesystem + const nodeFiles: Array<{ table: NodeTableName; path: string }> = []; + for (const [tableName, csv] of csvData.nodes.entries()) { + // Skip empty CSVs (only header row) + if (csv.split('\n').length <= 1) continue; + + const path = `/${tableName.toLowerCase()}.csv`; + try { await fs.unlink(path); } catch {} + await fs.writeFile(path, csv); + nodeFiles.push({ table: tableName, path }); + } + + // 3. Parse relation CSV and prepare for INSERT (COPY FROM doesn't work with multi-pair tables) + const relLines = csvData.relCSV.split('\n').slice(1).filter(line => line.trim()); + const relCount = relLines.length; + + if (import.meta.env.DEV) { + console.log(`KuzuDB: Wrote ${nodeFiles.length} node CSVs, ${relCount} relations to insert`); + } + + // 4. COPY all node tables (must complete before rels due to FK constraints) + for (const { table, path } of nodeFiles) { + const copyQuery = getCopyQuery(table, path); + await conn.query(copyQuery); + } + + // 5. INSERT relations one by one (COPY doesn't work with multi-pair REL tables) + // Parse CSV format: "from","to","type",confidence,"reason" + let insertedRels = 0; + let skippedRels = 0; + const skippedRelStats = new Map(); + for (const line of relLines) { + try { + // Parse CSV - handle quoted fields and numeric confidence + // Parse CSV - handle quoted fields and numeric confidence + // Format: "from","to","type",confidence,"reason",step + // Note: step is unquoted numeric + const match = line.match(/"([^"]*)","([^"]*)","([^"]*)",([0-9.]+),"([^"]*)",([0-9-]+)/); + if (!match) continue; + + const [, fromId, toId, relType, confidenceStr, reason, stepStr] = match; + const confidence = parseFloat(confidenceStr) || 1.0; + const step = parseInt(stepStr) || 0; + + // Extract labels from node IDs + // Community nodes have IDs like "comm_14" (no colon) + // Other nodes have IDs like "Label:path:name" + const getNodeLabel = (nodeId: string): string => { + if (nodeId.startsWith('comm_')) { + return 'Community'; + } + if (nodeId.startsWith('proc_')) { + return 'Process'; + } + return nodeId.split(':')[0]; + }; + + // Reserved Cypher keywords need backtick escaping + const RESERVED_LABELS = ['Macro', 'Enum', 'Union', 'Const', 'Module', 'Struct']; + const escapeLabel = (label: string): string => { + return RESERVED_LABELS.includes(label) ? `\`${label}\`` : label; + }; + + const fromLabel = escapeLabel(getNodeLabel(fromId)); + const toLabel = escapeLabel(getNodeLabel(toId)); + + // INSERT with explicit node matching (including confidence and reason) + const insertQuery = ` + MATCH (a:${fromLabel} {id: '${fromId.replace(/'/g, "''")}'}), + (b:${toLabel} {id: '${toId.replace(/'/g, "''")}'}) + CREATE (a)-[:${REL_TABLE_NAME} {type: '${relType}', confidence: ${confidence}, reason: '${reason.replace(/'/g, "''")}', step: ${step}}]->(b) + `; + await conn.query(insertQuery); + insertedRels++; + } catch (err) { + // Skip failed insertions (nodes might not exist, or relation pair not allowed by schema) + skippedRels++; + const match = line.match(/"([^"]*)","([^"]*)","([^"]*)",([0-9.]+),"([^"]*)"/); + if (match) { + const [, fromId, toId, relType] = match; + const getNodeLabel = (nodeId: string): string => { + if (nodeId.startsWith('comm_')) return 'Community'; + if (nodeId.startsWith('proc_')) return 'Process'; + return nodeId.split(':')[0]; + }; + const fromLabel = getNodeLabel(fromId); + const toLabel = getNodeLabel(toId); + const key = `${relType}:${fromLabel}->` + toLabel; + skippedRelStats.set(key, (skippedRelStats.get(key) || 0) + 1); + + // Log each skipped relation + if (import.meta.env.DEV) { + console.warn(`โš ๏ธ Skipped: ${key} | "${fromId}" โ†’ "${toId}" | ${err instanceof Error ? err.message : String(err)}`); + } + } + } + } + + if (import.meta.env.DEV) { + console.log(`KuzuDB: Inserted ${insertedRels}/${relCount} relations`); + if (skippedRels > 0) { + const topSkipped = Array.from(skippedRelStats.entries()) + .sort((a, b) => b[1] - a[1]) + .slice(0, 10); + console.warn(`KuzuDB: Skipped ${skippedRels}/${relCount} relations (top by kind/pair):`, topSkipped); + } + } + + // 6. Verify results + let totalNodes = 0; + for (const tableName of NODE_TABLES) { + try { + const countRes = await conn.query(`MATCH (n:${tableName}) RETURN count(n) AS cnt`); + const countRow = await countRes.getNext(); + const count = countRow ? (countRow.cnt ?? countRow[0] ?? 0) : 0; + totalNodes += Number(count); + } catch { + // Table might be empty, skip + } + } + + if (import.meta.env.DEV) console.log(`โœ… KuzuDB Bulk Load Complete. Total nodes: ${totalNodes}, edges: ${insertedRels}`); + + // 7. Cleanup CSV files + for (const { path } of nodeFiles) { + try { await fs.unlink(path); } catch {} + } + + return { success: true, count: totalNodes }; + + } catch (error) { + if (import.meta.env.DEV) console.error('โŒ KuzuDB Bulk Load Failed:', error); + return { success: false, count: 0 }; + } +}; + +/** + * Get the COPY query for a node table with correct column mapping + */ +const getCopyQuery = (table: NodeTableName, path: string): string => { + // File and Folder have different columns than code elements + if (table === 'File') { + return `COPY File(id, name, filePath, content) FROM "${path}" (HEADER=true, PARALLEL=false)`; + } + if (table === 'Folder') { + return `COPY Folder(id, name, filePath) FROM "${path}" (HEADER=true, PARALLEL=false)`; + } + if (table === 'Community') { + return `COPY Community(id, label, heuristicLabel, keywords, description, enrichedBy, cohesion, symbolCount) FROM "${path}" (HEADER=true, PARALLEL=false)`; + } + if (table === 'Process') { + return `COPY Process(id, label, heuristicLabel, processType, stepCount, communities, entryPointId, terminalId) FROM "${path}" (HEADER=true, PARALLEL=false)`; + } + // All code element tables: Function, Class, Interface, Method, CodeElement + return `COPY ${table}(id, name, filePath, startLine, endLine, content) FROM "${path}" (HEADER=true, PARALLEL=false)`; +}; + +/** + * Execute a Cypher query against the database + * Returns results as named objects (not tuples) for better usability + */ +export const executeQuery = async (cypher: string): Promise => { + if (!conn) { + await initKuzu(); + } + + try { + const result = await conn.query(cypher); + + // Extract column names from RETURN clause + const returnMatch = cypher.match(/RETURN\s+(.+?)(?:\s+ORDER|\s+LIMIT|\s+SKIP|\s*$)/is); + let columnNames: string[] = []; + if (returnMatch) { + // Parse RETURN clause to get column names/aliases + // Handles: "a.name, b.filePath AS path, count(x) AS cnt" + const returnClause = returnMatch[1]; + columnNames = returnClause.split(',').map(col => { + col = col.trim(); + // Check for AS alias + const asMatch = col.match(/\s+AS\s+(\w+)\s*$/i); + if (asMatch) return asMatch[1]; + // Check for property access like n.name + const propMatch = col.match(/\.(\w+)\s*$/); + if (propMatch) return propMatch[1]; + // Check for function call like count(x) + const funcMatch = col.match(/^(\w+)\s*\(/); + if (funcMatch) return funcMatch[1]; + // Just use as-is if simple identifier + return col.replace(/[^a-zA-Z0-9_]/g, '_'); + }); + } + + // Collect all rows + const rows: any[] = []; + while (await result.hasNext()) { + const row = await result.getNext(); + + // Convert tuple to named object if we have column names and row is array + if (Array.isArray(row) && columnNames.length === row.length) { + const namedRow: Record = {}; + for (let i = 0; i < row.length; i++) { + namedRow[columnNames[i]] = row[i]; + } + rows.push(namedRow); + } else { + // Already an object or column count doesn't match + rows.push(row); + } + } + + return rows; + } catch (error) { + if (import.meta.env.DEV) console.error('Query execution failed:', error); + throw error; + } +}; + +/** + * Get database statistics + */ +export const getKuzuStats = async (): Promise<{ nodes: number; edges: number }> => { + if (!conn) { + return { nodes: 0, edges: 0 }; + } + + try { + // Count nodes across all tables + let totalNodes = 0; + for (const tableName of NODE_TABLES) { + try { + const nodeResult = await conn.query(`MATCH (n:${tableName}) RETURN count(n) AS cnt`); + const nodeRow = await nodeResult.getNext(); + totalNodes += Number(nodeRow?.cnt ?? nodeRow?.[0] ?? 0); + } catch { + // Table might not exist or be empty + } + } + + // Count edges from single relation table + let totalEdges = 0; + try { + const edgeResult = await conn.query(`MATCH ()-[r:${REL_TABLE_NAME}]->() RETURN count(r) AS cnt`); + const edgeRow = await edgeResult.getNext(); + totalEdges = Number(edgeRow?.cnt ?? edgeRow?.[0] ?? 0); + } catch { + // Table might not exist or be empty + } + + return { nodes: totalNodes, edges: totalEdges }; + } catch (error) { + if (import.meta.env.DEV) { + console.warn('Failed to get Kuzu stats:', error); + } + return { nodes: 0, edges: 0 }; + } +}; + +/** + * Check if KuzuDB is initialized and has data + */ +export const isKuzuReady = (): boolean => { + return conn !== null && db !== null; +}; + +/** + * Close the database connection (cleanup) + */ +export const closeKuzu = async (): Promise => { + if (conn) { + try { + await conn.close(); + } catch {} + conn = null; + } + if (db) { + try { + await db.close(); + } catch {} + db = null; + } + kuzu = null; +}; + +/** + * Execute a prepared statement with parameters + * @param cypher - Cypher query with $param placeholders + * @param params - Object mapping param names to values + * @returns Query results + */ +export const executePrepared = async ( + cypher: string, + params: Record +): Promise => { + if (!conn) { + await initKuzu(); + } + + try { + const stmt = await conn.prepare(cypher); + if (!stmt.isSuccess()) { + const errMsg = await stmt.getErrorMessage(); + throw new Error(`Prepare failed: ${errMsg}`); + } + + const result = await conn.execute(stmt, params); + + const rows: any[] = []; + while (await result.hasNext()) { + const row = await result.getNext(); + rows.push(row); + } + + await stmt.close(); + return rows; + } catch (error) { + if (import.meta.env.DEV) console.error('Prepared query failed:', error); + throw error; + } +}; + +/** + * Execute a prepared statement with multiple parameter sets in small sub-batches + */ +export const executeWithReusedStatement = async ( + cypher: string, + paramsList: Array> +): Promise => { + if (!conn) { + await initKuzu(); + } + + if (paramsList.length === 0) return; + + const SUB_BATCH_SIZE = 4; + + for (let i = 0; i < paramsList.length; i += SUB_BATCH_SIZE) { + const subBatch = paramsList.slice(i, i + SUB_BATCH_SIZE); + + const stmt = await conn.prepare(cypher); + if (!stmt.isSuccess()) { + const errMsg = await stmt.getErrorMessage(); + throw new Error(`Prepare failed: ${errMsg}`); + } + + try { + for (const params of subBatch) { + await conn.execute(stmt, params); + } + } finally { + await stmt.close(); + } + + if (i + SUB_BATCH_SIZE < paramsList.length) { + await new Promise(r => setTimeout(r, 0)); + } + } +}; + +/** + * Test if array parameters work with prepared statements + */ +export const testArrayParams = async (): Promise<{ success: boolean; error?: string }> => { + if (!conn) { + await initKuzu(); + } + + try { + const testEmbedding = new Array(384).fill(0).map((_, i) => i / 384); + + // Get any node ID to test with (try File first, then others) + let testNodeId: string | null = null; + for (const tableName of NODE_TABLES) { + try { + const nodeResult = await conn.query(`MATCH (n:${tableName}) RETURN n.id AS id LIMIT 1`); + const nodeRow = await nodeResult.getNext(); + if (nodeRow) { + testNodeId = nodeRow.id ?? nodeRow[0]; + break; + } + } catch {} + } + + if (!testNodeId) { + return { success: false, error: 'No nodes found to test with' }; + } + + if (import.meta.env.DEV) { + console.log('๐Ÿงช Testing array params with node:', testNodeId); + } + + // First create an embedding entry + const createQuery = `CREATE (e:${EMBEDDING_TABLE_NAME} {nodeId: $nodeId, embedding: $embedding})`; + const stmt = await conn.prepare(createQuery); + + if (!stmt.isSuccess()) { + const errMsg = await stmt.getErrorMessage(); + return { success: false, error: `Prepare failed: ${errMsg}` }; + } + + await conn.execute(stmt, { + nodeId: testNodeId, + embedding: testEmbedding, + }); + + await stmt.close(); + + // Verify it was stored + const verifyResult = await conn.query( + `MATCH (e:${EMBEDDING_TABLE_NAME} {nodeId: '${testNodeId}'}) RETURN e.embedding AS emb` + ); + const verifyRow = await verifyResult.getNext(); + const storedEmb = verifyRow?.emb ?? verifyRow?.[0]; + + if (storedEmb && Array.isArray(storedEmb) && storedEmb.length === 384) { + if (import.meta.env.DEV) { + console.log('โœ… Array params WORK! Stored embedding length:', storedEmb.length); + } + return { success: true }; + } else { + return { + success: false, + error: `Embedding not stored correctly. Got: ${typeof storedEmb}, length: ${storedEmb?.length}` + }; + } + } catch (error) { + const errorMsg = error instanceof Error ? error.message : String(error); + if (import.meta.env.DEV) { + console.error('โŒ Array params test failed:', errorMsg); + } + return { success: false, error: errorMsg }; + } +}; diff --git a/gitnexus-cli/src/core/kuzu/schema.ts b/gitnexus-web/src/core/kuzu/schema.ts similarity index 100% rename from gitnexus-cli/src/core/kuzu/schema.ts rename to gitnexus-web/src/core/kuzu/schema.ts diff --git a/gitnexus/src/core/llm/agent.ts b/gitnexus-web/src/core/llm/agent.ts similarity index 100% rename from gitnexus/src/core/llm/agent.ts rename to gitnexus-web/src/core/llm/agent.ts diff --git a/gitnexus/src/core/llm/context-builder.ts b/gitnexus-web/src/core/llm/context-builder.ts similarity index 100% rename from gitnexus/src/core/llm/context-builder.ts rename to gitnexus-web/src/core/llm/context-builder.ts diff --git a/gitnexus/src/core/llm/index.ts b/gitnexus-web/src/core/llm/index.ts similarity index 100% rename from gitnexus/src/core/llm/index.ts rename to gitnexus-web/src/core/llm/index.ts diff --git a/gitnexus/src/core/llm/settings-service.ts b/gitnexus-web/src/core/llm/settings-service.ts similarity index 100% rename from gitnexus/src/core/llm/settings-service.ts rename to gitnexus-web/src/core/llm/settings-service.ts diff --git a/gitnexus/src/core/llm/tools.ts b/gitnexus-web/src/core/llm/tools.ts similarity index 100% rename from gitnexus/src/core/llm/tools.ts rename to gitnexus-web/src/core/llm/tools.ts diff --git a/gitnexus/src/core/llm/types.ts b/gitnexus-web/src/core/llm/types.ts similarity index 100% rename from gitnexus/src/core/llm/types.ts rename to gitnexus-web/src/core/llm/types.ts diff --git a/gitnexus/src/core/mcp/mcp-client.ts b/gitnexus-web/src/core/mcp/mcp-client.ts similarity index 100% rename from gitnexus/src/core/mcp/mcp-client.ts rename to gitnexus-web/src/core/mcp/mcp-client.ts diff --git a/gitnexus-cli/src/core/search/bm25-index.ts b/gitnexus-web/src/core/search/bm25-index.ts similarity index 76% rename from gitnexus-cli/src/core/search/bm25-index.ts rename to gitnexus-web/src/core/search/bm25-index.ts index 5a64f3c12..4b745bd72 100644 --- a/gitnexus-cli/src/core/search/bm25-index.ts +++ b/gitnexus-web/src/core/search/bm25-index.ts @@ -6,7 +6,6 @@ */ import MiniSearch from 'minisearch'; -import fs from 'fs/promises'; export interface BM25Document { id: string; // File path @@ -83,8 +82,7 @@ export const buildBM25Index = (fileContents: Map): number => { searchIndex.addAll(documents); indexedDocCount = documents.length; - const isDev = process.env.NODE_ENV !== 'production'; - if (isDev) { + if (import.meta.env.DEV) { console.log(`๐Ÿ“š BM25 index built: ${indexedDocCount} documents`); } @@ -147,46 +145,6 @@ export const clearBM25Index = (): void => { indexedDocCount = 0; }; -/** - * Export the BM25 index to disk - */ -export const exportBM25Index = async (filePath: string): Promise => { - if (!searchIndex) return; - const json = JSON.stringify(searchIndex.toJSON()); - await fs.writeFile(filePath, json, 'utf-8'); -}; - -/** - * Load a BM25 index from disk - */ -export const loadBM25Index = async (filePath: string): Promise => { - try { - const json = await fs.readFile(filePath, 'utf-8'); - const data = JSON.parse(json); - searchIndex = MiniSearch.loadJSON(data, { - fields: ['content', 'name'], - storeFields: ['id'], - tokenize: (text: string) => { - const tokens = text.toLowerCase().split(/[\s\-_./\\(){}[\]<>:;,!?'"]