fix(ux): raise file size limit to 2MB, quiet warning output

- Raise MAX_FILE_SIZE from 512KB to 2MB to capture more real source files
- Replace verbose per-warning output with single summary line
- Soften skip message wording ("likely generated/vendored")

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

gitnexus/package.json

@@ -1,6 +1,6 @@
 {
   "name": "gitnexus",
-  "version": "1.3.1",
+  "version": "1.3.2",
   "description": "Graph-powered code intelligence for AI agents. Index any codebase, query via MCP or CLI.",
   "author": "Abhigyan Patwari",
   "license": "PolyForm-Noncommercial-1.0.0",

gitnexus/src/cli/analyze.ts

@@ -343,12 +343,13 @@ export const analyzeCommand = async (
     console.log(`  Hooks: ${hookResult.message}`);
   }
 
-  // Show warnings (missing schema pairs, etc.) after the clean output
+  // Show a quiet summary if some edge types needed fallback insertion
   if (kuzuWarnings.length > 0) {
-    console.log(`\n  Warnings (${kuzuWarnings.length}):`);
-    for (const w of kuzuWarnings) {
-      console.log(`    ${w}`);
-    }
+    const totalFallback = kuzuWarnings.reduce((sum, w) => {
+      const m = w.match(/\((\d+) edges\)/);
+      return sum + (m ? parseInt(m[1]) : 0);
+    }, 0);
+    console.log(`  Note: ${totalFallback} edges across ${kuzuWarnings.length} types inserted via fallback (schema will be updated in next release)`);
   }
 
   try {

gitnexus/src/core/ingestion/filesystem-walker.ts

@@ -21,8 +21,8 @@ export interface FilePath {
 
 const READ_CONCURRENCY = 32;
 
-/** Skip files larger than 512KB — they're usually generated/vendored and crash tree-sitter */
-const MAX_FILE_SIZE = 512 * 1024;
+/** Skip files larger than 2MB — covers all real source files, excludes minified bundles/generated code */
+const MAX_FILE_SIZE = 2 * 1024 * 1024;
 
 /**
  * Phase 1: Scan repository — stat files to get paths + sizes, no content loaded.
@@ -69,7 +69,7 @@ export const walkRepositoryPaths = async (
   }
 
   if (skippedLarge > 0) {
-    console.warn(`  Skipped ${skippedLarge} files larger than ${MAX_FILE_SIZE / 1024}KB`);
+    console.warn(`  Skipped ${skippedLarge} files larger than ${Math.round(MAX_FILE_SIZE / 1024 / 1024)}MB (likely generated/vendored)`);
   }
 
   return entries;

gitnexus/src/core/ingestion/parsing-processor.ts

@@ -207,7 +207,7 @@ const processParsingSequential = async (
     if (!language) continue;
 
     // Skip very large files — they can crash tree-sitter or cause OOM
-    if (file.content.length > 512 * 1024) continue;
+    if (file.content.length > 2 * 1024 * 1024) continue;
 
     await loadLanguage(language, file.path);
 

gitnexus/src/core/ingestion/workers/parse-worker.ts

@@ -426,7 +426,7 @@ const processFileGroup = (
 
   for (const file of files) {
     // Skip very large files — they can crash tree-sitter or cause OOM
-    if (file.content.length > 512 * 1024) continue;
+    if (file.content.length > 2 * 1024 * 1024) continue;
 
     let tree;
     try {