+/); - const expanded: string[] = []; - for (const token of tokens) { - if (token.length === 0) continue; - const camelParts = token.replace(/([a-z])([A-Z])/g, '$1 $2').toLowerCase().split(' '); - expanded.push(...camelParts); - if (camelParts.length > 1) { - expanded.push(token); - } - } - return expanded.filter(t => t.length > 1 && !STOP_WORDS.has(t)); - }, - }); - indexedDocCount = searchIndex.documentCount; - return true; - } catch { - return false; - } -}; - /** * Common stop words to filter out (too common to be useful) */ diff --git a/gitnexus-cli/src/core/search/hybrid-search.ts b/gitnexus-web/src/core/search/hybrid-search.ts similarity index 84% rename from gitnexus-cli/src/core/search/hybrid-search.ts rename to gitnexus-web/src/core/search/hybrid-search.ts index 4af6f3700..247bb2783 100644 --- a/gitnexus-cli/src/core/search/hybrid-search.ts +++ b/gitnexus-web/src/core/search/hybrid-search.ts @@ -8,8 +8,8 @@ * production search systems. */ -import { searchBM25, isBM25Ready, type BM25SearchResult } from './bm25-index.js'; -import type { SemanticSearchResult } from '../embeddings/types.js'; +import { searchBM25, isBM25Ready, type BM25SearchResult } from './bm25-index'; +import type { SemanticSearchResult } from '../embeddings/types'; /** * RRF constant - standard value used in the literature @@ -144,21 +144,6 @@ export const formatHybridResults = (results: HybridSearchResult[]): string => { return `Found ${results.length} results:\n\n${formatted.join('\n\n')}`; }; -/** - * Execute BM25 + semantic search and merge with RRF. - * The semanticSearch function is injected to keep this module environment-agnostic. - */ -export const hybridSearch = async ( - query: string, - limit: number, - executeQuery: (cypher: string) => Promise, - semanticSearch: (executeQuery: (cypher: string) => Promise, query: string, k?: number) => Promise -): Promise => { - const bm25Results = isBM25Ready() ? searchBM25(query, limit) : []; - const semanticResults = await semanticSearch(executeQuery, query, limit); - return mergeWithRRF(bm25Results, semanticResults, limit); -}; - diff --git a/gitnexus/src/core/search/index.ts b/gitnexus-web/src/core/search/index.ts similarity index 100% rename from gitnexus/src/core/search/index.ts rename to gitnexus-web/src/core/search/index.ts diff --git a/gitnexus-web/src/core/tree-sitter/parser-loader.ts b/gitnexus-web/src/core/tree-sitter/parser-loader.ts new file mode 100644 index 000000000..d5224ca4e --- /dev/null +++ b/gitnexus-web/src/core/tree-sitter/parser-loader.ts @@ -0,0 +1,72 @@ +import Parser from 'web-tree-sitter'; +import { SupportedLanguages } from '../../config/supported-languages'; + +let parser: Parser | null = null; + +// Cache the compiled Language objects to avoid fetching/compiling twice +const languageCache = new Map(); + +export const loadParser = async (): Promise => { + if (parser) return parser; + + await Parser.init({ + locateFile: (scriptName: string) => { + return `/wasm/${scriptName}`; + } + }) + + parser = new Parser(); + return parser; +} + +// Get the appropriate WASM file based on language and file extension +const getWasmPath = (language: SupportedLanguages, filePath?: string): string => { + // For TypeScript, check if it's a TSX file + if (language === SupportedLanguages.TypeScript) { + if (filePath?.endsWith('.tsx')) { + return '/wasm/typescript/tree-sitter-tsx.wasm'; + } + return '/wasm/typescript/tree-sitter-typescript.wasm'; + } + + const languageFileMap: Record = { + [SupportedLanguages.JavaScript]: '/wasm/javascript/tree-sitter-javascript.wasm', + [SupportedLanguages.TypeScript]: '/wasm/typescript/tree-sitter-typescript.wasm', + [SupportedLanguages.Python]: '/wasm/python/tree-sitter-python.wasm', + [SupportedLanguages.Java]: '/wasm/java/tree-sitter-java.wasm', + [SupportedLanguages.C]: '/wasm/c/tree-sitter-c.wasm', + [SupportedLanguages.CPlusPlus]: '/wasm/cpp/tree-sitter-cpp.wasm', + [SupportedLanguages.CSharp]: '/wasm/csharp/tree-sitter-csharp.wasm', + [SupportedLanguages.Go]: '/wasm/go/tree-sitter-go.wasm', + [SupportedLanguages.Rust]: '/wasm/rust/tree-sitter-rust.wasm', + }; + + return languageFileMap[language]; +}; + +export const loadLanguage = async (language: SupportedLanguages, filePath?: string): Promise => { + if (!parser) await loadParser(); + const wasmPath = getWasmPath(language, filePath); + + if (languageCache.has(wasmPath)) { + parser!.setLanguage(languageCache.get(wasmPath)!); + return; + } + + if (!wasmPath) { + console.error(`โŒ [Parser] No WASM path configured for language: ${language}`); + throw new Error(`Unsupported language: ${language}`); + } + + try { + const loadedLanguage = await Parser.Language.load(wasmPath); + languageCache.set(wasmPath, loadedLanguage); + parser!.setLanguage(loadedLanguage); + } catch (error: unknown) { + const errorMessage = error instanceof Error ? error.message : String(error); + console.error(`โŒ [Parser] Failed to load WASM grammar for ${language}`); + console.error(` WASM Path: ${wasmPath}`); + console.error(` Error: ${errorMessage}`); + throw new Error(`Failed to load grammar for ${language}: ${errorMessage}`); + } +} diff --git a/gitnexus/src/hooks/useAppState.tsx b/gitnexus-web/src/hooks/useAppState.tsx similarity index 100% rename from gitnexus/src/hooks/useAppState.tsx rename to gitnexus-web/src/hooks/useAppState.tsx diff --git a/gitnexus/src/hooks/useSettings.ts b/gitnexus-web/src/hooks/useSettings.ts similarity index 100% rename from gitnexus/src/hooks/useSettings.ts rename to gitnexus-web/src/hooks/useSettings.ts diff --git a/gitnexus/src/hooks/useSigma.ts b/gitnexus-web/src/hooks/useSigma.ts similarity index 100% rename from gitnexus/src/hooks/useSigma.ts rename to gitnexus-web/src/hooks/useSigma.ts diff --git a/gitnexus/src/index.css b/gitnexus-web/src/index.css similarity index 100% rename from gitnexus/src/index.css rename to gitnexus-web/src/index.css diff --git a/gitnexus/src/lib/constants.ts b/gitnexus-web/src/lib/constants.ts similarity index 100% rename from gitnexus/src/lib/constants.ts rename to gitnexus-web/src/lib/constants.ts diff --git a/gitnexus/src/lib/graph-adapter.ts b/gitnexus-web/src/lib/graph-adapter.ts similarity index 100% rename from gitnexus/src/lib/graph-adapter.ts rename to gitnexus-web/src/lib/graph-adapter.ts diff --git a/gitnexus/src/lib/mermaid-generator.ts b/gitnexus-web/src/lib/mermaid-generator.ts similarity index 100% rename from gitnexus/src/lib/mermaid-generator.ts rename to gitnexus-web/src/lib/mermaid-generator.ts diff --git a/gitnexus-cli/src/lib/utils.ts b/gitnexus-web/src/lib/utils.ts similarity index 100% rename from gitnexus-cli/src/lib/utils.ts rename to gitnexus-web/src/lib/utils.ts diff --git a/gitnexus/src/main.tsx b/gitnexus-web/src/main.tsx similarity index 100% rename from gitnexus/src/main.tsx rename to gitnexus-web/src/main.tsx diff --git a/gitnexus/src/repomix-output.md b/gitnexus-web/src/repomix-output.md similarity index 100% rename from gitnexus/src/repomix-output.md rename to gitnexus-web/src/repomix-output.md diff --git a/gitnexus/src/services/git-clone.ts b/gitnexus-web/src/services/git-clone.ts similarity index 100% rename from gitnexus/src/services/git-clone.ts rename to gitnexus-web/src/services/git-clone.ts diff --git a/gitnexus/src/services/zip.ts b/gitnexus-web/src/services/zip.ts similarity index 100% rename from gitnexus/src/services/zip.ts rename to gitnexus-web/src/services/zip.ts diff --git a/gitnexus/src/types/kuzu-wasm.d.ts b/gitnexus-web/src/types/kuzu-wasm.d.ts similarity index 100% rename from gitnexus/src/types/kuzu-wasm.d.ts rename to gitnexus-web/src/types/kuzu-wasm.d.ts diff --git a/gitnexus-cli/src/types/pipeline.ts b/gitnexus-web/src/types/pipeline.ts similarity index 96% rename from gitnexus-cli/src/types/pipeline.ts rename to gitnexus-web/src/types/pipeline.ts index c8848d562..123be720b 100644 --- a/gitnexus-cli/src/types/pipeline.ts +++ b/gitnexus-web/src/types/pipeline.ts @@ -1,6 +1,6 @@ -import { GraphNode, GraphRelationship, KnowledgeGraph } from '../core/graph/types.js'; -import { CommunityDetectionResult } from '../core/ingestion/community-processor.js'; -import { ProcessDetectionResult } from '../core/ingestion/process-processor.js'; +import { GraphNode, GraphRelationship, KnowledgeGraph } from '../core/graph/types'; +import { CommunityDetectionResult } from '../core/ingestion/community-processor'; +import { ProcessDetectionResult } from '../core/ingestion/process-processor'; export type PipelinePhase = 'idle' | 'extracting' | 'structure' | 'parsing' | 'imports' | 'calls' | 'heritage' | 'communities' | 'processes' | 'enriching' | 'complete' | 'error'; diff --git a/gitnexus/src/vite-env.d.ts b/gitnexus-web/src/vite-env.d.ts similarity index 100% rename from gitnexus/src/vite-env.d.ts rename to gitnexus-web/src/vite-env.d.ts diff --git a/gitnexus/src/workers/ingestion.worker.ts b/gitnexus-web/src/workers/ingestion.worker.ts similarity index 100% rename from gitnexus/src/workers/ingestion.worker.ts rename to gitnexus-web/src/workers/ingestion.worker.ts diff --git a/gitnexus/tsconfig.app.json b/gitnexus-web/tsconfig.app.json similarity index 100% rename from gitnexus/tsconfig.app.json rename to gitnexus-web/tsconfig.app.json diff --git a/gitnexus-web/tsconfig.json b/gitnexus-web/tsconfig.json new file mode 100644 index 000000000..1ffef600d --- /dev/null +++ b/gitnexus-web/tsconfig.json @@ -0,0 +1,7 @@ +{ + "files": [], + "references": [ + { "path": "./tsconfig.app.json" }, + { "path": "./tsconfig.node.json" } + ] +} diff --git a/gitnexus/tsconfig.node.json b/gitnexus-web/tsconfig.node.json similarity index 100% rename from gitnexus/tsconfig.node.json rename to gitnexus-web/tsconfig.node.json diff --git a/gitnexus/vercel.json b/gitnexus-web/vercel.json similarity index 100% rename from gitnexus/vercel.json rename to gitnexus-web/vercel.json diff --git a/gitnexus/vite.config.ts b/gitnexus-web/vite.config.ts similarity index 100% rename from gitnexus/vite.config.ts rename to gitnexus-web/vite.config.ts diff --git a/gitnexus/package-lock.json b/gitnexus/package-lock.json index cf591cb30..38102fa8a 100644 --- a/gitnexus/package-lock.json +++ b/gitnexus/package-lock.json @@ -1,568 +1,53 @@ { "name": "gitnexus", - "version": "0.0.0", + "version": "0.1.0", "lockfileVersion": 3, "requires": true, "packages": { "": { "name": "gitnexus", - "version": "0.0.0", + "version": "0.1.0", + "license": "MIT", "dependencies": { "@huggingface/transformers": "^3.0.0", - "@isomorphic-git/lightning-fs": "^4.6.2", - "@langchain/anthropic": "^1.3.10", - "@langchain/core": "^1.1.15", - "@langchain/google-genai": "^2.1.10", - "@langchain/langgraph": "^1.1.0", - "@langchain/ollama": "^1.2.0", - "@langchain/openai": "^1.2.2", - "@sigma/edge-curve": "^3.1.0", - "@tailwindcss/vite": "^4.1.18", - "axios": "^1.13.2", - "buffer": "^6.0.3", - "comlink": "^4.4.2", - "d3": "^7.9.0", - "graphology": "^0.26.0", - "graphology-communities-louvain": "^2.0.2", - "graphology-layout-force": "^0.2.4", - "graphology-layout-forceatlas2": "^0.10.1", - "graphology-layout-noverlap": "^0.4.2", - "isomorphic-git": "^1.36.1", - "jszip": "^3.10.1", - "kuzu-wasm": "^0.11.1", - "langchain": "^1.2.10", - "lru-cache": "^11.2.4", - "lucide-react": "^0.562.0", - "mermaid": "^11.12.2", + "@modelcontextprotocol/sdk": "^1.0.0", + "commander": "^12.0.0", + "cors": "^2.8.5", + "express": "^4.19.2", + "glob": "^11.0.0", + "graphology": "^0.25.4", + "graphology-communities-louvain": "^2.0.1", + "kuzu": "^0.11.3", + "lru-cache": "^11.0.0", "minisearch": "^7.2.0", - "react": "^18.3.1", - "react-dom": "^18.3.1", - "react-markdown": "^10.1.0", - "react-syntax-highlighter": "^16.1.0", - "react-zoom-pan-pinch": "^3.7.0", - "remark-gfm": "^4.0.1", - "sigma": "^3.0.2", - "tailwindcss": "^4.1.18", + "ora": "^8.0.0", + "tree-sitter": "^0.21.0", + "tree-sitter-c": "^0.21.0", + "tree-sitter-c-sharp": "^0.21.0", + "tree-sitter-cpp": "^0.22.0", + "tree-sitter-go": "^0.21.0", + "tree-sitter-java": "^0.20.0", + "tree-sitter-javascript": "^0.21.0", + "tree-sitter-python": "^0.21.0", + "tree-sitter-rust": "^0.21.0", + "tree-sitter-typescript": "^0.21.0", "uuid": "^13.0.0", - "vite-plugin-top-level-await": "^1.6.0", - "vite-plugin-wasm": "^3.5.0", - "web-tree-sitter": "^0.20.8", - "zod": "^3.25.76" + "ws": "^8.16.0" + }, + "bin": { + "gitnexus": "dist/cli/index.js" }, 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index 20ee8b00b..968a6ff62 100644 --- a/gitnexus/package.json +++ b/gitnexus/package.json @@ -1,67 +1,54 @@ { "name": "gitnexus", - "private": true, - "version": "0.0.0", + "version": "0.1.0", + "description": "GitNexus local CLI and MCP server", + "author": "Abhigyan Patwari", + "license": "PolyForm-Noncommercial-1.0.0", "type": "module", + "bin": { + "gitnexus": "./dist/cli/index.js" + }, + "files": [ + "dist" + ], "scripts": { - "dev": "vite", - "build": "tsc -b && vite build", - "preview": "vite preview" + "build": "tsc", + "dev": "tsx watch src/cli/index.ts" }, "dependencies": { "@huggingface/transformers": "^3.0.0", - "@isomorphic-git/lightning-fs": "^4.6.2", - "@langchain/anthropic": "^1.3.10", - "@langchain/core": "^1.1.15", - "@langchain/google-genai": "^2.1.10", - "@langchain/langgraph": "^1.1.0", - "@langchain/ollama": "^1.2.0", - "@langchain/openai": "^1.2.2", - "@sigma/edge-curve": "^3.1.0", - "@tailwindcss/vite": "^4.1.18", - "axios": "^1.13.2", - "buffer": "^6.0.3", - 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"typescript": "^5.4.5" + }, + "engines": { + "node": ">=18.0.0" } -} +} \ No newline at end of file diff --git a/gitnexus-cli/src/cli/analyze.ts b/gitnexus/src/cli/analyze.ts similarity index 100% rename from gitnexus-cli/src/cli/analyze.ts rename to gitnexus/src/cli/analyze.ts diff --git a/gitnexus-cli/src/cli/clean.ts b/gitnexus/src/cli/clean.ts similarity index 100% rename from gitnexus-cli/src/cli/clean.ts rename to gitnexus/src/cli/clean.ts diff --git a/gitnexus-cli/src/cli/index.ts b/gitnexus/src/cli/index.ts similarity index 100% rename from gitnexus-cli/src/cli/index.ts rename to gitnexus/src/cli/index.ts diff --git a/gitnexus-cli/src/cli/list.ts b/gitnexus/src/cli/list.ts similarity index 100% rename from gitnexus-cli/src/cli/list.ts rename to gitnexus/src/cli/list.ts diff --git a/gitnexus/src/cli/mcp.ts b/gitnexus/src/cli/mcp.ts new file mode 100644 index 000000000..43d7458dc --- /dev/null +++ b/gitnexus/src/cli/mcp.ts @@ -0,0 +1,94 @@ +/** + * MCP Command + * + * Starts the MCP server in standalone mode using local .gitnexus/ index. + * Auto-detects repository by searching for .gitnexus/ folder. + */ + +import path from 'path'; +import fs from 'fs/promises'; +import { startMCPServer } from '../mcp/server.js'; +import { LocalBackend, findRepo } from '../mcp/local/local-backend.js'; + +/** + * Get candidate paths to search for .gitnexus/ folder + */ +function getCandidatePaths(): string[] { + const candidates: string[] = []; + + // 1. Explicit override (highest priority) + if (process.env.GITNEXUS_CWD) { + candidates.push(process.env.GITNEXUS_CWD); + } + + // 2. Current working directory + candidates.push(process.cwd()); + + // 3. VS Code workspace folders (if available via env) + if (process.env.VSCODE_WORKSPACE_FOLDER) { + candidates.push(process.env.VSCODE_WORKSPACE_FOLDER); + } + + // Deduplicate while preserving order + return [...new Set(candidates.map(p => path.resolve(p)))]; +} + +/** + * Find a git repository root by walking up the directory tree + */ +async function findGitRoot(startPath: string): Promise { + let current = path.resolve(startPath); + const root = path.parse(current).root; + + while (current !== root) { + try { + const gitPath = path.join(current, '.git'); + const stat = await fs.stat(gitPath); + if (stat.isDirectory()) return current; + } catch {} + current = path.dirname(current); + } + return null; +} + +export const mcpCommand = async () => { + // Try multiple candidate paths to find .gitnexus/ + const candidates = getCandidatePaths(); + + for (const candidate of candidates) { + const repo = await findRepo(candidate); + if (repo) { + const local = new LocalBackend(); + await local.init(candidate); + console.error(`GitNexus: Found index at ${repo.storagePath}`); + await startMCPServer(local); + return; + } + } + + // No index found - give helpful error message + for (const candidate of candidates) { + const gitRoot = await findGitRoot(candidate); + if (gitRoot) { + console.error(''); + console.error('โ•”โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•—'); + console.error('โ•‘ GitNexus: Repository Not Indexed โ•‘'); + console.error('โ• โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•ฃ'); + console.error(`โ•‘ Found git repo: ${gitRoot.slice(0, 35).padEnd(35)} โ•‘`); + console.error('โ•‘ โ•‘'); + console.error('โ•‘ To enable AI code understanding, run: โ•‘'); + console.error('โ•‘ โ•‘'); + console.error('โ•‘ npx gitnexus analyze โ•‘'); + console.error('โ•‘ โ•‘'); + console.error('โ•‘ Then restart your IDE. โ•‘'); + console.error('โ•šโ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•โ•'); + console.error(''); + process.exit(1); + } + } + + // No git repo found + console.error('GitNexus: No git repository found.'); + console.error(`Searched: ${candidates.join(', ')}`); + process.exit(1); +}; diff --git a/gitnexus-cli/src/cli/serve.ts b/gitnexus/src/cli/serve.ts similarity index 100% rename from gitnexus-cli/src/cli/serve.ts rename to gitnexus/src/cli/serve.ts diff --git a/gitnexus-cli/src/cli/status.ts b/gitnexus/src/cli/status.ts similarity index 100% rename from gitnexus-cli/src/cli/status.ts rename to gitnexus/src/cli/status.ts diff --git a/gitnexus/src/core/embeddings/embedder.ts b/gitnexus/src/core/embeddings/embedder.ts index 118894583..f0cdcde45 100644 --- a/gitnexus/src/core/embeddings/embedder.ts +++ b/gitnexus/src/core/embeddings/embedder.ts @@ -8,59 +8,23 @@ */ import { pipeline, env, type FeatureExtractionPipeline } from '@huggingface/transformers'; -import { DEFAULT_EMBEDDING_CONFIG, type EmbeddingConfig, type ModelProgress } from './types'; +import { DEFAULT_EMBEDDING_CONFIG, type EmbeddingConfig, type ModelProgress } from './types.js'; // Module-level state for singleton pattern let embedderInstance: FeatureExtractionPipeline | null = null; let isInitializing = false; let initPromise: Promise | null = null; -let currentDevice: 'webgpu' | 'wasm' | null = null; +let currentDevice: 'webgpu' | 'cuda' | 'cpu' | 'wasm' | null = null; /** * Progress callback type for model loading */ export type ModelProgressCallback = (progress: ModelProgress) => void; -/** - * Custom error thrown when WebGPU is not available - * Allows UI to prompt user for fallback choice - */ -export class WebGPUNotAvailableError extends Error { - constructor(originalError?: Error) { - super('WebGPU not available in this browser'); - this.name = 'WebGPUNotAvailableError'; - this.cause = originalError; - } -} - -/** - * Check if WebGPU is available in this browser - * Quick check without loading the model - */ -export const checkWebGPUAvailability = async (): Promise => { - try { - // Cast to any to avoid WebGPU types not being available in all TS configs - const nav = navigator as any; - if (!nav.gpu) { - return false; - } - const adapter = await nav.gpu.requestAdapter(); - if (!adapter) { - return false; - } - // Try to get a device - this is where it usually fails - const device = await adapter.requestDevice(); - device.destroy(); // Clean up - return true; - } catch { - return false; - } -}; - /** * Get the current device being used for inference */ -export const getCurrentDevice = (): 'webgpu' | 'wasm' | null => currentDevice; +export const getCurrentDevice = (): 'webgpu' | 'cuda' | 'cpu' | 'wasm' | null => currentDevice; /** * Initialize the embedding model @@ -68,14 +32,13 @@ export const getCurrentDevice = (): 'webgpu' | 'wasm' | null => currentDevice; * * @param onProgress - Optional callback for model download progress * @param config - Optional configuration override - * @param forceDevice - Force a specific device (bypasses WebGPU check) + * @param forceDevice - Force a specific device * @returns Promise resolving to the embedder pipeline - * @throws WebGPUNotAvailableError if WebGPU is requested but unavailable */ export const initEmbedder = async ( onProgress?: ModelProgressCallback, config: Partial = {}, - forceDevice?: 'webgpu' | 'wasm' + forceDevice?: 'webgpu' | 'cuda' | 'cpu' | 'wasm' ): Promise => { // Return existing instance if available if (embedderInstance) { @@ -90,14 +53,19 @@ export const initEmbedder = async ( isInitializing = true; const finalConfig = { ...DEFAULT_EMBEDDING_CONFIG, ...config }; - const requestedDevice = forceDevice || finalConfig.device; + // On Windows, use webgpu for GPU acceleration (via DirectX12/DirectML) + // CUDA is only available on Linux with onnxruntime-node + const isWindows = process.platform === 'win32'; + const gpuDevice = isWindows ? 'webgpu' : 'cuda'; + let requestedDevice = forceDevice || (finalConfig.device === 'auto' ? gpuDevice : finalConfig.device); initPromise = (async () => { try { // Configure transformers.js environment env.allowLocalModels = false; - if (import.meta.env.DEV) { + const isDev = process.env.NODE_ENV !== 'production'; + if (isDev) { console.log(`๐Ÿง  Loading embedding model: ${finalConfig.modelId}`); } @@ -112,86 +80,59 @@ export const initEmbedder = async ( onProgress(progress); } : undefined; - // If WebGPU is requested (default), check availability first - if (requestedDevice === 'webgpu') { - if (import.meta.env.DEV) { - console.log('๐Ÿ”ง Checking WebGPU availability...'); - } - - const webgpuAvailable = await checkWebGPUAvailability(); - - if (!webgpuAvailable) { - if (import.meta.env.DEV) { - console.warn('โš ๏ธ WebGPU not available'); - } - isInitializing = false; - initPromise = null; - throw new WebGPUNotAvailableError(); - } - - // Try WebGPU + // Try GPU first if auto, fall back to CPU + // Windows: webgpu (DirectX12/DirectML), Linux: cuda + const devicesToTry: Array<'webgpu' | 'cuda' | 'cpu' | 'wasm'> = + (requestedDevice === 'webgpu' || requestedDevice === 'cuda') + ? [requestedDevice, 'cpu'] + : [requestedDevice as 'cpu' | 'wasm']; + + for (const device of devicesToTry) { try { - if (import.meta.env.DEV) { - console.log('๐Ÿ”ง Initializing WebGPU backend...'); + if (isDev && device === 'webgpu') { + console.log('๐Ÿ”ง Trying WebGPU (DirectX12) backend...'); + } else if (isDev && device === 'cuda') { + console.log('๐Ÿ”ง Trying CUDA GPU backend...'); + } else if (isDev && device === 'cpu') { + console.log('๐Ÿ”ง Using CPU backend...'); + } else if (isDev && device === 'wasm') { + console.log('๐Ÿ”ง Using WASM backend (slower)...'); } - - // Type assertion needed due to complex union types in transformers.js + embedderInstance = await (pipeline as any)( 'feature-extraction', finalConfig.modelId, { - device: 'webgpu', + device: device, dtype: 'fp32', progress_callback: progressCallback, } ); - currentDevice = 'webgpu'; - - if (import.meta.env.DEV) { - console.log('โœ… Using WebGPU backend'); + currentDevice = device; + + if (isDev) { + const label = device === 'webgpu' ? 'GPU (WebGPU/DirectX12)' + : device === 'cuda' ? 'GPU (CUDA)' + : device.toUpperCase(); + console.log(`โœ… Using ${label} backend`); + console.log('โœ… Embedding model loaded successfully'); } - } catch (err) { - if (import.meta.env.DEV) { - console.warn('โš ๏ธ WebGPU initialization failed:', err); + + return embedderInstance!; + } catch (deviceError) { + if (isDev && (device === 'cuda' || device === 'webgpu')) { + const gpuType = device === 'webgpu' ? 'WebGPU' : 'CUDA'; + console.log(`โš ๏ธ ${gpuType} not available, falling back to CPU...`); } - isInitializing = false; - initPromise = null; - embedderInstance = null; - throw new WebGPUNotAvailableError(err as Error); - } - } else { - // WASM mode requested (user chose fallback) - if (import.meta.env.DEV) { - console.log('๐Ÿ”ง Initializing WASM backend (this will be slower)...'); - } - - // Type assertion needed due to complex union types in transformers.js - embedderInstance = await (pipeline as any)( - 'feature-extraction', - finalConfig.modelId, - { - device: 'wasm', // WASM-based CPU execution - dtype: 'fp32', - progress_callback: progressCallback, + // Continue to next device in list + if (device === devicesToTry[devicesToTry.length - 1]) { + throw deviceError; // Last device failed, propagate error } - ); - currentDevice = 'wasm'; - - if (import.meta.env.DEV) { - console.log('โœ… Using WASM backend'); } } - if (import.meta.env.DEV) { - console.log('โœ… Embedding model loaded successfully'); - } - - return embedderInstance!; + throw new Error('No suitable device found for embedding model'); } catch (error) { - // Re-throw WebGPUNotAvailableError as-is - if (error instanceof WebGPUNotAvailableError) { - throw error; - } isInitializing = false; initPromise = null; embedderInstance = null; diff --git a/gitnexus/src/core/embeddings/embedding-pipeline.ts b/gitnexus/src/core/embeddings/embedding-pipeline.ts index 05f8ae7ed..128e5d937 100644 --- a/gitnexus/src/core/embeddings/embedding-pipeline.ts +++ b/gitnexus/src/core/embeddings/embedding-pipeline.ts @@ -9,8 +9,8 @@ * 5. Create vector index for semantic search */ -import { initEmbedder, embedBatch, embedText, embeddingToArray, isEmbedderReady } from './embedder'; -import { generateBatchEmbeddingTexts, generateEmbeddingText } from './text-generator'; +import { initEmbedder, embedBatch, embedText, embeddingToArray, isEmbedderReady } from './embedder.js'; +import { generateBatchEmbeddingTexts, generateEmbeddingText } from './text-generator.js'; import { type EmbeddingProgress, type EmbeddingConfig, @@ -19,7 +19,9 @@ import { type ModelProgress, DEFAULT_EMBEDDING_CONFIG, EMBEDDABLE_LABELS, -} from './types'; +} from './types.js'; + +const isDev = process.env.NODE_ENV !== 'production'; /** * Progress callback type @@ -71,7 +73,7 @@ const queryEmbeddableNodes = async ( } } catch (error) { // Table might not exist or be empty, continue - if (import.meta.env.DEV) { + if (isDev) { console.warn(`Query for ${label} nodes failed:`, error); } } @@ -113,7 +115,7 @@ const createVectorIndex = async ( await executeQuery(cypher); } catch (error) { // Index might already exist - if (import.meta.env.DEV) { + if (isDev) { console.warn('Vector index creation warning:', error); } } @@ -159,7 +161,7 @@ export const runEmbeddingPipeline = async ( modelDownloadPercent: 100, }); - if (import.meta.env.DEV) { + if (isDev) { console.log('๐Ÿ” Querying embeddable nodes...'); } @@ -167,7 +169,7 @@ export const runEmbeddingPipeline = async ( const nodes = await queryEmbeddableNodes(executeQuery); const totalNodes = nodes.length; - if (import.meta.env.DEV) { + if (isDev) { console.log(`๐Ÿ“Š Found ${totalNodes} embeddable nodes`); } @@ -236,7 +238,7 @@ export const runEmbeddingPipeline = async ( totalNodes, }); - if (import.meta.env.DEV) { + if (isDev) { console.log('๐Ÿ“‡ Creating vector index...'); } @@ -250,13 +252,13 @@ export const runEmbeddingPipeline = async ( totalNodes, }); - if (import.meta.env.DEV) { + if (isDev) { console.log('โœ… Embedding pipeline complete!'); } } catch (error) { const errorMessage = error instanceof Error ? error.message : 'Unknown error'; - if (import.meta.env.DEV) { + if (isDev) { console.error('โŒ Embedding pipeline error:', error); } diff --git a/gitnexus/src/core/embeddings/index.ts b/gitnexus/src/core/embeddings/index.ts index 5d384c8d5..4b4f10bb5 100644 --- a/gitnexus/src/core/embeddings/index.ts +++ b/gitnexus/src/core/embeddings/index.ts @@ -4,8 +4,8 @@ * Re-exports for the embedding pipeline system. */ -export * from './types'; -export * from './embedder'; -export * from './text-generator'; -export * from './embedding-pipeline'; +export * from './types.js'; +export * from './embedder.js'; +export * from './text-generator.js'; +export * from './embedding-pipeline.js'; diff --git a/gitnexus/src/core/embeddings/text-generator.ts b/gitnexus/src/core/embeddings/text-generator.ts index 36594e1a8..e3a99ff49 100644 --- a/gitnexus/src/core/embeddings/text-generator.ts +++ b/gitnexus/src/core/embeddings/text-generator.ts @@ -5,8 +5,8 @@ * Combines node metadata with code snippets for semantic matching. */ -import type { EmbeddableNode, EmbeddingConfig } from './types'; -import { DEFAULT_EMBEDDING_CONFIG } from './types'; +import type { EmbeddableNode, EmbeddingConfig } from './types.js'; +import { DEFAULT_EMBEDDING_CONFIG } from './types.js'; /** * Extract the filename from a file path diff --git a/gitnexus/src/core/embeddings/types.ts b/gitnexus/src/core/embeddings/types.ts index e4a04222b..b769b950c 100644 --- a/gitnexus/src/core/embeddings/types.ts +++ b/gitnexus/src/core/embeddings/types.ts @@ -59,8 +59,8 @@ export interface EmbeddingConfig { batchSize: number; /** Embedding vector dimensions */ dimensions: number; - /** Device to use for inference: 'webgpu' for GPU acceleration, 'wasm' for WASM-based CPU */ - device: 'webgpu' | 'wasm'; + /** Device to use for inference: 'auto' tries GPU first, falls back to CPU */ + device: 'auto' | 'webgpu' | 'cuda' | 'cpu' | 'wasm'; /** Maximum characters of code snippet to include */ maxSnippetLength: number; } @@ -74,7 +74,7 @@ export const DEFAULT_EMBEDDING_CONFIG: EmbeddingConfig = { modelId: 'Snowflake/snowflake-arctic-embed-xs', batchSize: 16, dimensions: 384, - device: 'webgpu', // WebGPU preferred, WASM fallback available if user chooses + device: 'auto', maxSnippetLength: 500, }; diff --git a/gitnexus/src/core/graph/graph.ts b/gitnexus/src/core/graph/graph.ts index 1f9653b95..695daf2bf 100644 --- a/gitnexus/src/core/graph/graph.ts +++ b/gitnexus/src/core/graph/graph.ts @@ -1,4 +1,4 @@ -import { GraphNode, GraphRelationship, KnowledgeGraph } from './types' +import { GraphNode, GraphRelationship, KnowledgeGraph } from './types.js' export const createKnowledgeGraph = (): KnowledgeGraph => { const nodeMap = new Map(); diff --git a/gitnexus/src/core/ingestion/ast-cache.ts b/gitnexus/src/core/ingestion/ast-cache.ts index 61775416a..0ae105120 100644 --- a/gitnexus/src/core/ingestion/ast-cache.ts +++ b/gitnexus/src/core/ingestion/ast-cache.ts @@ -1,5 +1,5 @@ import { LRUCache } from 'lru-cache'; -import Parser from 'web-tree-sitter'; +import Parser from 'tree-sitter'; // Define the interface for the Cache export interface ASTCache { @@ -16,8 +16,9 @@ export const createASTCache = (maxSize: number = 50): ASTCache => { max: maxSize, dispose: (tree) => { try { - // CRITICAL: Free the WASM memory when the tree leaves the cache - tree.delete(); + // NOTE: web-tree-sitter has tree.delete(); native tree-sitter trees are GC-managed. + // Keep this try/catch so we don't crash on either runtime. + (tree as any).delete?.(); } catch (e) { console.warn('Failed to delete tree from WASM memory', e); } diff --git a/gitnexus/src/core/ingestion/call-processor.ts b/gitnexus/src/core/ingestion/call-processor.ts index 2b71c5aaa..895e55352 100644 --- a/gitnexus/src/core/ingestion/call-processor.ts +++ b/gitnexus/src/core/ingestion/call-processor.ts @@ -1,11 +1,12 @@ -import { KnowledgeGraph } from '../graph/types'; -import { ASTCache } from './ast-cache'; -import { SymbolTable } from './symbol-table'; -import { ImportMap } from './import-processor'; -import { loadParser, loadLanguage } from '../tree-sitter/parser-loader'; -import { LANGUAGE_QUERIES } from './tree-sitter-queries'; -import { generateId } from '../../lib/utils'; -import { getLanguageFromFilename } from './utils'; +import { KnowledgeGraph } from '../graph/types.js'; +import { ASTCache } from './ast-cache.js'; +import { SymbolTable } from './symbol-table.js'; +import { ImportMap } from './import-processor.js'; +import Parser from 'tree-sitter'; +import { loadParser, loadLanguage } from '../tree-sitter/parser-loader.js'; +import { LANGUAGE_QUERIES } from './tree-sitter-queries.js'; +import { generateId } from '../../lib/utils.js'; +import { getLanguageFromFilename } from './utils.js'; /** * Node types that represent function/method definitions across languages. @@ -156,18 +157,25 @@ export const processCalls = async ( if (!tree) { // Cache Miss: Re-parse - tree = parser.parse(file.content); + // Use larger bufferSize for files > 32KB + try { + tree = parser.parse(file.content, undefined, { bufferSize: 1024 * 256 }); + } catch (parseError) { + // Skip files that can't be parsed + continue; + } wasReparsed = true; } let query; let matches; try { - query = parser.getLanguage().query(queryStr); + const language = parser.getLanguage(); + query = new Parser.Query(language, queryStr); matches = query.matches(tree.rootNode); } catch (queryError) { console.warn(`Query error for ${file.path}:`, queryError); - if (wasReparsed) tree.delete(); + if (wasReparsed) (tree as any).delete?.(); continue; } @@ -218,7 +226,7 @@ export const processCalls = async ( // Cleanup if re-parsed if (wasReparsed) { - tree.delete(); + (tree as any).delete?.(); } } }; diff --git a/gitnexus/src/core/ingestion/cluster-enricher.ts b/gitnexus/src/core/ingestion/cluster-enricher.ts index 51e00d618..0154e3bf3 100644 --- a/gitnexus/src/core/ingestion/cluster-enricher.ts +++ b/gitnexus/src/core/ingestion/cluster-enricher.ts @@ -5,7 +5,7 @@ * Generates semantic names, keywords, and descriptions using an LLM. */ -import { CommunityNode } from './community-processor'; +import { CommunityNode } from './community-processor.js'; // ============================================================================ // TYPES diff --git a/gitnexus/src/core/ingestion/community-processor.ts b/gitnexus/src/core/ingestion/community-processor.ts index 1a8901acc..42194c076 100644 --- a/gitnexus/src/core/ingestion/community-processor.ts +++ b/gitnexus/src/core/ingestion/community-processor.ts @@ -8,9 +8,11 @@ * helping agents navigate the codebase by functional area rather than file structure. */ +// NOTE: graphology + louvain typings are a bit inconsistent across versions. +// Keep these as `any` to avoid blocking the CLI build. import Graph from 'graphology'; import louvain from 'graphology-communities-louvain'; -import { KnowledgeGraph, NodeLabel } from '../graph/types'; +import { KnowledgeGraph, NodeLabel } from '../graph/types.js'; // ============================================================================ // TYPES @@ -94,7 +96,7 @@ export const processCommunities = async ( onProgress?.(`Running Leiden algorithm on ${graph.order} nodes...`, 30); // Step 2: Run Leiden (via Louvain implementation with refinement) - const details = louvain.detailed(graph, { + const details = (louvain as any).detailed(graph, { resolution: 1.0, // Default resolution, can be tuned randomWalk: true, }); @@ -141,9 +143,9 @@ export const processCommunities = async ( * Build a graphology graph containing only symbol nodes and CALLS edges * This is what the Leiden algorithm will cluster */ -const buildGraphologyGraph = (knowledgeGraph: KnowledgeGraph): Graph => { +const buildGraphologyGraph = (knowledgeGraph: KnowledgeGraph): any => { // Use undirected graph for Leiden - it looks at edge density, not direction - const graph = new Graph({ type: 'undirected', allowSelfLoops: false }); + const graph = new (Graph as any)({ type: 'undirected', allowSelfLoops: false }); // Symbol types that should be clustered const symbolTypes = new Set(['Function', 'Class', 'Method', 'Interface']); @@ -189,7 +191,7 @@ const buildGraphologyGraph = (knowledgeGraph: KnowledgeGraph): Graph => { const createCommunityNodes = ( communities: Record, communityCount: number, - graph: Graph, + graph: any, knowledgeGraph: KnowledgeGraph ): CommunityNode[] => { // Group node IDs by community @@ -244,7 +246,7 @@ const createCommunityNodes = ( const generateHeuristicLabel = ( memberIds: string[], nodePathMap: Map, - graph: Graph, + graph: any, commNum: number ): string => { // Collect folder names from file paths @@ -325,7 +327,7 @@ const findCommonPrefix = (strings: string[]): string => { * Calculate cohesion score (0-1) based on internal edge density * Higher cohesion = more internal connections relative to size */ -const calculateCohesion = (memberIds: string[], graph: Graph): number => { +const calculateCohesion = (memberIds: string[], graph: any): number => { if (memberIds.length <= 1) return 1.0; const memberSet = new Set(memberIds); diff --git a/gitnexus/src/core/ingestion/entry-point-scoring.ts b/gitnexus/src/core/ingestion/entry-point-scoring.ts index 1ef3d3ddc..55d0b1035 100644 --- a/gitnexus/src/core/ingestion/entry-point-scoring.ts +++ b/gitnexus/src/core/ingestion/entry-point-scoring.ts @@ -10,7 +10,7 @@ * This module is language-agnostic - language-specific patterns are defined per language. */ -import { detectFrameworkFromPath } from './framework-detection'; +import { detectFrameworkFromPath } from './framework-detection.js'; // ============================================================================ // NAME PATTERNS - All 9 supported languages diff --git a/gitnexus-cli/src/core/ingestion/filesystem-walker.ts b/gitnexus/src/core/ingestion/filesystem-walker.ts similarity index 100% rename from gitnexus-cli/src/core/ingestion/filesystem-walker.ts rename to gitnexus/src/core/ingestion/filesystem-walker.ts diff --git a/gitnexus/src/core/ingestion/heritage-processor.ts b/gitnexus/src/core/ingestion/heritage-processor.ts index 378a3bdd1..f0143a77d 100644 --- a/gitnexus/src/core/ingestion/heritage-processor.ts +++ b/gitnexus/src/core/ingestion/heritage-processor.ts @@ -6,13 +6,14 @@ * - IMPLEMENTS: Class implements an Interface (TS only) */ -import { KnowledgeGraph } from '../graph/types'; -import { ASTCache } from './ast-cache'; -import { SymbolTable } from './symbol-table'; -import { loadParser, loadLanguage } from '../tree-sitter/parser-loader'; -import { LANGUAGE_QUERIES } from './tree-sitter-queries'; -import { generateId } from '../../lib/utils'; -import { getLanguageFromFilename } from './utils'; +import { KnowledgeGraph } from '../graph/types.js'; +import { ASTCache } from './ast-cache.js'; +import { SymbolTable } from './symbol-table.js'; +import Parser from 'tree-sitter'; +import { loadParser, loadLanguage } from '../tree-sitter/parser-loader.js'; +import { LANGUAGE_QUERIES } from './tree-sitter-queries.js'; +import { generateId } from '../../lib/utils.js'; +import { getLanguageFromFilename } from './utils.js'; export const processHeritage = async ( graph: KnowledgeGraph, @@ -42,18 +43,25 @@ export const processHeritage = async ( let wasReparsed = false; if (!tree) { - tree = parser.parse(file.content); + // Use larger bufferSize for files > 32KB + try { + tree = parser.parse(file.content, undefined, { bufferSize: 1024 * 256 }); + } catch (parseError) { + // Skip files that can't be parsed + continue; + } wasReparsed = true; } let query; let matches; try { - query = parser.getLanguage().query(queryStr); + const language = parser.getLanguage(); + query = new Parser.Query(language, queryStr); matches = query.matches(tree.rootNode); } catch (queryError) { console.warn(`Heritage query error for ${file.path}:`, queryError); - if (wasReparsed) tree.delete(); + if (wasReparsed) (tree as any).delete?.(); continue; } @@ -148,7 +156,7 @@ export const processHeritage = async ( // Cleanup if (wasReparsed) { - tree.delete(); + (tree as any).delete?.(); } } }; diff --git a/gitnexus/src/core/ingestion/import-processor.ts b/gitnexus/src/core/ingestion/import-processor.ts index c0cb6bd68..aeac2162f 100644 --- a/gitnexus/src/core/ingestion/import-processor.ts +++ b/gitnexus/src/core/ingestion/import-processor.ts @@ -1,9 +1,12 @@ -import { KnowledgeGraph } from '../graph/types'; -import { ASTCache } from './ast-cache'; -import { loadParser, loadLanguage } from '../tree-sitter/parser-loader'; -import { LANGUAGE_QUERIES } from './tree-sitter-queries'; -import { generateId } from '../../lib/utils'; -import { getLanguageFromFilename } from './utils'; +import { KnowledgeGraph } from '../graph/types.js'; +import { ASTCache } from './ast-cache.js'; +import Parser from 'tree-sitter'; +import { loadParser, loadLanguage } from '../tree-sitter/parser-loader.js'; +import { LANGUAGE_QUERIES } from './tree-sitter-queries.js'; +import { generateId } from '../../lib/utils.js'; +import { getLanguageFromFilename } from './utils.js'; + +const isDev = process.env.NODE_ENV !== 'production'; // Type: Map> // Stores all files that a given file imports from @@ -141,14 +144,21 @@ export const processImports = async ( if (!tree) { // Cache Miss: Re-parse (slower, but necessary if evicted) - tree = parser.parse(file.content); + // Use larger bufferSize for files > 32KB + try { + tree = parser.parse(file.content, undefined, { bufferSize: 1024 * 256 }); + } catch (parseError) { + // Skip files that can't be parsed + continue; + } wasReparsed = true; } let query; let matches; try { - query = parser.getLanguage().query(queryStr); + const language = parser.getLanguage(); + query = new Parser.Query(language, queryStr); matches = query.matches(tree.rootNode); // Removed verbose Java import logging @@ -163,7 +173,7 @@ export const processImports = async ( console.log('AST has errors:', tree.rootNode?.hasError); console.groupEnd(); - if (wasReparsed) tree.delete(); + if (wasReparsed) (tree as any).delete?.(); continue; } @@ -174,7 +184,7 @@ export const processImports = async ( if (captureMap['import']) { const sourceNode = captureMap['import.source']; if (!sourceNode) { - if (import.meta.env.DEV) { + if (isDev) { console.log(`โš ๏ธ Import captured but no source node in ${file.path}`); } return; @@ -224,11 +234,11 @@ export const processImports = async ( // If re-parsed just for this, delete the tree to save memory if (wasReparsed) { - tree.delete(); + (tree as any).delete?.(); } } - if (import.meta.env.DEV) { + if (isDev) { console.log(`๐Ÿ“Š Import processing complete: ${totalImportsResolved}/${totalImportsFound} imports resolved to graph edges`); } }; diff --git a/gitnexus/src/core/ingestion/parsing-processor.ts b/gitnexus/src/core/ingestion/parsing-processor.ts index 807bcf581..cca7098ea 100644 --- a/gitnexus/src/core/ingestion/parsing-processor.ts +++ b/gitnexus/src/core/ingestion/parsing-processor.ts @@ -1,10 +1,11 @@ -import { KnowledgeGraph, GraphNode, GraphRelationship } from '../graph/types'; -import { loadParser, loadLanguage } from '../tree-sitter/parser-loader'; -import { LANGUAGE_QUERIES } from './tree-sitter-queries'; -import { generateId } from '../../lib/utils'; -import { SymbolTable } from './symbol-table'; -import { ASTCache } from './ast-cache'; -import { getLanguageFromFilename } from './utils'; +import { KnowledgeGraph, GraphNode, GraphRelationship } from '../graph/types.js'; +import Parser from 'tree-sitter'; +import { loadParser, loadLanguage } from '../tree-sitter/parser-loader.js'; +import { LANGUAGE_QUERIES } from './tree-sitter-queries.js'; +import { generateId } from '../../lib/utils.js'; +import { SymbolTable } from './symbol-table.js'; +import { ASTCache } from './ast-cache.js'; +import { getLanguageFromFilename } from './utils.js'; export type FileProgressCallback = (current: number, total: number, filePath: string) => void; @@ -134,7 +135,15 @@ export const processParsing = async ( await loadLanguage(language, file.path); // 3. Parse the text content into an AST - const tree = parser.parse(file.content); + // Use larger bufferSize for files > 32KB (default limit) + let tree; + try { + tree = parser.parse(file.content, undefined, { bufferSize: 1024 * 256 }); + } catch (parseError) { + // Skip files that can't be parsed (binary, encoding issues, etc.) + console.warn(`Skipping unparseable file: ${file.path}`); + continue; + } // Store in cache immediately (this might evict an old one) astCache.set(file.path, tree); @@ -150,7 +159,8 @@ export const processParsing = async ( let query; let matches; try { - query = parser.getLanguage().query(queryString); + const language = parser.getLanguage(); + query = new Parser.Query(language, queryString); matches = query.matches(tree.rootNode); } catch (queryError) { console.warn(`Query error for ${file.path}:`, queryError); diff --git a/gitnexus/src/core/ingestion/pipeline.ts b/gitnexus/src/core/ingestion/pipeline.ts index 8c276b312..45b087db7 100644 --- a/gitnexus/src/core/ingestion/pipeline.ts +++ b/gitnexus/src/core/ingestion/pipeline.ts @@ -1,302 +1,265 @@ -import { createKnowledgeGraph } from '../graph/graph'; -import { extractZip, FileEntry } from '../../services/zip'; -import { processStructure } from './structure-processor'; -import { processParsing } from './parsing-processor'; -import { processImports, createImportMap } from './import-processor'; -import { processCalls } from './call-processor'; -import { processHeritage } from './heritage-processor'; -import { processCommunities, CommunityDetectionResult } from './community-processor'; -import { processProcesses, ProcessDetectionResult } from './process-processor'; -import { createSymbolTable } from './symbol-table'; -import { createASTCache } from './ast-cache'; -import { PipelineProgress, PipelineResult } from '../../types/pipeline'; +import { createKnowledgeGraph } from '../graph/graph.js'; +import { processStructure } from './structure-processor.js'; +import { processParsing } from './parsing-processor.js'; +import { processImports, createImportMap } from './import-processor.js'; +import { processCalls } from './call-processor.js'; +import { processHeritage } from './heritage-processor.js'; +import { processCommunities } from './community-processor.js'; +import { processProcesses } from './process-processor.js'; +import { createSymbolTable } from './symbol-table.js'; +import { createASTCache } from './ast-cache.js'; +import { PipelineProgress, PipelineResult } from '../../types/pipeline.js'; +import { walkRepository } from './filesystem-walker.js'; -/** - * Run the ingestion pipeline from a ZIP file - */ -export const runIngestionPipeline = async ( file: File, onProgress: (progress: PipelineProgress) => void): Promise => { - // Phase 1: Extracting (0-15%) - onProgress({ - phase: 'extracting', - percent: 0, - message: 'Extracting ZIP file...', - }); - - // Fake progress for extraction (JSZip doesn't expose progress) - const fakeExtractionProgress = setInterval(() => { - onProgress({ - phase: 'extracting', - percent: Math.min(14, Math.random() * 10 + 5), - message: 'Extracting ZIP file...', - }); - }, 200); - - const files = await extractZip(file); - clearInterval(fakeExtractionProgress); - - // Continue with common pipeline - return runPipelineFromFiles(files, onProgress); -}; +const isDev = process.env.NODE_ENV !== 'production'; -/** - * Run the ingestion pipeline from pre-extracted files (e.g., from git clone) - */ -export const runPipelineFromFiles = async ( - files: FileEntry[], +export const runPipelineFromRepo = async ( + repoPath: string, onProgress: (progress: PipelineProgress) => void ): Promise => { const graph = createKnowledgeGraph(); const fileContents = new Map(); const symbolTable = createSymbolTable(); - const astCache = createASTCache(50); // Keep last 50 files hot + const astCache = createASTCache(50); const importMap = createImportMap(); - // Cleanup function for error handling const cleanup = () => { astCache.clear(); symbolTable.clear(); }; - + try { - // Store file contents for code panel - files.forEach(f => fileContents.set(f.path, f.content)); - - onProgress({ - phase: 'extracting', - percent: 15, - message: 'ZIP extracted successfully', - stats: { filesProcessed: 0, totalFiles: files.length, nodesCreated: 0 }, - }); - - // Phase 2: Structure (15-30%) - onProgress({ - phase: 'structure', - percent: 15, - message: 'Analyzing project structure...', - stats: { filesProcessed: 0, totalFiles: files.length, nodesCreated: 0 }, - }); - - const filePaths = files.map(f => f.path); - processStructure(graph, filePaths); - - onProgress({ - phase: 'structure', - percent: 30, - message: 'Project structure analyzed', - stats: { filesProcessed: files.length, totalFiles: files.length, nodesCreated: graph.nodeCount }, - }); - - // Phase 3: Parsing (30-70%) - onProgress({ - phase: 'parsing', - percent: 30, - message: 'Parsing code definitions...', - stats: { filesProcessed: 0, totalFiles: files.length, nodesCreated: graph.nodeCount }, - }); - - await processParsing(graph, files, symbolTable, astCache, (current, total, filePath) => { - const parsingProgress = 30 + ((current / total) * 40); onProgress({ - phase: 'parsing', - percent: Math.round(parsingProgress), - message: 'Parsing code definitions...', - detail: filePath, - stats: { filesProcessed: current, totalFiles: total, nodesCreated: graph.nodeCount }, + phase: 'extracting', + percent: 0, + message: 'Scanning repository...', }); - }); - - // Phase 4: Imports (70-82%) - onProgress({ - phase: 'imports', - percent: 70, - message: 'Resolving imports...', - stats: { filesProcessed: 0, totalFiles: files.length, nodesCreated: graph.nodeCount }, - }); - - await processImports(graph, files, astCache, importMap, (current, total) => { - const importProgress = 70 + ((current / total) * 12); - onProgress({ - phase: 'imports', - percent: Math.round(importProgress), - message: 'Resolving imports...', - stats: { filesProcessed: current, totalFiles: total, nodesCreated: graph.nodeCount }, + const files = await walkRepository(repoPath, (current, total, filePath) => { + const scanProgress = Math.round((current / total) * 15); + onProgress({ + phase: 'extracting', + percent: scanProgress, + message: 'Scanning repository...', + detail: filePath, + stats: { filesProcessed: current, totalFiles: total, nodesCreated: graph.nodeCount }, + }); }); - }); - - // Debug: Count IMPORTS relationships - if (import.meta.env.DEV) { - const importsCount = graph.relationships.filter(r => r.type === 'IMPORTS').length; - console.log(`๐Ÿ“Š Pipeline: After import phase, graph has ${importsCount} IMPORTS relationships (total: ${graph.relationshipCount})`); - if (importsCount > 0) { - const sample = graph.relationships.filter(r => r.type === 'IMPORTS').slice(0, 3); - sample.forEach(r => console.log(` Sample IMPORTS: ${r.sourceId} โ†’ ${r.targetId}`)); - } - } + files.forEach(f => fileContents.set(f.path, f.content)); - // Phase 5: Calls (82-98%) - onProgress({ - phase: 'calls', - percent: 82, - message: 'Tracing function calls...', - stats: { filesProcessed: 0, totalFiles: files.length, nodesCreated: graph.nodeCount }, - }); - - await processCalls(graph, files, astCache, symbolTable, importMap, (current, total) => { - const callProgress = 82 + ((current / total) * 10); onProgress({ - phase: 'calls', - percent: Math.round(callProgress), - message: 'Tracing function calls...', - stats: { filesProcessed: current, totalFiles: total, nodesCreated: graph.nodeCount }, - }); - }); - - // Phase 6: Heritage - Class inheritance (92-98%) - onProgress({ - phase: 'heritage', - percent: 92, - message: 'Extracting class inheritance...', - stats: { filesProcessed: 0, totalFiles: files.length, nodesCreated: graph.nodeCount }, - }); - - await processHeritage(graph, files, astCache, symbolTable, (current, total) => { - const heritageProgress = 88 + ((current / total) * 4); - onProgress({ - phase: 'heritage', - percent: Math.round(heritageProgress), - message: 'Extracting class inheritance...', - stats: { filesProcessed: current, totalFiles: total, nodesCreated: graph.nodeCount }, - }); - }); - - // Phase 7: Community Detection (92-98%) - onProgress({ - phase: 'communities', - percent: 92, - message: 'Detecting code communities...', - stats: { filesProcessed: files.length, totalFiles: files.length, nodesCreated: graph.nodeCount }, - }); - - const communityResult = await processCommunities(graph, (message, progress) => { - const communityProgress = 92 + (progress * 0.06); - onProgress({ - phase: 'communities', - percent: Math.round(communityProgress), - message, + phase: 'extracting', + percent: 15, + message: 'Repository scanned successfully', stats: { filesProcessed: files.length, totalFiles: files.length, nodesCreated: graph.nodeCount }, }); - }); - // Log community detection results - if (import.meta.env.DEV) { - console.log(`๐Ÿ˜๏ธ Community detection: ${communityResult.stats.totalCommunities} communities found (modularity: ${communityResult.stats.modularity.toFixed(3)})`); - } - - // Add community nodes to the graph - communityResult.communities.forEach(comm => { - graph.addNode({ - id: comm.id, - label: 'Community' as const, - properties: { - name: comm.label, - filePath: '', - heuristicLabel: comm.heuristicLabel, - cohesion: comm.cohesion, - symbolCount: comm.symbolCount, - } + onProgress({ + phase: 'structure', + percent: 15, + message: 'Analyzing project structure...', + stats: { filesProcessed: 0, totalFiles: files.length, nodesCreated: graph.nodeCount }, }); - }); - // Add MEMBER_OF relationships - communityResult.memberships.forEach(membership => { - graph.addRelationship({ - id: `${membership.nodeId}_member_of_${membership.communityId}`, - type: 'MEMBER_OF', - sourceId: membership.nodeId, - targetId: membership.communityId, - confidence: 1.0, - reason: 'leiden-algorithm', + const filePaths = files.map(f => f.path); + processStructure(graph, filePaths); + + onProgress({ + phase: 'structure', + percent: 30, + message: 'Project structure analyzed', + stats: { filesProcessed: files.length, totalFiles: files.length, nodesCreated: graph.nodeCount }, }); - }); - // Phase 8: Process Detection (98-99%) - onProgress({ - phase: 'processes', - percent: 98, - message: 'Detecting execution flows...', - stats: { filesProcessed: files.length, totalFiles: files.length, nodesCreated: graph.nodeCount }, - }); + onProgress({ + phase: 'parsing', + percent: 30, + message: 'Parsing code definitions...', + stats: { filesProcessed: 0, totalFiles: files.length, nodesCreated: graph.nodeCount }, + }); - const processResult = await processProcesses( - graph, - communityResult.memberships, - (message, progress) => { - const processProgress = 98 + (progress * 0.01); + await processParsing(graph, files, symbolTable, astCache, (current, total, filePath) => { + const parsingProgress = 30 + ((current / total) * 40); onProgress({ - phase: 'processes', - percent: Math.round(processProgress), + phase: 'parsing', + percent: Math.round(parsingProgress), + message: 'Parsing code definitions...', + detail: filePath, + stats: { filesProcessed: current, totalFiles: total, nodesCreated: graph.nodeCount }, + }); + }); + + onProgress({ + phase: 'imports', + percent: 70, + message: 'Resolving imports...', + stats: { filesProcessed: 0, totalFiles: files.length, nodesCreated: graph.nodeCount }, + }); + + await processImports(graph, files, astCache, importMap, (current, total) => { + const importProgress = 70 + ((current / total) * 12); + onProgress({ + phase: 'imports', + percent: Math.round(importProgress), + message: 'Resolving imports...', + stats: { filesProcessed: current, totalFiles: total, nodesCreated: graph.nodeCount }, + }); + }); + + if (isDev) { + const importsCount = graph.relationships.filter(r => r.type === 'IMPORTS').length; + console.log(`๐Ÿ“Š Pipeline: After import phase, graph has ${importsCount} IMPORTS relationships (total: ${graph.relationshipCount})`); + } + + onProgress({ + phase: 'calls', + percent: 82, + message: 'Tracing function calls...', + stats: { filesProcessed: 0, totalFiles: files.length, nodesCreated: graph.nodeCount }, + }); + + await processCalls(graph, files, astCache, symbolTable, importMap, (current, total) => { + const callProgress = 82 + ((current / total) * 10); + onProgress({ + phase: 'calls', + percent: Math.round(callProgress), + message: 'Tracing function calls...', + stats: { filesProcessed: current, totalFiles: total, nodesCreated: graph.nodeCount }, + }); + }); + + onProgress({ + phase: 'heritage', + percent: 92, + message: 'Extracting class inheritance...', + stats: { filesProcessed: 0, totalFiles: files.length, nodesCreated: graph.nodeCount }, + }); + + await processHeritage(graph, files, astCache, symbolTable, (current, total) => { + const heritageProgress = 88 + ((current / total) * 4); + onProgress({ + phase: 'heritage', + percent: Math.round(heritageProgress), + message: 'Extracting class inheritance...', + stats: { filesProcessed: current, totalFiles: total, nodesCreated: graph.nodeCount }, + }); + }); + + onProgress({ + phase: 'communities', + percent: 92, + message: 'Detecting code communities...', + stats: { filesProcessed: files.length, totalFiles: files.length, nodesCreated: graph.nodeCount }, + }); + + const communityResult = await processCommunities(graph, (message, progress) => { + const communityProgress = 92 + (progress * 0.06); + onProgress({ + phase: 'communities', + percent: Math.round(communityProgress), message, stats: { filesProcessed: files.length, totalFiles: files.length, nodesCreated: graph.nodeCount }, }); + }); + + if (isDev) { + console.log(`๐Ÿ˜๏ธ Community detection: ${communityResult.stats.totalCommunities} communities found (modularity: ${communityResult.stats.modularity.toFixed(3)})`); } - ); - // Log process detection results - if (import.meta.env.DEV) { - console.log(`๐Ÿ”„ Process detection: ${processResult.stats.totalProcesses} processes found (${processResult.stats.crossCommunityCount} cross-community)`); - } + communityResult.communities.forEach(comm => { + graph.addNode({ + id: comm.id, + label: 'Community' as const, + properties: { + name: comm.label, + filePath: '', + heuristicLabel: comm.heuristicLabel, + cohesion: comm.cohesion, + symbolCount: comm.symbolCount, + } + }); + }); - // Add Process nodes to the graph - processResult.processes.forEach(proc => { - graph.addNode({ - id: proc.id, - label: 'Process' as const, - properties: { - name: proc.label, - filePath: '', - heuristicLabel: proc.heuristicLabel, - processType: proc.processType, - stepCount: proc.stepCount, - communities: proc.communities, - entryPointId: proc.entryPointId, - terminalId: proc.terminalId, + communityResult.memberships.forEach(membership => { + graph.addRelationship({ + id: `${membership.nodeId}_member_of_${membership.communityId}`, + type: 'MEMBER_OF', + sourceId: membership.nodeId, + targetId: membership.communityId, + confidence: 1.0, + reason: 'leiden-algorithm', + }); + }); + + onProgress({ + phase: 'processes', + percent: 98, + message: 'Detecting execution flows...', + stats: { filesProcessed: files.length, totalFiles: files.length, nodesCreated: graph.nodeCount }, + }); + + const processResult = await processProcesses( + graph, + communityResult.memberships, + (message, progress) => { + const processProgress = 98 + (progress * 0.01); + onProgress({ + phase: 'processes', + percent: Math.round(processProgress), + message, + stats: { filesProcessed: files.length, totalFiles: files.length, nodesCreated: graph.nodeCount }, + }); } + ); + + if (isDev) { + console.log(`๐Ÿ”„ Process detection: ${processResult.stats.totalProcesses} processes found (${processResult.stats.crossCommunityCount} cross-community)`); + } + + processResult.processes.forEach(proc => { + graph.addNode({ + id: proc.id, + label: 'Process' as const, + properties: { + name: proc.label, + filePath: '', + heuristicLabel: proc.heuristicLabel, + processType: proc.processType, + stepCount: proc.stepCount, + communities: proc.communities, + entryPointId: proc.entryPointId, + terminalId: proc.terminalId, + } + }); }); - }); - // Add STEP_IN_PROCESS relationships - processResult.steps.forEach(step => { - graph.addRelationship({ - id: `${step.nodeId}_step_${step.step}_${step.processId}`, - type: 'STEP_IN_PROCESS', - sourceId: step.nodeId, - targetId: step.processId, - confidence: 1.0, - reason: 'trace-detection', - step: step.step, + processResult.steps.forEach(step => { + graph.addRelationship({ + id: `${step.nodeId}_step_${step.step}_${step.processId}`, + type: 'STEP_IN_PROCESS', + sourceId: step.nodeId, + targetId: step.processId, + confidence: 1.0, + reason: 'trace-detection', + step: step.step, + }); }); - }); - - // Phase 9: Complete (100%) - onProgress({ - phase: 'complete', - percent: 100, - message: `Graph complete! ${communityResult.stats.totalCommunities} communities, ${processResult.stats.totalProcesses} processes detected.`, - stats: { - filesProcessed: files.length, - totalFiles: files.length, - nodesCreated: graph.nodeCount - }, - }); + onProgress({ + phase: 'complete', + percent: 100, + message: `Graph complete! ${communityResult.stats.totalCommunities} communities, ${processResult.stats.totalProcesses} processes detected.`, + stats: { + filesProcessed: files.length, + totalFiles: files.length, + nodesCreated: graph.nodeCount + }, + }); - // Cleanup WASM memory before returning - astCache.clear(); - - return { graph, fileContents, communityResult, processResult }; + astCache.clear(); + return { graph, fileContents, communityResult, processResult }; } catch (error) { cleanup(); throw error; diff --git a/gitnexus/src/core/ingestion/process-processor.ts b/gitnexus/src/core/ingestion/process-processor.ts index cf983d2e6..ccb1bf1cc 100644 --- a/gitnexus/src/core/ingestion/process-processor.ts +++ b/gitnexus/src/core/ingestion/process-processor.ts @@ -10,9 +10,11 @@ * Processes help agents understand how features work through the codebase. */ -import { KnowledgeGraph, GraphNode, GraphRelationship, NodeLabel } from '../graph/types'; -import { CommunityMembership } from './community-processor'; -import { calculateEntryPointScore, isTestFile } from './entry-point-scoring'; +import { KnowledgeGraph, GraphNode, GraphRelationship, NodeLabel } from '../graph/types.js'; +import { CommunityMembership } from './community-processor.js'; +import { calculateEntryPointScore, isTestFile } from './entry-point-scoring.js'; + +const isDev = process.env.NODE_ENV !== 'production'; // ============================================================================ // CONFIGURATION @@ -289,7 +291,7 @@ const findEntryPoints = ( const sorted = entryPointCandidates.sort((a, b) => b.score - a.score); // DEBUG: Log top candidates with new scoring details - if (sorted.length > 0 && typeof import.meta !== 'undefined' && import.meta.env?.DEV) { + if (sorted.length > 0 && isDev) { console.log(`[Process] Top 10 entry point candidates (new scoring):`); sorted.slice(0, 10).forEach((c, i) => { const node = graph.nodes.find(n => n.id === c.id); diff --git a/gitnexus/src/core/ingestion/structure-processor.ts b/gitnexus/src/core/ingestion/structure-processor.ts index c73a5837c..de1a53e49 100644 --- a/gitnexus/src/core/ingestion/structure-processor.ts +++ b/gitnexus/src/core/ingestion/structure-processor.ts @@ -1,5 +1,5 @@ -import { generateId } from "@/lib/utils"; -import { KnowledgeGraph, GraphNode, GraphRelationship } from "../graph/types"; +import { generateId } from "../../lib/utils.js"; +import { KnowledgeGraph, GraphNode, GraphRelationship } from "../graph/types.js"; export const processStructure = ( graph: KnowledgeGraph, paths: string[])=>{ paths.forEach( path => { diff --git a/gitnexus/src/core/ingestion/tree-sitter-queries.ts b/gitnexus/src/core/ingestion/tree-sitter-queries.ts index a931b4a40..f8bcd7add 100644 --- a/gitnexus/src/core/ingestion/tree-sitter-queries.ts +++ b/gitnexus/src/core/ingestion/tree-sitter-queries.ts @@ -1,4 +1,4 @@ -import { SupportedLanguages } from '../../config/supported-languages'; +import { SupportedLanguages } from '../../config/supported-languages.js'; /* * Tree-sitter queries for extracting code definitions. diff --git a/gitnexus/src/core/ingestion/utils.ts b/gitnexus/src/core/ingestion/utils.ts index 959eb55dc..5ac12a8be 100644 --- a/gitnexus/src/core/ingestion/utils.ts +++ b/gitnexus/src/core/ingestion/utils.ts @@ -1,4 +1,4 @@ -import { SupportedLanguages } from '../../config/supported-languages'; +import { SupportedLanguages } from '../../config/supported-languages.js'; /** * Map file extension to SupportedLanguage enum diff --git a/gitnexus/src/core/kuzu/csv-generator.ts b/gitnexus/src/core/kuzu/csv-generator.ts index 43df569cf..b23471deb 100644 --- a/gitnexus/src/core/kuzu/csv-generator.ts +++ b/gitnexus/src/core/kuzu/csv-generator.ts @@ -10,8 +10,8 @@ * - All fields are consistently quoted for safety with code content */ -import { KnowledgeGraph, GraphNode, NodeLabel } from '../graph/types'; -import { NODE_TABLES, NodeTableName } from './schema'; +import { KnowledgeGraph, GraphNode, NodeLabel } from '../graph/types.js'; +import { NODE_TABLES, NodeTableName } from './schema.js'; // ============================================================================ // CSV ESCAPE UTILITIES @@ -133,9 +133,14 @@ export interface CSVData { const generateFileCSV = (nodes: GraphNode[], fileContents: Map): string => { const headers = ['id', 'name', 'filePath', 'content']; const rows: string[] = [headers.join(',')]; + const seenIds = new Set(); for (const node of nodes) { if (node.label !== 'File') continue; + // Skip duplicates + if (seenIds.has(node.id)) continue; + seenIds.add(node.id); + const content = extractContent(node, fileContents); rows.push([ escapeCSVField(node.id), diff --git a/gitnexus/src/core/kuzu/kuzu-adapter.ts b/gitnexus/src/core/kuzu/kuzu-adapter.ts index c16e2edf3..e42a6fb7c 100644 --- a/gitnexus/src/core/kuzu/kuzu-adapter.ts +++ b/gitnexus/src/core/kuzu/kuzu-adapter.ts @@ -1,358 +1,225 @@ -/** - * KuzuDB Adapter - * - * Manages the KuzuDB WASM instance for client-side graph database operations. - * Uses the "Snapshot / Bulk Load" pattern with COPY FROM for performance. - * - * Multi-table schema: separate tables for File, Function, Class, etc. - */ - -import { KnowledgeGraph } from '../graph/types'; -import { - NODE_TABLES, +import fs from 'fs/promises'; +import path from 'path'; +import kuzu from 'kuzu'; +import { KnowledgeGraph } from '../graph/types.js'; +import { + NODE_TABLES, REL_TABLE_NAME, - SCHEMA_QUERIES, + SCHEMA_QUERIES, EMBEDDING_TABLE_NAME, NodeTableName, -} from './schema'; -import { generateAllCSVs } from './csv-generator'; +} from './schema.js'; +import { generateAllCSVs } from './csv-generator.js'; -// Holds the reference to the dynamically loaded module -let kuzu: any = null; -let db: any = null; -let conn: any = null; +let db: kuzu.Database | null = null; +let conn: kuzu.Connection | null = null; -/** - * Initialize KuzuDB WASM module and create in-memory database - */ -export const initKuzu = async () => { - if (conn) return { db, conn, kuzu }; +const normalizeCopyPath = (filePath: string): string => filePath.replace(/\\/g, '/'); +export const initKuzu = async (dbPath: string) => { + if (conn) return { db, conn }; + + // kuzu v0.11 expects the database path to NOT exist (it will create it) + // or to be an existing valid kuzu database + // If an empty directory exists from a previous clean, remove it try { - if (import.meta.env.DEV) console.log('๐Ÿš€ Initializing KuzuDB...'); - - // 1. Dynamic Import (Fixes the "not a function" bundler issue) - const kuzuModule = await import('kuzu-wasm'); - - // 2. Handle Vite/Webpack "default" wrapping - kuzu = kuzuModule.default || kuzuModule; - - // 3. Initialize WASM - await kuzu.init(); - - // 4. Create Database with 512MB buffer pool - const BUFFER_POOL_SIZE = 512 * 1024 * 1024; // 512MB - db = new kuzu.Database(':memory:', BUFFER_POOL_SIZE); - conn = new kuzu.Connection(db); - - if (import.meta.env.DEV) console.log('โœ… KuzuDB WASM Initialized'); - - // 5. Initialize Schema (all node tables, then rel tables, then embedding table) - for (const schemaQuery of SCHEMA_QUERIES) { - try { - await conn.query(schemaQuery); - } catch (e) { - // Schema might already exist, skip - if (import.meta.env.DEV) { - console.warn('Schema creation skipped (may already exist):', e); - } + const stat = await fs.stat(dbPath); + if (stat.isDirectory()) { + // Check if it's an empty directory + const files = await fs.readdir(dbPath); + if (files.length === 0) { + // Empty directory - remove it so kuzu can create fresh + await fs.rmdir(dbPath); } } - - if (import.meta.env.DEV) console.log('โœ… KuzuDB Multi-Table Schema Created'); - - return { db, conn, kuzu }; - } catch (error) { - if (import.meta.env.DEV) console.error('โŒ KuzuDB Initialization Failed:', error); - throw error; + } catch { + // Path doesn't exist, which is what kuzu v0.11 wants for a new database } + + // Ensure parent directory exists + const parentDir = path.dirname(dbPath); + await fs.mkdir(parentDir, { recursive: true }); + + db = new kuzu.Database(dbPath); + conn = new kuzu.Connection(db); + + for (const schemaQuery of SCHEMA_QUERIES) { + try { + await conn.query(schemaQuery); + } catch { + // Schema may already exist + } + } + + return { db, conn }; }; -/** - * Load a KnowledgeGraph into KuzuDB using COPY FROM (bulk load) - * Uses batched CSV writes and COPY statements for optimal performance - */ export const loadGraphToKuzu = async ( - graph: KnowledgeGraph, - fileContents: Map + graph: KnowledgeGraph, + fileContents: Map, + storagePath: string ) => { - const { conn, kuzu } = await initKuzu(); - - try { - if (import.meta.env.DEV) console.log(`KuzuDB: Generating CSVs for ${graph.nodeCount} nodes...`); - - // 1. Generate all CSVs (per-table) - const csvData = generateAllCSVs(graph, fileContents); - - const fs = kuzu.FS; - - // 2. Write all node CSVs to virtual filesystem - const nodeFiles: Array<{ table: NodeTableName; path: string }> = []; - for (const [tableName, csv] of csvData.nodes.entries()) { - // Skip empty CSVs (only header row) - if (csv.split('\n').length <= 1) continue; - - const path = `/${tableName.toLowerCase()}.csv`; - try { await fs.unlink(path); } catch {} - await fs.writeFile(path, csv); - nodeFiles.push({ table: tableName, path }); - } - - // 3. Parse relation CSV and prepare for INSERT (COPY FROM doesn't work with multi-pair tables) - const relLines = csvData.relCSV.split('\n').slice(1).filter(line => line.trim()); - const relCount = relLines.length; - - if (import.meta.env.DEV) { - console.log(`KuzuDB: Wrote ${nodeFiles.length} node CSVs, ${relCount} relations to insert`); - } - - // 4. COPY all node tables (must complete before rels due to FK constraints) - for (const { table, path } of nodeFiles) { - const copyQuery = getCopyQuery(table, path); - await conn.query(copyQuery); - } - - // 5. INSERT relations one by one (COPY doesn't work with multi-pair REL tables) - // Parse CSV format: "from","to","type",confidence,"reason" - let insertedRels = 0; - let skippedRels = 0; - const skippedRelStats = new Map(); - for (const line of relLines) { - try { - // Parse CSV - handle quoted fields and numeric confidence - // Parse CSV - handle quoted fields and numeric confidence - // Format: "from","to","type",confidence,"reason",step - // Note: step is unquoted numeric - const match = line.match(/"([^"]*)","([^"]*)","([^"]*)",([0-9.]+),"([^"]*)",([0-9-]+)/); - if (!match) continue; - - const [, fromId, toId, relType, confidenceStr, reason, stepStr] = match; - const confidence = parseFloat(confidenceStr) || 1.0; - const step = parseInt(stepStr) || 0; - - // Extract labels from node IDs - // Community nodes have IDs like "comm_14" (no colon) - // Other nodes have IDs like "Label:path:name" - const getNodeLabel = (nodeId: string): string => { - if (nodeId.startsWith('comm_')) { - return 'Community'; - } - if (nodeId.startsWith('proc_')) { - return 'Process'; - } - return nodeId.split(':')[0]; - }; - - // Reserved Cypher keywords need backtick escaping - const RESERVED_LABELS = ['Macro', 'Enum', 'Union', 'Const', 'Module', 'Struct']; - const escapeLabel = (label: string): string => { - return RESERVED_LABELS.includes(label) ? `\`${label}\`` : label; - }; - - const fromLabel = escapeLabel(getNodeLabel(fromId)); - const toLabel = escapeLabel(getNodeLabel(toId)); - - // INSERT with explicit node matching (including confidence and reason) - const insertQuery = ` - MATCH (a:${fromLabel} {id: '${fromId.replace(/'/g, "''")}'}), - (b:${toLabel} {id: '${toId.replace(/'/g, "''")}'}) - CREATE (a)-[:${REL_TABLE_NAME} {type: '${relType}', confidence: ${confidence}, reason: '${reason.replace(/'/g, "''")}', step: ${step}}]->(b) - `; - await conn.query(insertQuery); - insertedRels++; - } catch (err) { - // Skip failed insertions (nodes might not exist, or relation pair not allowed by schema) - skippedRels++; - const match = line.match(/"([^"]*)","([^"]*)","([^"]*)",([0-9.]+),"([^"]*)"/); - if (match) { - const [, fromId, toId, relType] = match; - const getNodeLabel = (nodeId: string): string => { - if (nodeId.startsWith('comm_')) return 'Community'; - if (nodeId.startsWith('proc_')) return 'Process'; - return nodeId.split(':')[0]; - }; - const fromLabel = getNodeLabel(fromId); - const toLabel = getNodeLabel(toId); - const key = `${relType}:${fromLabel}->` + toLabel; - skippedRelStats.set(key, (skippedRelStats.get(key) || 0) + 1); - - // Log each skipped relation - if (import.meta.env.DEV) { - console.warn(`โš ๏ธ Skipped: ${key} | "${fromId}" โ†’ "${toId}" | ${err instanceof Error ? err.message : String(err)}`); - } - } - } - } - - if (import.meta.env.DEV) { - console.log(`KuzuDB: Inserted ${insertedRels}/${relCount} relations`); - if (skippedRels > 0) { - const topSkipped = Array.from(skippedRelStats.entries()) - .sort((a, b) => b[1] - a[1]) - .slice(0, 10); - console.warn(`KuzuDB: Skipped ${skippedRels}/${relCount} relations (top by kind/pair):`, topSkipped); - } - } - - // 6. Verify results - let totalNodes = 0; - for (const tableName of NODE_TABLES) { - try { - const countRes = await conn.query(`MATCH (n:${tableName}) RETURN count(n) AS cnt`); - const countRow = await countRes.getNext(); - const count = countRow ? (countRow.cnt ?? countRow[0] ?? 0) : 0; - totalNodes += Number(count); - } catch { - // Table might be empty, skip - } - } - - if (import.meta.env.DEV) console.log(`โœ… KuzuDB Bulk Load Complete. Total nodes: ${totalNodes}, edges: ${insertedRels}`); - - // 7. Cleanup CSV files - for (const { path } of nodeFiles) { - try { await fs.unlink(path); } catch {} - } - - return { success: true, count: totalNodes }; - - } catch (error) { - if (import.meta.env.DEV) console.error('โŒ KuzuDB Bulk Load Failed:', error); - return { success: false, count: 0 }; + if (!conn) { + throw new Error('KuzuDB not initialized. Call initKuzu first.'); } + + const csvData = generateAllCSVs(graph, fileContents); + const csvDir = path.join(storagePath, 'csv'); + await fs.mkdir(csvDir, { recursive: true }); + + const nodeFiles: Array<{ table: NodeTableName; path: string }> = []; + for (const [tableName, csv] of csvData.nodes.entries()) { + if (csv.split('\n').length <= 1) continue; + const filePath = path.join(csvDir, `${tableName.toLowerCase()}.csv`); + await fs.writeFile(filePath, csv, 'utf-8'); + nodeFiles.push({ table: tableName, path: filePath }); + } + + const relLines = csvData.relCSV.split('\n').slice(1).filter(line => line.trim()); + + for (const { table, path: filePath } of nodeFiles) { + const copyQuery = getCopyQuery(table, normalizeCopyPath(filePath)); + await conn.query(copyQuery); + } + + let insertedRels = 0; + let skippedRels = 0; + for (const line of relLines) { + try { + const match = line.match(/"([^"]*)","([^"]*)","([^"]*)",([0-9.]+),"([^"]*)",([0-9-]+)/); + if (!match) continue; + const [, fromId, toId, relType, confidenceStr, reason, stepStr] = match; + const confidence = parseFloat(confidenceStr) || 1.0; + const step = parseInt(stepStr) || 0; + + const getNodeLabel = (nodeId: string): string => { + if (nodeId.startsWith('comm_')) return 'Community'; + if (nodeId.startsWith('proc_')) return 'Process'; + return nodeId.split(':')[0]; + }; + + const RESERVED_LABELS = ['Macro', 'Enum', 'Union', 'Const', 'Module', 'Struct']; + const escapeLabel = (label: string): string => { + return RESERVED_LABELS.includes(label) ? `\`${label}\`` : label; + }; + + const fromLabel = escapeLabel(getNodeLabel(fromId)); + const toLabel = escapeLabel(getNodeLabel(toId)); + + const insertQuery = ` + MATCH (a:${fromLabel} {id: '${fromId.replace(/'/g, "''")}' }), + (b:${toLabel} {id: '${toId.replace(/'/g, "''")}' }) + CREATE (a)-[:${REL_TABLE_NAME} {type: '${relType}', confidence: ${confidence}, reason: '${reason.replace(/'/g, "''")}', step: ${step}}]->(b) + `; + await conn.query(insertQuery); + insertedRels++; + } catch { + skippedRels++; + } + } + + // Cleanup CSVs + for (const { path: filePath } of nodeFiles) { + try { + await fs.unlink(filePath); + } catch { + // ignore + } + } + + return { success: true, insertedRels, skippedRels }; }; -/** - * Get the COPY query for a node table with correct column mapping - */ -const getCopyQuery = (table: NodeTableName, path: string): string => { - // File and Folder have different columns than code elements +const getCopyQuery = (table: NodeTableName, filePath: string): string => { if (table === 'File') { - return `COPY File(id, name, filePath, content) FROM "${path}" (HEADER=true, PARALLEL=false)`; + return `COPY File(id, name, filePath, content) FROM "${filePath}" (HEADER=true, PARALLEL=false)`; } if (table === 'Folder') { - return `COPY Folder(id, name, filePath) FROM "${path}" (HEADER=true, PARALLEL=false)`; + return `COPY Folder(id, name, filePath) FROM "${filePath}" (HEADER=true, PARALLEL=false)`; } if (table === 'Community') { - return `COPY Community(id, label, heuristicLabel, keywords, description, enrichedBy, cohesion, symbolCount) FROM "${path}" (HEADER=true, PARALLEL=false)`; + return `COPY Community(id, label, heuristicLabel, keywords, description, enrichedBy, cohesion, symbolCount) FROM "${filePath}" (HEADER=true, PARALLEL=false)`; } if (table === 'Process') { - return `COPY Process(id, label, heuristicLabel, processType, stepCount, communities, entryPointId, terminalId) FROM "${path}" (HEADER=true, PARALLEL=false)`; + return `COPY Process(id, label, heuristicLabel, processType, stepCount, communities, entryPointId, terminalId) FROM "${filePath}" (HEADER=true, PARALLEL=false)`; } - // All code element tables: Function, Class, Interface, Method, CodeElement - return `COPY ${table}(id, name, filePath, startLine, endLine, content) FROM "${path}" (HEADER=true, PARALLEL=false)`; + return `COPY ${table}(id, name, filePath, startLine, endLine, content) FROM "${filePath}" (HEADER=true, PARALLEL=false)`; }; -/** - * Execute a Cypher query against the database - * Returns results as named objects (not tuples) for better usability - */ export const executeQuery = async (cypher: string): Promise => { if (!conn) { - await initKuzu(); - } - - try { - const result = await conn.query(cypher); - - // Extract column names from RETURN clause - const returnMatch = cypher.match(/RETURN\s+(.+?)(?:\s+ORDER|\s+LIMIT|\s+SKIP|\s*$)/is); - let columnNames: string[] = []; - if (returnMatch) { - // Parse RETURN clause to get column names/aliases - // Handles: "a.name, b.filePath AS path, count(x) AS cnt" - const returnClause = returnMatch[1]; - columnNames = returnClause.split(',').map(col => { - col = col.trim(); - // Check for AS alias - const asMatch = col.match(/\s+AS\s+(\w+)\s*$/i); - if (asMatch) return asMatch[1]; - // Check for property access like n.name - const propMatch = col.match(/\.(\w+)\s*$/); - if (propMatch) return propMatch[1]; - // Check for function call like count(x) - const funcMatch = col.match(/^(\w+)\s*\(/); - if (funcMatch) return funcMatch[1]; - // Just use as-is if simple identifier - return col.replace(/[^a-zA-Z0-9_]/g, '_'); - }); - } - - // Collect all rows - const rows: any[] = []; - while (await result.hasNext()) { - const row = await result.getNext(); - - // Convert tuple to named object if we have column names and row is array - if (Array.isArray(row) && columnNames.length === row.length) { - const namedRow: Record = {}; - for (let i = 0; i < row.length; i++) { - namedRow[columnNames[i]] = row[i]; - } - rows.push(namedRow); - } else { - // Already an object or column count doesn't match - rows.push(row); - } - } - - return rows; - } catch (error) { - if (import.meta.env.DEV) console.error('Query execution failed:', error); - throw error; + throw new Error('KuzuDB not initialized. Call initKuzu first.'); } + + const queryResult = await conn.query(cypher); + // kuzu v0.11 uses getAll() instead of hasNext()/getNext() + // Query returns QueryResult for single queries, QueryResult[] for multi-statement + const result = Array.isArray(queryResult) ? queryResult[0] : queryResult; + const rows = await result.getAll(); + return rows; }; -/** - * Get database statistics - */ -export const getKuzuStats = async (): Promise<{ nodes: number; edges: number }> => { +export const executeWithReusedStatement = async ( + cypher: string, + paramsList: Array> +): Promise => { if (!conn) { - return { nodes: 0, edges: 0 }; + throw new Error('KuzuDB not initialized. Call initKuzu first.'); } + if (paramsList.length === 0) return; - try { - // Count nodes across all tables - let totalNodes = 0; - for (const tableName of NODE_TABLES) { - try { - const nodeResult = await conn.query(`MATCH (n:${tableName}) RETURN count(n) AS cnt`); - const nodeRow = await nodeResult.getNext(); - totalNodes += Number(nodeRow?.cnt ?? nodeRow?.[0] ?? 0); - } catch { - // Table might not exist or be empty - } + const SUB_BATCH_SIZE = 4; + for (let i = 0; i < paramsList.length; i += SUB_BATCH_SIZE) { + const subBatch = paramsList.slice(i, i + SUB_BATCH_SIZE); + const stmt = await conn.prepare(cypher); + if (!stmt.isSuccess()) { + const errMsg = await stmt.getErrorMessage(); + throw new Error(`Prepare failed: ${errMsg}`); } - - // Count edges from single relation table - let totalEdges = 0; try { - const edgeResult = await conn.query(`MATCH ()-[r:${REL_TABLE_NAME}]->() RETURN count(r) AS cnt`); - const edgeRow = await edgeResult.getNext(); - totalEdges = Number(edgeRow?.cnt ?? edgeRow?.[0] ?? 0); - } catch { - // Table might not exist or be empty + for (const params of subBatch) { + await conn.execute(stmt, params); + } + } catch (e) { + // Log the error and continue with next batch + console.warn('Batch execution error:', e); } - - return { nodes: totalNodes, edges: totalEdges }; - } catch (error) { - if (import.meta.env.DEV) { - console.warn('Failed to get Kuzu stats:', error); - } - return { nodes: 0, edges: 0 }; + // Note: kuzu 0.8.2 PreparedStatement doesn't require explicit close() } }; -/** - * Check if KuzuDB is initialized and has data - */ -export const isKuzuReady = (): boolean => { - return conn !== null && db !== null; +export const getKuzuStats = async (): Promise<{ nodes: number; edges: number }> => { + if (!conn) return { nodes: 0, edges: 0 }; + + let totalNodes = 0; + for (const tableName of NODE_TABLES) { + try { + const queryResult = await conn.query(`MATCH (n:${tableName}) RETURN count(n) AS cnt`); + const nodeResult = Array.isArray(queryResult) ? queryResult[0] : queryResult; + const nodeRows = await nodeResult.getAll(); + if (nodeRows.length > 0) { + totalNodes += Number(nodeRows[0]?.cnt ?? nodeRows[0]?.[0] ?? 0); + } + } catch { + // ignore + } + } + + let totalEdges = 0; + try { + const queryResult = await conn.query(`MATCH ()-[r:${REL_TABLE_NAME}]->() RETURN count(r) AS cnt`); + const edgeResult = Array.isArray(queryResult) ? queryResult[0] : queryResult; + const edgeRows = await edgeResult.getAll(); + if (edgeRows.length > 0) { + totalEdges = Number(edgeRows[0]?.cnt ?? edgeRows[0]?.[0] ?? 0); + } + } catch { + // ignore + } + + return { nodes: totalNodes, edges: totalEdges }; }; -/** - * Close the database connection (cleanup) - */ export const closeKuzu = async (): Promise => { if (conn) { try { @@ -366,155 +233,11 @@ export const closeKuzu = async (): Promise => { } catch {} db = null; } - kuzu = null; }; -/** - * Execute a prepared statement with parameters - * @param cypher - Cypher query with $param placeholders - * @param params - Object mapping param names to values - * @returns Query results - */ -export const executePrepared = async ( - cypher: string, - params: Record -): Promise => { - if (!conn) { - await initKuzu(); - } - - try { - const stmt = await conn.prepare(cypher); - if (!stmt.isSuccess()) { - const errMsg = await stmt.getErrorMessage(); - throw new Error(`Prepare failed: ${errMsg}`); - } - - const result = await conn.execute(stmt, params); - - const rows: any[] = []; - while (await result.hasNext()) { - const row = await result.getNext(); - rows.push(row); - } - - await stmt.close(); - return rows; - } catch (error) { - if (import.meta.env.DEV) console.error('Prepared query failed:', error); - throw error; - } -}; +export const isKuzuReady = (): boolean => conn !== null && db !== null; + +export const getEmbeddingTableName = (): string => EMBEDDING_TABLE_NAME; + -/** - * Execute a prepared statement with multiple parameter sets in small sub-batches - */ -export const executeWithReusedStatement = async ( - cypher: string, - paramsList: Array> -): Promise => { - if (!conn) { - await initKuzu(); - } - - if (paramsList.length === 0) return; - - const SUB_BATCH_SIZE = 4; - - for (let i = 0; i < paramsList.length; i += SUB_BATCH_SIZE) { - const subBatch = paramsList.slice(i, i + SUB_BATCH_SIZE); - - const stmt = await conn.prepare(cypher); - if (!stmt.isSuccess()) { - const errMsg = await stmt.getErrorMessage(); - throw new Error(`Prepare failed: ${errMsg}`); - } - - try { - for (const params of subBatch) { - await conn.execute(stmt, params); - } - } finally { - await stmt.close(); - } - - if (i + SUB_BATCH_SIZE < paramsList.length) { - await new Promise(r => setTimeout(r, 0)); - } - } -}; -/** - * Test if array parameters work with prepared statements - */ -export const testArrayParams = async (): Promise<{ success: boolean; error?: string }> => { - if (!conn) { - await initKuzu(); - } - - try { - const testEmbedding = new Array(384).fill(0).map((_, i) => i / 384); - - // Get any node ID to test with (try File first, then others) - let testNodeId: string | null = null; - for (const tableName of NODE_TABLES) { - try { - const nodeResult = await conn.query(`MATCH (n:${tableName}) RETURN n.id AS id LIMIT 1`); - const nodeRow = await nodeResult.getNext(); - if (nodeRow) { - testNodeId = nodeRow.id ?? nodeRow[0]; - break; - } - } catch {} - } - - if (!testNodeId) { - return { success: false, error: 'No nodes found to test with' }; - } - - if (import.meta.env.DEV) { - console.log('๐Ÿงช Testing array params with node:', testNodeId); - } - - // First create an embedding entry - const createQuery = `CREATE (e:${EMBEDDING_TABLE_NAME} {nodeId: $nodeId, embedding: $embedding})`; - const stmt = await conn.prepare(createQuery); - - if (!stmt.isSuccess()) { - const errMsg = await stmt.getErrorMessage(); - return { success: false, error: `Prepare failed: ${errMsg}` }; - } - - await conn.execute(stmt, { - nodeId: testNodeId, - embedding: testEmbedding, - }); - - await stmt.close(); - - // Verify it was stored - const verifyResult = await conn.query( - `MATCH (e:${EMBEDDING_TABLE_NAME} {nodeId: '${testNodeId}'}) RETURN e.embedding AS emb` - ); - const verifyRow = await verifyResult.getNext(); - const storedEmb = verifyRow?.emb ?? verifyRow?.[0]; - - if (storedEmb && Array.isArray(storedEmb) && storedEmb.length === 384) { - if (import.meta.env.DEV) { - console.log('โœ… Array params WORK! Stored embedding length:', storedEmb.length); - } - return { success: true }; - } else { - return { - success: false, - error: `Embedding not stored correctly. Got: ${typeof storedEmb}, length: ${storedEmb?.length}` - }; - } - } catch (error) { - const errorMsg = error instanceof Error ? error.message : String(error); - if (import.meta.env.DEV) { - console.error('โŒ Array params test failed:', errorMsg); - } - return { success: false, error: errorMsg }; - } -}; diff --git a/gitnexus/src/core/search/bm25-index.ts b/gitnexus/src/core/search/bm25-index.ts index 4b745bd72..5a64f3c12 100644 --- a/gitnexus/src/core/search/bm25-index.ts +++ b/gitnexus/src/core/search/bm25-index.ts @@ -6,6 +6,7 @@ */ import MiniSearch from 'minisearch'; +import fs from 'fs/promises'; export interface BM25Document { id: string; // File path @@ -82,7 +83,8 @@ export const buildBM25Index = (fileContents: Map): number => { searchIndex.addAll(documents); indexedDocCount = documents.length; - if (import.meta.env.DEV) { + const isDev = process.env.NODE_ENV !== 'production'; + if (isDev) { console.log(`๐Ÿ“š BM25 index built: ${indexedDocCount} documents`); } @@ -145,6 +147,46 @@ export const clearBM25Index = (): void => { indexedDocCount = 0; }; +/** + * Export the BM25 index to disk + */ +export const exportBM25Index = async (filePath: string): Promise => { + if (!searchIndex) return; + const json = JSON.stringify(searchIndex.toJSON()); + await fs.writeFile(filePath, json, 'utf-8'); +}; + +/** + * Load a BM25 index from disk + */ +export const loadBM25Index = async (filePath: string): Promise => { + try { + const json = await fs.readFile(filePath, 'utf-8'); + const data = JSON.parse(json); + searchIndex = MiniSearch.loadJSON(data, { + fields: ['content', 'name'], + storeFields: ['id'], + tokenize: (text: string) => { + const tokens = text.toLowerCase().split(/[\s\-_./\\(){}[\]<>:;,!?'"]+/); + const expanded: string[] = []; + for (const token of tokens) { + if (token.length === 0) continue; + const camelParts = token.replace(/([a-z])([A-Z])/g, '$1 $2').toLowerCase().split(' '); + expanded.push(...camelParts); + if (camelParts.length > 1) { + expanded.push(token); + } + } + return expanded.filter(t => t.length > 1 && !STOP_WORDS.has(t)); + }, + }); + indexedDocCount = searchIndex.documentCount; + return true; + } catch { + return false; + } +}; + /** * Common stop words to filter out (too common to be useful) */ diff --git a/gitnexus/src/core/search/hybrid-search.ts b/gitnexus/src/core/search/hybrid-search.ts index 247bb2783..4af6f3700 100644 --- a/gitnexus/src/core/search/hybrid-search.ts +++ b/gitnexus/src/core/search/hybrid-search.ts @@ -8,8 +8,8 @@ * production search systems. */ -import { searchBM25, isBM25Ready, type BM25SearchResult } from './bm25-index'; -import type { SemanticSearchResult } from '../embeddings/types'; +import { searchBM25, isBM25Ready, type BM25SearchResult } from './bm25-index.js'; +import type { SemanticSearchResult } from '../embeddings/types.js'; /** * RRF constant - standard value used in the literature @@ -144,6 +144,21 @@ export const formatHybridResults = (results: HybridSearchResult[]): string => { return `Found ${results.length} results:\n\n${formatted.join('\n\n')}`; }; +/** + * Execute BM25 + semantic search and merge with RRF. + * The semanticSearch function is injected to keep this module environment-agnostic. + */ +export const hybridSearch = async ( + query: string, + limit: number, + executeQuery: (cypher: string) => Promise, + semanticSearch: (executeQuery: (cypher: string) => Promise, query: string, k?: number) => Promise +): Promise => { + const bm25Results = isBM25Ready() ? searchBM25(query, limit) : []; + const semanticResults = await semanticSearch(executeQuery, query, limit); + return mergeWithRRF(bm25Results, semanticResults, limit); +}; + diff --git a/gitnexus/src/core/tree-sitter/parser-loader.ts b/gitnexus/src/core/tree-sitter/parser-loader.ts index d5224ca4e..cdca3003d 100644 --- a/gitnexus/src/core/tree-sitter/parser-loader.ts +++ b/gitnexus/src/core/tree-sitter/parser-loader.ts @@ -1,72 +1,45 @@ -import Parser from 'web-tree-sitter'; -import { SupportedLanguages } from '../../config/supported-languages'; +import Parser from 'tree-sitter'; +import JavaScript from 'tree-sitter-javascript'; +import TypeScript from 'tree-sitter-typescript'; +import Python from 'tree-sitter-python'; +import Java from 'tree-sitter-java'; +import C from 'tree-sitter-c'; +import CPP from 'tree-sitter-cpp'; +import CSharp from 'tree-sitter-c-sharp'; +import Go from 'tree-sitter-go'; +import Rust from 'tree-sitter-rust'; +import { SupportedLanguages } from '../../config/supported-languages.js'; let parser: Parser | null = null; -// Cache the compiled Language objects to avoid fetching/compiling twice -const languageCache = new Map(); +const languageMap: Record = { + [SupportedLanguages.JavaScript]: JavaScript, + [SupportedLanguages.TypeScript]: TypeScript.typescript, + [`${SupportedLanguages.TypeScript}:tsx`]: TypeScript.tsx, + [SupportedLanguages.Python]: Python, + [SupportedLanguages.Java]: Java, + [SupportedLanguages.C]: C, + [SupportedLanguages.CPlusPlus]: CPP, + [SupportedLanguages.CSharp]: CSharp, + [SupportedLanguages.Go]: Go, + [SupportedLanguages.Rust]: Rust, +}; export const loadParser = async (): Promise => { - if (parser) return parser; - - await Parser.init({ - locateFile: (scriptName: string) => { - return `/wasm/${scriptName}`; - } - }) - - parser = new Parser(); - return parser; -} - -// Get the appropriate WASM file based on language and file extension -const getWasmPath = (language: SupportedLanguages, filePath?: string): string => { - // For TypeScript, check if it's a TSX file - if (language === SupportedLanguages.TypeScript) { - if (filePath?.endsWith('.tsx')) { - return '/wasm/typescript/tree-sitter-tsx.wasm'; - } - return '/wasm/typescript/tree-sitter-typescript.wasm'; - } - - const languageFileMap: Record = { - [SupportedLanguages.JavaScript]: '/wasm/javascript/tree-sitter-javascript.wasm', - [SupportedLanguages.TypeScript]: '/wasm/typescript/tree-sitter-typescript.wasm', - [SupportedLanguages.Python]: '/wasm/python/tree-sitter-python.wasm', - [SupportedLanguages.Java]: '/wasm/java/tree-sitter-java.wasm', - [SupportedLanguages.C]: '/wasm/c/tree-sitter-c.wasm', - [SupportedLanguages.CPlusPlus]: '/wasm/cpp/tree-sitter-cpp.wasm', - [SupportedLanguages.CSharp]: '/wasm/csharp/tree-sitter-csharp.wasm', - [SupportedLanguages.Go]: '/wasm/go/tree-sitter-go.wasm', - [SupportedLanguages.Rust]: '/wasm/rust/tree-sitter-rust.wasm', - }; - - return languageFileMap[language]; + if (parser) return parser; + parser = new Parser(); + return parser; }; export const loadLanguage = async (language: SupportedLanguages, filePath?: string): Promise => { - if (!parser) await loadParser(); - const wasmPath = getWasmPath(language, filePath); - - if (languageCache.has(wasmPath)) { - parser!.setLanguage(languageCache.get(wasmPath)!); - return; - } + if (!parser) await loadParser(); + const key = language === SupportedLanguages.TypeScript && filePath?.endsWith('.tsx') + ? `${language}:tsx` + : language; - if (!wasmPath) { - console.error(`โŒ [Parser] No WASM path configured for language: ${language}`); - throw new Error(`Unsupported language: ${language}`); - } - - try { - const loadedLanguage = await Parser.Language.load(wasmPath); - languageCache.set(wasmPath, loadedLanguage); - parser!.setLanguage(loadedLanguage); - } catch (error: unknown) { - const errorMessage = error instanceof Error ? error.message : String(error); - console.error(`โŒ [Parser] Failed to load WASM grammar for ${language}`); - console.error(` WASM Path: ${wasmPath}`); - console.error(` Error: ${errorMessage}`); - throw new Error(`Failed to load grammar for ${language}: ${errorMessage}`); - } -} + const lang = languageMap[key]; + if (!lang) { + throw new Error(`Unsupported language: ${language}`); + } + parser!.setLanguage(lang); +}; diff --git a/gitnexus/src/mcp/core/bm25-index.ts b/gitnexus/src/mcp/core/bm25-index.ts new file mode 100644 index 000000000..b13d6aebd --- /dev/null +++ b/gitnexus/src/mcp/core/bm25-index.ts @@ -0,0 +1,120 @@ +/** + * BM25 Full-Text Search Index (Read-Only) + * + * Uses MiniSearch for fast keyword-based search with BM25 ranking. + * For MCP, we only load and search - not build. + */ + +import MiniSearch from 'minisearch'; +import fs from 'fs/promises'; + +export interface BM25Document { + id: string; // File path + content: string; // File content + name: string; // File name (boosted in search) +} + +export interface BM25SearchResult { + filePath: string; + score: number; + rank: number; +} + +let searchIndex: MiniSearch | null = null; +let indexedDocCount = 0; + +/** + * Common stop words to filter out + */ +const STOP_WORDS = new Set([ + 'const', 'let', 'var', 'function', 'return', 'if', 'else', 'for', 'while', + 'class', 'new', 'this', 'import', 'export', 'from', 'default', 'async', 'await', + 'try', 'catch', 'throw', 'typeof', 'instanceof', 'true', 'false', 'null', 'undefined', + 'the', 'is', 'at', 'which', 'on', 'a', 'an', 'and', 'or', 'but', 'in', 'with', + 'to', 'of', 'it', 'be', 'as', 'by', 'that', 'for', 'are', 'was', 'were', +]); + +/** + * Tokenizer for BM25 search + */ +const tokenize = (text: string): string[] => { + const tokens = text.toLowerCase().split(/[\s\-_./\\(){}[\]<>:;,!?'"]+/); + const expanded: string[] = []; + for (const token of tokens) { + if (token.length === 0) continue; + const camelParts = token.replace(/([a-z])([A-Z])/g, '$1 $2').toLowerCase().split(' '); + expanded.push(...camelParts); + if (camelParts.length > 1) { + expanded.push(token); + } + } + return expanded.filter(t => t.length > 1 && !STOP_WORDS.has(t)); +}; + +/** + * Load a BM25 index from disk + */ +export const loadBM25Index = async (filePath: string): Promise => { + try { + const json = await fs.readFile(filePath, 'utf-8'); + // MiniSearch.loadJSON expects the raw JSON string, not a parsed object + searchIndex = MiniSearch.loadJSON(json, { + fields: ['content', 'name'], + storeFields: ['id'], + tokenize, + }); + indexedDocCount = searchIndex.documentCount; + return true; + } catch { + return false; + } +}; + +/** + * Search the BM25 index + */ +export const searchBM25 = (query: string, limit: number = 20): BM25SearchResult[] => { + if (!searchIndex) { + return []; + } + + const results = searchIndex.search(query, { + fuzzy: 0.2, + prefix: true, + boost: { name: 2 }, + }); + + return results.slice(0, limit).map((r, index) => ({ + filePath: r.id, + score: r.score, + rank: index + 1, + })); +}; + +/** + * Check if the BM25 index is ready + */ +export const isBM25Ready = (): boolean => { + return searchIndex !== null && indexedDocCount > 0; +}; + +/** + * Get index statistics + */ +export const getBM25Stats = (): { documentCount: number; termCount: number } => { + if (!searchIndex) { + return { documentCount: 0, termCount: 0 }; + } + return { + documentCount: indexedDocCount, + termCount: searchIndex.termCount, + }; +}; + +/** + * Clear the index + */ +export const clearBM25Index = (): void => { + searchIndex = null; + indexedDocCount = 0; +}; diff --git a/gitnexus/src/mcp/core/embedder.ts b/gitnexus/src/mcp/core/embedder.ts new file mode 100644 index 000000000..2979ddc53 --- /dev/null +++ b/gitnexus/src/mcp/core/embedder.ts @@ -0,0 +1,110 @@ +/** + * Embedder Module (Read-Only) + * + * Singleton factory for transformers.js embedding pipeline. + * For MCP, we only need to compute query embeddings, not batch embed. + */ + +import { pipeline, env, type FeatureExtractionPipeline } from '@huggingface/transformers'; + +// Model config +const MODEL_ID = 'Snowflake/snowflake-arctic-embed-xs'; +const EMBEDDING_DIMS = 384; + +// Module-level state for singleton pattern +let embedderInstance: FeatureExtractionPipeline | null = null; +let isInitializing = false; +let initPromise: Promise | null = null; + +/** + * Initialize the embedding model (lazy, on first search) + */ +export const initEmbedder = async (): Promise => { + if (embedderInstance) { + return embedderInstance; + } + + if (isInitializing && initPromise) { + return initPromise; + } + + isInitializing = true; + + initPromise = (async () => { + try { + env.allowLocalModels = false; + + console.error('GitNexus: Loading embedding model (first search may take a moment)...'); + + // Try WebGPU first (Windows DirectX12), fall back to CPU + const devicesToTry: Array<'webgpu' | 'cpu'> = ['webgpu', 'cpu']; + + for (const device of devicesToTry) { + try { + embedderInstance = await (pipeline as any)( + 'feature-extraction', + MODEL_ID, + { + device: device, + dtype: 'fp32', + } + ); + console.error(`GitNexus: Embedding model loaded (${device})`); + return embedderInstance!; + } catch { + if (device === 'cpu') throw new Error('Failed to load embedding model'); + } + } + + throw new Error('No suitable device found'); + } catch (error) { + isInitializing = false; + initPromise = null; + embedderInstance = null; + throw error; + } finally { + isInitializing = false; + } + })(); + + return initPromise; +}; + +/** + * Check if embedder is ready + */ +export const isEmbedderReady = (): boolean => embedderInstance !== null; + +/** + * Embed a query text for semantic search + */ +export const embedQuery = async (query: string): Promise => { + const embedder = await initEmbedder(); + + const result = await embedder(query, { + pooling: 'mean', + normalize: true, + }); + + return Array.from(result.data as ArrayLike); +}; + +/** + * Get embedding dimensions + */ +export const getEmbeddingDims = (): number => EMBEDDING_DIMS; + +/** + * Cleanup embedder + */ +export const disposeEmbedder = async (): Promise => { + if (embedderInstance) { + try { + if ('dispose' in embedderInstance && typeof embedderInstance.dispose === 'function') { + await embedderInstance.dispose(); + } + } catch {} + embedderInstance = null; + initPromise = null; + } +}; diff --git a/gitnexus/src/mcp/core/kuzu-adapter.ts b/gitnexus/src/mcp/core/kuzu-adapter.ts new file mode 100644 index 000000000..80a063b05 --- /dev/null +++ b/gitnexus/src/mcp/core/kuzu-adapter.ts @@ -0,0 +1,54 @@ +/** + * KuzuDB Adapter (Read-Only) + * + * Simplified adapter for MCP that only reads from existing .gitnexus/ database. + */ + +import fs from 'fs/promises'; +import path from 'path'; +import kuzu from 'kuzu'; + +let db: kuzu.Database | null = null; +let conn: kuzu.Connection | null = null; + +export const initKuzu = async (dbPath: string): Promise => { + if (conn) return; + + // Check if database exists + try { + await fs.stat(dbPath); + } catch { + throw new Error(`KuzuDB not found at ${dbPath}. Run: gitnexus analyze`); + } + + db = new kuzu.Database(dbPath); + conn = new kuzu.Connection(db); +}; + +export const executeQuery = async (cypher: string): Promise => { + if (!conn) { + throw new Error('KuzuDB not initialized. Call initKuzu first.'); + } + + const queryResult = await conn.query(cypher); + const result = Array.isArray(queryResult) ? queryResult[0] : queryResult; + const rows = await result.getAll(); + return rows; +}; + +export const closeKuzu = async (): Promise => { + if (conn) { + try { + await conn.close(); + } catch {} + conn = null; + } + if (db) { + try { + await db.close(); + } catch {} + db = null; + } +}; + +export const isKuzuReady = (): boolean => conn !== null && db !== null; diff --git a/gitnexus/src/mcp/local/local-backend.ts b/gitnexus/src/mcp/local/local-backend.ts new file mode 100644 index 000000000..4bcd13bcf --- /dev/null +++ b/gitnexus/src/mcp/local/local-backend.ts @@ -0,0 +1,718 @@ +/** + * Local Backend + * + * Provides tool implementations using local .gitnexus/ index. + * This enables MCP to work without the browser. + */ + +import fs from 'fs/promises'; +import path from 'path'; +import { initKuzu, executeQuery, closeKuzu, isKuzuReady } from '../core/kuzu-adapter.js'; +import { loadBM25Index, searchBM25, isBM25Ready } from '../core/bm25-index.js'; +import { embedQuery, getEmbeddingDims, disposeEmbedder } from '../core/embedder.js'; + +export interface RepoMeta { + repoPath: string; + lastCommit: string; + indexedAt: string; + stats?: { + files?: number; + nodes?: number; + edges?: number; + communities?: number; + processes?: number; + }; +} + +export interface IndexedRepo { + repoPath: string; + storagePath: string; + kuzuPath: string; + bm25Path: string; + metaPath: string; + meta: RepoMeta; +} + +const GITNEXUS_DIR = '.gitnexus'; + +function getStoragePaths(repoPath: string) { + const storagePath = path.join(path.resolve(repoPath), GITNEXUS_DIR); + return { + storagePath, + kuzuPath: path.join(storagePath, 'kuzu'), + bm25Path: path.join(storagePath, 'bm25.json'), + metaPath: path.join(storagePath, 'meta.json'), + }; +} + +async function loadMeta(storagePath: string): Promise { + try { + // Verify both meta.json and kuzu exist for a valid index + const metaPath = path.join(storagePath, 'meta.json'); + const kuzuPath = path.join(storagePath, 'kuzu'); + + // Check kuzu exists (can be file or directory depending on how it was saved) + try { + await fs.stat(kuzuPath); + } catch { + return null; // kuzu doesn't exist + } + + // Load and parse meta.json + const raw = await fs.readFile(metaPath, 'utf-8'); + return JSON.parse(raw) as RepoMeta; + } catch { + return null; + } +} + +async function loadRepo(repoPath: string): Promise { + const paths = getStoragePaths(repoPath); + const meta = await loadMeta(paths.storagePath); + if (!meta) return null; + + return { + repoPath: path.resolve(repoPath), + ...paths, + meta, + }; +} + +export async function findRepo(startPath: string): Promise { + let current = path.resolve(startPath); + const root = path.parse(current).root; + + while (current !== root) { + const repo = await loadRepo(current); + if (repo) return repo; + current = path.dirname(current); + } + + return null; +} + +export interface CodebaseContext { + projectName: string; + stats: { + fileCount: number; + functionCount: number; + classCount: number; + interfaceCount: number; + methodCount: number; + communityCount: number; + processCount: number; + }; + hotspots: Array<{ + name: string; + type: string; + filePath: string; + connections: number; + }>; + folderTree: string; +} + +export class LocalBackend { + private repo: IndexedRepo | null = null; + private _context: CodebaseContext | null = null; + private initialized = false; + + async init(cwd: string): Promise { + this.repo = await findRepo(cwd); + if (!this.repo) return false; + + const stats = this.repo.meta.stats || {}; + this._context = { + projectName: path.basename(this.repo.repoPath), + stats: { + fileCount: stats.files || 0, + functionCount: stats.nodes || 0, + classCount: 0, + interfaceCount: 0, + methodCount: 0, + communityCount: stats.communities || 0, + processCount: stats.processes || 0, + }, + hotspots: [], + folderTree: '', + }; + + return true; + } + + private async ensureInitialized(): Promise { + if (this.initialized || !this.repo) return; + + await initKuzu(this.repo.kuzuPath); + await loadBM25Index(this.repo.bm25Path); + this.initialized = true; + } + + get context(): CodebaseContext | null { + return this._context; + } + + get isReady(): boolean { + return this.repo !== null; + } + + get repoPath(): string | null { + return this.repo?.repoPath || null; + } + + get storagePath(): string | null { + return this.repo?.storagePath || null; + } + + async callTool(method: string, params: any): Promise { + if (!this.repo) { + throw new Error('Repository not indexed. Run: gitnexus analyze'); + } + + switch (method) { + case 'context': + return this.getContext(); + case 'search': + return this.search(params); + case 'cypher': + return this.cypher(params); + case 'overview': + return this.overview(params); + case 'explore': + return this.explore(params); + case 'impact': + return this.impact(params); + case 'analyze': + return this.analyze(params); + default: + throw new Error(`Unknown tool: ${method}`); + } + } + + private async getContext(): Promise { + if (!this._context || !this.repo) { + return 'Repository not indexed. Run: gitnexus analyze'; + } + + const stats = this.repo.meta.stats || {}; + return [ + `# GitNexus: ${this._context.projectName}`, + '', + '## Stats', + `- Files: ${stats.files || 0}`, + `- Nodes: ${stats.nodes || 0}`, + `- Edges: ${stats.edges || 0}`, + `- Communities: ${stats.communities || 0}`, + `- Processes: ${stats.processes || 0}`, + '', + `Indexed: ${this.repo.meta.indexedAt}`, + `Commit: ${this.repo.meta.lastCommit?.slice(0, 7)}`, + '', + '## Available Tools', + '- **analyze**: Index/re-index repository', + '- **search**: Hybrid semantic + keyword search', + '- **cypher**: Graph queries (Cypher)', + '- **overview**: List communities and processes', + '- **explore**: Deep dive on symbol/cluster/process', + '- **impact**: Change impact analysis', + ].join('\n'); + } + + private async search(params: { query: string; limit?: number; depth?: string; groupByProcess?: boolean }): Promise { + await this.ensureInitialized(); + + const limit = params.limit || 10; + const query = params.query; + const depth = params.depth || 'definitions'; + + // Run BM25 and semantic search in parallel + const [bm25Results, semanticResults] = await Promise.all([ + this.bm25Search(query, limit * 2), + this.semanticSearch(query, limit * 2), + ]); + + // Merge and deduplicate results using reciprocal rank fusion + const scoreMap = new Map(); + + // BM25 results + for (let i = 0; i < bm25Results.length; i++) { + const result = bm25Results[i]; + const key = result.filePath; + const rrfScore = 1 / (60 + i); // RRF formula with k=60 + const existing = scoreMap.get(key); + if (existing) { + existing.score += rrfScore; + existing.source = 'hybrid'; + } else { + scoreMap.set(key, { score: rrfScore, source: 'bm25', data: result }); + } + } + + // Semantic results + for (let i = 0; i < semanticResults.length; i++) { + const result = semanticResults[i]; + const key = result.filePath; + const rrfScore = 1 / (60 + i); + const existing = scoreMap.get(key); + if (existing) { + existing.score += rrfScore; + existing.source = 'hybrid'; + } else { + scoreMap.set(key, { score: rrfScore, source: 'semantic', data: result }); + } + } + + // Sort by fused score and take top results + const merged = Array.from(scoreMap.entries()) + .sort((a, b) => b[1].score - a[1].score) + .slice(0, limit); + + // Enrich with graph data + const results: any[] = []; + + for (const [_, item] of merged) { + const result = item.data; + result.searchSource = item.source; + result.fusedScore = item.score; + + // Add relationships if depth is 'full' and we have a node ID + if (depth === 'full' && result.nodeId) { + try { + const relQuery = ` + MATCH (n {id: '${result.nodeId.replace(/'/g, "''")}'})-[r:CodeRelation]->(m) + RETURN r.type AS type, m.name AS targetName, m.filePath AS targetPath + LIMIT 5 + `; + const rels = await executeQuery(relQuery); + result.connections = rels.map((rel: any) => ({ + type: rel.type || rel[0], + name: rel.targetName || rel[1], + path: rel.targetPath || rel[2], + })); + } catch { + result.connections = []; + } + } + + results.push(result); + } + + return results; + } + + /** + * BM25 keyword search helper + */ + private async bm25Search(query: string, limit: number): Promise { + if (!isBM25Ready()) return []; + + const bm25Results = searchBM25(query, limit); + const results: any[] = []; + + for (const bm25Result of bm25Results) { + const fileName = bm25Result.filePath.split('/').pop() || bm25Result.filePath; + try { + const symbolQuery = ` + MATCH (n) + WHERE n.filePath CONTAINS '${fileName.replace(/'/g, "''")}' + RETURN n.id AS id, n.name AS name, labels(n)[0] AS type, n.filePath AS filePath, n.startLine AS startLine, n.endLine AS endLine + LIMIT 3 + `; + const symbols = await executeQuery(symbolQuery); + + if (symbols.length > 0) { + for (const sym of symbols) { + results.push({ + nodeId: sym.id || sym[0], + name: sym.name || sym[1], + type: sym.type || sym[2], + filePath: sym.filePath || sym[3], + startLine: sym.startLine || sym[4], + endLine: sym.endLine || sym[5], + bm25Score: bm25Result.score, + }); + } + } else { + results.push({ + name: fileName, + type: 'File', + filePath: bm25Result.filePath, + bm25Score: bm25Result.score, + }); + } + } catch { + results.push({ + name: fileName, + type: 'File', + filePath: bm25Result.filePath, + bm25Score: bm25Result.score, + }); + } + } + + return results; + } + + /** + * Semantic vector search helper + */ + private async semanticSearch(query: string, limit: number): Promise { + try { + // Embed the query + const queryVec = await embedQuery(query); + const dims = getEmbeddingDims(); + const queryVecStr = `[${queryVec.join(',')}]`; + + // Query vector index + const vectorQuery = ` + CALL QUERY_VECTOR_INDEX('CodeEmbedding', 'code_embedding_idx', + CAST(${queryVecStr} AS FLOAT[${dims}]), ${limit}) + YIELD node AS emb, distance + WITH emb, distance + WHERE distance < 0.6 + RETURN emb.nodeId AS nodeId, distance + ORDER BY distance + `; + + const embResults = await executeQuery(vectorQuery); + + if (embResults.length === 0) return []; + + // Get metadata for each result + const results: any[] = []; + + for (const embRow of embResults) { + const nodeId = embRow.nodeId ?? embRow[0]; + const distance = embRow.distance ?? embRow[1]; + + // Extract label from node ID + const labelEndIdx = nodeId.indexOf(':'); + const label = labelEndIdx > 0 ? nodeId.substring(0, labelEndIdx) : 'Unknown'; + + try { + const nodeQuery = label === 'File' + ? `MATCH (n:File {id: '${nodeId.replace(/'/g, "''")}'}) RETURN n.name AS name, n.filePath AS filePath` + : `MATCH (n:${label} {id: '${nodeId.replace(/'/g, "''")}'}) RETURN n.name AS name, n.filePath AS filePath, n.startLine AS startLine, n.endLine AS endLine`; + + const nodeRows = await executeQuery(nodeQuery); + if (nodeRows.length > 0) { + const nodeRow = nodeRows[0]; + results.push({ + nodeId, + name: nodeRow.name ?? nodeRow[0] ?? '', + type: label, + filePath: nodeRow.filePath ?? nodeRow[1] ?? '', + distance, + startLine: label !== 'File' ? (nodeRow.startLine ?? nodeRow[2]) : undefined, + endLine: label !== 'File' ? (nodeRow.endLine ?? nodeRow[3]) : undefined, + }); + } + } catch {} + } + + return results; + } catch (err: any) { + // Semantic search unavailable (no embeddings or model not loaded) + console.error('GitNexus: Semantic search unavailable -', err.message); + return []; + } + } + + private async cypher(params: { query: string }): Promise { + await this.ensureInitialized(); + + if (!isKuzuReady()) { + return { error: 'KuzuDB not ready. Index may be corrupted.' }; + } + + try { + const result = await executeQuery(params.query); + return result; + } catch (err: any) { + return { error: err.message || 'Query failed' }; + } + } + + private async overview(params: { showClusters?: boolean; showProcesses?: boolean; limit?: number }): Promise { + await this.ensureInitialized(); + + const limit = params.limit || 20; + const result: any = { + repoPath: this.repo!.repoPath, + stats: this.repo!.meta.stats, + indexedAt: this.repo!.meta.indexedAt, + lastCommit: this.repo!.meta.lastCommit, + }; + + if (params.showClusters !== false) { + try { + const clusters = await executeQuery(` + MATCH (c:Community) + RETURN c.id AS id, c.label AS label, c.heuristicLabel AS heuristicLabel, c.cohesion AS cohesion, c.symbolCount AS symbolCount + ORDER BY c.symbolCount DESC + LIMIT ${limit} + `); + result.clusters = clusters.map((c: any) => ({ + id: c.id || c[0], + label: c.label || c[1], + heuristicLabel: c.heuristicLabel || c[2], + cohesion: c.cohesion || c[3], + symbolCount: c.symbolCount || c[4], + })); + } catch { + result.clusters = []; + } + } + + if (params.showProcesses !== false) { + try { + const processes = await executeQuery(` + MATCH (p:Process) + RETURN p.id AS id, p.label AS label, p.heuristicLabel AS heuristicLabel, p.processType AS processType, p.stepCount AS stepCount + ORDER BY p.stepCount DESC + LIMIT ${limit} + `); + result.processes = processes.map((p: any) => ({ + id: p.id || p[0], + label: p.label || p[1], + heuristicLabel: p.heuristicLabel || p[2], + processType: p.processType || p[3], + stepCount: p.stepCount || p[4], + })); + } catch { + result.processes = []; + } + } + + return result; + } + + private async explore(params: { name: string; type: 'symbol' | 'cluster' | 'process' }): Promise { + await this.ensureInitialized(); + + const { name, type } = params; + + if (type === 'symbol') { + // Find symbol and its context + const symbolQuery = ` + MATCH (n) + WHERE n.name = '${name.replace(/'/g, "''")}' + RETURN n.id AS id, n.name AS name, labels(n)[0] AS type, n.filePath AS filePath, n.startLine AS startLine, n.endLine AS endLine + LIMIT 1 + `; + const symbols = await executeQuery(symbolQuery); + if (symbols.length === 0) return { error: `Symbol '${name}' not found` }; + + const sym = symbols[0]; + const symId = sym.id || sym[0]; + + // Get callers + const callersQuery = ` + MATCH (caller)-[:CodeRelation {type: 'CALLS'}]->(n {id: '${symId}'}) + RETURN caller.name AS name, caller.filePath AS filePath + LIMIT 10 + `; + const callers = await executeQuery(callersQuery); + + // Get callees + const calleesQuery = ` + MATCH (n {id: '${symId}'})-[:CodeRelation {type: 'CALLS'}]->(callee) + RETURN callee.name AS name, callee.filePath AS filePath + LIMIT 10 + `; + const callees = await executeQuery(calleesQuery); + + // Get community + const communityQuery = ` + MATCH (n {id: '${symId}'})-[:CodeRelation {type: 'MEMBER_OF'}]->(c:Community) + RETURN c.label AS label, c.heuristicLabel AS heuristicLabel + LIMIT 1 + `; + const communities = await executeQuery(communityQuery); + + return { + symbol: { + id: symId, + name: sym.name || sym[1], + type: sym.type || sym[2], + filePath: sym.filePath || sym[3], + startLine: sym.startLine || sym[4], + endLine: sym.endLine || sym[5], + }, + callers: callers.map((c: any) => ({ name: c.name || c[0], filePath: c.filePath || c[1] })), + callees: callees.map((c: any) => ({ name: c.name || c[0], filePath: c.filePath || c[1] })), + community: communities.length > 0 ? { + label: communities[0].label || communities[0][0], + heuristicLabel: communities[0].heuristicLabel || communities[0][1], + } : null, + }; + } + + if (type === 'cluster') { + const clusterQuery = ` + MATCH (c:Community) + WHERE c.label = '${name.replace(/'/g, "''")}' OR c.heuristicLabel = '${name.replace(/'/g, "''")}' + RETURN c.id AS id, c.label AS label, c.heuristicLabel AS heuristicLabel, c.cohesion AS cohesion, c.symbolCount AS symbolCount + LIMIT 1 + `; + const clusters = await executeQuery(clusterQuery); + if (clusters.length === 0) return { error: `Cluster '${name}' not found` }; + + const cluster = clusters[0]; + const clusterId = cluster.id || cluster[0]; + + const membersQuery = ` + MATCH (n)-[:CodeRelation {type: 'MEMBER_OF'}]->(c {id: '${clusterId}'}) + RETURN n.name AS name, labels(n)[0] AS type, n.filePath AS filePath + LIMIT 20 + `; + const members = await executeQuery(membersQuery); + + return { + cluster: { + id: clusterId, + label: cluster.label || cluster[1], + heuristicLabel: cluster.heuristicLabel || cluster[2], + cohesion: cluster.cohesion || cluster[3], + symbolCount: cluster.symbolCount || cluster[4], + }, + members: members.map((m: any) => ({ + name: m.name || m[0], + type: m.type || m[1], + filePath: m.filePath || m[2], + })), + }; + } + + if (type === 'process') { + const processQuery = ` + MATCH (p:Process) + WHERE p.label = '${name.replace(/'/g, "''")}' OR p.heuristicLabel = '${name.replace(/'/g, "''")}' + RETURN p.id AS id, p.label AS label, p.heuristicLabel AS heuristicLabel, p.processType AS processType, p.stepCount AS stepCount, p.entryPointId AS entryPointId, p.terminalId AS terminalId + LIMIT 1 + `; + const processes = await executeQuery(processQuery); + if (processes.length === 0) return { error: `Process '${name}' not found` }; + + const proc = processes[0]; + const procId = proc.id || proc[0]; + + const stepsQuery = ` + MATCH (n)-[r:CodeRelation {type: 'STEP_IN_PROCESS'}]->(p {id: '${procId}'}) + RETURN n.name AS name, labels(n)[0] AS type, n.filePath AS filePath, r.step AS step + ORDER BY r.step + `; + const steps = await executeQuery(stepsQuery); + + return { + process: { + id: procId, + label: proc.label || proc[1], + heuristicLabel: proc.heuristicLabel || proc[2], + processType: proc.processType || proc[3], + stepCount: proc.stepCount || proc[4], + }, + steps: steps.map((s: any) => ({ + step: s.step || s[3], + name: s.name || s[0], + type: s.type || s[1], + filePath: s.filePath || s[2], + })), + }; + } + + return { error: 'Invalid type. Use: symbol, cluster, or process' }; + } + + private async impact(params: { target: string; direction: 'upstream' | 'downstream'; maxDepth?: number }): Promise { + await this.ensureInitialized(); + + const { target, direction } = params; + const maxDepth = params.maxDepth || 3; + + // Find target symbol + const targetQuery = ` + MATCH (n) + WHERE n.name = '${target.replace(/'/g, "''")}' + RETURN n.id AS id, n.name AS name, labels(n)[0] AS type, n.filePath AS filePath + LIMIT 1 + `; + const targets = await executeQuery(targetQuery); + if (targets.length === 0) return { error: `Target '${target}' not found` }; + + const sym = targets[0]; + const symId = sym.id || sym[0]; + + // BFS to find impacted nodes + const impacted: any[] = []; + const visited = new Set([symId]); + let frontier = [symId]; + + for (let depth = 1; depth <= maxDepth && frontier.length > 0; depth++) { + const nextFrontier: string[] = []; + + for (const nodeId of frontier) { + const query = direction === 'upstream' + ? `MATCH (caller)-[r:CodeRelation]->(n {id: '${nodeId}'}) WHERE r.type IN ['CALLS', 'IMPORTS', 'EXTENDS', 'IMPLEMENTS'] RETURN caller.id AS id, caller.name AS name, labels(caller)[0] AS type, caller.filePath AS filePath, r.type AS relType, r.confidence AS confidence` + : `MATCH (n {id: '${nodeId}'})-[r:CodeRelation]->(callee) WHERE r.type IN ['CALLS', 'IMPORTS', 'EXTENDS', 'IMPLEMENTS'] RETURN callee.id AS id, callee.name AS name, labels(callee)[0] AS type, callee.filePath AS filePath, r.type AS relType, r.confidence AS confidence`; + + const related = await executeQuery(query); + + for (const rel of related) { + const relId = rel.id || rel[0]; + if (!visited.has(relId)) { + visited.add(relId); + nextFrontier.push(relId); + impacted.push({ + depth, + id: relId, + name: rel.name || rel[1], + type: rel.type || rel[2], + filePath: rel.filePath || rel[3], + relationType: rel.relType || rel[4], + confidence: rel.confidence || rel[5] || 1.0, + }); + } + } + } + + frontier = nextFrontier; + } + + // Group by depth + const grouped: Record = {}; + for (const item of impacted) { + if (!grouped[item.depth]) grouped[item.depth] = []; + grouped[item.depth].push(item); + } + + return { + target: { + id: symId, + name: sym.name || sym[1], + type: sym.type || sym[2], + filePath: sym.filePath || sym[3], + }, + direction, + impactedCount: impacted.length, + byDepth: grouped, + }; + } + + private async analyze(params: { path?: string; force?: boolean }): Promise { + const targetPath = params.path ? path.resolve(params.path) : process.cwd(); + + return { + action: 'analyze', + targetPath, + message: `To index this repository, run:\n\n cd ${targetPath}\n gitnexus analyze${params.force ? ' --force' : ''}\n\nThis will create a .gitnexus/ folder with the knowledge graph.`, + }; + } + + async disconnect(): Promise { + closeKuzu(); + await disposeEmbedder(); + this.repo = null; + this._context = null; + this.initialized = false; + } +} diff --git a/gitnexus/src/mcp/server.ts b/gitnexus/src/mcp/server.ts new file mode 100644 index 000000000..3e77a6fde --- /dev/null +++ b/gitnexus/src/mcp/server.ts @@ -0,0 +1,180 @@ +/** + * MCP Server + * + * Model Context Protocol server that runs on stdio. + * External AI tools (Cursor, Claude) spawn this process and + * communicate via stdin/stdout using the MCP protocol. + * + * Tools: context, search, cypher, overview, explore, impact, analyze + */ + +import { Server } from '@modelcontextprotocol/sdk/server/index.js'; +import { StdioServerTransport } from '@modelcontextprotocol/sdk/server/stdio.js'; +import { + CallToolRequestSchema, + ListToolsRequestSchema, + ListResourcesRequestSchema, + ReadResourceRequestSchema, +} from '@modelcontextprotocol/sdk/types.js'; +import { GITNEXUS_TOOLS } from './tools.js'; +import type { LocalBackend, CodebaseContext } from './local/local-backend.js'; + +/** + * Format context as markdown for the resource + */ +function formatContextAsMarkdown(context: CodebaseContext): string { + const { projectName, stats } = context; + + const lines: string[] = []; + + lines.push(`# GitNexus: ${projectName}`); + lines.push(''); + lines.push('## Stats'); + lines.push(`- Files: ${stats.fileCount}`); + lines.push(`- Functions: ${stats.functionCount}`); + if (stats.communityCount > 0) lines.push(`- Communities: ${stats.communityCount}`); + if (stats.processCount > 0) lines.push(`- Processes: ${stats.processCount}`); + lines.push(''); + + lines.push('## Available Tools'); + lines.push(''); + lines.push('- **context**: Codebase overview and stats'); + lines.push('- **search**: Hybrid semantic + keyword search'); + lines.push('- **cypher**: Execute Cypher queries on graph'); + lines.push('- **overview**: List communities and processes'); + lines.push('- **explore**: Deep dive on symbol/cluster/process'); + lines.push('- **impact**: Change impact analysis'); + lines.push('- **analyze**: Index/re-index repository'); + lines.push(''); + + lines.push('## Graph Schema'); + lines.push(''); + lines.push('**Nodes**: File, Function, Class, Interface, Method, Community, Process'); + lines.push(''); + lines.push('**Relations**: CALLS, IMPORTS, EXTENDS, IMPLEMENTS, DEFINES, MEMBER_OF, STEP_IN_PROCESS'); + + return lines.join('\n'); +} + +export async function startMCPServer(backend: LocalBackend): Promise { + const server = new Server( + { + name: 'gitnexus', + version: '0.2.0', + }, + { + capabilities: { + tools: {}, + resources: {}, + }, + } + ); + + // Handle list resources request + server.setRequestHandler(ListResourcesRequestSchema, async () => { + const context = backend.context; + + if (!context) { + return { resources: [] }; + } + + return { + resources: [ + { + uri: 'gitnexus://codebase/context', + name: `GitNexus: ${context.projectName}`, + description: `Codebase context for ${context.projectName} (${context.stats.fileCount} files)`, + mimeType: 'text/markdown', + }, + ], + }; + }); + + // Handle read resource request + server.setRequestHandler(ReadResourceRequestSchema, async (request) => { + const { uri } = request.params; + + if (uri === 'gitnexus://codebase/context') { + const context = backend.context; + + if (!context) { + return { + contents: [ + { + uri, + mimeType: 'text/plain', + text: 'No codebase loaded.', + }, + ], + }; + } + + return { + contents: [ + { + uri, + mimeType: 'text/markdown', + text: formatContextAsMarkdown(context), + }, + ], + }; + } + + throw new Error(`Unknown resource: ${uri}`); + }); + + // Handle list tools request + server.setRequestHandler(ListToolsRequestSchema, async () => ({ + tools: GITNEXUS_TOOLS.map((tool) => ({ + name: tool.name, + description: tool.description, + inputSchema: tool.inputSchema, + })), + })); + + // Handle tool calls + server.setRequestHandler(CallToolRequestSchema, async (request) => { + const { name, arguments: args } = request.params; + + try { + const result = await backend.callTool(name, args); + + return { + content: [ + { + type: 'text', + text: typeof result === 'string' ? result : JSON.stringify(result, null, 2), + }, + ], + }; + } catch (error) { + const message = error instanceof Error ? error.message : 'Unknown error'; + return { + content: [ + { + type: 'text', + text: `Error: ${message}`, + }, + ], + isError: true, + }; + } + }); + + // Connect to stdio transport + const transport = new StdioServerTransport(); + await server.connect(transport); + + // Handle graceful shutdown + process.on('SIGINT', async () => { + await backend.disconnect(); + await server.close(); + process.exit(0); + }); + + process.on('SIGTERM', async () => { + await backend.disconnect(); + await server.close(); + process.exit(0); + }); +} diff --git a/gitnexus/src/mcp/tools.ts b/gitnexus/src/mcp/tools.ts new file mode 100644 index 000000000..f4d6e997c --- /dev/null +++ b/gitnexus/src/mcp/tools.ts @@ -0,0 +1,191 @@ +/** + * MCP Tool Definitions + * + * Defines the tools that GitNexus exposes to external AI agents. + * Only includes tools that provide unique value over native IDE capabilities. + */ + +export interface ToolDefinition { + name: string; + description: string; + inputSchema: { + type: 'object'; + properties: Record; + required: string[]; + }; +} + +export const GITNEXUS_TOOLS: ToolDefinition[] = [ + { + name: 'analyze', + description: `Index or re-index the current repository. + +Creates .gitnexus/ in repo root with: +- Knowledge graph (functions, classes, calls, imports) +- BM25 search index +- Community detection (Leiden) +- Process tracing + +Run this when: +- First time using GitNexus on a repo +- After major code changes +- When 'not indexed' error appears`, + inputSchema: { + type: 'object', + properties: { + path: { type: 'string', description: 'Repo path (default: current directory)' }, + force: { type: 'boolean', description: 'Re-index even if exists', default: false }, + skipEmbeddings: { type: 'boolean', description: 'Skip embedding generation (faster)', default: false }, + }, + required: [], + }, + }, + { + name: 'context', + description: `Get GitNexus codebase context. CALL THIS FIRST before using other tools. + +Returns: +- Project name and stats (files, functions, classes) +- Hotspots (most connected/important nodes) +- Communities and processes count +- Tool usage guidance + +ALWAYS call this first to understand the codebase before searching or querying.`, + inputSchema: { + type: 'object', + properties: {}, + required: [], + }, + }, + { + name: 'search', + description: `Hybrid search (keyword + semantic) across the codebase. +Returns code nodes with their graph connections, grouped by process. + +BETTER THAN IDE search because: +- Process-aware grouping (shows execution flows) +- Cluster context (which functional area) +- Relationship data (callers/callees) + +RETURNS: Array of {name, type, filePath, code, connections[], cluster, processes[]}`, + inputSchema: { + type: 'object', + properties: { + query: { type: 'string', description: 'Natural language or keyword search query' }, + limit: { type: 'number', description: 'Max results to return', default: 10 }, + depth: { type: 'string', description: 'Result detail: "definitions" (symbols only) or "full" (with relationships)', enum: ['definitions', 'full'], default: 'definitions' }, + groupByProcess: { type: 'boolean', description: 'Group results by process', default: true }, + }, + required: ['query'], + }, + }, + { + name: 'cypher', + description: `Execute Cypher query against the code knowledge graph. + +SCHEMA: +- Nodes: File, Folder, Function, Class, Interface, Method, Community, Process +- Edges via CodeRelation.type: CALLS, IMPORTS, EXTENDS, IMPLEMENTS, CONTAINS, DEFINES, MEMBER_OF, STEP_IN_PROCESS + +EXAMPLES: +โ€ข Find callers of a function: + MATCH (a)-[:CodeRelation {type: 'CALLS'}]->(b:Function {name: "validateUser"}) RETURN a.name, a.filePath + +โ€ข Find all functions in a community: + MATCH (f:Function)-[:CodeRelation {type: 'MEMBER_OF'}]->(c:Community {label: "Auth"}) RETURN f.name + +โ€ข Find steps in a process: + MATCH (s)-[r:CodeRelation {type: 'STEP_IN_PROCESS'}]->(p:Process {label: "UserLogin"}) RETURN s.name, r.step ORDER BY r.step + +TIPS: +- All relationships use CodeRelation table with 'type' property +- Community = functional cluster detected by Leiden algorithm +- Process = execution flow trace from entry point to terminal`, + inputSchema: { + type: 'object', + properties: { + query: { type: 'string', description: 'Cypher query to execute' }, + }, + required: ['query'], + }, + }, + { + name: 'explore', + description: `Deep dive on a symbol, cluster, or process. + +TYPE: symbol | cluster | process + +For SYMBOL: Shows cluster membership, process participation, callers/callees +For CLUSTER: Shows members, cohesion score, processes touching it +For PROCESS: Shows step-by-step trace, clusters traversed, entry/terminal points + +Use after search to understand context of a specific node.`, + inputSchema: { + type: 'object', + properties: { + name: { type: 'string', description: 'Name of symbol, cluster, or process to explore' }, + type: { type: 'string', description: 'Type: symbol, cluster, or process' }, + }, + required: ['name', 'type'], + }, + }, + { + name: 'overview', + description: `Get codebase map showing all clusters and processes. + +Returns: +- All communities (clusters) with member counts and cohesion scores +- All processes with step counts and types (intra/cross-community) +- High-level architectural view + +Use to understand overall codebase structure before diving deep.`, + inputSchema: { + type: 'object', + properties: { + showProcesses: { type: 'boolean', description: 'Include process list', default: true }, + showClusters: { type: 'boolean', description: 'Include cluster list', default: true }, + limit: { type: 'number', description: 'Max items per category', default: 20 }, + }, + required: [], + }, + }, + { + name: 'impact', + description: `Analyze the impact of changing a code element. +Returns all nodes affected by modifying the target, with distance, edge type, and confidence. + +USE BEFORE making changes to understand ripple effects. + +Output includes: +- Affected processes (with step positions) +- Affected clusters (direct/indirect) +- Risk assessment (critical/high/medium/low) +- Callers/dependents grouped by depth + +EdgeType: CALLS, IMPORTS, EXTENDS, IMPLEMENTS +Confidence: 100% = certain, <80% = fuzzy match + +Depth groups: +- d=1: WILL BREAK (direct callers/importers) +- d=2: LIKELY AFFECTED (indirect) +- d=3: MAY NEED TESTING (transitive)`, + inputSchema: { + type: 'object', + properties: { + target: { type: 'string', description: 'Name of function, class, or file to analyze' }, + direction: { type: 'string', description: 'upstream (what depends on this) or downstream (what this depends on)' }, + maxDepth: { type: 'number', description: 'Max relationship depth (default: 3)', default: 3 }, + relationTypes: { type: 'array', items: { type: 'string' }, description: 'Filter: CALLS, IMPORTS, EXTENDS, IMPLEMENTS (default: usage-based)' }, + includeTests: { type: 'boolean', description: 'Include test files (default: false)' }, + minConfidence: { type: 'number', description: 'Minimum confidence 0-1 (default: 0.7)' }, + }, + required: ['target', 'direction'], + }, + }, +]; diff --git a/gitnexus-cli/src/server/api.ts b/gitnexus/src/server/api.ts similarity index 100% rename from gitnexus-cli/src/server/api.ts rename to gitnexus/src/server/api.ts diff --git a/gitnexus-cli/src/storage/git.ts b/gitnexus/src/storage/git.ts similarity index 100% rename from gitnexus-cli/src/storage/git.ts rename to gitnexus/src/storage/git.ts diff --git a/gitnexus-cli/src/storage/repo-manager.ts b/gitnexus/src/storage/repo-manager.ts similarity index 100% rename from gitnexus-cli/src/storage/repo-manager.ts rename to gitnexus/src/storage/repo-manager.ts diff --git a/gitnexus/src/types/pipeline.ts b/gitnexus/src/types/pipeline.ts index 123be720b..c8848d562 100644 --- a/gitnexus/src/types/pipeline.ts +++ b/gitnexus/src/types/pipeline.ts @@ -1,6 +1,6 @@ -import { GraphNode, GraphRelationship, KnowledgeGraph } from '../core/graph/types'; -import { CommunityDetectionResult } from '../core/ingestion/community-processor'; -import { ProcessDetectionResult } from '../core/ingestion/process-processor'; +import { GraphNode, GraphRelationship, KnowledgeGraph } from '../core/graph/types.js'; +import { CommunityDetectionResult } from '../core/ingestion/community-processor.js'; +import { ProcessDetectionResult } from '../core/ingestion/process-processor.js'; export type PipelinePhase = 'idle' | 'extracting' | 'structure' | 'parsing' | 'imports' | 'calls' | 'heritage' | 'communities' | 'processes' | 'enriching' | 'complete' | 'error'; diff --git a/gitnexus/tsconfig.json b/gitnexus/tsconfig.json index 1ffef600d..7fc8c33ce 100644 --- a/gitnexus/tsconfig.json +++ b/gitnexus/tsconfig.json @@ -1,7 +1,24 @@ { - "files": [], - "references": [ - { "path": "./tsconfig.app.json" }, - { "path": "./tsconfig.node.json" } + "compilerOptions": { + "target": "ES2022", + "lib": [ + "ES2022" + ], + "module": "NodeNext", + "moduleResolution": "NodeNext", + "outDir": "dist", + "rootDir": "src", + "strict": false, + "esModuleInterop": true, + "skipLibCheck": true, + "resolveJsonModule": true, + "forceConsistentCasingInFileNames": true, + "declaration": true, + "types": [ + "node" + ] + }, + "include": [ + "src/**/*" ] -} +} \ No newline at end of file